BLASTX nr result
ID: Cinnamomum23_contig00017074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00017074
(1347 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 608 e-171
ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chl... 602 e-169
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun... 595 e-167
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl... 592 e-166
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 590 e-166
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr... 590 e-166
ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chl... 589 e-165
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 586 e-164
ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chl... 585 e-164
gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium r... 585 e-164
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 585 e-164
ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chl... 585 e-164
gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum] 583 e-164
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob... 583 e-164
ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chl... 582 e-163
emb|CDP04372.1| unnamed protein product [Coffea canephora] 582 e-163
ref|XP_010538768.1| PREDICTED: RNA pseudouridine synthase 6, chl... 580 e-162
ref|XP_010538760.1| PREDICTED: RNA pseudouridine synthase 6, chl... 580 e-162
ref|XP_010538752.1| PREDICTED: RNA pseudouridine synthase 6, chl... 580 e-162
gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum] 577 e-162
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 608 bits (1567), Expect = e-171
Identities = 282/353 (79%), Positives = 313/353 (88%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCPEPPP A PEQIRVYKEVTAPSVL+ R SIKGKT+REAQKTFR
Sbjct: 132 FVADLIHFGAVYYALVCPEPPPNAMPEQIRVYKEVTAPSVLKNRLSIKGKTIREAQKTFR 191
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITH+NEFVEAGTYLRVHVHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGT+DNI
Sbjct: 192 ITHINEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTSDNI 251
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESC TFA++ALGL+ PLKTTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 252 EESCVTFATRALGLTIPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLAL 311
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VG ITH+MRP+NIAPR++S DFI WHLC+L+VLECKEVPWP++ K YC++D
Sbjct: 312 AAAPVPVGTITHHMRPINIAPRLISKDFIKGWHLCKLEVLECKEVPWPNSNIEKEYCIDD 371
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW K VAYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE P +NPFG +
Sbjct: 372 CGWPQKDVAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAALAEMTNPGLNPFGEY 431
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
+Y +DD+R++AIEEWI HGKEP IAIGLQACQISWD+GE FYEAG+PWWR
Sbjct: 432 GMKYTNDDNRTKAIEEWIVHHGKEPRIAIGLQACQISWDEGEHFYEAGSPWWR 484
>ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 602 bits (1551), Expect = e-169
Identities = 278/352 (78%), Positives = 314/352 (89%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCPEPPP ATPEQ+R++KEVTAPSVL+KR SIKGKT+REAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFR 179
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
IT VNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI
Sbjct: 180 ITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 239
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL+TPL+TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 240 EESCATFATRALGLTTPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRAL 299
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+GI+THYMRPVNIAPR++S DFI W+LCQL+VLECKEVPWPS + YC+ED
Sbjct: 300 AAAPMPIGIVTHYMRPVNIAPRLISEDFIKGWYLCQLEVLECKEVPWPSTLIEEKYCIED 359
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
GW K+ A++CKINLLTGRTHQ+RAQLAACGAP+VGDSMYMPA IAE P +NPFG++
Sbjct: 360 RGWPLKNSAFKCKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAIAEITSPGLNPFGKY 419
