BLASTX nr result
ID: Cinnamomum23_contig00014283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00014283
(480 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009114860.1| RNA polymerase beta' subunit [Thalictrum cor... 272 7e-71
gb|AGN73971.1| RNA polymerase beta' subunit (chloroplast) [Aconi... 270 3e-70
ref|YP_002836081.1| RNA polymerase beta' subunit [Megaleranthis ... 269 6e-70
gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera] 268 8e-70
ref|YP_784464.1| RNA polymerase beta [Piper cenocladum] gi|12216... 268 8e-70
gb|ADD31167.1| RNA polymerase beta' subunit protein (chloroplast... 268 1e-69
gb|AEX58447.1| RNA polymerase beta (chloroplast) [Theobroma gran... 268 1e-69
gb|ADO64881.2| RNA polymerase beta [Theobroma cacao] gi|37192601... 268 1e-69
ref|YP_004021308.1| RNA polymerase beta [Theobroma cacao] gi|309... 268 1e-69
ref|YP_009132930.1| RNA polymerase beta' subunit (chloroplast) [... 268 1e-69
ref|YP_009092294.1| RNA polymerase beta (chloroplast) [Macadamia... 268 1e-69
gb|AEX94509.1| RNA polymerase beta (chloroplast) [Xeronema calli... 267 2e-69
gb|AEX94463.1| RNA polymerase beta (chloroplast) [Camassia scill... 267 2e-69
ref|YP_784377.1| RNA polymerase beta [Drimys granadensis] gi|122... 267 2e-69
ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [C... 267 2e-69
ref|YP_003433966.1| RNA polymerase beta [Typha latifolia] gi|281... 267 2e-69
gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia] 267 2e-69
gb|AEX94467.1| RNA polymerase beta (chloroplast) [Polianthes sp.... 267 2e-69
gb|AEX94466.1| RNA polymerase beta (chloroplast) [Manfreda virgi... 267 2e-69
gb|AEX94465.1| RNA polymerase beta (chloroplast) [Hosta ventricosa] 267 2e-69
>ref|YP_009114860.1| RNA polymerase beta' subunit [Thalictrum coreanum]
gi|721136296|gb|AIX03507.1| RNA polymerase beta' subunit
[Thalictrum coreanum]
Length = 687
Score = 272 bits (695), Expect = 7e-71
Identities = 135/160 (84%), Positives = 140/160 (87%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 444 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 503
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VH+PLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDML+GLYVLTIGNRRGICANRYN
Sbjct: 504 VHIPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYN 563
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE ++D YFCSSYD L Y+Q
Sbjct: 564 PWNRRNYQNEKIDD---NNHKYTKEPYFCSSYDALGAYRQ 600
>gb|AGN73971.1| RNA polymerase beta' subunit (chloroplast) [Aconitum barbatum var.
puberulum]
Length = 679
Score = 270 bits (690), Expect = 3e-70
Identities = 134/160 (83%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 436 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 495
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VH+PLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDML+GLYVLTIGNRRGICANRYN
Sbjct: 496 VHIPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYN 555
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWN NYQNE ++D YFCSSYD L Y+Q
Sbjct: 556 PWNNRNYQNEKIDD---NNHKYTKEPYFCSSYDALGAYRQ 592
>ref|YP_002836081.1| RNA polymerase beta' subunit [Megaleranthis saniculifolia]
gi|226933873|gb|ACO92006.1| RNA polymerase beta' subunit
[Megaleranthis saniculifolia]
Length = 680
Score = 269 bits (687), Expect = 6e-70
Identities = 134/160 (83%), Positives = 138/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VH+PLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDML+GLYVLTIGNRRGICANRYN
Sbjct: 497 VHIPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWN NYQNE ++D YFCSSYD L Y Q
Sbjct: 557 PWNHRNYQNEKIDD---NNHKYTKEPYFCSSYDALGAYWQ 593
>gb|AAZ03990.1| RNA polymerase beta' chain [Yucca schidigera]
Length = 693
Score = 268 bits (686), Expect = 8e-70
Identities = 137/160 (85%), Positives = 140/160 (87%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 451 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 510
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 511 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 570
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYDVL Y+Q
Sbjct: 571 PYNCGNYQNKTV-DNNYYKYTKKKEPYFCSSYDVLGAYRQ 609
>ref|YP_784464.1| RNA polymerase beta [Piper cenocladum]
gi|122164371|sp|Q06GR9.1|RPOC1_PIPCE RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
(chloroplast) [Piper cenocladum]
gi|112253742|gb|ABI14463.1| RNA polymerase beta [Piper
cenocladum]
Length = 688
Score = 268 bits (686), Expect = 8e-70
Identities = 134/164 (81%), Positives = 140/164 (85%), Gaps = 4/164 (2%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQE+M+GHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEIMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIG PISVPTQDMLIGLYVLTIGNR+G+CANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGSPISVPTQDMLIGLYVLTIGNRQGVCANRYN 556
Query: 120 PWNRINYQNETVN----DXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNETV+ D YFCSSYD L Y+Q
Sbjct: 557 PWNRRNYQNETVDHTKYDRTNYRYTKEKEPYFCSSYDALGAYRQ 600
>gb|ADD31167.1| RNA polymerase beta' subunit protein (chloroplast) [Meliosma aff.
