BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00014120
         (2507 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloropl...  1036   0.0  
ref|XP_008807186.1| PREDICTED: twinkle homolog protein, chloropl...  1019   0.0  
ref|XP_008808520.1| PREDICTED: twinkle homolog protein, chloropl...  1010   0.0  
ref|XP_006853301.1| PREDICTED: twinkle homolog protein, chloropl...   967   0.0  
ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloropl...   953   0.0  
ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloropl...   952   0.0  
ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloropl...   946   0.0  
ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloropl...   944   0.0  
ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloropl...   938   0.0  
ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloropl...   937   0.0  
ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [...   935   0.0  
emb|CDP12599.1| unnamed protein product [Coffea canephora]            935   0.0  
ref|XP_009353863.1| PREDICTED: twinkle homolog protein, chloropl...   932   0.0  
ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloropl...   932   0.0  
ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloropl...   929   0.0  
ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloropl...   927   0.0  
ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloropl...   926   0.0  
ref|XP_010053033.1| PREDICTED: twinkle homolog protein, chloropl...   924   0.0  
ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [...   924   0.0  
ref|XP_011039292.1| PREDICTED: twinkle homolog protein, chloropl...   923   0.0  

>ref|XP_010243933.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nelumbo nucifera]
          Length = 769

 Score = 1036 bits (2679), Expect = 0.0
 Identities = 496/702 (70%), Positives = 569/702 (81%), Gaps = 17/702 (2%)
 Frame = -1

Query: 2369 YRLFSHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHG 2190
            + L S N+LMGSK++L+ +P TI +S     HFHT+  LFST+P KP S   H+ +KK G
Sbjct: 67   HTLLSSNILMGSKNLLRSAPFTIPISFSRLHHFHTYRLLFSTSPPKPISIFHHLIVKKSG 126

Query: 2189 FCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGG 2010
            FC  +     R VH+   E E  D  +L  LK +LE  GI C SC+PGQY+ ++CP+C G
Sbjct: 127  FCYMSYARVPRPVHMDYPEEETIDSIRLNALKKRLEMIGIDCTSCRPGQYNHLICPKCEG 186

Query: 2009 GESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKSSKGKPHRVITE 1830
            G+S ERS S+ I +DG  AMW+CFRAKCGWRG  +A   G+ +       K  P R I+E
Sbjct: 187  GDSMERSLSLLITQDGGSAMWTCFRAKCGWRGGAQAFPDGRAFGGANLIPKVMPKREISE 246

Query: 1829 ESLELQPLCDELIAYFAERMISGETLRRNAVMQRS-----------------YLGDQIVI 1701
            ESL L+PLCDEL+AYFAERMISGETLRRNAVMQ+S                 +   +I I
Sbjct: 247  ESLGLEPLCDELLAYFAERMISGETLRRNAVMQKSGKQVCGAIDGKKLSLSSHGNTKIAI 306

Query: 1700 AFTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAG 1521
            AFTYR+NG+L+SCKYRG++K FWQEKDTEKILYG+DDIKQ SDIIIVEGE+DKLSMEEAG
Sbjct: 307  AFTYRQNGKLVSCKYRGVDKVFWQEKDTEKILYGLDDIKQTSDIIIVEGEIDKLSMEEAG 366

Query: 1520 YFNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXX 1341
            + NCVSVPDGAP++VS KELP+  +DTKYQYLWNCKEY++KASRIILATDAD PGQ    
Sbjct: 367  FRNCVSVPDGAPAKVSTKELPSIEKDTKYQYLWNCKEYLDKASRIILATDADPPGQALAE 426

Query: 1340 XXXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSD 1161
                     RCWRV+WPKK+  +VCKDANEVL + GP+AL+EVIE+AELYPI+GLF F D
Sbjct: 427  ELARRLGRERCWRVRWPKKDGGNVCKDANEVLSYYGPDALKEVIENAELYPIRGLFNFKD 486

Query: 1160 YFDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNIN 981
            YFDE+D+YYH S G+E GVSTGW ALN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N
Sbjct: 487  YFDEIDSYYHCSFGYELGVSTGWRALNNLYNVVPGELTIVTGVPNSGKSEWIDALLCNLN 546

Query: 980  RSVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTF 801
             S GWKF LCSMENKVREHARKLLEKH++KPFF+ARYGES+ERMS+EE E GK+WLNDTF
Sbjct: 547  ESDGWKFALCSMENKVREHARKLLEKHLKKPFFSARYGESMERMSVEELELGKEWLNDTF 606

Query: 800  HLIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK 621
            +LIRCEDDCLPS+KWVLELAKA VLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK
Sbjct: 607  YLIRCEDDCLPSVKWVLELAKAVVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK 666

Query: 620  IKRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGP 441
            IKRFAQHHACHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD  AGP
Sbjct: 667  IKRFAQHHACHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPQAGP 726

Query: 440  LDRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 315
            LD+VQIC+RK+RNKVIGNIGDAFLSYNRTTGEF DID+  S+
Sbjct: 727  LDQVQICVRKIRNKVIGNIGDAFLSYNRTTGEFKDIDETPSK 768


>ref|XP_008807186.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Phoenix dactylifera]
          Length = 698

 Score = 1019 bits (2635), Expect = 0.0
 Identities = 497/699 (71%), Positives = 570/699 (81%), Gaps = 8/699 (1%)
 Frame = -1

Query: 2384 MPPLSYR-----LFSHNVLMGSKHM-LKCSPGT-IHLSSIHSRHFHTHLHLFSTNPEKPT 2226
            MPPL  R     L S  ++ GSKH+ ++CS    +  S     H HTH  L   +P  P 
Sbjct: 2    MPPLPRRSLHTLLPSSFLMGGSKHIPMRCSAAAAVPGSPYRLLHLHTHRRLVLQSPRSPN 61

Query: 2225 SKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPG 2046
            SK     LK   F S  P+M ++TVHL   + +  D ++LA LK KL + GI CGSC+PG
Sbjct: 62   SKYLPSCLKSARFFSVGPLMVNKTVHLPKPDDKMVDTERLARLKSKLAEVGIRCGSCQPG 121

Query: 2045 QYSRMLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYS-SLE 1869
            +YSRM CPQC GG S E+SFS+FIRED +LAMWSCFRAKCGWRG  + S   K ++   +
Sbjct: 122  KYSRMTCPQCKGGSSEEKSFSLFIREDLQLAMWSCFRAKCGWRGTAKVSEEVKAHNLRSD 181

Query: 1868 KSSKGKPHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTY 1689
            +  + K HR I+E  L+L+PLC+EL+AYF+ERMIS ETLRRNAVMQR Y  DQIVIAFTY
Sbjct: 182  EPLQVKGHRKISERELQLEPLCEELVAYFSERMISAETLRRNAVMQRKY-NDQIVIAFTY 240

Query: 1688 RRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNC 1509
            RRNG L+ CKYR ++KKFWQE+DTEKI YG+DDIKQA+DIIIVEGE+DKLSMEEAGY NC
Sbjct: 241  RRNGTLVGCKYREVSKKFWQERDTEKIFYGLDDIKQANDIIIVEGEVDKLSMEEAGYRNC 300

Query: 1508 VSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXX 1329
            VSVPDGAP++VS+ E+P E ED K+QYLW CKEY++KASRIILATD D PGQ        
Sbjct: 301  VSVPDGAPAKVSE-EIPNEKEDKKFQYLWTCKEYLDKASRIILATDVDPPGQALAEEIAR 359

Query: 1328 XXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDE 1149
                 RCWRVKWPKKN TDVCKDANEVLM+LGP+ALR+V+E+AELYPI+GLF FSD+F E
Sbjct: 360  RIGKERCWRVKWPKKNSTDVCKDANEVLMYLGPDALRKVVENAELYPIRGLFTFSDFFHE 419

Query: 1148 VDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVG 969
            +DAYYH   GFE GVSTGW AL+ELYNVVPGELT++TGVPNSGKSEWIDALLCNIN S G
Sbjct: 420  IDAYYHCHHGFELGVSTGWKALDELYNVVPGELTVITGVPNSGKSEWIDALLCNINESHG 479

Query: 968  WKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIR 789
            WKFVLCSMENKVR+HARKLLEKHI+KPFFNARYG S+ERMS+EE EQGK+WLND FHLIR
Sbjct: 480  WKFVLCSMENKVRDHARKLLEKHIKKPFFNARYGGSLERMSVEELEQGKEWLNDAFHLIR 539

Query: 788  CEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRF 609
            CEDDCLPSIKWVL LAKAAVLR+GVRGLVIDPYNELDHQRP NQTETEYVSQMLT+IKRF
Sbjct: 540  CEDDCLPSIKWVLTLAKAAVLRYGVRGLVIDPYNELDHQRPANQTETEYVSQMLTRIKRF 599

Query: 608  AQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRV 429
            AQHH+CHVWFVAHPRQLQHW G PPN+YDISGSAHFINKCDNGIV+HRNRD+ AGPLDRV
Sbjct: 600  AQHHSCHVWFVAHPRQLQHWDGCPPNIYDISGSAHFINKCDNGIVIHRNRDKKAGPLDRV 659

Query: 428  QICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASRK 312
            Q+C+RKVRNKVIGNIG+AFLSYNR TGEF+DIDD   +K
Sbjct: 660  QVCVRKVRNKVIGNIGEAFLSYNRITGEFLDIDDKDQKK 698


>ref|XP_008808520.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            isoform X1 [Phoenix dactylifera]
          Length = 699

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 488/687 (71%), Positives = 565/687 (82%), Gaps = 3/687 (0%)
 Frame = -1

