BLASTX nr result
ID: Cinnamomum23_contig00016330
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00016330
(1349 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV su... 369 3e-99
ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV su... 362 3e-97
ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV su... 336 3e-89
ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV su... 336 3e-89
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-... 329 3e-87
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su... 327 2e-86
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su... 327 2e-86
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su... 327 2e-86
ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase IV su... 318 8e-84
ref|XP_012701776.1| PREDICTED: DNA-directed RNA polymerase IV su... 318 8e-84
ref|XP_012701775.1| PREDICTED: DNA-directed RNA polymerase IV su... 318 8e-84
ref|XP_004970757.1| PREDICTED: DNA-directed RNA polymerase IV su... 318 8e-84
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 317 1e-83
ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV su... 317 2e-83
ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV su... 316 3e-83
ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV su... 316 3e-83
ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV su... 316 3e-83
ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV su... 316 3e-83
ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV su... 313 1e-82
gb|KDP25521.1| hypothetical protein JCGZ_20677 [Jatropha curcas] 313 1e-82
>ref|XP_010278507.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nelumbo nucifera]
Length = 1489
Score = 369 bits (947), Expect = 3e-99
Identities = 183/358 (51%), Positives = 250/358 (69%), Gaps = 4/358 (1%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW D P++ K H S +L+LKVFMSE+C+R KFWS++Q+AC+ ++DLIDWE S P+
Sbjct: 1128 VDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPD 1187
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+Y++ A+GIDA WK+FL LK A SD+G+T+ EHLL++A+ LS TGEF GL+AKG+K
Sbjct: 1188 NIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIK 1247
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
Q DQ S+S+PF QACFSNPG CFIKAAKE DDL G LD+V+WGK+ P+GTGG FDIL
Sbjct: 1248 RQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDIL 1307
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDT----K 641
YSGKG IY L + S +++E + ++ W ++ D
Sbjct: 1308 YSGKGFTPAKPTNIYSALCHESKSHGENVETGLTDACRKVCCKWEKQSFYASKDPLPKGD 1367
Query: 640 SGHVNARCELKSAPRRLDSWLVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSN 461
S L+S R D ++ + SL+ ILHKYP+N+YL+E DKS+L++AL FHP+ N
Sbjct: 1368 SSENLPSSVLRSIYSRED--VLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRN 1425
Query: 460 AKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFK 287
K+G+GP++IK+GY H +SRCFMLVR DGT+ DFSYRKC++GA+E+ P++ F+
Sbjct: 1426 QKMGTGPKDIKVGYHSEHQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQIASRFQ 1483
>ref|XP_010278508.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nelumbo nucifera]
Length = 1373
Score = 362 bits (930), Expect = 3e-97
Identities = 183/364 (50%), Positives = 250/364 (68%), Gaps = 10/364 (2%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW D P++ K H S +L+LKVFMSE+C+R KFWS++Q+AC+ ++DLIDWE S P+
Sbjct: 1006 VDILWNDLPQSSKSHMFSSGELYLKVFMSEDCERTKFWSSLQNACLPVMDLIDWERSYPD 1065
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+Y++ A+GIDA WK+FL LK A SD+G+T+ EHLL++A+ LS TGEF GL+AKG+K
Sbjct: 1066 NIYNIVCAYGIDAGWKYFLRSLKFALSDIGKTVLLEHLLLVANSLSFTGEFLGLSAKGIK 1125
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
Q DQ S+S+PF QACFSNPG CFIKAAKE DDL G LD+V+WGK+ P+GTGG FDIL
Sbjct: 1126 RQMDQASVSSPFMQACFSNPGACFIKAAKEGAVDDLQGILDSVSWGKKVPIGTGGHFDIL 1185
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDT----K 641
YSGKG IY L + S +++E + ++ W ++ D
