BLASTX nr result

ID: Cinnamomum23_contig00014030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00014030
         (807 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010550556.1| PREDICTED: cleavage and polyadenylation spec...   108   5e-21
ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation spec...   106   2e-20
ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation spec...   105   3e-20
ref|XP_009605983.1| PREDICTED: cleavage and polyadenylation spec...   105   3e-20
ref|XP_012088265.1| PREDICTED: cleavage and polyadenylation spec...   104   8e-20
gb|KHN41472.1| Cleavage and polyadenylation specificity factor s...   104   8e-20
ref|XP_012088264.1| PREDICTED: cleavage and polyadenylation spec...   104   8e-20
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...   104   8e-20
ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation spec...   104   8e-20
ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation spec...   104   8e-20
gb|KEH41412.1| cleavage and polyadenylation specificity factor s...   103   1e-19
ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec...   103   1e-19
ref|XP_003590295.1| Cleavage and polyadenylation specificity fac...   103   1e-19
emb|CDP05186.1| unnamed protein product [Coffea canephora]            103   2e-19
ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation spec...   102   2e-19
ref|XP_012858424.1| PREDICTED: cleavage and polyadenylation spec...   102   3e-19
ref|XP_010035149.1| PREDICTED: cleavage and polyadenylation spec...   102   3e-19
ref|XP_010035148.1| PREDICTED: cleavage and polyadenylation spec...   102   3e-19
gb|EYU19553.1| hypothetical protein MIMGU_mgv1a0019021mg, partia...   102   3e-19
ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation spec...   102   3e-19

>ref|XP_010550556.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X1 [Tarenaya hassleriana]
           gi|729382079|ref|XP_010550557.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 2 isoform X2
           [Tarenaya hassleriana]
          Length = 762

 Score =  108 bits (269), Expect = 5e-21
 Identities = 53/75 (70%), Positives = 59/75 (78%)
 Frame = -1

Query: 564 CLRVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKT 385
           C RV+S IDAVLLSHSDTLH+GALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK 
Sbjct: 70  CFRVASTIDAVLLSHSDTLHIGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQ 129

Query: 384 APAFQQSTVDRFSPA 340
              F   T+D    A
Sbjct: 130 VSEFDLFTLDDIDSA 144


>ref|XP_009401035.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Musa acuminata subsp. malaccensis]
          Length = 735

 Score =  106 bits (265), Expect = 2e-20
 Identities = 51/73 (69%), Positives = 59/73 (80%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RVS+K+DAVLLSH D LHLGALPYAMKHLGL +PVYSTEPVYRLGLL++YDHY+SR+   
Sbjct: 50  RVSTKVDAVLLSHPDVLHLGALPYAMKHLGLTSPVYSTEPVYRLGLLTMYDHYLSRRQIS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 DFDLFTLDDIDTA 122


>ref|XP_010255376.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Nelumbo nucifera]
          Length = 739

 Score =  105 bits (262), Expect = 3e-20
 Identities = 52/73 (71%), Positives = 57/73 (78%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           R+SS IDAVLLSH D LHLGALPYAMKHL L APVYSTEPVYRLGLL++YDHY+SRK   
Sbjct: 50  RISSTIDAVLLSHPDILHLGALPYAMKHLALSAPVYSTEPVYRLGLLTMYDHYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 DFDLFTLDDIDSA 122


>ref|XP_009605983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X1 [Nicotiana tomentosiformis]
          Length = 739

 Score =  105 bits (262), Expect = 3e-20
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S +DAVLLSHSDT HLGALPYAMK LGL AP+Y+TEPVYRLGLL++YDHY+SRK   
Sbjct: 50  RVASSVDAVLLSHSDTFHLGALPYAMKQLGLSAPIYATEPVYRLGLLTMYDHYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_012088265.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X2 [Jatropha curcas]
          Length = 740

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSHSDTLHLGALPYAMK LGL APVYSTEPV+RLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHSDTLHLGALPYAMKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKAVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>gb|KHN41472.1| Cleavage and polyadenylation specificity factor subunit 2 [Glycine
           soja]
          Length = 775

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH+DTLHLGALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_012088264.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X1 [Jatropha curcas]
           gi|643709706|gb|KDP24115.1| hypothetical protein
           JCGZ_25772 [Jatropha curcas]
          Length = 741

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSHSDTLHLGALPYAMK LGL APVYSTEPV+RLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHSDTLHLGALPYAMKQLGLSAPVYSTEPVFRLGLLTMYDQYLSRKAVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223542884|gb|EEF44420.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 740

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSHSDTLHLGALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHSDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKAVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   ++D    A
Sbjct: 110 EFDLFSLDDIDSA 122


>ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2-like isoform X2 [Glycine max]
          Length = 727

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH+DTLHLGALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK   
Sbjct: 38  RVASTIDAVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVS 97