Query: 2378 PLSYRLFSHNVLMGSKHM-LKCSPGT-IHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHIS 2205
            PL   L S +++ GSKH+ ++CS    + +S     H HT   L   +  +P SK    S
Sbjct: 8    PLDNLLHSSSLMGGSKHLTVRCSTSAAVPVSPYRLLHLHTRRGLLFQSARRPISKYQPSS 67

Query: 2204 LKKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLC 2025
            LK   F S  PV  S+ VHL   +    D ++LA LK+KLE+ GI CGSC+PGQY+ M C
Sbjct: 68   LKSARFFSVGPVTQSKAVHLPELDDRMIDTERLARLKLKLEEQGIKCGSCQPGQYTHMTC 127

Query: 2024 PQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYS-SLEKSSKGKP 1848
            PQC GG S ++SFS+FIRED ELA+WSCFRAKCGWRG  +AS   K  +  +++  + K 
Sbjct: 128  PQCKGGPSEDKSFSLFIREDLELAVWSCFRAKCGWRGVAKASGEAKASNLGVDQPLQVKE 187

Query: 1847 HRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLI 1668
            +R I+E  L+L+PLC+EL+AYF+ERMIS ETLRRNAVMQR Y  +QIVIAF+YRRNG L+
Sbjct: 188  YRKISERDLQLEPLCEELVAYFSERMISAETLRRNAVMQRIY-NNQIVIAFSYRRNGTLV 246

Query: 1667 SCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGA 1488
             CKYR ++K+FWQE+DTEK  YG+DDIKQ +DIIIVEGEMDKLSMEEAGY NCVSVPDGA
Sbjct: 247  GCKYRAVSKQFWQERDTEKFFYGLDDIKQGNDIIIVEGEMDKLSMEEAGYRNCVSVPDGA 306

Query: 1487 PSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRC 1308
            P++VS  ++P E ED K+QYLW CKEY+EKASRIILATDAD PGQ             RC
Sbjct: 307  PAKVSD-DMPVEKEDKKFQYLWTCKEYLEKASRIILATDADPPGQALAEEIARRVGKERC 365

Query: 1307 WRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHR 1128
            WRVKWPKKN TDVCKDANEVLM+LGP+ALR+VIE+AELYPI+GL  FSD+F E+DAYYH 
Sbjct: 366  WRVKWPKKNSTDVCKDANEVLMYLGPDALRKVIENAELYPIRGLLSFSDFFHEIDAYYHC 425

Query: 1127 SLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCS 948
            + GFE GVSTGW AL+ELYNVVPGELT++TGVPNSGKSEWIDALLCNI+ S GWKFVLCS
Sbjct: 426  NYGFELGVSTGWKALDELYNVVPGELTVITGVPNSGKSEWIDALLCNISESHGWKFVLCS 485

Query: 947  MENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLP 768
            MENKVREHARKLLEKH++KPFFNARYG SVERMS+EE EQGKKWL+DTFHLIRCED CLP
Sbjct: 486  MENKVREHARKLLEKHVKKPFFNARYGGSVERMSVEELEQGKKWLDDTFHLIRCEDACLP 545

Query: 767  SIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACH 588
            SIKWVL LAKAAVLR+GVRGLVIDPYNELDHQRP NQTETEYVSQMLT+IKRFAQHH+CH
Sbjct: 546  SIKWVLTLAKAAVLRYGVRGLVIDPYNELDHQRPANQTETEYVSQMLTRIKRFAQHHSCH 605

Query: 587  VWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKV 408
            VWFVAHPRQLQHW GGPPN+YDISGSAHFINKCDNGIV+HRNRD+NAGPLD VQ+C+RKV
Sbjct: 606  VWFVAHPRQLQHWGGGPPNMYDISGSAHFINKCDNGIVIHRNRDKNAGPLDLVQVCVRKV 665

Query: 407  RNKVIGNIGDAFLSYNRTTGEFVDIDD 327
            RNKVIG+IG+AFLSYNR TGEF+DIDD
Sbjct: 666  RNKVIGHIGEAFLSYNRVTGEFMDIDD 692


>ref|XP_006853301.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Amborella trichopoda] gi|548856954|gb|ERN14768.1|
            hypothetical protein AMTR_s00032p00034370 [Amborella
            trichopoda]
          Length = 689

 Score =  967 bits (2500), Expect = 0.0
 Identities = 474/687 (68%), Positives = 551/687 (80%), Gaps = 17/687 (2%)
 Frame = -1

Query: 2342 MGSKHML---KCSPGTIHL---SSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCS 2181
            MGSKH L   + SPG+  L     I   H  +   L   NP KP S +  +SLK+    S
Sbjct: 1    MGSKHFLSNPQVSPGSSRLLFFCLIRPLHTGSSAGLLFGNPTKPISTLRLVSLKRPRLAS 60

Query: 2180 FAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGES 2001
              PVM  R VH++  E +    ++L++L+ KL+  GI C SC PGQYS MLCP+C GG +
Sbjct: 61   LRPVMIKRAVHVERQEVDNVVPERLSLLREKLKNEGIICDSCTPGQYSNMLCPKCEGGST 120

Query: 2000 RERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKS----------SKGK 1851
            RERSFS+FIREDG +A+W+CFR KCGWRGH++AS +   Y+  E++          SK K
Sbjct: 121  RERSFSLFIREDGSMALWTCFRGKCGWRGHIQASSNAS-YAPAERNEKKQINGDLNSKKK 179

Query: 1850 PHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQL 1671
            P RV+TE+SL L+PLC E++AYF+ERMIS ETLRRN VMQR  + DQ VIAF YRR+G++
Sbjct: 180  PSRVLTEKSLGLEPLCPEILAYFSERMISPETLRRNGVMQRK-MSDQNVIAFPYRRDGRI 238

Query: 1670 ISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDG 1491
            ++CKYR I K F+QE+DTE++LYG+DDIK ASDIIIVEGEMDKLSMEE GY NCVSVPDG
Sbjct: 239  VNCKYRDIEKNFFQERDTERVLYGLDDIKNASDIIIVEGEMDKLSMEEVGYLNCVSVPDG 298

Query: 1490 APSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXR 1311
            AP++VS+KELP   +DTKYQ+LW  KEY +KASRIILATDAD PGQ             R
Sbjct: 299  APAKVSEKELPPIEKDTKYQFLWKYKEYFQKASRIILATDADVPGQSLAEELARRVGRER 358

Query: 1310 CWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYH 1131
            CWRV WPKKN+ +VCKDANEVLM LGP+ALR+VIE+AELYPI+GLFRF DYFDE+DAYYH
Sbjct: 359  CWRVSWPKKNEIEVCKDANEVLMHLGPQALRDVIENAELYPIRGLFRFDDYFDEIDAYYH 418

Query: 1130 RSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLC 951
            R LG E GVSTGW +L++LYNVVPGELTIVTGVPNSGKSEWIDAL+CNIN   GW F LC
Sbjct: 419  RILGNELGVSTGWRSLDDLYNVVPGELTIVTGVPNSGKSEWIDALICNINAREGWTFALC 478

Query: 950  SMENKVREHARKLLEKHIRKPFF-NARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDC 774
            SMENKVREHARKLLEKHI+KPFF N+RYG+S+ RMS +E  +GK+WL+DTFHLIR EDD 
Sbjct: 479  SMENKVREHARKLLEKHIKKPFFENSRYGDSIPRMSRDELREGKQWLSDTFHLIRYEDDS 538

Query: 773  LPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHA 594
            LPSIKWV++LAKAAVLR+GVRGLVIDPYNELDHQRPPNQTETEYVSQMLT +KRFAQHH 
Sbjct: 539  LPSIKWVIDLAKAAVLRYGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTLVKRFAQHHQ 598

Query: 593  CHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIR 414
            CHVWFVAHPRQLQ+W GG PNLYDISGSAHFINKCDNGIVVHRNRD +AGPLDRVQIC+R
Sbjct: 599  CHVWFVAHPRQLQNWNGGAPNLYDISGSAHFINKCDNGIVVHRNRDPDAGPLDRVQICVR 658

Query: 413  KVRNKVIGNIGDAFLSYNRTTGEFVDI 333
            KVRNKV GNIGDAFLSY RTTGEF D+
Sbjct: 659  KVRNKVSGNIGDAFLSYRRTTGEFKDV 685


>ref|XP_009779935.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Nicotiana sylvestris]
          Length = 699

 Score =  953 bits (2463), Expect = 0.0
 Identities = 476/691 (68%), Positives = 545/691 (78%), Gaps = 10/691 (1%)
 Frame = -1

Query: 2357 SHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLH-----LFSTNPEKPTSKI---PHISL 2202
            S+N  MGSK+ L     TIH + I      THL      +FST   KP S I    ++S 
Sbjct: 14   SNNFAMGSKYFLHKPSITIHKTIIPVLSSKTHLFQNQRLIFSTFASKPISPIRGTSNLSY 73

Query: 2201 KKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCP 2022
            + H      P   S  V   P EG   + + +  LK KL + GI  GSC PGQYS +LCP
Sbjct: 74   RPHRI----PPPVSGVVLEDPVEGI-AESEHVKALKEKLSQVGIDIGSCGPGQYSGLLCP 128

Query: 2021 QCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYSSLEKSSK-GKP 1848
             C GG+S E+S S+FI +DG  A W+CFRAKCGWRG  RA    K  ++ +++  K  K 
Sbjct: 129  MCTGGDSNEKSLSLFITQDGHAATWTCFRAKCGWRGGTRAFADVKTAFADMKRIGKVTKK 188

Query: 1847 HRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLI 1668
            +R ITEESL L+PLCD L++YF+ERMIS ETLRRNAVMQR Y GDQIVIAFTYRR+G L+
Sbjct: 189  YRQITEESLGLEPLCDVLLSYFSERMISRETLRRNAVMQRRY-GDQIVIAFTYRRDGALV 247