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWW 291
K +Y +++DR A+ EWIA HGKEP +AIGLQACQISWDDGE FY+AG+PWW
Sbjct: 420 KKKYTTENDRETAVAEWIAQHGKEPGVAIGLQACQISWDDGEHFYKAGSPWW 471
>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
gi|462409392|gb|EMJ14726.1| hypothetical protein
PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 595 bits (1535), Expect = e-167
Identities = 272/353 (77%), Positives = 311/353 (88%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQ+RV+KEVTAPSVL+ RASIKGKTVREAQKTFR
Sbjct: 123 FVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFR 182
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITH +EFVEAGTYLRVHVHPKRFPRCY+IDWKSRIIAV+E +VVLDKPAGT+VGGTTDNI
Sbjct: 183 ITHADEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNI 242
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL+TPL TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 243 EESCATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLAL 302
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
GIITHYMRP+N+APR++S DFI +W LCQL+V+ECKE+PWP+ + YC+ED
Sbjct: 303 AAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEIPWPNAVVEEKYCVED 362
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE P +NPFG++
Sbjct: 363 CGWPSKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQY 422
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K Y +++D+ A+ EWIA HGKEPN+AIGLQACQISWDDG+ +EA APWWR
Sbjct: 423 KKHYTTENDKETAVAEWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 475
>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus mume]
Length = 469
Score = 592 bits (1527), Expect = e-166
Identities = 272/353 (77%), Positives = 310/353 (87%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQ+RV+KEVT PSVL+KRASIKGKTVREAQKTFR
Sbjct: 115 FVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTEPSVLKKRASIKGKTVREAQKTFR 174
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
IT +EFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAV+E +VVLDKPAGT+VGGTTDNI
Sbjct: 175 ITQADEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNI 234
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL+TPL TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 235 EESCATFATRALGLTTPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLAL 294
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
GIITHYMRP+N+APR++S DFI +W LCQL+V+ECKEVPWP+ + YC+ED
Sbjct: 295 AAAPVPTGIITHYMRPINVAPRLISEDFIERWSLCQLEVMECKEVPWPNAVVEEKYCVED 354
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA +AE P +NPFG++
Sbjct: 355 CGWPSKDYAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAVAEMESPGLNPFGQY 414
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K Y +++D+ A+ +WIA HGKEPN+AIGLQACQISWDDG+ +EA APWWR
Sbjct: 415 KKHYTTENDKETAVAKWIARHGKEPNVAIGLQACQISWDDGKHTFEARAPWWR 467
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 590 bits (1521), Expect = e-166
Identities = 274/353 (77%), Positives = 311/353 (88%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PP ATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 126 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++ VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 186 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALGL+TPL+TTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 246 EESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLAL 305
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VGI+THYMRP+NIAPR++S DFI W+LCQL+V+ECK+VPWP K+Y +ED
Sbjct: 306 TAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIED 365
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ P +NPFG+
Sbjct: 366 CGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKC 425
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
+ +Y SDDD+ A+ EWI+ HGKEP++AIGLQAC ISWDDGEC YEA +PWWR
Sbjct: 426 QKEYASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 478
