BLASTX nr result

ID: Cinnamomum23_contig00015393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00015393
         (646 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010273663.1| PREDICTED: general transcription factor IIH ...   103   8e-20
ref|XP_008802071.1| PREDICTED: general transcription factor IIH ...   100   5e-19
ref|XP_008802070.1| PREDICTED: general transcription factor IIH ...   100   5e-19
ref|XP_008802068.1| PREDICTED: general transcription factor IIH ...   100   5e-19
ref|XP_010916573.1| PREDICTED: general transcription factor IIH ...   100   6e-19
ref|XP_010916570.1| PREDICTED: general transcription factor IIH ...   100   6e-19
ref|XP_010916569.1| PREDICTED: general transcription factor IIH ...   100   6e-19
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...    98   3e-18
ref|XP_009363173.1| PREDICTED: general transcription factor IIH ...    98   3e-18
ref|XP_008391898.1| PREDICTED: general transcription factor IIH ...    98   3e-18
emb|CBI19033.3| unnamed protein product [Vitis vinifera]               98   3e-18
ref|XP_008219657.1| PREDICTED: general transcription factor IIH ...    96   1e-17
ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prun...    96   1e-17
gb|KJB59110.1| hypothetical protein B456_009G245300 [Gossypium r...    96   2e-17
gb|KJB59107.1| hypothetical protein B456_009G245300 [Gossypium r...    96   2e-17
ref|XP_012445877.1| PREDICTED: general transcription factor IIH ...    96   2e-17
ref|XP_010065813.1| PREDICTED: general transcription factor IIH ...    96   2e-17
ref|XP_007019036.1| Basal transcription factor complex subunit-r...    96   2e-17
ref|XP_010530197.1| PREDICTED: general transcription factor IIH ...    96   2e-17
ref|XP_011101336.1| PREDICTED: general transcription factor IIH ...    95   4e-17

>ref|XP_010273663.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Nelumbo nucifera]
          Length = 303

 Score =  103 bits (257), Expect = 8e-20
 Identities = 44/55 (80%), Positives = 49/55 (89%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTDA 481
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA+  +T   DRKRKTT++
Sbjct: 249 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAHSSATTTSDRKRKTTES 303


>ref|XP_008802071.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Phoenix dactylifera] gi|672164394|ref|XP_008802073.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X3 [Phoenix dactylifera]
          Length = 459

 Score =  100 bits (250), Expect = 5e-19
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD++   DRKRK ++
Sbjct: 254 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDRKRKVSE 307


>ref|XP_008802070.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Phoenix dactylifera]
          Length = 470

 Score =  100 bits (250), Expect = 5e-19
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD++   DRKRK ++
Sbjct: 249 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDRKRKVSE 302


>ref|XP_008802068.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Phoenix dactylifera] gi|672164388|ref|XP_008802069.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X1 [Phoenix dactylifera]
          Length = 475

 Score =  100 bits (250), Expect = 5e-19
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD++   DRKRK ++
Sbjct: 254 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDRKRKVSE 307


>ref|XP_010916573.1| PREDICTED: general transcription factor IIH subunit 3 isoform X5
           [Elaeis guineensis]
          Length = 277

 Score =  100 bits (249), Expect = 6e-19
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD+    DRKRK ++
Sbjct: 223 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDANATSDRKRKVSE 276


>ref|XP_010916570.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Elaeis guineensis]
          Length = 300

 Score =  100 bits (249), Expect = 6e-19
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD+    DRKRK ++
Sbjct: 246 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDANATSDRKRKVSE 299


>ref|XP_010916569.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Elaeis guineensis]
          Length = 305

 Score =  100 bits (249), Expect = 6e-19
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG++CSVCLSIFCKHHKKCSTCGS FNQ+ PD+    DRKRK ++
Sbjct: 251 CFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDANATSDRKRKVSE 304


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera]
          Length = 303

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 42/54 (77%), Positives = 44/54 (81%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D     DRKRKT +
Sbjct: 249 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRKTPE 302


>ref|XP_009363173.1| PREDICTED: general transcription factor IIH subunit 3 [Pyrus x
           bretschneideri] gi|694371047|ref|XP_009363174.1|
           PREDICTED: general transcription factor IIH subunit 3
           [Pyrus x bretschneideri]
           gi|694371051|ref|XP_009363175.1| PREDICTED: general
           transcription factor IIH subunit 3 [Pyrus x
           bretschneideri]
          Length = 297