Sbjct: 1186 YSGKGFTPAKPTNIYSALCHESKSHGENVETGLTDACRKVCCKWEKQSFYASKDPLPKGD 1245
Query: 640 SGHVNARCELKSAPRRLDSWLVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSN 461
S L+S R D ++ + SL+ ILHKYP+N+YL+E DKS+L++AL FHP+ N
Sbjct: 1246 SSENLPSSVLRSIYSRED--VLKLNSSLKHILHKYPINDYLSEVDKSILLRALYFHPKRN 1303
Query: 460 AKIGSGPQEIK------IGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLV 299
K+G+GP++IK +GY H +SRCFMLVR DGT+ DFSYRKC++GA+E+ P++
Sbjct: 1304 QKMGTGPKDIKVLPRIRVGYHSEHQQSRCFMLVRTDGTIEDFSYRKCILGALEKICPQIA 1363
Query: 298 PIFK 287
F+
Sbjct: 1364 SRFQ 1367
>ref|XP_009411452.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Musa
acuminata subsp. malaccensis]
Length = 1562
Score = 336 bits (861), Expect = 3e-89
Identities = 185/403 (45%), Positives = 248/403 (61%), Gaps = 45/403 (11%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
V+IL E P + +LFL+V MS+ C G FWS +QDACI I+DLIDW+ S P+
Sbjct: 1164 VEILCESLPGS-------GSELFLRVTMSKKCLPGSFWSDLQDACIPIMDLIDWQCSHPD 1216
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+Y++ +GIDAAWK+F+ LKS T+D+GR +H+ HL + ADCLSVTGEFHGL+ KGL+
Sbjct: 1217 NVYNISGTYGIDAAWKYFVKSLKSVTADIGRDIHKRHLFMAADCLSVTGEFHGLSTKGLR 1276
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR+ SIS+PF+QAC SNP NCF+ AAK+ D L GTLDAVAWGKEAP GTGG F+I+
Sbjct: 1277 QQRNDMSISSPFAQACLSNPVNCFVNAAKQGSMDHLSGTLDAVAWGKEAPSGTGGPFEIV 1336
Query: 808 YSGKGQKLGGLVGIYETLQSHTIS-QEDDLE-------------RKQP------------ 707
YSGK L GIY+ L S Q+ D E ++QP
Sbjct: 1337 YSGKVHNLTRGEGIYKNLHSIKAELQQGDGEVCMAANQTVPAKWKQQPKYSTNFDGAKET 1396
Query: 706 ---------HSHDELSKNWRA--------RAVCECDDTKSGHVNARCELKSAPRRLDSW- 581
H + + +R + + D H+ K + + SW
Sbjct: 1397 IDPQTSDEDHLKERIVSKFRTNCKGYNKQQQISANDFLAKSHLTFGLRSKFSSESVSSWT 1456
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
+VDM SLR IL+KYP++ +L+E+D S L++AL +HP+ AKIGSG Q+IK+G SP HP
Sbjct: 1457 DVVDMCSSLRTILYKYPIDGFLDEKDNSSLIEALNYHPKRAAKIGSGIQKIKVGCSPLHP 1516
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLF 275
SRCF+L+R+DG+L DFSYRKCV+GA + SP+ I K++F
Sbjct: 1517 GSRCFVLLRSDGSLEDFSYRKCVVGAAKLISPEFGSIVHKKIF 1559
>ref|XP_009411449.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Musa
acuminata subsp. malaccensis]
gi|695047161|ref|XP_009411450.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Musa acuminata
subsp. malaccensis] gi|695047163|ref|XP_009411451.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1569
Score = 336 bits (861), Expect = 3e-89
Identities = 185/403 (45%), Positives = 248/403 (61%), Gaps = 45/403 (11%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
V+IL E P + +LFL+V MS+ C G FWS +QDACI I+DLIDW+ S P+
Sbjct: 1171 VEILCESLPGS-------GSELFLRVTMSKKCLPGSFWSDLQDACIPIMDLIDWQCSHPD 1223
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+Y++ +GIDAAWK+F+ LKS T+D+GR +H+ HL + ADCLSVTGEFHGL+ KGL+
Sbjct: 1224 NVYNISGTYGIDAAWKYFVKSLKSVTADIGRDIHKRHLFMAADCLSVTGEFHGLSTKGLR 1283
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR+ SIS+PF+QAC SNP NCF+ AAK+ D L GTLDAVAWGKEAP GTGG F+I+
Sbjct: 1284 QQRNDMSISSPFAQACLSNPVNCFVNAAKQGSMDHLSGTLDAVAWGKEAPSGTGGPFEIV 1343
Query: 808 YSGKGQKLGGLVGIYETLQSHTIS-QEDDLE-------------RKQP------------ 707
YSGK L GIY+ L S Q+ D E ++QP
Sbjct: 1344 YSGKVHNLTRGEGIYKNLHSIKAELQQGDGEVCMAANQTVPAKWKQQPKYSTNFDGAKET 1403
Query: 706 ---------HSHDELSKNWRA--------RAVCECDDTKSGHVNARCELKSAPRRLDSW- 581
H + + +R + + D H+ K + + SW
Sbjct: 1404 IDPQTSDEDHLKERIVSKFRTNCKGYNKQQQISANDFLAKSHLTFGLRSKFSSESVSSWT 1463
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
+VDM SLR IL+KYP++ +L+E+D S L++AL +HP+ AKIGSG Q+IK+G SP HP
Sbjct: 1464 DVVDMCSSLRTILYKYPIDGFLDEKDNSSLIEALNYHPKRAAKIGSGIQKIKVGCSPLHP 1523
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLF 275
SRCF+L+R+DG+L DFSYRKCV+GA + SP+ I K++F
Sbjct: 1524 GSRCFVLLRSDGSLEDFSYRKCVVGAAKLISPEFGSIVHKKIF 1566
>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