>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551674|gb|ESR62303.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 392
Score = 590 bits (1521), Expect = e-166
Identities = 274/353 (77%), Positives = 311/353 (88%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PP ATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 31 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 90
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++ VEAGTYLRVHVHPKRFPRCY+IDWKSRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 91 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNI 150
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALGL+TPL+TTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 151 EESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLAL 210
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VGI+THYMRP+NIAPR++S DFI W+LCQL+V+ECK+VPWP K+Y +ED
Sbjct: 211 TAAPLPVGIMTHYMRPINIAPRLISEDFIKGWYLCQLEVMECKKVPWPDATVGKAYSIED 270
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ P +NPFG+
Sbjct: 271 CGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKC 330
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
+ +Y SDDD+ A+ EWI+ HGKEP++AIGLQAC ISWDDGEC YEA +PWWR
Sbjct: 331 QKEYASDDDKEMAVIEWISQHGKEPSVAIGLQACHISWDDGECCYEARSPWWR 383
>ref|XP_011037691.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Populus
euphratica]
Length = 467
Score = 589 bits (1518), Expect = e-165
Identities = 268/353 (75%), Positives = 310/353 (87%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAV+YALVCP+PPP ATPEQIRV++EVTAPSVL+KRASIKGKTVREAQKTFR
Sbjct: 114 FVADLIHFGAVHYALVCPQPPPTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFR 173
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++F+EAG YLRVHVHPKRFPRCY+IDWKSRII VTES+VVLDKPAGTSVGGTTDNI
Sbjct: 174 ITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNI 233
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL+ PL+TTHQIDNCTEGCVVLAR+K+ CS+FH KIREK VKKLY
Sbjct: 234 EESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARSKEDCSVFHGKIREKTVKKLYIAL 293
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+G++ HYMRP+N+APR+VS +FI WHLCQL+V+ECK VPWP + YC++D
Sbjct: 294 AASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVVEEKYCVQD 353
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTGRTHQ+RAQLAA GAP+VGDSMYMPA +AE V P NPFG++
Sbjct: 354 CGWPSKDHAYECKINLLTGRTHQIRAQLAAVGAPLVGDSMYMPAAVAEMVSPGCNPFGKY 413
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K QY S+DD++ A+EEW+ CHGKEPN+AIGLQACQISWDDG+ Y AG+PWWR
Sbjct: 414 KKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 586 bits (1511), Expect = e-164
Identities = 273/353 (77%), Positives = 309/353 (87%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PP ATPEQ+RV+KEVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 126 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++ VEAGTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 186 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALGL+TPL+TTHQIDNCTEGCVVLART++YCSIFHRKIREK+VKKLY
Sbjct: 246 EESCATFASRALGLTTPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLAL 305
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VGI+THYMRP+NIAPR+VS DFI W+LCQL+V+ECK+VPWP K+Y +ED
Sbjct: 306 TTAPLPVGIMTHYMRPINIAPRLVSEDFITGWYLCQLEVMECKKVPWPDATVGKAYSIED 365
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW S+ AYECKI LLTGRTHQVRAQLAACGAP+VGDSMYMPA IA+ P +NPFG+
Sbjct: 366 CGWPSRDYAYECKIKLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAQLSSPGLNPFGKC 425
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
+ +Y SDDD+ A+ EWI+ HG EP++AIGLQAC ISWDDGEC YEA +PWWR
Sbjct: 426 QKEYASDDDKEMAVIEWISQHGMEPSVAIGLQACHISWDDGECCYEARSPWWR 478
>ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Gossypium raimondii]
Length = 477
Score = 585 bits (1509), Expect = e-164
Identities = 274/353 (77%), Positives = 306/353 (86%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFR
