BLASTX nr result
ID: Cinnamomum23_contig00016433
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum23_contig00016433 (864 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_009780146.1| PREDICTED: uncharacterized protein LOC104229... 49 9e-08 ref|XP_009616949.1| PREDICTED: uncharacterized protein LOC104109... 47 2e-06 gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 40 6e-06 ref|XP_009769881.1| PREDICTED: uncharacterized protein LOC104220... 49 8e-06 >ref|XP_009780146.1| PREDICTED: uncharacterized protein LOC104229240 [Nicotiana sylvestris] Length = 253 Score = 48.5 bits (114), Expect(2) = 9e-08 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 14/168 (8%) Frame = +2 Query: 401 QGSTLSPYLFSTNYEQIN*S----------YSRRVILVCCL*MI*YWWMN*WR*CEI*EM 550 QGS LSP+LF+ + ++ + ++L+ + + + WR Sbjct: 84 QGSALSPFLFALVMDVVSHHIQGEVSWCMLFVNDIVLIDEMRSVVNARLEVWR------- 136 Query: 551 MTALESKG*NKFLFIYFRKHSKISIKKTEYIN*NFSGDVQRNITHVRIEAQVIPQR---- 718 LESKG K+S KTEY+ FS V ++AQVIP+R Sbjct: 137 -QTLESKG------------FKLSRTKTEYLECKFSDGTHYVDIEVTLDAQVIPKRASFK 183 Query: 719 FLPVLCLCN**E*EIEEDDVCRIRVVGLK*RFTSGMLCDRHIPNKIEG 862 +L + N EI+ED RI ++ R SG+LCDR++P +++G Sbjct: 184 YLGSIIQGNE---EIDEDVAHRIGAGWMEWRLASGVLCDRNVPLRLKG 228 Score = 35.8 bits (81), Expect(2) = 9e-08 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Frame = +1 Query: 202 ERRKNLYTVFINLD--YDMLLRYLTRWTLDKRSARRGYIDIIEDVYEGNK 345 ER+K+L+ VFI+L+ Y+ +LR + L+ GYI +I+D+Y+ K Sbjct: 14 ERKKDLHMVFIDLEKAYNKVLREVLWRCLEVSGVSVGYISVIKDMYDDAK 63 >ref|XP_009616949.1| PREDICTED: uncharacterized protein LOC104109376 [Nicotiana tomentosiformis] Length = 348 Score = 47.4 bits (111), Expect(3) = 2e-06 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +2 Query: 605 KHSKISIKKTEYIN*NFSGDVQRNITHVRIEAQVIPQR-FLPVLCLCN**E*EIEEDDVC 781 K K+S KTEY+ FS + VR++++VIP+R L + EI+ D Sbjct: 122 KGFKLSRTKTEYLECKFSDEPGEADMDVRLDSKVIPKRGSFKYLGSIIQGDGEIDGDVTH 181 Query: 782 RIRVVGLK*RFTSGMLCDRHIPNKIEG 862 RIRV +K R G+LCD+ +P K++G Sbjct: 182 RIRVGWMKWRLAPGVLCDKKVPPKLKG 208 Score = 27.7 bits (60), Expect(3) = 2e-06 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +3 Query: 429 FPLIMSKLISHIQEELSWCVV 491 F L+M L HIQ E+ WC++ Sbjct: 73 FALVMDALTHHIQGEVPWCML 93 Score = 23.5 bits (49), Expect(3) = 2e-06 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +1 Query: 484 VLFVDDIVLVDE 519 +LF DDIVL+DE Sbjct: 92 MLFADDIVLIDE 103 >gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu] Length = 882 Score = 40.0 bits (92), Expect(2) = 6e-06 Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 2/50 (4%) Frame = +1 Query: 193 KNIERRKNLYTVFINLD--YDMLLRYLTRWTLDKRSARRGYIDIIEDVYE 336 K++ R K+L+ VFI+L+ YD + R + W L+K YI +I+D+Y+ Sbjct: 158 KDVGRNKDLHMVFIDLEKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYD 207 Score = 38.1 bits (87), Expect(2) = 6e-06 Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 14/168 (8%) Frame = +2 Query: 401 QGSTLSPYLFSTNYEQIN*S----------YSRRVILVCCL*MI*YWWMN*WR*CEI*EM 550 QGS LSPYLF+ +++ ++ V+LV + WR Sbjct: 231 QGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWR------- 283 Query: 551 MTALESKG*NKFLFIYFRKHSKISIKKTEYIN*NFSGDVQRNITHVRIEAQVIPQR---- 718 LESKG ++S KTEY+ FS + V ++ QV+P++ Sbjct: 284 -QTLESKG------------FRLSRTKTEYMMCGFS-TTRCEEEEVSLDGQVVPRKDTFW 329 Query: 719 FLPVLCLCN**E*EIEEDDVCRIRVVGLK*RFTSGMLCDRHIPNKIEG 862 +L L + I+ED RI+ +K R SG+LCD+ +P K++G Sbjct: 330 YLGSLLQE---DGGIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKG 374 >ref|XP_009769881.1| PREDICTED: uncharacterized protein LOC104220677 [Nicotiana sylvestris] Length = 252 Score = 48.9 bits (115), Expect(2) = 8e-06 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +2 Query: 605 KHSKISIKKTEYIN*NFSGDVQRNITHVRIEAQVIPQR-FLPVLCLCN**E*EIEEDDVC 781 K K+S KTEY+ FS + VR+++QVIP R L + EI+ED + Sbjct: 150 KGFKLSRTKTEYLECKFSDVLGETNREVRLDSQVIPNRESFKYLGSIIQGDGEIDEDVMH 209 Query: 782 RIRVVGLK*RFTSGMLCDRHIPNKIEG 862 I V +K R SG+LCD+ +P K++G Sbjct: 210 HIGVGWMKWRLASGVLCDKKVPLKLKG 236 Score = 28.9 bits (63), Expect(2) = 8e-06 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +3 Query: 420 LIFFPLIMSKLISHIQEELSWCVV 491 L F L+M L HIQ E+ WC++ Sbjct: 98 LFLFALVMDALTIHIQGEVPWCML 121