polymerase II subunit RPB1-B, putative [Theobroma cacao]
Length = 1484
Score = 329 bits (844), Expect = 3e-87
Identities = 168/364 (46%), Positives = 235/364 (64%), Gaps = 8/364 (2%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW+D K K H +L+L+VF+S + K W + + C+QI+D+IDW S P+
Sbjct: 1119 VDILWKDRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPD 1178
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+ + A+GIDA WK FL +LKSA SD G+T+ EHLL++A+CLS TGEF GLN+KGL+
Sbjct: 1179 NINQLCLAYGIDAGWKFFLNNLKSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLR 1238
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR+ +S+PF QACFSNP F+KAAK +DDL GT+DA+AWG+ +GTGG FDI+
Sbjct: 1239 QQREHAYVSSPFMQACFSNPSASFVKAAKTGASDDLQGTIDALAWGRIPHIGTGGQFDII 1298
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YS K Q+L V +Y+ L S SQ+ D+E + P + + S+ + + + D+ S +
Sbjct: 1299 YSVKDQRLAEPVDVYKLLGSSISSQKQDVEFEVPKALNFKSEKYGSLLIDALGDSASEEL 1358
Query: 628 NARCELKSAPRRLDSW--------LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFH 473
K +R W + + +LR+ILHKYP+++ L+E D + LM AL FH
Sbjct: 1359 K-----KIETKRRSIWRELLTLDDIQRLSRALRNILHKYPIDHRLSEADWNTLMMALYFH 1413
Query: 472 PQSNAKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPI 293
P+ + KIGSG QEIK+GY P H +RCF LVR DGT+VDFSY KCV+GA+E +P
Sbjct: 1414 PRRDEKIGSGAQEIKVGYHPEHANARCFSLVRTDGTIVDFSYHKCVLGALEIIAPHRAKS 1473
Query: 292 FKKR 281
+K +
Sbjct: 1474 YKSK 1477
>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
vinifera]
Length = 1354
Score = 327 bits (837), Expect = 2e-86
Identities = 171/359 (47%), Positives = 234/359 (65%), Gaps = 3/359 (0%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW D+P + + S +L+L+V++S +C + FW + DAC+QI+D+IDWE S P+
Sbjct: 990 VDILWNDNPDSDVLKSS-SGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPD 1048
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+F +GIDA WK+FL LKSA SD+G+T+ EHLL++A CLS TGEF GLNAKG+
Sbjct: 1049 NIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMA 1108
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
Q++ TSIS+PF Q CFS+PG+CFIKA K VAD+L G+LDA+AWGK VG+GG FDIL
Sbjct: 1109 RQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDIL 1168
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YS KG +L IY+ L S T E +L+ K P + + + A+ V D+ S
Sbjct: 1169 YSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGC 1228
Query: 628 NARCELKSAPRRLDSWLVD---MFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNA 458
+ ++ + R L D + L+ IL KYP+N+ L+E DK+ LM AL FHP+ +
Sbjct: 1229 KSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDE 1288
Query: 457 KIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
KIG G Q IK+ Y + +RCF LVR DGT DFSY KCV GA+E P+ ++ R
Sbjct: 1289 KIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1347
>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
vinifera]
Length = 1458
Score = 327 bits (837), Expect = 2e-86
Identities = 171/359 (47%), Positives = 234/359 (65%), Gaps = 3/359 (0%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW D+P + + S +L+L+V++S +C + FW + DAC+QI+D+IDWE S P+
Sbjct: 1094 VDILWNDNPDSDVLKSS-SGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPD 1152
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+F +GIDA WK+FL LKSA SD+G+T+ EHLL++A CLS TGEF GLNAKG+
Sbjct: 1153 NIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMA 1212
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
Q++ TSIS+PF Q CFS+PG+CFIKA K VAD+L G+LDA+AWGK VG+GG FDIL
Sbjct: 1213 RQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDIL 1272
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YS KG +L IY+ L S T E +L+ K P + + + A+ V D+ S
Sbjct: 1273 YSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGC 1332
Query: 628 NARCELKSAPRRLDSWLVD---MFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNA 458
+ ++ + R L D + L+ IL KYP+N+ L+E DK+ LM AL FHP+ +
Sbjct: 1333 KSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDE 1392
