BLASTX nr result
ID: Cinnamomum23_contig00017248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00017248
(625 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 69 1e-09
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 69 2e-09
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 69 2e-09
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 67 6e-09
emb|CBI18915.3| unnamed protein product [Vitis vinifera] 66 1e-08
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 66 1e-08
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 66 2e-08
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 66 2e-08
ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 ... 65 2e-08
ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 ... 65 2e-08
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 65 2e-08
ref|XP_010113285.1| DNA-directed RNA polymerase II subunit rpb1 ... 65 4e-08
ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II su... 64 5e-08
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 64 5e-08
ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II su... 64 6e-08
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 64 6e-08
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 64 6e-08
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 64 6e-08
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 64 8e-08
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 69.3 bits (168), Expect = 1e-09
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDK 515
PQYSPSAGYSPTAPGYSPSST QYTPQ+SN+D++ +
Sbjct: 1806 PQYSPSAGYSPTAPGYSPSSTSQYTPQMSNKDEESTR 1842
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 69.3 bits (168), Expect = 1e-09
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDK 515
PQYSPSAGYSPTAPGYSPSST QYTPQ+SN+D++ +
Sbjct: 1806 PQYSPSAGYSPTAPGYSPSSTSQYTPQMSNKDEESTR 1842
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 68.9 bits (167), Expect = 2e-09
Identities = 29/34 (85%), Positives = 33/34 (97%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKD 524
PQYSPSAGYSPTAPGYSPSST QYTPQ+SN+D++
Sbjct: 1806 PQYSPSAGYSPTAPGYSPSSTSQYTPQMSNKDEE 1839
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 68.9 bits (167), Expect = 2e-09
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDK 527
PQYSPSAGYSPTAPGYSPSST QYTPQLSN+D+
Sbjct: 1812 PQYSPSAGYSPTAPGYSPSSTSQYTPQLSNKDE 1844
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 67.4 bits (163), Expect = 6e-09
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDK 515
PQYSPSAGYSPT+PGYSPSST QYTPQ+SN D++ +
Sbjct: 1796 PQYSPSAGYSPTSPGYSPSSTSQYTPQMSNEDEESTR 1832
>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
Length = 1565
Score = 66.2 bits (160), Expect = 1e-08
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRD 530
PQYSPSAGYSP+APGYSPSST QYTPQ+SN+D
Sbjct: 1529 PQYSPSAGYSPSAPGYSPSSTSQYTPQMSNKD 1560
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 66.2 bits (160), Expect = 1e-08
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRD 530
PQYSPSAGYSP+APGYSPSST QYTPQ+SN+D
Sbjct: 1812 PQYSPSAGYSPSAPGYSPSSTSQYTPQMSNKD 1843
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 65.9 bits (159), Expect = 2e-08
Identities = 30/41 (73%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRD---KDEDKN 512
PQYSPSAGYSPTAPGYSPSST QYTPQ S++D + +D+N
Sbjct: 1826 PQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRN 1866
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 65.9 bits (159), Expect = 2e-08
Identities = 30/41 (73%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRD---KDEDKN 512
PQYSPSAGYSPTAPGYSPSST QYTPQ S++D + +D+N
Sbjct: 1795 PQYSPSAGYSPTAPGYSPSSTSQYTPQTSDKDDRSRKDDRN 1835
>ref|XP_007046588.1| DNA-directed RNA polymerase II subunit RPB1 isoform 5 [Theobroma
cacao] gi|508698849|gb|EOX90745.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 5 [Theobroma cacao]
Length = 1512
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+APGYSPSST QYTPQ SN+D K+
Sbjct: 1464 PQYSPSAGYSPSAPGYSPSSTSQYTPQTSNKDDRATKD 1501
>ref|XP_007046587.1| DNA-directed RNA polymerase II subunit RPB1 isoform 4 [Theobroma
cacao] gi|508698848|gb|EOX90744.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 4 [Theobroma cacao]
Length = 1511
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+APGYSPSST QYTPQ SN+D K+
Sbjct: 1463 PQYSPSAGYSPSAPGYSPSSTSQYTPQTSNKDDRATKD 1500
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 65.5 bits (158), Expect = 2e-08
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+APGYSPSST QYTPQ SN+D K+
Sbjct: 1813 PQYSPSAGYSPSAPGYSPSSTSQYTPQTSNKDDRATKD 1850
>ref|XP_010113285.1| DNA-directed RNA polymerase II subunit rpb1 [Morus notabilis]
gi|587949090|gb|EXC35292.1| DNA-directed RNA polymerase
II subunit rpb1 [Morus notabilis]
Length = 1866
Score = 64.7 bits (156), Expect = 4e-08
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+ PGYSPSST QYTPQ S++D +D++
Sbjct: 1827 PQYSPSAGYSPSQPGYSPSSTSQYTPQTSDKDDKDDRS 1864
>ref|XP_008242006.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Prunus mume]
gi|645273710|ref|XP_008242007.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Prunus mume]
Length = 1844
Score = 64.3 bits (155), Expect = 5e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+ PGYSPSST QYTPQ S +D +D++
Sbjct: 1805 PQYSPSAGYSPSQPGYSPSSTSQYTPQTSEKDTKDDRS 1842
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 64.3 bits (155), Expect = 5e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+ PGYSPSST QYTPQ S +D +D++
Sbjct: 1805 PQYSPSAGYSPSQPGYSPSSTSQYTPQTSEKDTKDDRS 1842
>ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 63.9 bits (154), Expect = 6e-08
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKNG 509
PQYSPSAGYSP+APGYSPSST QYTPQ S + + K+G
Sbjct: 1795 PQYSPSAGYSPSAPGYSPSSTSQYTPQTSTKGDRDKKDG 1833
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 63.9 bits (154), Expect = 6e-08
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+APGYSPSST QYTP++S RD K+
Sbjct: 1798 PQYSPSAGYSPSAPGYSPSSTSQYTPRVSERDNKSVKD 1835
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca] gi|764511805|ref|XP_011461993.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 [Fragaria vesca
subsp. vesca]
Length = 1842
Score = 63.9 bits (154), Expect = 6e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDKDEDKN 512
PQYSPSAGYSP+ PGYSPSST QYTPQ S +D +D++
Sbjct: 1803 PQYSPSAGYSPSQPGYSPSSTSQYTPQTSEKDVKDDRS 1840
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum]
Length = 1846
Score = 63.9 bits (154), Expect = 6e-08
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLSNRDK---DEDKNG 509
PQYSPSAGYSP+APGYSPSST QYTP++S RD +DK G
Sbjct: 1805 PQYSPSAGYSPSAPGYSPSSTSQYTPRVSERDNRSVKDDKAG 1846
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 63.5 bits (153), Expect = 8e-08
Identities = 30/41 (73%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Frame = -1
Query: 625 PQYSPSAGYSPTAPGYSPSSTGQYTPQLS---NRDKDEDKN 512
PQYSPSAGYSP+APGYSPSST QYTPQ S +RDK + K+
Sbjct: 1795 PQYSPSAGYSPSAPGYSPSSTSQYTPQTSTKGDRDKKDSKS 1835