Query: 1667 SCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGA 1488
            SCKYR I KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGA
Sbjct: 248  SCKYRDITKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGA 307

Query: 1487 PSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRC 1308
            P  VS KELP   +DTKYQYLWNCKEY+EKASRIILATD D PGQ             RC
Sbjct: 308  PPVVSDKELPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQALAEELARRLGRERC 367

Query: 1307 WRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHR 1128
            WRV WPKK+  D  KDANEVLM+LGP ALREVIE AELYPI+GLF F DYF E+DAYYH+
Sbjct: 368  WRVTWPKKSTKDRFKDANEVLMYLGPGALREVIEGAELYPIQGLFNFKDYFTEIDAYYHQ 427

Query: 1127 SLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCS 948
            ++G+E GVSTGW +LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N+SVGWKF LCS
Sbjct: 428  TIGYELGVSTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNQSVGWKFALCS 487

Query: 947  MENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLP 768
            MENKVR+HARKLLEKHI+KPFF+ RYGESV+RMS +EFE+GK+WL+DTF LIRCE+DCLP
Sbjct: 488  MENKVRDHARKLLEKHIKKPFFDVRYGESVQRMSAQEFEEGKQWLSDTFFLIRCENDCLP 547

Query: 767  SIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACH 588
            +I WVL LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CH
Sbjct: 548  NIDWVLSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCH 607

Query: 587  VWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKV 408
            VWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKV
Sbjct: 608  VWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKV 667

Query: 407  RNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 315
            RNKV G IGDAFLSY+R TGEF+D+D+  S+
Sbjct: 668  RNKVSGTIGDAFLSYDRVTGEFMDLDEHPSK 698


>ref|XP_011096707.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 628

 Score =  952 bits (2462), Expect = 0.0
 Identities = 454/613 (74%), Positives = 518/613 (84%), Gaps = 2/613 (0%)
 Frame = -1

Query: 2153 VHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESRERSFSIFI 1974
            V ++  E +  D   L +L+ KL++ G    +C PGQY+ +LCP C GG+S E+S S+ I
Sbjct: 10   VDVETLEKQLVDEKLLIMLRKKLQEIGFDGNACMPGQYNGLLCPSCKGGDSEEKSLSLHI 69

Query: 1973 REDGELAMWSCFRAKCGWRGHMRASVHGKG-YSSLEKSSKGKPH-RVITEESLELQPLCD 1800
             EDG  A+W+CFRAKCGW+G  RA    +  + ++ K ++ K   R+ITEESL L+PLC+
Sbjct: 70   TEDGSAAVWTCFRAKCGWKGTTRAYADVRSTFETMSKITRIKQATRIITEESLGLEPLCN 129

Query: 1799 ELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKKFWQEKD 1620
            EL+AYFAERMISGETLRRNAV+Q+   G+QIVIAFTYRRNG+L+SCKYR I KKFWQE D
Sbjct: 130  ELLAYFAERMISGETLRRNAVLQKR-TGNQIVIAFTYRRNGELVSCKYRDITKKFWQEAD 188

Query: 1619 TEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELPAEGEDT 1440
            TEKI YG+DDIK+ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP +VS K LP+E EDT
Sbjct: 189  TEKIFYGLDDIKEASDIIIVEGEMDKLAMEEAGFKNCVSVPDGAPPKVSNKALPSEEEDT 248

Query: 1439 KYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKNDTDVCKD 1260
            KY+YLWNCK+Y  KASRIILATD D PGQ             RCWRVKWPKKND++  KD
Sbjct: 249  KYKYLWNCKDYTAKASRIILATDGDPPGQALAEELARRLGRERCWRVKWPKKNDSESFKD 308

Query: 1259 ANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVSTGWMALN 1080
            ANEVLM++GP+ALREVIE+AELYPI+GLF F DYFDE+D YYH+SLGFE GVSTGW ALN
Sbjct: 309  ANEVLMYMGPDALREVIENAELYPIRGLFNFKDYFDEIDDYYHQSLGFELGVSTGWRALN 368

Query: 1079 ELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHARKLLEKH 900
            ELYNVVPGELTIVTGVPNSGKSEWIDALLCNIN SVGWKF LCSMENKVREHARKLLEKH
Sbjct: 369  ELYNVVPGELTIVTGVPNSGKSEWIDALLCNINHSVGWKFALCSMENKVREHARKLLEKH 428

Query: 899  IRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAKAAVLRH 720
            IRKPFF+ RYGESVERMS+EE EQGKKWL+D+F LIRCE+DCLPSI WVL+LA+ AVLRH
Sbjct: 429  IRKPFFDVRYGESVERMSVEELEQGKKWLSDSFSLIRCENDCLPSINWVLDLARIAVLRH 488

Query: 719  GVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQLQHWVGG 540
            GV GLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL +W+GG
Sbjct: 489  GVNGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHGCHVWFVAHPRQLHNWIGG 548

Query: 539  PPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGDAFLSYN 360
            PPN+YDISGSAHFINKCDNGIV+HRNRD  AGP+D VQ+C+RKVRNKVIG IGDA+LSYN
Sbjct: 549  PPNMYDISGSAHFINKCDNGIVIHRNRDPEAGPVDLVQVCVRKVRNKVIGTIGDAYLSYN 608

Query: 359  RTTGEFVDIDDAA 321
            R TGE+ DID AA
Sbjct: 609  RVTGEYSDIDAAA 621


>ref|XP_012827508.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Erythranthe guttatus]
            gi|848927528|ref|XP_012827509.1| PREDICTED: twinkle
            homolog protein, chloroplastic/mitochondrial isoform X2
            [Erythranthe guttatus] gi|604299158|gb|EYU19093.1|
            hypothetical protein MIMGU_mgv1a002055mg [Erythranthe
            guttata]
          Length = 721

 Score =  946 bits (2446), Expect = 0.0
 Identities = 462/696 (66%), Positives = 549/696 (78%), Gaps = 18/696 (2%)
 Frame = -1

Query: 2348 VLMGSKH--MLKCSPGTI---HLSSIHSRHFHTHLHLFSTNPEK--------PTSKIPHI 2208
            + MGSK+  +LK SP  +   H+ S+ SR  ++ +H F +   +        P    P  
Sbjct: 22   IFMGSKNFLLLKFSPTPVTHAHIHSLDSRSCYSQIHFFRSRSNRKNPLLFPSPKHFSPIY 81

Query: 2207 SLKKHGFCSFAPV----MHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQY 2040
              +  G+ SF P     +      ++  E +  D  +L +L+ KL++ GI    C PGQY
Sbjct: 82   QQRSSGY-SFTPSAAIPIPRPIAGVETLEKQSVDKKQLKLLRQKLQEIGIDGTDCLPGQY 140

Query: 2039 SRMLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKG-YSSLEKS 1863
            + ++CP C GG+S+E+S S+ I +DG  A+W+CFRAKCGW+G  RA    K  Y+ +  +
Sbjct: 141  NGLVCPSCKGGDSQEKSLSLHITDDGGAAVWTCFRAKCGWKGTTRAFADVKSTYAKMNTT 200

Query: 1862 SKGKPHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRR 1683
             K K  RVITEESL L+PLC+EL+AYFAERMISGETLRRN VMQ+   G+QIVIAFTYRR
Sbjct: 201  QKVKQPRVITEESLGLEPLCNELLAYFAERMISGETLRRNYVMQKR-TGNQIVIAFTYRR 259

Query: 1682 NGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVS 1503
            N +LISCKYR I KKFWQE +TEKI YG+DDIK+ASD+IIVEGEMDKL+MEEAG+ NCVS
Sbjct: 260  NKELISCKYRDITKKFWQEANTEKIFYGLDDIKEASDVIIVEGEMDKLAMEEAGFKNCVS 319

Query: 1502 VPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXX 1323
            VPDGAP +VS K L +E EDTKY YLWNCK+Y  KASRIILATD D PGQ          
Sbjct: 320  VPDGAPPKVSNKSLASEEEDTKYTYLWNCKDYTAKASRIILATDGDPPGQALAEELARRL 379

Query: 1322 XXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVD 1143
               RCWRVKWPKKNDT+  KDANEVLM++GP+ALR VIE+AELYPIKGLF F DYFDE++
Sbjct: 380  GRERCWRVKWPKKNDTESFKDANEVLMYMGPDALRGVIENAELYPIKGLFNFKDYFDEIN 439

Query: 1142 AYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWK 963
             YYH++LGFE GVSTGW +LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWK
Sbjct: 440  DYYHQTLGFELGVSTGWTSLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNHSVGWK 499

Query: 962  FVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCE 783
            F LCSMENKVREHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GKKWL D+F LIRCE
Sbjct: 500  FALCSMENKVREHARKLLEKHIKKPFFDVRYGESVERMSTKEFERGKKWLGDSFSLIRCE 559

Query: 782  DDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQ 603
            +DCLPSI WVL+LA+ AVLRHGV GLVIDPYNE+DHQRPP+QTETEYVSQMLTKIKRFAQ
Sbjct: 560  NDCLPSITWVLDLARIAVLRHGVNGLVIDPYNEIDHQRPPSQTETEYVSQMLTKIKRFAQ 619

Query: 602  HHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQI 423
            HH+CHVWFVAHPRQLQ+WVG PPNLYDISGSAHFINKCDNGIV+HRNRD  AGP+D VQ+
Sbjct: 620  HHSCHVWFVAHPRQLQNWVGSPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPVDIVQV 679

Query: 422  CIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASR 315
            C+RKVRNKV+G IGDA+LSYNR TGE++DI++ + +
Sbjct: 680  CVRKVRNKVVGTIGDAYLSYNRVTGEYMDINNTSGQ 715