Query: 457 KIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
KIG G Q IK+ Y + +RCF LVR DGT DFSY KCV GA+E P+ ++ R
Sbjct: 1393 KIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1451
>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
vinifera]
Length = 1460
Score = 327 bits (837), Expect = 2e-86
Identities = 171/359 (47%), Positives = 234/359 (65%), Gaps = 3/359 (0%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW D+P + + S +L+L+V++S +C + FW + DAC+QI+D+IDWE S P+
Sbjct: 1096 VDILWNDNPDSDVLKSS-SGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPD 1154
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+F +GIDA WK+FL LKSA SD+G+T+ EHLL++A CLS TGEF GLNAKG+
Sbjct: 1155 NIHDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMA 1214
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
Q++ TSIS+PF Q CFS+PG+CFIKA K VAD+L G+LDA+AWGK VG+GG FDIL
Sbjct: 1215 RQKELTSISSPFMQGCFSSPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDIL 1274
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YS KG +L IY+ L S T E +L+ K P + + + A+ V D+ S
Sbjct: 1275 YSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGC 1334
Query: 628 NARCELKSAPRRLDSWLVD---MFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNA 458
+ ++ + R L D + L+ IL KYP+N+ L+E DK+ LM AL FHP+ +
Sbjct: 1335 KSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDE 1394
Query: 457 KIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
KIG G Q IK+ Y + +RCF LVR DGT DFSY KCV GA+E P+ ++ R
Sbjct: 1395 KIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1453
>ref|XP_004970758.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X4
[Setaria italica]
Length = 1181
Score = 318 bits (814), Expect = 8e-84
Identities = 160/346 (46%), Positives = 234/346 (67%), Gaps = 5/346 (1%)
Frame = -2
Query: 1288 KLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHFLG 1109
+L +KV MSE+C+ G+FW+ +Q+ACI +++LIDWE S+P N+YD+F ++GID+AWK F+
Sbjct: 840 ELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQPKNVYDIFCSYGIDSAWKCFVE 899
Query: 1108 HLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFSNP 929
LKS TSD+GR + +EHLLI+AD LSVTG+F L+++GL QR + SIS+PFS+ACFS P
Sbjct: 900 SLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGLNQQRSRLSISSPFSEACFSRP 959
Query: 928 GNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETLQS 749
FI AAK D+LCG+LDA+AWGKE GT G F+I+++GK + IY+ L+S
Sbjct: 960 ARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEIMHAGKPHEPEQNESIYDFLRS 1019
Query: 748 HTIS--QEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHVNA-RCELKSAPRRLDSW- 581
+ ++D ++ + + + L R R C+ D+ + A + ++ W
Sbjct: 1020 PEVRNFEKDHMDTCRQSTENAL----RCRLACKSKDSATVQGGAMTIDQGFLHAKVGIWD 1075
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
++DM SL+++L +YP+N ++ E DKS L++AL FHP KIG G +EIKIG +PSHP
Sbjct: 1076 NIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFHPNGAQKIGVGVREIKIGLNPSHP 1135
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLFKRS 266
+RCF+L+R DGT DFSY KCV GA SP+L F+K+L +R+
Sbjct: 1136 GTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSYFEKKLHRRA 1181
>ref|XP_012701776.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3
[Setaria italica]
Length = 1362
Score = 318 bits (814), Expect = 8e-84
Identities = 160/346 (46%), Positives = 234/346 (67%), Gaps = 5/346 (1%)
Frame = -2
Query: 1288 KLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHFLG 1109
+L +KV MSE+C+ G+FW+ +Q+ACI +++LIDWE S+P N+YD+F ++GID+AWK F+
Sbjct: 1021 ELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQPKNVYDIFCSYGIDSAWKCFVE 1080
Query: 1108 HLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFSNP 929
LKS TSD+GR + +EHLLI+AD LSVTG+F L+++GL QR + SIS+PFS+ACFS P
Sbjct: 1081 SLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGLNQQRSRLSISSPFSEACFSRP 1140
Query: 928 GNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETLQS 749
