BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00012987
         (1645 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010253582.1| PREDICTED: RNA pseudouridine synthase 5 isof...   547   e-153
ref|XP_010253580.1| PREDICTED: RNA pseudouridine synthase 5 isof...   543   e-151
ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isof...   536   e-149
ref|XP_007009784.1| Pseudouridine synthase family protein [Theob...   530   e-147
ref|XP_010253584.1| PREDICTED: RNA pseudouridine synthase 5 isof...   520   e-144
ref|XP_011031774.1| PREDICTED: RNA pseudouridine synthase 5 isof...   520   e-144
ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isof...   517   e-143
ref|XP_004307403.1| PREDICTED: RNA pseudouridine synthase 5 [Fra...   516   e-143
ref|XP_011031773.1| PREDICTED: RNA pseudouridine synthase 5 isof...   515   e-143
ref|XP_012086507.1| PREDICTED: RNA pseudouridine synthase 5 [Jat...   514   e-143
ref|XP_008789068.1| PREDICTED: RNA pseudouridine synthase 5 [Pho...   514   e-143
ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phas...   513   e-142
gb|AES62203.2| pseudouridine synthase Rlu family protein [Medica...   513   e-142
ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cic...   513   e-142
ref|XP_009333717.1| PREDICTED: RNA pseudouridine synthase 5 isof...   512   e-142
ref|XP_008381972.1| PREDICTED: RNA pseudouridine synthase 5 isof...   512   e-142
ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Popu...   511   e-142
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              510   e-141
ref|XP_010099639.1| RNA pseudourine synthase 5 [Morus notabilis]...   509   e-141
ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isof...   509   e-141

>ref|XP_010253582.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nelumbo nucifera]
          Length = 398

 Score =  547 bits (1410), Expect = e-153
 Identities = 271/381 (71%), Positives = 308/381 (80%), Gaps = 6/381 (1%)
 Frame = -1

Query: 1594 EMQERGKAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQ 1415
            E  + G+ FGVPWP+LNDGLTY+D VRP ++ ST+I+FYS+K+ NSAP+QGWLQRI+NGQ
Sbjct: 11   ERAQTGETFGVPWPDLNDGLTYTDTVRPSNAASTMIEFYSTKYKNSAPLQGWLQRIRNGQ 70

Query: 1414 ITLDGQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPG 1235
            IT+DG+VV DP TILR GSEL+Y RLPWKEP APYLLE+L+EDDD+VA NKPSGLQVLPG
Sbjct: 71   ITVDGEVVKDPHTILRAGSELMYHRLPWKEPDAPYLLEILYEDDDLVAFNKPSGLQVLPG 130

Query: 1234 GLFQQRTVLTQLQWRP------EKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAK 1073
            GLFQQRTVLTQLQWR           S+   AQ+ HPVPVHRLGRGTSGILLCAKSK+AK
Sbjct: 131  GLFQQRTVLTQLQWRECQGISTSLGLSTNPGAQQQHPVPVHRLGRGTSGILLCAKSKLAK 190

Query: 1072 ARLAEYFADGTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPG 893
            +RLA YFA+GT+ V  NR  +M+ G  RRI KVYRALA+GIIDKDEV+IKQPIGIM Y G
Sbjct: 191  SRLAAYFAEGTSVVGDNRKSNMDLGGVRRISKVYRALASGIIDKDEVIIKQPIGIMRYQG 250

Query: 892  VAKGLYVASSSGKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDP 713
            VA GLYVASSSGKPALSKV +LERD+  N TLVQVEI SGRPHQIRIHL+FIGHPLLGDP
Sbjct: 251  VANGLYVASSSGKPALSKVDVLERDIPGNCTLVQVEIQSGRPHQIRIHLSFIGHPLLGDP 310