Sbjct: 122 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFR 181
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV +FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGT+DNI
Sbjct: 182 ITHVEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNI 241
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALG STPLKTTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 242 EESCATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLAL 301
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+GIITHYMRP+N+APR+VS DFI W+LC+L+V+ECKEVPWP + YC+ED
Sbjct: 302 TAAPVPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIED 361
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
W SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE P +NPFG++
Sbjct: 362 SEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKY 421
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K +Y ++ D+ + +W A GKEP +AIGLQAC+ISWDDGE FYEA +PWWR
Sbjct: 422 K-KYTTESDKEMTVTKWFARFGKEPKVAIGLQACEISWDDGEHFYEARSPWWR 473
>gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium raimondii]
gi|763790717|gb|KJB57713.1| hypothetical protein
B456_009G176900 [Gossypium raimondii]
Length = 475
Score = 585 bits (1509), Expect = e-164
Identities = 274/353 (77%), Positives = 306/353 (86%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFR 179
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV +FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGT+DNI
Sbjct: 180 ITHVEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNI 239
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALG STPLKTTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 240 EESCATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLAL 299
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+GIITHYMRP+N+APR+VS DFI W+LC+L+V+ECKEVPWP + YC+ED
Sbjct: 300 TAAPVPIGIITHYMRPINVAPRLVSEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIED 359
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
W SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE P +NPFG++
Sbjct: 360 SEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKY 419
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K +Y ++ D+ + +W A GKEP +AIGLQAC+ISWDDGE FYEA +PWWR
Sbjct: 420 K-KYTTESDKEMTVTKWFARFGKEPKVAIGLQACEISWDDGEHFYEARSPWWR 471
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
gi|550340110|gb|EEE85437.2| pseudouridine synthase family
protein [Populus trichocarpa]
Length = 470
Score = 585 bits (1509), Expect = e-164
Identities = 267/353 (75%), Positives = 309/353 (87%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAV+YALVCP+PP ATPEQIRV++EVTAPSVL+KRASIKGKTVREAQKTFR
Sbjct: 114 FVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFR 173
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++F+EAG YLRVHVHPKRFPRCY+IDWKSRII VTES+VVLDKPAGTSVGGTTDNI
Sbjct: 174 ITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNI 233
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL+ PL+TTHQIDNCTEGCVVLART++ CS+FH KIREK VKKLY
Sbjct: 234 EESCATFATRALGLTAPLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIAL 293
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+G++ HYMRP+N+APR+VS +FI WHLCQL+V+ECK VPWP + YC++D
Sbjct: 294 AASPVPIGVVNHYMRPINMAPRLVSEEFIKGWHLCQLEVMECKRVPWPDAVMEEKYCVQD 353
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTGRTHQ+RAQLAA GAP+VGDSMYMPA +AE V P NPFG++
Sbjct: 354 CGWPSKDHAYECKINLLTGRTHQIRAQLAALGAPLVGDSMYMPAAVAEMVSPGCNPFGKY 413
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K QY S+DD++ A+EEW+ CHGKEPN+AIGLQACQISWDDG+ Y AG+PWWR
Sbjct: 414 KKQYTSEDDKAIAVEEWVLCHGKEPNVAIGLQACQISWDDGKHIYNAGSPWWR 466
>ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Sesamum
indicum]
Length = 484
Score = 585 bits (1507), Expect = e-164
Identities = 269/353 (76%), Positives = 307/353 (86%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAV+YALVCP+PPP ATPEQI+ +KE T PSVL+KRASIKGKTVREAQKTFR