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 98  EFDLFTLDDIDSA 110


>ref|XP_006587302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2-like isoform X1 [Glycine max]
          Length = 739

 Score =  104 bits (259), Expect = 8e-20
 Identities = 52/73 (71%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH+DTLHLGALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHADTLHLGALPYAMKRLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>gb|KEH41412.1| cleavage and polyadenylation specificity factor subunit 2 [Medicago
           truncatula]
          Length = 740

 Score =  103 bits (258), Expect = 1e-19
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH DTLHL ALPYA+KHLGL APVYSTEPVYRLGLL++YDH++SRK   
Sbjct: 50  RVASTIDAVLLSHPDTLHLAALPYAIKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 DFDLFTLDDIDSA 122


>ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2-like isoform 1 [Glycine max]
           gi|734340298|gb|KHN09330.1| Cleavage and polyadenylation
           specificity factor subunit 2 [Glycine soja]
          Length = 738

 Score =  103 bits (258), Expect = 1e-19
 Identities = 51/68 (75%), Positives = 57/68 (83%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH+DTLHLGALPYAMK LGL APVYSTEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHADTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVD 355
            F   T+D
Sbjct: 110 EFDLFTLD 117


>ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
           truncatula]
          Length = 630

 Score =  103 bits (258), Expect = 1e-19
 Identities = 51/73 (69%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH DTLHL ALPYA+KHLGL APVYSTEPVYRLGLL++YDH++SRK   
Sbjct: 50  RVASTIDAVLLSHPDTLHLAALPYAIKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 DFDLFTLDDIDSA 122


>emb|CDP05186.1| unnamed protein product [Coffea canephora]
          Length = 257

 Score =  103 bits (256), Expect = 2e-19
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+  +DAVLLSHSDTLHLGALPYAMK LGL APV++TEPVYRLGLL++YDHY+SRK   
Sbjct: 50  RVAPTVDAVLLSHSDTLHLGALPYAMKKLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_004499957.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Cicer arietinum]
          Length = 740

 Score =  102 bits (255), Expect = 2e-19
 Identities = 50/73 (68%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           +V+S IDAVLLSH DTLHLGALPYAMK LGL APV+STEPVYRLGLL++YDH++SRK   
Sbjct: 50  KVASSIDAVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDHFLSRKQIS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 DFDLFTLDHIDSA 122


>ref|XP_012858424.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Erythranthe guttatus]
          Length = 741

 Score =  102 bits (254), Expect = 3e-19
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S +DAVLLSH DTLHLG+LPYAMK LGL APV++TEPVYRLGLL++YDHY+SRK   
Sbjct: 50  RVASTVDAVLLSHPDTLHLGSLPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_010035149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X2 [Eucalyptus grandis]
           gi|629079999|gb|KCW46444.1| hypothetical protein
           EUGRSUZ_K00275 [Eucalyptus grandis]
          Length = 734

 Score =  102 bits (254), Expect = 3e-19
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH DTLHLGALPYAMK LGL APVY+TEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHPDTLHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_010035148.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 isoform X1 [Eucalyptus grandis]
           gi|629079998|gb|KCW46443.1| hypothetical protein
           EUGRSUZ_K00275 [Eucalyptus grandis]
          Length = 735

 Score =  102 bits (254), Expect = 3e-19
 Identities = 51/73 (69%), Positives = 57/73 (78%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S IDAVLLSH DTLHLGALPYAMK LGL APVY+TEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASTIDAVLLSHPDTLHLGALPYAMKQLGLSAPVYATEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>gb|EYU19553.1| hypothetical protein MIMGU_mgv1a0019021mg, partial [Erythranthe
           guttata]
          Length = 220

 Score =  102 bits (254), Expect = 3e-19
 Identities = 49/73 (67%), Positives = 58/73 (79%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S +DAVLLSH DTLHLG+LPYAMK LGL APV++TEPVYRLGLL++YDHY+SRK   
Sbjct: 50  RVASTVDAVLLSHPDTLHLGSLPYAMKQLGLSAPVFATEPVYRLGLLTMYDHYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


>ref|XP_004308076.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Fragaria vesca subsp. vesca]
          Length = 739

 Score =  102 bits (254), Expect = 3e-19
 Identities = 50/73 (68%), Positives = 57/73 (78%)
 Frame = -1

Query: 558 RVSSKIDAVLLSHSDTLHLGALPYAMKHLGLFAPVYSTEPVYRLGLLSIYDHYVSRKTAP 379
           RV+S +DAVLLSH DTLHLGALPYA KHLGL APV+STEPVYRLGLL++YD Y+SRK   
Sbjct: 50  RVASAVDAVLLSHPDTLHLGALPYAAKHLGLAAPVFSTEPVYRLGLLTMYDQYLSRKQVS 109

Query: 378 AFQQSTVDRFSPA 340
            F   T+D    A
Sbjct: 110 EFDLFTLDDIDSA 122


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