Query: 712  LYAIGGHPKFVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEIT 533
            LY  GGHPK       ++ FAQDGGYQRP  PVPGDCGY+LHAH LV  HP   +VIEI 
Sbjct: 311  LYVTGGHPKCFNSESGENDFAQDGGYQRPINPVPGDCGYYLHAHHLVLHHPTMKKVIEII 370

Query: 532  APLPPMLQTQEEAHSSTAAGI 470
            APLP +LQTQ+EA     A I
Sbjct: 371  APLPHVLQTQKEASQEHCAQI 391


>ref|XP_010253580.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nelumbo nucifera]
            gi|719992467|ref|XP_010253581.1| PREDICTED: RNA
            pseudouridine synthase 5 isoform X1 [Nelumbo nucifera]
          Length = 399

 Score =  543 bits (1398), Expect = e-151
 Identities = 271/382 (70%), Positives = 308/382 (80%), Gaps = 7/382 (1%)
 Frame = -1

Query: 1594 EMQERGKAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQ 1415
            E  + G+ FGVPWP+LNDGLTY+D VRP ++ ST+I+FYS+K+ NSAP+QGWLQRI+NGQ
Sbjct: 11   ERAQTGETFGVPWPDLNDGLTYTDTVRPSNAASTMIEFYSTKYKNSAPLQGWLQRIRNGQ 70

Query: 1414 ITLDGQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPG 1235
            IT+DG+VV DP TILR GSEL+Y RLPWKEP APYLLE+L+EDDD+VA NKPSGLQVLPG
Sbjct: 71   ITVDGEVVKDPHTILRAGSELMYHRLPWKEPDAPYLLEILYEDDDLVAFNKPSGLQVLPG 130

Query: 1234 GLFQQRTVLTQLQWR------PEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAK 1073
            GLFQQRTVLTQLQWR           S+   AQ+ HPVPVHRLGRGTSGILLCAKSK+AK
Sbjct: 131  GLFQQRTVLTQLQWRECQGISTSLGLSTNPGAQQQHPVPVHRLGRGTSGILLCAKSKLAK 190

Query: 1072 ARLAEYFADGTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPG 893
            +RLA YFA+GT+ V  NR  +M+ G  RRI KVYRALA+GIIDKDEV+IKQPIGIM Y G
Sbjct: 191  SRLAAYFAEGTSVVGDNRKSNMDLGGVRRISKVYRALASGIIDKDEVIIKQPIGIMRYQG 250

Query: 892  VAKGLYVASSS-GKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGD 716
            VA GLYVASSS GKPALSKV +LERD+  N TLVQVEI SGRPHQIRIHL+FIGHPLLGD
Sbjct: 251  VANGLYVASSSVGKPALSKVDVLERDIPGNCTLVQVEIQSGRPHQIRIHLSFIGHPLLGD 310

Query: 715  PLYAIGGHPKFVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEI 536
            PLY  GGHPK       ++ FAQDGGYQRP  PVPGDCGY+LHAH LV  HP   +VIEI
Sbjct: 311  PLYVTGGHPKCFNSESGENDFAQDGGYQRPINPVPGDCGYYLHAHHLVLHHPTMKKVIEI 370

Query: 535  TAPLPPMLQTQEEAHSSTAAGI 470
             APLP +LQTQ+EA     A I
Sbjct: 371  IAPLPHVLQTQKEASQEHCAQI 392


>ref|XP_010658419.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Vitis vinifera]
          Length = 393

 Score =  536 bits (1380), Expect = e-149
 Identities = 262/367 (71%), Positives = 304/367 (82%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            K FGVPWP+ NDGLTY+D V   DS  TLI +YSSKH NSAP+QGWLQRI  GQIT+DG 
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VVT+P TILR GS+L+Y RLPW+EP APYLLE+L+EDDD++ALNKPSGLQVLPGGLFQQR
Sbjct: 63   VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQLQWR  K NS   A Q+SH VPVHRLGRGTSGILLCAK+K+AK RLA YFADGT+
Sbjct: 123  TVLTQLQWRANKQNSL-PACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTS 181