Sbjct: 132 FVADLIHFGAVFYALVCPDPPPSATPEQIKTFKEFTDPSVLRKRASIKGKTVREAQKTFR 191
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
IT +EFVEAGTYLRVHVHPKRFPRCYEIDW+SRI+AVT+ YV+LDKPAGTSVGGTTDNI
Sbjct: 192 ITRPDEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAVTDDYVILDKPAGTSVGGTTDNI 251
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL PL+TTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 252 EESCATFATRALGLDAPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLAL 311
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+G+ITHYMRPVNIAPR++SG+FI WHLCQL+VLEC++VPWP+ + +ED
Sbjct: 312 AAAPVSLGVITHYMRPVNIAPRLISGEFINGWHLCQLEVLECRKVPWPNRIIEEKNSIED 371
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYEC+INLLTGRTHQ+RAQLAACGAP+VGDSMYMPA +AE P +NPFG+
Sbjct: 372 CGWPSKDFAYECEINLLTGRTHQIRAQLAACGAPLVGDSMYMPAAVAEANSPGLNPFGKN 431
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K +Y SDD + A+EEWIA HGKEP++AIGLQACQISWDDGE YEAG PWWR
Sbjct: 432 KKEYSSDDVKVLAVEEWIAHHGKEPSVAIGLQACQISWDDGEHTYEAGCPWWR 484
>gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum]
Length = 475
Score = 583 bits (1504), Expect = e-164
Identities = 273/353 (77%), Positives = 305/353 (86%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFR 179
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITH +FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGT+DNI
Sbjct: 180 ITHFEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTSDNI 239
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALG STPLKTTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 240 EESCATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLAL 299
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+GIITHYMRP+N+APR++S DFI W+LC+L+V+ECKEVPWP + YC+ED
Sbjct: 300 TAAPVPIGIITHYMRPINVAPRLISEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIED 359
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
W SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE P +NPFG++
Sbjct: 360 FEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKY 419
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K +Y ++ D+ A+ +W A GKEP +AIGLQACQISWDDGE FYEA +PWWR
Sbjct: 420 K-KYTTESDKEMAVTKWFARFGKEPKVAIGLQACQISWDDGEHFYEARSPWWR 471
>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508781387|gb|EOY28643.1| Pseudouridine synthase family
protein [Theobroma cacao]
Length = 491
Score = 583 bits (1504), Expect = e-164
Identities = 272/353 (77%), Positives = 311/353 (88%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQIR++KEVTAPSVL KR SI+GKTVREAQKTFR
Sbjct: 136 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFR 195
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITHV++FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVT+SYVVLDKPAGTSVGGTTDNI
Sbjct: 196 ITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNI 255
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALG STPLKTTHQIDNCTEGCVVLARTK+YCS+FH KIREK+VKKLY
Sbjct: 256 EESCATFANRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLAL 315
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+G+ITHYMRP+N+APR+VS DFI W+LCQL+V+ECK+VPWP ++YC+ED
Sbjct: 316 TAAPLPIGVITHYMRPINMAPRLVSEDFIKGWYLCQLEVMECKKVPWPDYVIQENYCIED 375
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
GW K AYECKINLLTGRTHQVRAQLAACGAP++GDSMYMP IAE P +NPFG++
Sbjct: 376 SGWPLKDHAYECKINLLTGRTHQVRAQLAACGAPILGDSMYMPPTIAEIANPGLNPFGKY 435
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
K ++ S++D+ AI EWI+ GKEP++AIGLQACQISWDDGE FY+A +PWWR
Sbjct: 436 K-KHTSENDKEIAITEWISQFGKEPSVAIGLQACQISWDDGEHFYKARSPWWR 487
>ref|XP_008800212.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Phoenix
dactylifera]
Length = 483
Score = 582 bits (1501), Expect = e-163
Identities = 278/357 (77%), Positives = 305/357 (85%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAV+YALVCP+PPP ATP+Q+RV+KEVT PSVLQKR+SIKGKTVREAQKTFR