FI AAK D+LCG+LDA+AWGKE GT G F+I+++GK + IY+ L+S
Sbjct: 1141 ARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEIMHAGKPHEPEQNESIYDFLRS 1200
Query: 748 HTIS--QEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHVNA-RCELKSAPRRLDSW- 581
+ ++D ++ + + + L R R C+ D+ + A + ++ W
Sbjct: 1201 PEVRNFEKDHMDTCRQSTENAL----RCRLACKSKDSATVQGGAMTIDQGFLHAKVGIWD 1256
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
++DM SL+++L +YP+N ++ E DKS L++AL FHP KIG G +EIKIG +PSHP
Sbjct: 1257 NIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFHPNGAQKIGVGVREIKIGLNPSHP 1316
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLFKRS 266
+RCF+L+R DGT DFSY KCV GA SP+L F+K+L +R+
Sbjct: 1317 GTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSYFEKKLHRRA 1362
>ref|XP_012701775.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Setaria italica]
Length = 1450
Score = 318 bits (814), Expect = 8e-84
Identities = 160/346 (46%), Positives = 234/346 (67%), Gaps = 5/346 (1%)
Frame = -2
Query: 1288 KLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHFLG 1109
+L +KV MSE+C+ G+FW+ +Q+ACI +++LIDWE S+P N+YD+F ++GID+AWK F+
Sbjct: 1109 ELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQPKNVYDIFCSYGIDSAWKCFVE 1168
Query: 1108 HLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFSNP 929
LKS TSD+GR + +EHLLI+AD LSVTG+F L+++GL QR + SIS+PFS+ACFS P
Sbjct: 1169 SLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGLNQQRSRLSISSPFSEACFSRP 1228
Query: 928 GNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETLQS 749
FI AAK D+LCG+LDA+AWGKE GT G F+I+++GK + IY+ L+S
Sbjct: 1229 ARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEIMHAGKPHEPEQNESIYDFLRS 1288
Query: 748 HTIS--QEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHVNA-RCELKSAPRRLDSW- 581
+ ++D ++ + + + L R R C+ D+ + A + ++ W
Sbjct: 1289 PEVRNFEKDHMDTCRQSTENAL----RCRLACKSKDSATVQGGAMTIDQGFLHAKVGIWD 1344
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
++DM SL+++L +YP+N ++ E DKS L++AL FHP KIG G +EIKIG +PSHP
Sbjct: 1345 NIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFHPNGAQKIGVGVREIKIGLNPSHP 1404
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLFKRS 266
+RCF+L+R DGT DFSY KCV GA SP+L F+K+L +R+
Sbjct: 1405 GTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSYFEKKLHRRA 1450
>ref|XP_004970757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Setaria italica] gi|835980385|ref|XP_012701774.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Setaria italica]
Length = 1451
Score = 318 bits (814), Expect = 8e-84
Identities = 160/346 (46%), Positives = 234/346 (67%), Gaps = 5/346 (1%)
Frame = -2
Query: 1288 KLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHFLG 1109
+L +KV MSE+C+ G+FW+ +Q+ACI +++LIDWE S+P N+YD+F ++GID+AWK F+
Sbjct: 1110 ELLVKVGMSEHCKAGRFWATLQNACIPVMELIDWEQSQPKNVYDIFCSYGIDSAWKCFVE 1169
Query: 1108 HLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFSNP 929
LKS TSD+GR + +EHLLI+AD LSVTG+F L+++GL QR + SIS+PFS+ACFS P
Sbjct: 1170 SLKSVTSDIGRNVRREHLLIVADSLSVTGQFQALSSQGLNQQRSRLSISSPFSEACFSRP 1229
Query: 928 GNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETLQS 749
FI AAK D+LCG+LDA+AWGKE GT G F+I+++GK + IY+ L+S
Sbjct: 1230 ARSFINAAKHCSVDNLCGSLDAIAWGKEPFNGTSGPFEIMHAGKPHEPEQNESIYDFLRS 1289
Query: 748 HTIS--QEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHVNA-RCELKSAPRRLDSW- 581
+ ++D ++ + + + L R R C+ D+ + A + ++ W
Sbjct: 1290 PEVRNFEKDHMDTCRQSTENAL----RCRLACKSKDSATVQGGAMTIDQGFLHAKVGIWD 1345
Query: 580 -LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
++DM SL+++L +YP+N ++ E DKS L++AL FHP KIG G +EIKIG +PSHP
Sbjct: 1346 NIIDMRTSLQNMLREYPLNGFVKETDKSQLVEALKFHPNGAQKIGVGVREIKIGLNPSHP 1405
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLFKRS 266
+RCF+L+R DGT DFSY KCV GA SP+L F+K+L +R+
Sbjct: 1406 GTRCFILLRKDGTTEDFSYNKCVQGAANSISPQLGSYFEKKLHRRA 1451