>ref|XP_008225676.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Prunus mume]
          Length = 698

 Score =  944 bits (2440), Expect = 0.0
 Identities = 458/684 (66%), Positives = 540/684 (78%), Gaps = 3/684 (0%)
 Frame = -1

Query: 2375 LSYRLFSHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKK 2196
            LS+   S  +LMG+  + K +P    L+      FH+H  +FS    KP SK   + L+ 
Sbjct: 12   LSFLTSSAGLLMGTVQLFKSTPCPNPLTPSQRHSFHSHRLVFSPLSPKPMSKTRPLCLRT 71

Query: 2195 HGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQC 2016
            +G+   +    +    L+  E ++ D ++L+ LK+KLE  GI  G C PGQY+ ++CP C
Sbjct: 72   NGYSYVSHANGAAPAELENAEEKRVDFNQLSRLKLKLEMLGIDYGICMPGQYNHLICPIC 131

Query: 2015 GGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKSS---KGKPH 1845
             GG+S E+S S++I ED   A W CFR KCGW+G  R +  G    S E S+   K K  
Sbjct: 132  KGGDSEEKSLSVYISEDWGSAFWCCFRGKCGWQG--RTTAVGDNKLSRETSNQIAKVKKK 189

Query: 1844 RVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLIS 1665
            R IT ESL L+PLC+EL+AYF+ER IS ETLRRNAVMQ++  G QI IAF Y R+G L+S
Sbjct: 190  REITVESLGLEPLCEELVAYFSERSISTETLRRNAVMQKT-TGVQICIAFPYWRDGMLVS 248

Query: 1664 CKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAP 1485
            CKYR I KKFWQEKDTE+I YG+DDIK  +DIIIVEGE+DKL+MEEAG+ NCVSVPDGAP
Sbjct: 249  CKYRDIEKKFWQEKDTERIFYGLDDIKGTNDIIIVEGEIDKLAMEEAGFHNCVSVPDGAP 308

Query: 1484 SQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCW 1305
            ++VS K+LPAE +DTKYQYLWNCKEY++KASRIILATD D PGQ             RCW
Sbjct: 309  AKVSSKDLPAEEQDTKYQYLWNCKEYLKKASRIILATDGDEPGQALAEELARRLGRERCW 368

Query: 1304 RVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRS 1125
            RV+WP KND +  KDANEVLM+LGP+ L+EVIE+AELYPI+GLF F++YFDE+DAYY+R+
Sbjct: 369  RVRWPMKNDNEHFKDANEVLMYLGPDVLKEVIENAELYPIRGLFNFANYFDELDAYYYRT 428

Query: 1124 LGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSM 945
            LG+E+GVSTGW  LNELYN+VPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKF LCSM
Sbjct: 429  LGYEYGVSTGWKGLNELYNIVPGELTIVTGVPNSGKSEWIDALLCNLSESVGWKFALCSM 488

Query: 944  ENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPS 765
            ENKVREHARKLLEKHI+KPFF+ RYG S ERMS EEFEQGK+WLNDTF+LIRCEDD LPS
Sbjct: 489  ENKVREHARKLLEKHIKKPFFDKRYGGSAERMSAEEFEQGKQWLNDTFYLIRCEDDSLPS 548

Query: 764  IKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHV 585
            I WVLELA+AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTK+KRFAQHH CHV
Sbjct: 549  ISWVLELAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKVKRFAQHHCCHV 608

Query: 584  WFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVR 405
            WFVAHPRQL  WVGGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG LD+VQ+C+RKVR
Sbjct: 609  WFVAHPRQLHQWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPGAGVLDQVQVCVRKVR 668

Query: 404  NKVIGNIGDAFLSYNRTTGEFVDI 333
            NKV G IGDA+L+Y+R TG+F DI
Sbjct: 669  NKVAGTIGDAYLTYDRATGQFKDI 692


>ref|XP_009353864.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Pyrus x bretschneideri]
          Length = 698

 Score =  938 bits (2424), Expect = 0.0
 Identities = 459/677 (67%), Positives = 541/677 (79%), Gaps = 3/677 (0%)
 Frame = -1

Query: 2348 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2172
            +LM SK +L  +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLNSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2171 VMHSRTVHLQ-PHEGEKTDMDKLAVLKMKLEKAGIACGSCK-PGQYSRMLCPQCGGGESR 1998
               +  V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ ++CP C GG+S 
Sbjct: 82   AHVAEPVEVEAPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNHLICPMCKGGDSE 140

Query: 1997 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKSSKGKPHRVITEESLE 1818
            E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK K  R ITEESL 
Sbjct: 141  EKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKLKKKREITEESLG 197

Query: 1817 LQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKK 1638
            L+PLC+E++ YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+L+SCKYR I+KK
Sbjct: 198  LEPLCEEIVDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGKLVSCKYRDIDKK 256

Query: 1637 FWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELP 1458
            FWQEKDTEKI YG+DDIK  +DIIIVEGE+DKLSMEEAG+ NCVSVPDGAP +VS KELP
Sbjct: 257  FWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLSMEEAGFCNCVSVPDGAPPKVSSKELP 316

Query: 1457 AEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKND 1278
             E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             RCWRVKWPKKND
Sbjct: 317  PEEKDTKYQYLWNCKEYLKKASRIVLATDGDGPGQALAEELARRLGRERCWRVKWPKKND 376

Query: 1277 TDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVST 1098
             +  KDANEVLM+LG + L+ VIEDAEL+PI+GLF F++YFDE+DAYYHR+LG+E+GVST
Sbjct: 377  KENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYYHRTLGYEYGVST 436

Query: 1097 GWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHAR 918
            GW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVLCSMENKVREHAR
Sbjct: 437  GWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVLCSMENKVREHAR 496

Query: 917  KLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAK 738
            KLLEKHI+KPFF+ RYG S ERMS+EEFEQGKKWLNDTF+LIRCEDD LP+I WVL+LA+
Sbjct: 497  KLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDSLPNISWVLDLAQ 556

Query: 737  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQL 558
            AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL
Sbjct: 557  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHCCHVWFVAHPRQL 616

Query: 557  QHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGD 378
              W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+RKVRNKV G IGD
Sbjct: 617  HQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEMDQVQVCVRKVRNKVAGTIGD 676

Query: 377  AFLSYNRTTGEFVDIDD 327
            AFLSY+R TG+F+D+++
Sbjct: 677  AFLSYDRATGQFMDVEN 693


>ref|XP_008383370.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Malus domestica]
          Length = 698

 Score =  937 bits (2421), Expect = 0.0
 Identities = 459/677 (67%), Positives = 541/677 (79%), Gaps = 3/677 (0%)
 Frame = -1

Query: 2348 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2172
            +LM SK +LK +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLKSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2171 VMHSRTVHLQ-PHEGEKTDMDKLAVLKMKLEKAGIACGSCK-PGQYSRMLCPQCGGGESR 1998
               +  V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ ++CP C GG+S 
Sbjct: 82   AHVAEPVEVETPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNHLICPMCKGGDSE 140

Query: 1997 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKSSKGKPHRVITEESLE 1818
            E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK K    ITEESL 
Sbjct: 141  EKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKLKKKXXITEESLG 197

Query: 1817 LQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKK 1638
            L+PLC+E+I YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+L+SCKYR I+KK
Sbjct: 198  LEPLCEEIIDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGKLVSCKYRDIDKK 256

Query: 1637 FWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELP 1458
            FWQEKDTEKI YG+DDIK  +DIIIVEGE+DKL+MEEAG+ NCVSVPDGAP +VS KELP
Sbjct: 257  FWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLAMEEAGFRNCVSVPDGAPPKVSSKELP 316

Query: 1457 AEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKND 1278
             E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             RCWRVKWPKKND
Sbjct: 317  PEEKDTKYQYLWNCKEYLKKASRIVLATDGDVPGQALAEELARRLGRERCWRVKWPKKND 376

Query: 1277 TDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVST 1098
             +  KDANEVLM+LG + L+ VIEDAEL+PI+GLF F++YFDE+DAYYHR+LG+E+GVST
Sbjct: 377  KENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYYHRTLGYEYGVST 436

Query: 1097 GWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHAR 918
            GW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVLCSMENKVREHAR
Sbjct: 437  GWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVLCSMENKVREHAR 496

Query: 917  KLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAK 738
            KLLEKHI+KPFF+ RYG S ERMS+EEFEQGKKWLNDTF+LIRCEDD LP+I WVL+LA+
Sbjct: 497  KLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDSLPNISWVLDLAQ 556

Query: 737  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQL 558
            AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH CHVWFVAHPRQL
Sbjct: 557  AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHCCHVWFVAHPRQL 616

Query: 557  QHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGD 378
              W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+RKVRNKV G IGD
Sbjct: 617  HQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEIDQVQVCVRKVRNKVAGTIGD 676

Query: 377  AFLSYNRTTGEFVDIDD 327
            AFLSY+R TG+F+D+++
Sbjct: 677  AFLSYDRATGQFMDVEN 693


>ref|XP_007023031.1| Toprim domain-containing protein isoform 1 [Theobroma cacao]
            gi|508778397|gb|EOY25653.1| Toprim domain-containing
            protein isoform 1 [Theobroma cacao]
          Length = 705

 Score =  935 bits (2417), Expect = 0.0
 Identities = 445/642 (69%), Positives = 523/642 (81%), Gaps = 1/642 (0%)
 Frame = -1

Query: 2234 KPTSKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSC 2055
            KP SK   +SL+ +GF S      S  V+ +  E    +M  L +LK KL++ GI   +C
Sbjct: 65   KPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGIDISAC 124