cuneifolia Moore 333]
Length = 703
Score = 268 bits (685), Expect = 1e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P N NYQN+ ++D YFCSSYDVL YQQ
Sbjct: 557 PCNHRNYQNKRIDD-NNEKYTKEKEPYFCSSYDVLGAYQQ 595
>gb|AEX58447.1| RNA polymerase beta (chloroplast) [Theobroma grandiflorum]
Length = 682
Score = 268 bits (685), Expect = 1e-69
Identities = 133/160 (83%), Positives = 138/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLT GNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE + D +FC+SYD + Y+Q
Sbjct: 557 PWNRKNYQNERIAD------KYTKEPFFCNSYDAIGAYRQ 590
>gb|ADO64881.2| RNA polymerase beta [Theobroma cacao] gi|371926010|gb|AEX57799.1|
RNA polymerase beta (chloroplast) [Theobroma cacao]
gi|371926748|gb|AEX58528.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
Length = 682
Score = 268 bits (685), Expect = 1e-69
Identities = 133/160 (83%), Positives = 138/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLT GNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE + D +FC+SYD + Y+Q
Sbjct: 557 PWNRKNYQNERIAD------KYTKEPFFCNSYDAIGAYRQ 590
>ref|YP_004021308.1| RNA polymerase beta [Theobroma cacao] gi|309321258|gb|ADO64801.1|
RNA polymerase beta [Theobroma cacao]
gi|371925928|gb|AEX57718.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926092|gb|AEX57880.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926174|gb|AEX57961.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926256|gb|AEX58042.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926338|gb|AEX58123.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926420|gb|AEX58204.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926502|gb|AEX58285.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
gi|371926584|gb|AEX58366.1| RNA polymerase beta
(chloroplast) [Theobroma cacao]
Length = 682
Score = 268 bits (685), Expect = 1e-69
Identities = 133/160 (83%), Positives = 138/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLT GNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE + D +FC+SYD + Y+Q
Sbjct: 557 PWNRKNYQNERIAD------KYTKEPFFCNSYDAIGAYRQ 590
>ref|YP_009132930.1| RNA polymerase beta' subunit (chloroplast) [Hibiscus syriacus]
gi|802085260|gb|AKA94854.1| RNA polymerase beta' subunit
(chloroplast) [Hibiscus syriacus]
Length = 689
Score = 268 bits (684), Expect = 1e-69
Identities = 132/160 (82%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVM+GHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 441 VWEILQEVMRGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 500
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLT GNRRGICANRYN
Sbjct: 501 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYN 560
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE ++D +FC+SYD + Y+Q
Sbjct: 561 PWNRKNYQNERIDD---NNYKYTREPFFCNSYDAIGAYRQ 597
>ref|YP_009092294.1| RNA polymerase beta (chloroplast) [Macadamia integrifolia]
gi|563321821|gb|AHB38150.1| RNA polymerase beta
(chloroplast) [Macadamia integrifolia]
Length = 682
Score = 268 bits (684), Expect = 1e-69
Identities = 135/160 (84%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLV KGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVRKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDML+GLYVLTIGNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQNE ++D YFCSSYD L Y+Q
Sbjct: 557 PWNRRNYQNERIDD-NNYKYKKKKEPYFCSSYDALGAYRQ 595
>gb|AEX94509.1| RNA polymerase beta (chloroplast) [Xeronema callistemon]
Length = 685
Score = 267 bits (683), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 440 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 499
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 500 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 559
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 560 PYNCRNYQNKTV-DNNNYKYTKGKEPYFCSSYDALGAYRQ 598
>gb|AEX94463.1| RNA polymerase beta (chloroplast) [Camassia scilloides]
Length = 685
Score = 267 bits (683), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 440 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 499
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 500 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 559