Sbjct: 127 FVADLIHFGAVHYALVCPKPPPSATPDQVRVFKEVTEPSVLQKRSSIKGKTVREAQKTFR 186
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
+T VN+ VEAGTYLRVHVHPKRFPRCYEIDWKSRII VT+SYVVLDKPA TSVGGTTDN
Sbjct: 187 VTDVNQIVEAGTYLRVHVHPKRFPRCYEIDWKSRIITVTDSYVVLDKPAATSVGGTTDNT 246
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EE CATFAS+ALGL TPLKTTHQIDNCTEGCVVLARTKD+CSIFH IREKQVKK Y
Sbjct: 247 EECCATFASRALGLETPLKTTHQIDNCTEGCVVLARTKDFCSIFHGMIREKQVKKFYLAL 306
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VGII+HYMRPVN+APR+VS + IG WHLCQL+VLECKEVPWP+ KSY +ED
Sbjct: 307 AAAPVPVGIISHYMRPVNVAPRLVSEESIGGWHLCQLEVLECKEVPWPNVDVEKSYGIED 366
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK +AYECKINLLTG+THQVRAQLAA GAP+VGDSMYMPA AE INPFGR
Sbjct: 367 CGWPSKDIAYECKINLLTGKTHQVRAQLAAIGAPIVGDSMYMPAAAAEMCNTQINPFGRN 426
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR*DTA 276
+ Q+ S+DDR AIEEWIA HGKEP+ AIGLQA ISWD G+C YEAGAPWWR T+
Sbjct: 427 RKQFTSEDDRILAIEEWIAQHGKEPSAAIGLQASHISWDGGKCSYEAGAPWWRCTTS 483
>emb|CDP04372.1| unnamed protein product [Coffea canephora]
Length = 486
Score = 582 bits (1500), Expect = e-163
Identities = 267/353 (75%), Positives = 309/353 (87%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQI+ YKEVTAPSVL+ RASIKGKTVREAQKT+R
Sbjct: 134 FVADLIHFGAVYYALVCPKPPPSATPEQIKTYKEVTAPSVLKNRASIKGKTVREAQKTYR 193
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
IT +EFVEAGTYLRVHVHPKRFPRCYEIDW+SRI+A+TESYV+LDKPAGTSVGGTTDNI
Sbjct: 194 ITRADEFVEAGTYLRVHVHPKRFPRCYEIDWRSRIVAITESYVILDKPAGTSVGGTTDNI 253
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFA++ALGL++PL TTHQIDNCTEGCVVLARTKDYCS+FH KIREK+VKKLY
Sbjct: 254 EESCATFATRALGLTSPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLAL 313
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
VG+ITHYMRP+NIAPR+VS + + WHLCQL+VLECK+V WP++ T + Y +ED
Sbjct: 314 AAAPVPVGVITHYMRPINIAPRLVSEESVDGWHLCQLEVLECKKVAWPTSMTERRYSIED 373
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW + AYECK+NLLTGRTHQ+RAQLAACGAP+VGDSMY+PA +AE V P +NPF +
Sbjct: 374 CGWPPQDFAYECKVNLLTGRTHQIRAQLAACGAPIVGDSMYLPAAVAEIVNPRLNPFRKN 433
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPWWR 288
+Y ++ D+++AIEEWIA HGKEP +AIGLQACQI WD+GE FYEAG PWWR
Sbjct: 434 SKKYANETDKAQAIEEWIAQHGKEPAVAIGLQACQILWDNGEHFYEAGTPWWR 486
>ref|XP_010538768.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X3
[Tarenaya hassleriana]
Length = 386
Score = 580 bits (1494), Expect = e-162
Identities = 266/354 (75%), Positives = 304/354 (85%), Gaps = 1/354 (0%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
+VADLIHFGAVYYALVCP+PPP ATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR
Sbjct: 30 YVADLIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFR 89
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
+TH +++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNI
Sbjct: 90 VTHTDQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNI 149
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATF ++ALGL PLKTTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 150 EESCATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLAL 209
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+ED
Sbjct: 210 AAEPIPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIED 269
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE V P INPFG+
Sbjct: 270 CGWRSKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKM 329
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISW-DDGECFYEAGAPWWR 288
K MS+ D A+ EWI+ HGKEP++ IGLQACQI+W DD E YEAG PWWR
Sbjct: 330 KKTCMSEHDSEIAVSEWISQHGKEPSVGIGLQACQIAWNDDTEHLYEAGTPWWR 383
>ref|XP_010538760.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Tarenaya hassleriana]
Length = 393
Score = 580 bits (1494), Expect = e-162
Identities = 266/354 (75%), Positives = 304/354 (85%), Gaps = 1/354 (0%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