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             V  NRD DM+  T R+I K+YRAL  GI+DKDE+VI+QPIG++ YPGVAKGLYVAS SG
Sbjct: 182  VVGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSG 241

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV+ILERD+Q +  +VQVEI SGRPHQIRIHL+FIGHPLLGDPLY  GG PK  +
Sbjct: 242  KPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCD 301

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
               +++S+A DGGYQRP +PVPGDCGYHLHAH+LV  HP  +EVI+ITAPLPP+L+T+ E
Sbjct: 302  AEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNEVIKITAPLPPVLRTRGE 361

Query: 496  AHSSTAA 476
                T A
Sbjct: 362  EEELTEA 368


>ref|XP_007009784.1| Pseudouridine synthase family protein [Theobroma cacao]
            gi|508726697|gb|EOY18594.1| Pseudouridine synthase family
            protein [Theobroma cacao]
          Length = 378

 Score =  530 bits (1365), Expect = e-147
 Identities = 258/370 (69%), Positives = 301/370 (81%)
 Frame = -1

Query: 1594 EMQERGKAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQ 1415
            + Q +   FG+PWPELNDGL Y D ++P DS  TLI+FYSSK+ NSAP QGWLQRIQNGQ
Sbjct: 4    DSQTQSLVFGLPWPELNDGLFYDDVIKPSDSELTLIEFYSSKYKNSAPSQGWLQRIQNGQ 63

Query: 1414 ITLDGQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPG 1235
            I++DG+VV DP+TILR  SEL+Y RLPWKEP AP+ LEVL+EDDDM+ALNKPSGLQVLPG
Sbjct: 64   ISVDGRVVRDPNTILRGSSELVYHRLPWKEPDAPHALEVLYEDDDMIALNKPSGLQVLPG 123

Query: 1234 GLFQQRTVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEY 1055
            GLFQQRTVLTQL WR  K  SS  A+Q+SHPVPVHRLGRGTSGILLCAK+K AK  LA Y
Sbjct: 124  GLFQQRTVLTQLSWRMRKQTSS-LASQESHPVPVHRLGRGTSGILLCAKTKAAKTCLAAY 182

Query: 1054 FADGTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLY 875
            FADGT+ +  N +  M+   TR+I K+YRAL TGI+ +D+VVI QPIGI+ YPGVAKGLY
Sbjct: 183  FADGTSLIGANSNRKMQPSCTRKISKIYRALVTGILGEDKVVINQPIGIVQYPGVAKGLY 242

Query: 874  VASSSGKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGG 695
            VAS SGKPALSKV +LE+D Q+N TLVQV+I SGRPHQIRIHL+FIGHPLLGDPLY  GG
Sbjct: 243  VASPSGKPALSKVEVLEKDEQQNHTLVQVQIESGRPHQIRIHLSFIGHPLLGDPLYIAGG 302

Query: 694  HPKFVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPM 515
             P+  +    D+++AQDGGYQRP  PVPGDCGY+LHAHRL+  HP   E+I ITAPLPP+
Sbjct: 303  QPRCFDSEFVDENYAQDGGYQRPVNPVPGDCGYYLHAHRLLLSHPTTDEIINITAPLPPV 362

Query: 514  LQTQEEAHSS 485
            LQTQ+E   S
Sbjct: 363  LQTQDEVRRS 372


>ref|XP_010253584.1| PREDICTED: RNA pseudouridine synthase 5 isoform X4 [Nelumbo nucifera]
          Length = 380

 Score =  520 bits (1340), Expect = e-144
 Identities = 256/363 (70%), Positives = 294/363 (80%), Gaps = 7/363 (1%)
 Frame = -1