Query: 2054 KPGQYSRMLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYS 1878
             PG+ +R+LCP C GGES E S S+FI +DG  A W CFRAKCGW+G  +A   GK  Y+
Sbjct: 125  VPGRENRLLCPSCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYA 184

Query: 1877 SLEKSSKGKPHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIA 1698
            +L + +K K  R IT ESL+L+PLC++LIAYFAERMIS ETL+RNAVMQ+   G++I IA
Sbjct: 185  NLSRVNKVKVKREITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKS-GEEIAIA 243

Query: 1697 FTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGY 1518
            F Y R G L++CKYR I K+FWQEKDTEKI YG+DDI+ ASDIIIVEGE+DKL+MEEAG+
Sbjct: 244  FPYWRKGSLVNCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGF 303

Query: 1517 FNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXX 1338
             NCVSVPDGAP  VS KE+PAE +DTKYQYLWNCKEY++KASRIILATD D PGQ     
Sbjct: 304  RNCVSVPDGAPPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEE 363

Query: 1337 XXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDY 1158
                    RCWRVKWPKKN+ D  KDANEVLM+LGP  L++VIE+AELYPI+GLF F D+
Sbjct: 364  LARRLGRERCWRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDF 423

Query: 1157 FDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINR 978
            FDE+D YYHR+LG+EFGV TGW AL+ LYNVVPGELT+VTGVPNSGKSEWIDALLCN+N 
Sbjct: 424  FDEIDRYYHRTLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNE 483

Query: 977  SVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFH 798
            SVGWKF LCSMENKVR+HARKLLEK IRKPFF+  YG SVERMS+EE E+GKKWL+DTF+
Sbjct: 484  SVGWKFALCSMENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWLSDTFY 543

Query: 797  LIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKI 618
            L+RCE+D LPSIKWVL+LAKAAVLRHGVRGL+IDPYNELDHQRP +QTETEYVSQMLTKI
Sbjct: 544  LVRCENDSLPSIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQMLTKI 603

Query: 617  KRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPL 438
            KRFAQHH+CHVWFVAHPRQL HW+G PPNLYDISGSAHFINKCDNGIV+HRNRD  AGP+
Sbjct: 604  KRFAQHHSCHVWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPV 663

Query: 437  DRVQICIRKVRNKVIGNIGDAFLSYNRTTGEFVDIDDAASRK 312
            D+VQ+C+RKVRNKV+G IGDAFLSY+R TG + DID+   ++
Sbjct: 664  DQVQVCVRKVRNKVVGTIGDAFLSYDRVTGVYTDIDEPQKKQ 705


>emb|CDP12599.1| unnamed protein product [Coffea canephora]
          Length = 699

 Score =  935 bits (2416), Expect = 0.0
 Identities = 459/691 (66%), Positives = 546/691 (79%), Gaps = 11/691 (1%)
 Frame = -1

Query: 2369 YRLFSHNVLMGSKHM--LKCSPGTIHLSSIHSRHFHTHLH-------LFSTNPEKPTSKI 2217
            + + ++ ++ GSKH+  LK S     L+   + +F++  +       LFST   KP S I
Sbjct: 11   FNISNNFIMAGSKHLVFLKSSLFFPTLTPPKAANFYSQTYPFTAKKLLFSTILAKPRSPI 70

Query: 2216 PHISLKKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYS 2037
                  +  +   AP+   R V L+  E +  D  +L  L++KLEK G+   SC PGQY+
Sbjct: 71   -FCRKSRLSYTPLAPI--PRPVSLETGEEDVIDSAELRFLRVKLEKLGLNAESCMPGQYN 127

Query: 2036 RMLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKG-YSSLEKSS 1860
             ++CP C GG+S E+S S+FI ++G+ AMW+CFRAKCGW+G  RA   GK  Y +L   S
Sbjct: 128  GLICPMCKGGDSMEKSLSLFITQEGDAAMWNCFRAKCGWKGSTRAFADGKSTYGNLSMIS 187

Query: 1859 KGK-PHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRR 1683
              K PHR I+EESL L+PL +EL  YF+ERMISGETLRRN+VMQR Y  +Q VIAFTY R
Sbjct: 188  IVKQPHREISEESLGLEPLSNELHKYFSERMISGETLRRNSVMQRRYGENQSVIAFTYWR 247

Query: 1682 NGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVS 1503
             G L+SCKYR   K FWQE +TEKI YG+DDIK ASDIIIVEGEMDKLSMEEAG+ NCVS
Sbjct: 248  EGVLVSCKYRDSTKNFWQEINTEKIFYGLDDIKGASDIIIVEGEMDKLSMEEAGFKNCVS 307

Query: 1502 VPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXX 1323
            VPDGAP +VS K+LPAE +DTKYQYLWNCKEY++KASRIILATD D PGQ          
Sbjct: 308  VPDGAPPKVSDKDLPAEEKDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEELARRL 367

Query: 1322 XXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVD 1143
               RCWRV+WPKKND +  KDANEVLMFLGP  LREVIE+AELYPI+GLF F ++F ++D
Sbjct: 368  GRERCWRVRWPKKNDVEHFKDANEVLMFLGPGVLREVIENAELYPIRGLFDFKNFFVDID 427

Query: 1142 AYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWK 963
            AYYH++LG+E GVSTGW AL++LYNVVPGELT+VTGVPNSGKSEWIDALLCN+NR VGWK
Sbjct: 428  AYYHQTLGYELGVSTGWRALDQLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNRRVGWK 487

Query: 962  FVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCE 783
            F  CSMEN+VREHARKLLEKH+RKPFF+ RYG+S+ERMS EE E+GK WLN+TF+LIRCE
Sbjct: 488  FAFCSMENRVREHARKLLEKHVRKPFFDVRYGDSIERMSREELEEGKVWLNETFYLIRCE 547

Query: 782  DDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQ 603
            +DCLP+I WVL+LA+AAVLRHG+ GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQ
Sbjct: 548  NDCLPNINWVLDLARAAVLRHGINGLVIDPYNELDHQRPVSQTETEYVSQMLTKIKRFAQ 607

Query: 602  HHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQI 423
            HH+CHVWFVAHPRQL HWVGGPPNLYDISGSAHFINKCDNGIVVHRNRD   GP+D+VQ+
Sbjct: 608  HHSCHVWFVAHPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDPGVGPIDQVQV 667

Query: 422  CIRKVRNKVIGNIGDAFLSYNRTTGEFVDID 330
            C+RKVRNKVIG IG+A+LSYNR TGE++DID
Sbjct: 668  CVRKVRNKVIGTIGEAWLSYNRVTGEYMDID 698


>ref|XP_009353863.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Pyrus x bretschneideri]
          Length = 710

 Score =  932 bits (2409), Expect = 0.0
 Identities = 460/689 (66%), Positives = 543/689 (78%), Gaps = 15/689 (2%)
 Frame = -1

Query: 2348 VLMGSKHMLKCSPGTIHLS-SIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAP 2172
            +LM SK +L  +P    L+ S H   FH+   +FS    KP  KI  + L+ +G+ S +P
Sbjct: 22   LLMASKQLLNSAPFPNPLTPSAHRHPFHSRSLVFSPISSKPVLKIRPLCLRTNGYSSLSP 81

Query: 2171 V------------MHSRTVHLQ-PHEGEKTDMDKLAVLKMKLEKAGIACGSCK-PGQYSR 2034
                         + S+ V ++ P E   + M ++ +LK KLE  GI   +   PGQY+ 
Sbjct: 82   AHVAEPGKFRRKFVLSKEVEVEAPKENGMSSM-QMRILKEKLENLGIDGETISVPGQYNH 140

Query: 2033 MLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKGYSSLEKSSKG 1854
            ++CP C GG+S E+S S+ I E+ + A+W CFR KCGW G  RA V   G     ++SK 
Sbjct: 141  LICPMCKGGDSEEKSLSMDISENWDRAIWCCFRGKCGWTGSTRAFV---GNRLPPETSKL 197

Query: 1853 KPHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQ 1674
            K  R ITEESL L+PLC+E++ YF+ERMIS  TL RNAVMQ+S  GDQI IAF YRR+G+
Sbjct: 198  KKKREITEESLGLEPLCEEIVDYFSERMISRGTLMRNAVMQKS-TGDQIAIAFPYRRDGK 256

Query: 1673 LISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPD 1494
            L+SCKYR I+KKFWQEKDTEKI YG+DDIK  +DIIIVEGE+DKLSMEEAG+ NCVSVPD
Sbjct: 257  LVSCKYRDIDKKFWQEKDTEKIFYGLDDIKGTNDIIIVEGEIDKLSMEEAGFCNCVSVPD 316

Query: 1493 GAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXX 1314
            GAP +VS KELP E +DTKYQYLWNCKEY++KASRI+LATD D PGQ             
Sbjct: 317  GAPPKVSSKELPPEEKDTKYQYLWNCKEYLKKASRIVLATDGDGPGQALAEELARRLGRE 376

Query: 1313 RCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYY 1134
            RCWRVKWPKKND +  KDANEVLM+LG + L+ VIEDAEL+PI+GLF F++YFDE+DAYY
Sbjct: 377  RCWRVKWPKKNDKENFKDANEVLMYLGSDVLKGVIEDAELFPIRGLFNFANYFDELDAYY 436

Query: 1133 HRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVL 954
            HR+LG+E+GVSTGW  LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN++ SVGWKFVL
Sbjct: 437  HRTLGYEYGVSTGWKNLNDLYNVVPGELTIVTGVPNSGKSEWIDALLCNLSASVGWKFVL 496

Query: 953  CSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDC 774
            CSMENKVREHARKLLEKHI+KPFF+ RYG S ERMS+EEFEQGKKWLNDTF+LIRCEDD 
Sbjct: 497  CSMENKVREHARKLLEKHIKKPFFDKRYGGSAERMSVEEFEQGKKWLNDTFYLIRCEDDS 556