+VADLIHFGAVYYALVCP+PPP ATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR
Sbjct: 37 YVADLIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFR 96
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
+TH +++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNI
Sbjct: 97 VTHTDQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNI 156
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATF ++ALGL PLKTTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 157 EESCATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLAL 216
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+ED
Sbjct: 217 AAEPIPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIED 276
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE V P INPFG+
Sbjct: 277 CGWRSKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKM 336
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISW-DDGECFYEAGAPWWR 288
K MS+ D A+ EWI+ HGKEP++ IGLQACQI+W DD E YEAG PWWR
Sbjct: 337 KKTCMSEHDSEIAVSEWISQHGKEPSVGIGLQACQIAWNDDTEHLYEAGTPWWR 390
>ref|XP_010538752.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Tarenaya hassleriana]
Length = 475
Score = 580 bits (1494), Expect = e-162
Identities = 266/354 (75%), Positives = 304/354 (85%), Gaps = 1/354 (0%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
+VADLIHFGAVYYALVCP+PPP ATPEQ+R+++EVT+PSVL R SIKGKTVREAQKTFR
Sbjct: 119 YVADLIHFGAVYYALVCPKPPPTATPEQVRLFEEVTSPSVLSNRTSIKGKTVREAQKTFR 178
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
+TH +++VEAGTYLRVHVHPKRFPRCYEIDWKSR+IAVT+SYV+LDKPAGTSVGGTTDNI
Sbjct: 179 VTHTDQYVEAGTYLRVHVHPKRFPRCYEIDWKSRVIAVTDSYVILDKPAGTSVGGTTDNI 238
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATF ++ALGL PLKTTHQIDNCTEGCVV ARTK+YCS+FH+KIR+K+VKKLY
Sbjct: 239 EESCATFTTRALGLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHKKIRDKEVKKLYLAL 298
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
GIITHYMRP+N+APR+VS D I WHLCQL+VLECK++PWP AT K YC+ED
Sbjct: 299 AAEPIPTGIITHYMRPINMAPRLVSEDPIKGWHLCQLEVLECKKLPWPDAATEKKYCIED 358
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
CGW SK AYECKINLLTG+THQ+RAQLAACGAP+VGDSMYMPA IAE V P INPFG+
Sbjct: 359 CGWRSKEYAYECKINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMVNPGINPFGKM 418
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISW-DDGECFYEAGAPWWR 288
K MS+ D A+ EWI+ HGKEP++ IGLQACQI+W DD E YEAG PWWR
Sbjct: 419 KKTCMSEHDSEIAVSEWISQHGKEPSVGIGLQACQIAWNDDTEHLYEAGTPWWR 472
>gb|KHG01919.1| hypothetical protein F383_22898 [Gossypium arboreum]
Length = 520
Score = 577 bits (1488), Expect = e-162
Identities = 271/351 (77%), Positives = 303/351 (86%)
Frame = -2
Query: 1346 FVADLIHFGAVYYALVCPEPPPRATPEQIRVYKEVTAPSVLQKRASIKGKTVREAQKTFR 1167
FVADLIHFGAVYYALVCP+PPP ATPEQIR++KEVTAPSVL KR SIKGKTVREAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFR 179
Query: 1166 ITHVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 987
ITH +FVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAV +SYVVLDKPAGTSVGGT+DNI
Sbjct: 180 ITHFEQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTSDNI 239
Query: 986 EESCATFASQALGLSTPLKTTHQIDNCTEGCVVLARTKDYCSIFHRKIREKQVKKLYXXX 807
EESCATFAS+ALG STPLKTTHQIDNCTEGCVVLARTK+YCSIFH KIREK+VKKLY
Sbjct: 240 EESCATFASRALGFSTPLKTTHQIDNCTEGCVVLARTKEYCSIFHGKIREKKVKKLYLAL 299
Query: 806 XXXXXXVGIITHYMRPVNIAPRIVSGDFIGQWHLCQLKVLECKEVPWPSNATAKSYCLED 627
+GIITHYMRP+N+APR++S DFI W+LC+L+V+ECKEVPWP + YC+ED
Sbjct: 300 TAAPVPIGIITHYMRPINVAPRLISEDFIKGWYLCKLEVMECKEVPWPDPVIQQKYCIED 359
Query: 626 CGWSSKHVAYECKINLLTGRTHQVRAQLAACGAPVVGDSMYMPAVIAEKVKPSINPFGRF 447
W SK AYECKINLLTGRTHQVRAQLAACGAP+VGDSMYMPA IAE P +NPFG++
Sbjct: 360 FEWPSKDRAYECKINLLTGRTHQVRAQLAACGAPIVGDSMYMPAAIAEMANPGLNPFGKY 419
Query: 446 KNQYMSDDDRSRAIEEWIACHGKEPNIAIGLQACQISWDDGECFYEAGAPW 294
K +Y ++ D+ A+ +W A GKEP +AIGLQACQISWDDGE FYEA +PW
Sbjct: 420 K-KYTTESDKEMAVTKWFARFGKEPKVAIGLQACQISWDDGEHFYEARSPW 469