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 317 bits (812), Expect = 1e-83
Identities = 164/341 (48%), Positives = 224/341 (65%), Gaps = 3/341 (0%)
Frame = -2
Query: 1294 SKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHF 1115
S +L+L+V++S +C + FW + DAC+QI+D+IDWE S P+N++D+F +GIDA WK+F
Sbjct: 1002 SGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYF 1061
Query: 1114 LGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFS 935
L LKSA SD+G+T+ EHLL++A CLS TGEF GLNAKG+ Q++ TSIS+PF Q CFS
Sbjct: 1062 LNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQKELTSISSPFMQGCFS 1121
Query: 934 NPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETL 755
+PG+CFIKA K VAD+L G+LDA+AWGK VG+GG FDILYS KG +L IY+ L
Sbjct: 1122 SPGSCFIKAGKRAVADNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLL 1181
Query: 754 QSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHVNARCELKSAPRRLDSWLV 575
S T E +L+ K P + + + A+ V D+ S + ++ + R L
Sbjct: 1182 GSQTSCHEQNLKVKVPITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLN 1241
Query: 574 D---MFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHP 404
D + L+ IL KYP+N+ L+E DK+ LM AL FHP+ + KIG G Q IK+ Y +
Sbjct: 1242 DIQKLSRRLKFILQKYPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYH 1301
Query: 403 ESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
+RCF LVR DGT DFSY KCV GA+E P+ ++ R
Sbjct: 1302 NTRCFSLVRTDGTEEDFSYHKCVHGALEIIDPRRARSYQSR 1342
>ref|XP_006653694.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Oryza
brachyantha]
Length = 1386
Score = 317 bits (811), Expect = 2e-83
Identities = 159/342 (46%), Positives = 222/342 (64%), Gaps = 1/342 (0%)
Frame = -2
Query: 1288 KLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPNNLYDVFRAFGIDAAWKHFLG 1109
+L ++V MSE+C+ GKFW+ +Q+ACI I++LIDWE SRP LYDVF ++GID+AWK F+
Sbjct: 1039 ELVVRVDMSEHCKSGKFWATLQNACIPIMELIDWERSRPERLYDVFCSYGIDSAWKFFVE 1098
Query: 1108 HLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLKYQRDQTSISTPFSQACFSNP 929
L+S T +GR + ++HLL++ADCLSV+G+FHGL+++GLK QR SIS+PFS+ACFS P
Sbjct: 1099 SLRSTTDAIGRNIRRQHLLVVADCLSVSGQFHGLSSQGLKQQRTSLSISSPFSEACFSRP 1158
Query: 928 GNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDILYSGKGQKLGGLVGIYETLQS 749
+ FI AAK+ D L GTLDA+AWGKE GT G F ILYSGK + IY L +
Sbjct: 1159 AHSFINAAKKDSVDKLSGTLDAIAWGKEPCTGTSGPFKILYSGKSHETKQKENIYNFLHN 1218
Query: 748 HTISQEDDLERKQPHSHDELSKNWRARAVCECDDT-KSGHVNARCELKSAPRRLDSWLVD 572
I + E + WR+ E T G ++ + A + ++D
Sbjct: 1219 PEIQAFEKNLMDTHRKRTEKTSKWRSALNSEGITTINGGSISVNQKFLGAKVGIWENIID 1278
Query: 571 MFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAKIGSGPQEIKIGYSPSHPESRC 392
M L+++L +Y +N+ + E+DKS L++AL FHP+ KIG+G +EIKIG +P HP SRC
Sbjct: 1279 MRTCLQNMLREYTLNDIVTEQDKSCLIEALKFHPRGFDKIGAGIREIKIGVNPGHPNSRC 1338
Query: 391 FMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKRLFKRS 266
F+++RND T DFSY KCV+GA SP+L +K L R+
Sbjct: 1339 FIVLRNDDTTADFSYNKCVLGAANSVSPELGSYIEKILSNRA 1380
>ref|XP_009797468.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana sylvestris]
Length = 1254
Score = 316 bits (809), Expect = 3e-83
Identities = 160/359 (44%), Positives = 231/359 (64%), Gaps = 5/359 (1%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P K + +L+L+VFMSE+C R FW+A+ D+C+ I+DLIDWE S P+
Sbjct: 882 VDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPD 941
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+ A+G+D AWK+FL +L SA S+ G+ + EHL++ ADCL+ TGEF LN KGL
Sbjct: 942 NVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLA 1001
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR + +PF QACFS+PG+ F++AAK ++DDL G+L+A+AWGK GTG SFDI+
Sbjct: 1002 QQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDII 1061
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG + +Y L +H S + ++ ++ K AR +C+ DD +
Sbjct: 1062 YSGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDEDNETADKA-LARRLCKLDDLNT--- 1117