Query: 773  LPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHA 594
            LP+I WVL+LA+AAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHH 
Sbjct: 557  LPNISWVLDLAQAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHC 616

Query: 593  CHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIR 414
            CHVWFVAHPRQL  W GGPPNLYDISGSAHFINKCDNGIV+HRNRD  AG +D+VQ+C+R
Sbjct: 617  CHVWFVAHPRQLHQWTGGPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGEMDQVQVCVR 676

Query: 413  KVRNKVIGNIGDAFLSYNRTTGEFVDIDD 327
            KVRNKV G IGDAFLSY+R TG+F+D+++
Sbjct: 677  KVRNKVAGTIGDAFLSYDRATGQFMDVEN 705


>ref|XP_002268852.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Vitis vinifera] gi|297740887|emb|CBI31069.3| unnamed
            protein product [Vitis vinifera]
          Length = 705

 Score =  932 bits (2408), Expect = 0.0
 Identities = 457/680 (67%), Positives = 529/680 (77%), Gaps = 1/680 (0%)
 Frame = -1

Query: 2357 SHNVLMGSKHMLKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSF 2178
            S  +LM SKH+LK +P T+ L    S        + S  P KP S+I  ISLK       
Sbjct: 30   SRTILMASKHLLKPTPSTLPLKLNLSSP-----GIISAFPLKPNSRILPISLKTFALPYT 84

Query: 2177 APVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESR 1998
            +       V+ +  E       +L VLK KLE  G      K GQYS + CP C GG+S 
Sbjct: 85   SHSNVPGPVYSENPEDTSNSSARLNVLKKKLEVIGFDTQMLKTGQYSHLTCPTCKGGDSM 144

Query: 1997 ERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVH-GKGYSSLEKSSKGKPHRVITEESL 1821
            E+S S+FI  DG+ A+W C R KCG RG++RA V+    Y  L + +K KP R ITEESL
Sbjct: 145  EKSLSLFITLDGDHAVWMCHRGKCGSRGNIRAFVNDSSSYGRLNQITKIKPKREITEESL 204

Query: 1820 ELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINK 1641
             L+PLC EL+AYF ERMIS +TL RN+VMQ+SY GDQ +IAFTYRRNG L+SCKYR +NK
Sbjct: 205  GLKPLCSELVAYFGERMISEKTLARNSVMQKSY-GDQFIIAFTYRRNGVLVSCKYRDVNK 263

Query: 1640 KFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKEL 1461
             FWQEKDTEKI YGVDDIK+ASDIIIVEGE+DKLSMEEAG++NCVSVPDGAP  VS K  
Sbjct: 264  NFWQEKDTEKIFYGVDDIKEASDIIIVEGEIDKLSMEEAGFYNCVSVPDGAPPSVSTKVF 323

Query: 1460 PAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKN 1281
             +  +D KYQYLWNCKEY+EKASRIILATD DAPG              RCWRVKWPKKN
Sbjct: 324  ESAEKDIKYQYLWNCKEYLEKASRIILATDGDAPGLALAEELARRLGRERCWRVKWPKKN 383

Query: 1280 DTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVS 1101
            + +  KDANEVLM+LGP+ L+EVIE+AE+YPI+GLF FS YF+E+D YYH +LGFE GVS
Sbjct: 384  EVEHFKDANEVLMYLGPDVLKEVIENAEIYPIQGLFNFSHYFNEIDGYYHHTLGFELGVS 443

Query: 1100 TGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHA 921
            TGW  LN LYNVVPGELT+VTGVPNSGKSEWIDALLCNINRSVGW F LCSMENKVREHA
Sbjct: 444  TGWRGLNGLYNVVPGELTVVTGVPNSGKSEWIDALLCNINRSVGWSFALCSMENKVREHA 503

Query: 920  RKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELA 741
            RKLLEKHI+KPFF A YGES+ERM++EEFE GKKWL++TF+LIRCE D LP+IKWVL+LA
Sbjct: 504  RKLLEKHIKKPFFKAGYGESIERMTVEEFELGKKWLSETFYLIRCEKDSLPNIKWVLDLA 563

Query: 740  KAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQ 561
            K+AVLRHGVRGLVIDPYNELDHQRPP QTETEYVSQMLT IKRFAQHH+CHVWFVAHPRQ
Sbjct: 564  KSAVLRHGVRGLVIDPYNELDHQRPPGQTETEYVSQMLTMIKRFAQHHSCHVWFVAHPRQ 623

Query: 560  LQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIG 381
            L  W GGPPN+YDISGSAHFINKCDNGIV+HRNR+  AGP+D+VQ+C+RKVRNKV+G IG
Sbjct: 624  LHQWNGGPPNMYDISGSAHFINKCDNGIVIHRNRNPEAGPVDQVQVCVRKVRNKVVGTIG 683

Query: 380  DAFLSYNRTTGEFVDIDDAA 321
            DAFLSY+R +G + DID+ +
Sbjct: 684  DAFLSYDRISGVYTDIDETS 703


>ref|XP_004231556.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X1 [Solanum lycopersicum]
          Length = 697

 Score =  929 bits (2400), Expect = 0.0
 Identities = 460/682 (67%), Positives = 533/682 (78%), Gaps = 5/682 (0%)
 Frame = -1

Query: 2357 SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPTSKIPHISLKKHGF 2187
            S+N +MGSK+ L     +I L +I+      F T   +FS    KP S     S   +  
Sbjct: 14   SNNFVMGSKYFLH--KPSITLPTIYKSIPVLFKTQRLIFSAFASKPISPNRGTSSFSYRP 71

Query: 2186 CSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGG 2007
                P +    V L+  + + T+ D    LK KL + GI  GSC PGQY+ +LCP C GG
Sbjct: 72   QRIPPPVSVSGVMLEDPKEDITESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGG 131

Query: 2006 ESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYSSLEKSSK-GKPHRVIT 1833
             S E+S S+FI  DG  A W+CFRAKCGWRG  RA    +  ++ +++  K  K +R IT
Sbjct: 132  GSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFADVRTAFADMKRIGKVNKKYRQIT 191

Query: 1832 EESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYR 1653
            EESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFTYRR+G L+SCKYR
Sbjct: 192  EESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFTYRRDGALVSCKYR 250

Query: 1652 GINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVS 1473
             + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP  +S
Sbjct: 251  NMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSIS 310

Query: 1472 KKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 1293
             K+LP   +DTKYQYLWNCKEY+EK SRIILATD D PGQ             RCWRV W
Sbjct: 311  DKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPPGQALAEELARRLGRERCWRVTW 370

Query: 1292 PKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFE 1113
            PKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F++YF E+DAYYH+++G+E
Sbjct: 371  PKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFNFNNYFTEIDAYYHQTIGYE 430

Query: 1112 FGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKV 933
             GV TGW +LN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWKF LCSMEN+V
Sbjct: 431  LGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNYSVGWKFALCSMENRV 490

Query: 932  REHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWV 753
            REHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LIRCE+DCLP+I WV
Sbjct: 491  REHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLIRCENDCLPNIDWV 550

Query: 752  LELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVA 573
            L LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHVWFVA
Sbjct: 551  LSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCHVWFVA 610

Query: 572  HPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVI 393
            HPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKVRNKV 
Sbjct: 611  HPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVS 670

Query: 392  GNIGDAFLSYNRTTGEFVDIDD 327
            G IGDAFLSY+R TGEF+DID+
Sbjct: 671  GTIGDAFLSYDRVTGEFMDIDE 692


>ref|XP_006360317.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial-like
            [Solanum tuberosum]
          Length = 695

 Score =  927 bits (2397), Expect = 0.0
 Identities = 461/682 (67%), Positives = 533/682 (78%), Gaps = 5/682 (0%)
 Frame = -1

Query: 2357 SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPTSKIPHISLKKHGF 2187
            S+N +MGSK+ L     +I L +I+      F T   +FS    KP S     S   +  
Sbjct: 14   SNNFVMGSKYFLH--KPSITLPTIYKSIPVLFQTQRLIFSAFASKPISPNRGTSSFSYRP 71

Query: 2186 CSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGG 2007
                P +    V L+  + E  + D    LK KL + GI  GSC PGQY+ +LCP C GG
Sbjct: 72   QRIPPPVSG--VMLEDPKEEIAESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGG 129

Query: 2006 ESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYSSLEKSSK-GKPHRVIT 1833
             S E+S S+FI  DG  A W+CFRAKCGWRG  RA    +  ++ +++  K  K +R IT
Sbjct: 130  GSNEKSLSLFITPDGHAATWTCFRAKCGWRGGTRAFADVRTAFADMKRIGKVKKKYRQIT 189

Query: 1832 EESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYR 1653
            EESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFTYRR+G L+SCKYR
Sbjct: 190  EESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFTYRRDGALVSCKYR 248

Query: 1652 GINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVS 1473
             + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP  +S
Sbjct: 249  NMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSIS 308

Query: 1472 KKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 1293
             K+LP   +DTKYQYLWNCKEY+EKASRIILATD D PGQ             RCWRV W
Sbjct: 309  DKDLPPVDKDTKYQYLWNCKEYLEKASRIILATDGDPPGQALAEELARRLGRERCWRVTW 368

Query: 1292 PKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFE 1113
            PKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F +YF E+DAYYH+++G+E
Sbjct: 369  PKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFDFKNYFTEIDAYYHQTIGYE 428

Query: 1112 FGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKV 933
             GV TGW +LN+LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWKF LCSMEN+V
Sbjct: 429  LGVPTGWRSLNQLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNHSVGWKFALCSMENRV 488

