BLASTX nr result

ID: Cinnamomum23_contig00016886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00016886
         (620 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010267122.1| PREDICTED: poly(A) polymerase PAPalpha-like ...    50   6e-08
ref|XP_010267125.1| PREDICTED: poly(A) polymerase beta-like isof...    50   6e-08

>ref|XP_010267122.1| PREDICTED: poly(A) polymerase PAPalpha-like isoform X1 [Nelumbo
           nucifera]
          Length = 781

 Score = 50.4 bits (119), Expect(2) = 6e-08
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +2

Query: 53  VKPNAALGMVMKVRGEVNSESAQRPVIRLSLTSTA 157
           V PN ALGMV+K R   NSES  +PVIRLSLTSTA
Sbjct: 747 VLPNVALGMVLKARSGANSESVSKPVIRLSLTSTA 781



 Score = 33.5 bits (75), Expect(2) = 6e-08
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 3   NGCINGSGEFQN*LTEEL 56
           NGC+NG+G FQN LTEEL
Sbjct: 728 NGCLNGNGIFQNDLTEEL 745


>ref|XP_010267125.1| PREDICTED: poly(A) polymerase beta-like isoform X4 [Nelumbo
           nucifera] gi|720035715|ref|XP_010267126.1| PREDICTED:
           poly(A) polymerase beta-like isoform X4 [Nelumbo
           nucifera]
          Length = 694

 Score = 50.4 bits (119), Expect(2) = 6e-08
 Identities = 25/35 (71%), Positives = 27/35 (77%)
 Frame = +2

Query: 53  VKPNAALGMVMKVRGEVNSESAQRPVIRLSLTSTA 157
           V PN ALGMV+K R   NSES  +PVIRLSLTSTA
Sbjct: 660 VLPNVALGMVLKARSGANSESVSKPVIRLSLTSTA 694



 Score = 33.5 bits (75), Expect(2) = 6e-08
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 3   NGCINGSGEFQN*LTEEL 56
           NGC+NG+G FQN LTEEL
Sbjct: 641 NGCLNGNGIFQNDLTEEL 658


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