BLASTX nr result

ID: Cinnamomum23_contig00013267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00013267
         (469 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039003.1| RING/U-box superfamily protein, putative [Th...    58   2e-06

>ref|XP_007039003.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508776248|gb|EOY23504.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 374

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/136 (33%), Positives = 59/136 (43%)
 Frame = +2

Query: 32  TLFNCSKIVDFDYYFGSYIHIPCLSDSEHDAFVDSSEDMDSGYTVGKLRVSCQTTKTISV 211
           T FNCS     DY    +  I CLS   +  F  SS  +     V  L  SCQ   T++V
Sbjct: 126 TFFNCS----LDYLKYGFNPIACLSGGNYTVFATSSTKV-----VSSLSSSCQRVTTVAV 176

Query: 212 PRLYPFNLNWSSTTPPSSEDHMYLMSRWLSNYYSFDQDLHDLMWYVPGCIGCEQRGGMEC 391
           P      + W+S        H  ++   LSN          L W  P C  CE RGG EC
Sbjct: 177 P------VEWAS--------HDQILKSDLSNNLR-------LTWDKPKCRKCESRGG-EC 214

Query: 392 RYKDDNSNDTLCSPSP 439
           R K +++  T+CS +P
Sbjct: 215 RLKANSTRQTICSNAP 230


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