Query: 628 NARCELKSAPRRLDSWL-----VDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQS 464
RC+ + + L S+L + +L+ +L KY ++ L+E DKS++M AL FHP+
Sbjct: 1118 -KRCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRR 1176
Query: 463 NAKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFK 287
+ KIG G EIKIGY + +SRCFMLVR DGT+ DFSYRKC+ A+E +P+ +K
Sbjct: 1177 SEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYK 1235
>ref|XP_009797463.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503797|ref|XP_009797464.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
gi|698503800|ref|XP_009797465.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1 isoform X1 [Nicotiana
sylvestris] gi|698503802|ref|XP_009797466.1| PREDICTED:
DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana sylvestris] gi|698503804|ref|XP_009797467.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1
isoform X1 [Nicotiana sylvestris]
Length = 1447
Score = 316 bits (809), Expect = 3e-83
Identities = 160/359 (44%), Positives = 231/359 (64%), Gaps = 5/359 (1%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P K + +L+L+VFMSE+C R FW+A+ D+C+ I+DLIDWE S P+
Sbjct: 1075 VDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPD 1134
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+ A+G+D AWK+FL +L SA S+ G+ + EHL++ ADCL+ TGEF LN KGL
Sbjct: 1135 NVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLA 1194
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR + +PF QACFS+PG+ F++AAK ++DDL G+L+A+AWGK GTG SFDI+
Sbjct: 1195 QQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDII 1254
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG + +Y L +H S + ++ ++ K AR +C+ DD +
Sbjct: 1255 YSGKGYEPAAPTDVYALLGNHVTSNKQQVKVTLDEDNETADKA-LARRLCKLDDLNT--- 1310
Query: 628 NARCELKSAPRRLDSWL-----VDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQS 464
RC+ + + L S+L + +L+ +L KY ++ L+E DKS++M AL FHP+
Sbjct: 1311 -KRCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRR 1369
Query: 463 NAKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFK 287
+ KIG G EIKIGY + +SRCFMLVR DGT+ DFSYRKC+ A+E +P+ +K
Sbjct: 1370 SEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYK 1428
>ref|XP_009593318.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Nicotiana tomentosiformis]
Length = 1211
Score = 316 bits (809), Expect = 3e-83
Identities = 160/359 (44%), Positives = 230/359 (64%), Gaps = 5/359 (1%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P K + +L+L+VFMSE+C R FW+A+ D+C+ I+DLIDWE S P+
Sbjct: 839 VDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPD 898
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+ A+G+D AWK+FL +L SA S+ G+ + EHL++ ADCL+ TGEF LN KGL
Sbjct: 899 NVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLA 958
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR + +PF QACFS+PG+ F++AAK ++DDL G+L+A+AWGK GTG SFDI+
Sbjct: 959 QQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDII 1018
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG + +Y L +H S ++ ++ K AR +C+ DD +
Sbjct: 1019 YSGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDEDNETADKA-LARRLCKLDDLNT--- 1074
Query: 628 NARCELKSAPRRLDSWL-----VDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQS 464
RC+ + + L S+L + +L+ +L KY ++ L+E DKS++M AL FHP+
Sbjct: 1075 -KRCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRR 1133
Query: 463 NAKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFK 287
+ KIG G EIKIGY + +SRCFMLVR DGT+ DFSYRKC+ A+E +P+ +K
Sbjct: 1134 SEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYK 1192
>ref|XP_009593317.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Nicotiana tomentosiformis]
Length = 1447
Score = 316 bits (809), Expect = 3e-83
Identities = 160/359 (44%), Positives = 230/359 (64%), Gaps = 5/359 (1%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P K + +L+L+VFMSE+C R FW+A+ D+C+ I+DLIDWE S P+
