BLASTX nr result

ID: Cinnamomum23_contig00013308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00013308
         (425 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266748.1| PREDICTED: RINT1-like protein MAG2L [Nelumbo...    75   1e-11
ref|XP_010908521.1| PREDICTED: RINT1-like protein MAG2L isoform ...    72   1e-10
ref|XP_008779336.1| PREDICTED: RAD50-interacting protein 1 [Phoe...    62   2e-07

>ref|XP_010266748.1| PREDICTED: RINT1-like protein MAG2L [Nelumbo nucifera]
          Length = 822

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -1

Query: 293 DQHFKTQEDLSLIPSXXXXXXKDCGDSDWNLLSLKKNLSATIASWISRSNAVDSVLHQLS 114
           D++ KT+EDL   P+      K+C D D NL+ L+ N+S+ I SW +RS+   +V HQL+
Sbjct: 22  DENLKTREDLFRAPALAKELKKNCIDLDKNLIKLQTNISSLITSWTARSDGAKNVFHQLN 81

Query: 113 LKLDDFDPAPFRGTKENANLKRIRRILDEELPMIVKE 3
            KL +    P +      +LK IR+IL EELP++ KE
Sbjct: 82  HKLRNLFLYPSQDETGRVDLKNIRKILGEELPLLAKE 118


>ref|XP_010908521.1| PREDICTED: RINT1-like protein MAG2L isoform X1 [Elaeis guineensis]
          Length = 850

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
 Frame = -1

Query: 293 DQHFKTQEDLSLIPSXXXXXXKDCGDSDWNLLSLKKNLSATIASWISRSNAVDSVLHQLS 114
           D HFK  EDLS  PS      ++CGD + +LL L+K LS   ++W+SRS+ V   L  L 
Sbjct: 22  DDHFKALEDLSTAPSLVAQLNRECGDLETDLLCLRKGLSVATSTWLSRSDDVRRTLRLLD 81

Query: 113 LKLDDFDPAPFRGT-------------KENANLKRIRRILDEELPMIVKE 3
              + ++P P RG+             +  A L  + RIL  ELP++VKE
Sbjct: 82  PGFEGYNPRPSRGSGGLSPKSPAPPYGEVEAGLPSVGRILQVELPLLVKE 131


>ref|XP_008779336.1| PREDICTED: RAD50-interacting protein 1 [Phoenix dactylifera]
          Length = 850

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
 Frame = -1

Query: 293 DQHFKTQEDLSLIPSXXXXXXKDCGDSDWNLLSLKKNLSATIASWISRSNAVDSVLHQLS 114
           D HFK  EDLS  PS      ++CGD + +LL L+  LS   ++W+SRS+ V   L  L 
Sbjct: 22  DDHFKALEDLSTAPSLVARLNRECGDLETDLLRLRNRLSLAASTWLSRSDEVRRTLLLLD 81

Query: 113 LKLDDFDPAPFRGTKEN-------------ANLKRIRRILDEELPMIVKE 3
              +  +  P RG++ +             A L    RIL  ELP++ KE
Sbjct: 82  PGFEGSNAPPSRGSRGHNPNSPAPPYGEVEAGLPSAGRILQVELPLLAKE 131


Top