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D++   +RKRKT +
Sbjct: 243 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTSNRKRKTPE 296


>ref|XP_008391898.1| PREDICTED: general transcription factor IIH subunit 3 [Malus
           domestica] gi|657998960|ref|XP_008391899.1| PREDICTED:
           general transcription factor IIH subunit 3 [Malus
           domestica]
          Length = 297

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D++   +RKRKT +
Sbjct: 243 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTSNRKRKTPE 296


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 42/54 (77%), Positives = 44/54 (81%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D     DRKRKT +
Sbjct: 243 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRKRKTPE 296


>ref|XP_008219657.1| PREDICTED: general transcription factor IIH subunit 3 [Prunus mume]
          Length = 296

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D     ++KRKT +
Sbjct: 242 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKRKTPE 295


>ref|XP_007223251.1| hypothetical protein PRUPE_ppa009386mg [Prunus persica]
           gi|462420187|gb|EMJ24450.1| hypothetical protein
           PRUPE_ppa009386mg [Prunus persica]
          Length = 295

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  D     ++KRKT +
Sbjct: 241 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDVNSTSNKKRKTPE 294


>gb|KJB59110.1| hypothetical protein B456_009G245300 [Gossypium raimondii]
          Length = 291

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  ++    D+KRKT +
Sbjct: 237 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASASDKKRKTPE 290


>gb|KJB59107.1| hypothetical protein B456_009G245300 [Gossypium raimondii]
           gi|763792112|gb|KJB59108.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
           gi|763792113|gb|KJB59109.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
           gi|763792115|gb|KJB59111.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
           gi|763792116|gb|KJB59112.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
          Length = 211

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  ++    D+KRKT +
Sbjct: 157 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASASDKKRKTPE 210


>ref|XP_012445877.1| PREDICTED: general transcription factor IIH subunit 3 [Gossypium
           raimondii] gi|823226126|ref|XP_012445878.1| PREDICTED:
           general transcription factor IIH subunit 3 [Gossypium
           raimondii] gi|763792108|gb|KJB59104.1| hypothetical
           protein B456_009G245300 [Gossypium raimondii]
           gi|763792109|gb|KJB59105.1| hypothetical protein
           B456_009G245300 [Gossypium raimondii]
          Length = 296

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  ++    D+KRKT +
Sbjct: 242 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASASDKKRKTPE 295


>ref|XP_010065813.1| PREDICTED: general transcription factor IIH subunit 3 [Eucalyptus
           grandis] gi|629097712|gb|KCW63477.1| hypothetical
           protein EUGRSUZ_G01112 [Eucalyptus grandis]
           gi|629097713|gb|KCW63478.1| hypothetical protein
           EUGRSUZ_G01112 [Eucalyptus grandis]
           gi|629097714|gb|KCW63479.1| hypothetical protein
           EUGRSUZ_G01112 [Eucalyptus grandis]
          Length = 296

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHKKTIDMG+ICSVCLSIFCKHHKKCSTCGSVF Q + ++   P++KRK  D
Sbjct: 242 CFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQPHSEAASEPNKKRKAGD 295


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKTTD 484
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF QA  ++    D+KRKT +
Sbjct: 242 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSEAASTSDKKRKTPE 295


>ref|XP_010530197.1| PREDICTED: general transcription factor IIH subunit 3 [Tarenaya
           hassleriana]
          Length = 298

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 43/56 (76%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPD-STLIPDRKRKTTDA 481
           CFCHK TIDMG+ICSVCLSIFCKHHKKCSTCGSVF Q+  D S+   D+KRKT DA
Sbjct: 242 CFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQSKLDESSSASDKKRKTPDA 297


>ref|XP_011101336.1| PREDICTED: general transcription factor IIH subunit 3 [Sesamum
           indicum] gi|747106105|ref|XP_011101337.1| PREDICTED:
           general transcription factor IIH subunit 3 [Sesamum
           indicum]
          Length = 292

 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 41/52 (78%), Positives = 43/52 (82%)
 Frame = -2

Query: 645 CFCHKKTIDMGFICSVCLSIFCKHHKKCSTCGSVFNQANPDSTLIPDRKRKT 490
           CFCHK TIDMG+ICSVCLSIFCKH KKCSTCGSVF QA    +  PDRKRKT
Sbjct: 237 CFCHKNTIDMGYICSVCLSIFCKHQKKCSTCGSVFGQAPVQDSSTPDRKRKT 288


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