Sbjct: 1075 VDILWRELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEQSHPD 1134
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N++D+ A+G+D AWK+FL +L SA S+ G+ + EHL++ ADCL+ TGEF LN KGL
Sbjct: 1135 NVHDLTVAYGVDVAWKYFLRNLNSAVSETGKKILLEHLVLAADCLTATGEFVPLNTKGLA 1194
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR + +PF QACFS+PG+ F++AAK ++DDL G+L+A+AWGK GTG SFDI+
Sbjct: 1195 QQRKCAGVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDII 1254
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG + +Y L +H S ++ ++ K AR +C+ DD +
Sbjct: 1255 YSGKGYEPAAPTDVYALLGNHVTSNRQQVKVTLDEDNETADKA-LARRLCKLDDLNT--- 1310
Query: 628 NARCELKSAPRRLDSWL-----VDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQS 464
RC+ + + L S+L + +L+ +L KY ++ L+E DKS++M AL FHP+
Sbjct: 1311 -KRCKSQWSIANLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRR 1369
Query: 463 NAKIGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFK 287
+ KIG G EIKIGY + +SRCFMLVR DGT+ DFSYRKC+ A+E +P+ +K
Sbjct: 1370 SEKIGKGAMEIKIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYK 1428
>ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Jatropha curcas]
Length = 1453
Score = 313 bits (803), Expect = 1e-82
Identities = 167/358 (46%), Positives = 232/358 (64%), Gaps = 2/358 (0%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P+ K HN +L+L+V MS + + W+ + D C+ I+D+IDW S +
Sbjct: 1096 VDILWNERPRIQKSHNRSYGELYLRVSMSGRSDKTRLWNLLVDHCLPIMDMIDWTRSHSD 1155
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+ D A+GIDA W+ FL +LKSA SDVG+++ EHL+++A+CLSVTGEF GLNAKG K
Sbjct: 1156 NIRDFCLAYGIDAGWEFFLNNLKSAISDVGKSVLPEHLILVANCLSVTGEFVGLNAKGWK 1215
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR+ S+ +PF QACFS+PG+CFIKAAK V DDL G+LDA+AWGK PVGT G FDI+
Sbjct: 1216 RQREHASVLSPFVQACFSSPGSCFIKAAKGGVMDDLRGSLDALAWGKTPPVGT-GQFDII 1274
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG +L V +Y+ L S +++ + E + P + S + + V DD
Sbjct: 1275 YSGKGFELSKPVDVYDLLGSQMSAEKQNYEFEVPFTRGCKSDKYGPQFVYNTDDYVPKGT 1334
Query: 628 NARCELKSAPRRLDSW--LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAK 455
R RRL ++ + + +L IL+KYP++ LNE DK LM AL FHP+ + K
Sbjct: 1335 LERL------RRLLTYNDIHRLSQALSKILNKYPVDQQLNEADKCTLMSALYFHPRRDEK 1388
Query: 454 IGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
IGSG Q+IK+ P + SRCF +VR DGT+ DFSYRKCV GA+E +P+ ++++
Sbjct: 1389 IGSGAQDIKVVNHPEYQGSRCFSVVRTDGTIEDFSYRKCVHGALEIIAPQKARRYREK 1446
>gb|KDP25521.1| hypothetical protein JCGZ_20677 [Jatropha curcas]
Length = 942
Score = 313 bits (803), Expect = 1e-82
Identities = 167/358 (46%), Positives = 232/358 (64%), Gaps = 2/358 (0%)
Frame = -2
Query: 1348 VDILWEDHPKAFKFHNCCSKKLFLKVFMSENCQRGKFWSAVQDACIQIVDLIDWEHSRPN 1169
VDILW + P+ K HN +L+L+V MS + + W+ + D C+ I+D+IDW S +
Sbjct: 585 VDILWNERPRIQKSHNRSYGELYLRVSMSGRSDKTRLWNLLVDHCLPIMDMIDWTRSHSD 644
Query: 1168 NLYDVFRAFGIDAAWKHFLGHLKSATSDVGRTMHQEHLLILADCLSVTGEFHGLNAKGLK 989
N+ D A+GIDA W+ FL +LKSA SDVG+++ EHL+++A+CLSVTGEF GLNAKG K
Sbjct: 645 NIRDFCLAYGIDAGWEFFLNNLKSAISDVGKSVLPEHLILVANCLSVTGEFVGLNAKGWK 704
Query: 988 YQRDQTSISTPFSQACFSNPGNCFIKAAKERVADDLCGTLDAVAWGKEAPVGTGGSFDIL 809
QR+ S+ +PF QACFS+PG+CFIKAAK V DDL G+LDA+AWGK PVGT G FDI+
Sbjct: 705 RQREHASVLSPFVQACFSSPGSCFIKAAKGGVMDDLRGSLDALAWGKTPPVGT-GQFDII 763
Query: 808 YSGKGQKLGGLVGIYETLQSHTISQEDDLERKQPHSHDELSKNWRARAVCECDDTKSGHV 629
YSGKG +L V +Y+ L S +++ + E + P + S + + V DD
Sbjct: 764 YSGKGFELSKPVDVYDLLGSQMSAEKQNYEFEVPFTRGCKSDKYGPQFVYNTDDYVPKGT 823
Query: 628 NARCELKSAPRRLDSW--LVDMFVSLRDILHKYPMNNYLNEEDKSLLMKALIFHPQSNAK 455
R RRL ++ + + +L IL+KYP++ LNE DK LM AL FHP+ + K
Sbjct: 824 LERL------RRLLTYNDIHRLSQALSKILNKYPVDQQLNEADKCTLMSALYFHPRRDEK 877
Query: 454 IGSGPQEIKIGYSPSHPESRCFMLVRNDGTLVDFSYRKCVMGAVEQYSPKLVPIFKKR 281
IGSG Q+IK+ P + SRCF +VR DGT+ DFSYRKCV GA+E +P+ ++++
Sbjct: 878 IGSGAQDIKVVNHPEYQGSRCFSVVRTDGTIEDFSYRKCVHGALEIIAPQKARRYREK 935