Query: 932  REHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWV 753
            REHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LIRCE+DCLP+I WV
Sbjct: 489  REHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLIRCENDCLPNIDWV 548

Query: 752  LELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVA 573
            L LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHVWFVA
Sbjct: 549  LSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCHVWFVA 608

Query: 572  HPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVI 393
            HPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKVRNKV 
Sbjct: 609  HPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVS 668

Query: 392  GNIGDAFLSYNRTTGEFVDIDD 327
            G IGDAFLSY+R TGEF+DID+
Sbjct: 669  GTIGDAFLSYDRVTGEFMDIDE 690


>ref|XP_010315626.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            isoform X2 [Solanum lycopersicum]
          Length = 695

 Score =  926 bits (2392), Expect = 0.0
 Identities = 460/682 (67%), Positives = 533/682 (78%), Gaps = 5/682 (0%)
 Frame = -1

Query: 2357 SHNVLMGSKHMLKCSPGTIHLSSIHSRH---FHTHLHLFSTNPEKPTSKIPHISLKKHGF 2187
            S+N +MGSK+ L     +I L +I+      F T   +FS    KP S     S   +  
Sbjct: 14   SNNFVMGSKYFLH--KPSITLPTIYKSIPVLFKTQRLIFSAFASKPISPNRGTSSFSYRP 71

Query: 2186 CSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGG 2007
                P +    V L+  + + T+ D    LK KL + GI  GSC PGQY+ +LCP C GG
Sbjct: 72   QRIPPPVSG--VMLEDPKEDITESDHEKALKQKLSQVGIDIGSCGPGQYNGLLCPMCKGG 129

Query: 2006 ESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYSSLEKSSK-GKPHRVIT 1833
             S E+S S+FI  DG  A W+CFRAKCGWRG  RA    +  ++ +++  K  K +R IT
Sbjct: 130  GSNEKSLSLFITPDGYAATWTCFRAKCGWRGGTRAFADVRTAFADMKRIGKVNKKYRQIT 189

Query: 1832 EESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYR 1653
            EESL L+PLCD L+ YF+ERMIS ETLRRNAVMQ+ + GDQ+VIAFTYRR+G L+SCKYR
Sbjct: 190  EESLGLEPLCDVLLTYFSERMISRETLRRNAVMQQRH-GDQVVIAFTYRRDGALVSCKYR 248

Query: 1652 GINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVS 1473
             + KKFWQE DT KI YG+DDIK ASDIIIVEGEMDKL+MEEAG+ NCVSVPDGAP  +S
Sbjct: 249  NMTKKFWQEADTLKIFYGLDDIKGASDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSIS 308

Query: 1472 KKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKW 1293
             K+LP   +DTKYQYLWNCKEY+EK SRIILATD D PGQ             RCWRV W
Sbjct: 309  DKDLPPVEKDTKYQYLWNCKEYLEKTSRIILATDGDPPGQALAEELARRLGRERCWRVTW 368

Query: 1292 PKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFE 1113
            PKK+  D  KDANEVLM LGP ALREVIE AELYPI+GLF F++YF E+DAYYH+++G+E
Sbjct: 369  PKKSTIDHFKDANEVLMCLGPGALREVIEGAELYPIQGLFNFNNYFTEIDAYYHQTIGYE 428

Query: 1112 FGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKV 933
             GV TGW +LN LYNVVPGELTIVTGVPNSGKSEWIDALLCN+N SVGWKF LCSMEN+V
Sbjct: 429  LGVPTGWRSLNHLYNVVPGELTIVTGVPNSGKSEWIDALLCNLNYSVGWKFALCSMENRV 488

Query: 932  REHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWV 753
            REHARKLLEKHI+KPFF+ RYGESVERMS +EFE+GK+WL+DTF LIRCE+DCLP+I WV
Sbjct: 489  REHARKLLEKHIKKPFFDVRYGESVERMSAQEFEEGKQWLSDTFFLIRCENDCLPNIDWV 548

Query: 752  LELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVA 573
            L LAKAAVLRHGV GLVIDPYNELDHQRP +QTETEYVSQMLTKIKRFAQHH+CHVWFVA
Sbjct: 549  LSLAKAAVLRHGVNGLVIDPYNELDHQRPSSQTETEYVSQMLTKIKRFAQHHSCHVWFVA 608

Query: 572  HPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVI 393
            HPRQL HWVGGPPNLYDISGSAHFINKCDNGIV+HRNRD +AGP+D+VQ+C+RKVRNKV 
Sbjct: 609  HPRQLHHWVGGPPNLYDISGSAHFINKCDNGIVIHRNRDPSAGPVDQVQVCVRKVRNKVS 668

Query: 392  GNIGDAFLSYNRTTGEFVDIDD 327
            G IGDAFLSY+R TGEF+DID+
Sbjct: 669  GTIGDAFLSYDRVTGEFMDIDE 690


>ref|XP_010053033.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Eucalyptus grandis] gi|629112311|gb|KCW77271.1|
            hypothetical protein EUGRSUZ_D01628 [Eucalyptus grandis]
          Length = 720

 Score =  924 bits (2388), Expect = 0.0
 Identities = 451/672 (67%), Positives = 531/672 (79%), Gaps = 1/672 (0%)
 Frame = -1

Query: 2324 LKCSPGTIHLSSIHSRHFHTHLHLFSTNPEKPTSKIPHISLKKHGFCSFAPVMHSRTVHL 2145
            L  S  +  LS +  R  +  LH FS    +  S++    LK +G          R V L
Sbjct: 53   LSSSSSSSSLSRVRFRGAYG-LH-FSCARSRAGSRMNPSCLKANGVPHRPHSSIPRPVQL 110

Query: 2144 QPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCPQCGGGESRERSFSIFIRED 1965
            +   G   +   L VLKM+LE+ GI   +C PGQY  +LCP C GG S ERS SIF+  D
Sbjct: 111  EGPVGRGIETP-LKVLKMRLEELGIDMQTCLPGQYHSLLCPMCKGGRSMERSLSIFVSPD 169

Query: 1964 GELAMWSCFRAKCGWRGHMRASVHGKG-YSSLEKSSKGKPHRVITEESLELQPLCDELIA 1788
            G  A+W+CFR  CGW+G  RA+   +  Y++  ++SK K  R I+EESL L+PLC+EL+A
Sbjct: 170  GGSAVWTCFRGSCGWKGSTRAAAKPRSSYATSNQTSKVKTIREISEESLGLEPLCNELVA 229

Query: 1787 YFAERMISGETLRRNAVMQRSYLGDQIVIAFTYRRNGQLISCKYRGINKKFWQEKDTEKI 1608
            YFAER+IS ETLRRNAVMQ+    +QIVIAFTYRR G+L+SCKYR + KKFWQE  TEKI
Sbjct: 230  YFAERLISAETLRRNAVMQKK-CENQIVIAFTYRREGKLVSCKYRDVKKKFWQEAHTEKI 288

Query: 1607 LYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDGAPSQVSKKELPAEGEDTKYQY 1428
             YG+DDIK  S+IIIVEGEMDKL+MEEAG+ NCVSVPDGAP   S K+LP EG+D KYQY
Sbjct: 289  FYGLDDIKGKSEIIIVEGEMDKLAMEEAGFRNCVSVPDGAPPSTSDKDLPPEGQDIKYQY 348

Query: 1427 LWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXRCWRVKWPKKNDTDVCKDANEV 1248
            LWNCK+Y+++ASRIILATD D PGQ             RCWRVKWPKKND++  KDANEV
Sbjct: 349  LWNCKDYLKEASRIILATDGDKPGQALAEELARRLGRERCWRVKWPKKNDSEYFKDANEV 408

Query: 1247 LMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYHRSLGFEFGVSTGWMALNELYN 1068
            LM++GP  LREVI+DAELYPI+GLF F D+FDE++ YYHR+LG+EFGVSTGW +LN LYN
Sbjct: 409  LMYVGPGVLREVIDDAELYPIRGLFTFKDFFDEINGYYHRTLGYEFGVSTGWKSLNHLYN 468

Query: 1067 VVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLCSMENKVREHARKLLEKHIRKP 888
            VVPGELTIVTGVPNSGKSEWIDALLCNIN SVGWKF LCSMEN+VREHARKLLEKHI+KP
Sbjct: 469  VVPGELTIVTGVPNSGKSEWIDALLCNINESVGWKFALCSMENRVREHARKLLEKHIKKP 528

Query: 887  FFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCLPSIKWVLELAKAAVLRHGVRG 708
            FF+++YGE  ERMS+E+FE+GK+WL+DTF+LIRCEDD LPSIKWVL+LAK+AVLRHGVRG
Sbjct: 529  FFDSKYGEPAERMSVEDFERGKRWLSDTFYLIRCEDDSLPSIKWVLDLAKSAVLRHGVRG 588

Query: 707  LVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHACHVWFVAHPRQLQHWVGGPPNL 528
            LVIDPYNELDHQRP  QTETEYVSQMLT I+RFAQHH+CHVWFVAHPRQL +WVG PPNL
Sbjct: 589  LVIDPYNELDHQRPSGQTETEYVSQMLTLIRRFAQHHSCHVWFVAHPRQLHNWVGEPPNL 648

Query: 527  YDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRKVRNKVIGNIGDAFLSYNRTTG 348
            YDISGSAHFINKCDNGIV+HRNRD  AGP+D+VQ+C+RKVRNKV G IGDAFL+YNR TG
Sbjct: 649  YDISGSAHFINKCDNGIVIHRNRDPEAGPVDQVQVCVRKVRNKVAGTIGDAFLNYNRVTG 708

Query: 347  EFVDIDDAASRK 312
            EF+D+D A  +K
Sbjct: 709  EFIDLDAAPKKK 720