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 560 PYNCENYQNKTV-DNNNYKYTKKKEPYFCSSYDALGAYRQ 598
>ref|YP_784377.1| RNA polymerase beta [Drimys granadensis]
gi|122164450|sp|Q06H06.1|RPOC1_DRIGR RecName:
Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
(chloroplast) [Drimys granadensis]
gi|112032653|gb|ABH88288.1| RNA polymerase beta [Drimys
granadensis]
Length = 681
Score = 267 bits (683), Expect = 2e-69
Identities = 134/161 (83%), Positives = 139/161 (86%), Gaps = 1/161 (0%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHP+LLNRAPTLHRLGIQAFQPIL GRAICLHPLV KGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPILLNRAPTLHRLGIQAFQPILAEGRAICLHPLVRKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPIS+PTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISIPTQDMLIGLYVLTIGNRRGICANRYN 556
Query: 120 PWNRINYQNETVND-XXXXXXXXXXXXYFCSSYDVLIVYQQ 1
PWNR NYQN+TV + YFCSSYD L Y+Q
Sbjct: 557 PWNRRNYQNKTVYEYNNNYRYTKEKEPYFCSSYDALGAYRQ 597
>ref|YP_009045557.1| RNA polymerase beta subunit (chloroplast) [Cypripedium macranthos]
gi|578888857|gb|AHI16740.1| RNA polymerase beta subunit
(chloroplast) (chloroplast) [Cypripedium macranthos]
Length = 682
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 437 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 496
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 497 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 556
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 557 PYNCGNYQNKTV-DNNNYKYTKKKEPYFCSSYDALGAYRQ 595
>ref|YP_003433966.1| RNA polymerase beta [Typha latifolia] gi|281371763|gb|ADA63690.1|
RNA polymerase beta [Typha latifolia]
Length = 686
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 441 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 500
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 501 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 560
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 561 PYNCGNYQNKTV-DNNNYRYTKEKEPYFCSSYDALGAYRQ 599
>gb|AAZ03989.1| RNA polymerase beta' chain [Typha latifolia]
Length = 684
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 441 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 500
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 501 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 560
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 561 PYNCGNYQNKTV-DNNNYRYTKEKEPYFCSSYDALGAYRQ 599
>gb|AEX94467.1| RNA polymerase beta (chloroplast) [Polianthes sp. Pires 2011-05]
Length = 683
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 440 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 499
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 500 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 559
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 560 PYNCGNYQNKTV-DNNNYKYTKKKEPYFCSSYDALGAYRQ 598
>gb|AEX94466.1| RNA polymerase beta (chloroplast) [Manfreda virginica]
Length = 683
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 440 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 499
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 500 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 559
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 560 PYNCGNYQNKTV-DNNNYKYTKKKEPYFCSSYDALGAYRQ 598
>gb|AEX94465.1| RNA polymerase beta (chloroplast) [Hosta ventricosa]
Length = 685
Score = 267 bits (682), Expect = 2e-69
Identities = 136/160 (85%), Positives = 139/160 (86%)
Frame = -1
Query: 480 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILGGGRAICLHPLVCKGFNADFDGDQMA 301
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPIL GRAICLHPLVCKGFNADFDGDQMA
Sbjct: 440 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 499
Query: 300 VHVPLSLEAQAEARLLMFSHMNLFSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 121
VHVPLSLEAQAEARLLMFSHMNL SPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN
Sbjct: 500 VHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTIGNRRGICANRYN 559
Query: 120 PWNRINYQNETVNDXXXXXXXXXXXXYFCSSYDVLIVYQQ 1
P+N NYQN+TV D YFCSSYD L Y+Q
Sbjct: 560 PYNCGNYQNKTV-DNNNYKYTKKKEPYFCSSYDALGAYRQ 598