>ref|XP_007023033.1| Toprim domain-containing protein isoform 3 [Theobroma cacao]
            gi|508778399|gb|EOY25655.1| Toprim domain-containing
            protein isoform 3 [Theobroma cacao]
          Length = 712

 Score =  924 bits (2387), Expect = 0.0
 Identities = 440/628 (70%), Positives = 515/628 (82%), Gaps = 1/628 (0%)
 Frame = -1

Query: 2234 KPTSKIPHISLKKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSC 2055
            KP SK   +SL+ +GF S      S  V+ +  E    +M  L +LK KL++ GI   +C
Sbjct: 65   KPYSKNHSLSLRTNGFSSIPSANVSAPVYSKELEDRPLNMRSLEILKHKLKQLGIDISAC 124

Query: 2054 KPGQYSRMLCPQCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGK-GYS 1878
             PG+ +R+LCP C GGES E S S+FI +DG  A W CFRAKCGW+G  +A   GK  Y+
Sbjct: 125  VPGRENRLLCPSCNGGESEEISLSLFINQDGSSASWMCFRAKCGWKGITKAFADGKPSYA 184

Query: 1877 SLEKSSKGKPHRVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGDQIVIA 1698
            +L + +K K  R IT ESL+L+PLC++LIAYFAERMIS ETL+RNAVMQ+   G++I IA
Sbjct: 185  NLSRVNKVKVKREITVESLQLEPLCNQLIAYFAERMISAETLKRNAVMQKKS-GEEIAIA 243

Query: 1697 FTYRRNGQLISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGY 1518
            F Y R G L++CKYR I K+FWQEKDTEKI YG+DDI+ ASDIIIVEGE+DKL+MEEAG+
Sbjct: 244  FPYWRKGSLVNCKYRDIAKRFWQEKDTEKIFYGLDDIEDASDIIIVEGEIDKLAMEEAGF 303

Query: 1517 FNCVSVPDGAPSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXX 1338
             NCVSVPDGAP  VS KE+PAE +DTKYQYLWNCKEY++KASRIILATD D PGQ     
Sbjct: 304  RNCVSVPDGAPPSVSSKEVPAEEQDTKYQYLWNCKEYLKKASRIILATDGDPPGQALAEE 363

Query: 1337 XXXXXXXXRCWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDY 1158
                    RCWRVKWPKKN+ D  KDANEVLM+LGP  L++VIE+AELYPI+GLF F D+
Sbjct: 364  LARRLGRERCWRVKWPKKNEVDHFKDANEVLMYLGPSVLKDVIENAELYPIRGLFNFRDF 423

Query: 1157 FDEVDAYYHRSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINR 978
            FDE+D YYHR+LG+EFGV TGW AL+ LYNVVPGELT+VTGVPNSGKSEWIDALLCN+N 
Sbjct: 424  FDEIDRYYHRTLGYEFGVPTGWRALDGLYNVVPGELTVVTGVPNSGKSEWIDALLCNLNE 483

Query: 977  SVGWKFVLCSMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFH 798
            SVGWKF LCSMENKVR+HARKLLEK IRKPFF+  YG SVERMS+EE E+GKKWL+DTF+
Sbjct: 484  SVGWKFALCSMENKVRDHARKLLEKCIRKPFFDTSYGSSVERMSVEELEKGKKWLSDTFY 543

Query: 797  LIRCEDDCLPSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKI 618
            L+RCE+D LPSIKWVL+LAKAAVLRHGVRGL+IDPYNELDHQRP +QTETEYVSQMLTKI
Sbjct: 544  LVRCENDSLPSIKWVLDLAKAAVLRHGVRGLLIDPYNELDHQRPVSQTETEYVSQMLTKI 603

Query: 617  KRFAQHHACHVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPL 438
            KRFAQHH+CHVWFVAHPRQL HW+G PPNLYDISGSAHFINKCDNGIV+HRNRD  AGP+
Sbjct: 604  KRFAQHHSCHVWFVAHPRQLHHWIGAPPNLYDISGSAHFINKCDNGIVIHRNRDPEAGPV 663

Query: 437  DRVQICIRKVRNKVIGNIGDAFLSYNRT 354
            D+VQ+C+RKVRNKV+G IGDAFLSY+R+
Sbjct: 664  DQVQVCVRKVRNKVVGTIGDAFLSYDRS 691


>ref|XP_011039292.1| PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial
            [Populus euphratica]
          Length = 715

 Score =  923 bits (2385), Expect = 0.0
 Identities = 458/687 (66%), Positives = 531/687 (77%), Gaps = 9/687 (1%)
 Frame = -1

Query: 2363 LFSHNVLMGSKHMLKCSPGTIH-----LSSIHSRHFHTHLHLFSTN-PEKPTSKIPHISL 2202
            L S +  MGSK +LK +  T       L S + + + T   L       KPTSK     L
Sbjct: 20   LSSFHYYMGSKFLLKPTTSTFPTPLPLLPSSNKQQYRTFKRLSPVFCSSKPTSKFSRSLL 79

Query: 2201 KKHGFCSFAPVMHSRTVHLQPHEGEKTDMDKLAVLKMKLEKAGIACGSCKPGQYSRMLCP 2022
             +     F+P+  S  V+    E +K+   KL +L+ KL + GI      PGQY+ + CP
Sbjct: 80   TQTNGLPFSPL--SAPVYGLDPEVKKS---KLEILRFKLAEVGIELDHFAPGQYNALTCP 134

Query: 2021 QCGGGESRERSFSIFIREDGELAMWSCFRAKCGWRGHMRASVHGKG-YSSLEKSSKGKPH 1845
             C GG S+E+SFS+FI  DG  A W+CFRAKCGW G  +     K  Y +  K SK K  
Sbjct: 135  MCKGGGSKEKSFSLFISADGGNASWNCFRAKCGWNGGTKPFAGSKSTYGTSLKLSKVKEI 194

Query: 1844 RVITEESLELQPLCDELIAYFAERMISGETLRRNAVMQRSYLGD--QIVIAFTYRRNGQL 1671
            R ITE+SLEL+PLCDEL+ YF ER+IS ETL RN VMQ+ Y GD  Q+ IAFTYRRNG L
Sbjct: 195  REITEQSLELEPLCDELVCYFKERLISAETLARNQVMQKGY-GDRGQVAIAFTYRRNGVL 253

Query: 1670 ISCKYRGINKKFWQEKDTEKILYGVDDIKQASDIIIVEGEMDKLSMEEAGYFNCVSVPDG 1491
            +SCKYR INK+FWQEKDTEK+ YG+DDIK A +IIIVEGEMDKL+MEEAG+ NCVSVPDG
Sbjct: 254  VSCKYRDINKRFWQEKDTEKVFYGLDDIKGADEIIIVEGEMDKLAMEEAGFRNCVSVPDG 313

Query: 1490 APSQVSKKELPAEGEDTKYQYLWNCKEYVEKASRIILATDADAPGQXXXXXXXXXXXXXR 1311
            AP  VS KELP   EDTKYQYLWNCKEY++K SRIILATD D PGQ             R
Sbjct: 314  APPSVSPKELPPNQEDTKYQYLWNCKEYLDKVSRIILATDGDPPGQALAEELARRLGRER 373

Query: 1310 CWRVKWPKKNDTDVCKDANEVLMFLGPEALREVIEDAELYPIKGLFRFSDYFDEVDAYYH 1131
            CWRVKWPKKN  +  KDANEVLMF GP ALR++IE+AELYPI+GLF FSDYF E+DAYY+
Sbjct: 374  CWRVKWPKKNTDEHFKDANEVLMFSGPLALRDIIENAELYPIRGLFHFSDYFPEIDAYYN 433

Query: 1130 RSLGFEFGVSTGWMALNELYNVVPGELTIVTGVPNSGKSEWIDALLCNINRSVGWKFVLC 951
            R+LG+EFG STGW ALNE+YNV+PGELT+VTGVPNSGKSEWIDALLCN+N SVGWKF LC
Sbjct: 434  RTLGYEFGASTGWTALNEIYNVMPGELTLVTGVPNSGKSEWIDALLCNLNESVGWKFALC 493

Query: 950  SMENKVREHARKLLEKHIRKPFFNARYGESVERMSIEEFEQGKKWLNDTFHLIRCEDDCL 771
            SMEN VR+HARKLLEKH++KPFF+ARYGES ERMS EE E+GK+WL+DTF+LIRCEDD L
Sbjct: 494  SMENNVRQHARKLLEKHMKKPFFDARYGESAERMSAEELEEGKQWLSDTFYLIRCEDDAL 553

Query: 770  PSIKWVLELAKAAVLRHGVRGLVIDPYNELDHQRPPNQTETEYVSQMLTKIKRFAQHHAC 591
            P+IKWVL+LA+AAVLRHGVRGLVIDPYNELDHQRPPN TETEYVSQMLT IKRFAQHHAC
Sbjct: 554  PNIKWVLDLARAAVLRHGVRGLVIDPYNELDHQRPPNMTETEYVSQMLTLIKRFAQHHAC 613

Query: 590  HVWFVAHPRQLQHWVGGPPNLYDISGSAHFINKCDNGIVVHRNRDENAGPLDRVQICIRK 411
            HVW VAHPRQLQ+W G PPNLYDISGSAHF+NKCDNGIV+HRNR+ NAGP+D+VQ+ +RK
Sbjct: 614  HVWLVAHPRQLQNWTGQPPNLYDISGSAHFVNKCDNGIVIHRNRNPNAGPIDQVQVLVRK 673

Query: 410  VRNKVIGNIGDAFLSYNRTTGEFVDID 330
            VRNKV G IGDAFLSYNR TGEF+++D
Sbjct: 674  VRNKVAGTIGDAFLSYNRVTGEFMNVD 700