Query: 1594 EMQERGKAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQ 1415
            E  + G+ FGVPWP+LNDGLTY+D VRP ++ ST+I+FYS+K+ NSAP+QGWLQRI+NGQ
Sbjct: 11   ERAQTGETFGVPWPDLNDGLTYTDTVRPSNAASTMIEFYSTKYKNSAPLQGWLQRIRNGQ 70

Query: 1414 ITLDGQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPG 1235
            IT+DG+VV DP TILR GSEL+Y RLPWKEP APYLLE+L+EDDD+VA NKPSGLQVLPG
Sbjct: 71   ITVDGEVVKDPHTILRAGSELMYHRLPWKEPDAPYLLEILYEDDDLVAFNKPSGLQVLPG 130

Query: 1234 GLFQQRTVLTQLQWR------PEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAK 1073
            GLFQQRTVLTQLQWR           S+   AQ+ HPVPVHRLGRGTSGILLCAKSK+AK
Sbjct: 131  GLFQQRTVLTQLQWRECQGISTSLGLSTNPGAQQQHPVPVHRLGRGTSGILLCAKSKLAK 190

Query: 1072 ARLAEYFADGTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPG 893
            +RLA YFA+GT+ V  NR  +M+ G  RRI KVYRALA+GIIDKDEV+IKQPIGIM Y G
Sbjct: 191  SRLAAYFAEGTSVVGDNRKSNMDLGGVRRISKVYRALASGIIDKDEVIIKQPIGIMRYQG 250

Query: 892  VAKGLYVASSS-GKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGD 716
            VA GLYVASSS GKPALSKV +LERD+  N TLVQVEI SGRPHQIRIHL+FIGHPLLGD
Sbjct: 251  VANGLYVASSSVGKPALSKVDVLERDIPGNCTLVQVEIQSGRPHQIRIHLSFIGHPLLGD 310

Query: 715  PLYAIGGHPKFVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEI 536
            PLY  GGHPK       ++ FAQDGGYQRP  PVPGDCGY+LHAH LV  HP   ++ ++
Sbjct: 311  PLYVTGGHPKCFNSESGENDFAQDGGYQRPINPVPGDCGYYLHAHHLVLHHPTMKKISDM 370

Query: 535  TAP 527
              P
Sbjct: 371  AVP 373


>ref|XP_011031774.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Populus
            euphratica]
          Length = 378

 Score =  520 bits (1338), Expect = e-144
 Identities = 256/362 (70%), Positives = 300/362 (82%), Gaps = 3/362 (0%)
 Frame = -1

Query: 1573 AFGVPWPELNDGLTYSDFVRPL-DSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            +FG PWP+LNDGL Y+D V    DSG TLI FYSSK+ NSAP+QGWLQRI NGQIT+DG+
Sbjct: 13   SFGSPWPDLNDGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV +P  ILRDG EL+Y RLPW+EP APYLL+VL+EDDDM+ALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMIALNKPPGLQVLPGGLFQQR 132

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVL QLQWR  K +SS  A Q SHPVPVHRLGRGTSGILLCAK+KVAK  LA YFADGT+
Sbjct: 133  TVLMQLQWRASKGSSS-LAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTS 191

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             +  + + +ME   TR+I KVYRAL  GI+++D+++IKQPIG M YPGVAKGLYVAS SG
Sbjct: 192  LIGDSSNANMEKSKTRKISKVYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSG 251

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LERD Q N+TLVQVEI SGRPHQIRIHL+FIGHPLLGDPLY +GG P+  +
Sbjct: 252  KPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPRCFD 311

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLV--HRHPAHSEVIEITAPLPPMLQTQ 503
                D+SFA+DGGY+RP +PVPGDCGY+LHAH+LV  H HP+ +EVI+ITAPLP +L+TQ
Sbjct: 312  SEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPHPSKNEVIKITAPLPSILRTQ 371

Query: 502  EE 497
             E
Sbjct: 372  AE 373


>ref|XP_008233344.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Prunus mume]
          Length = 393

 Score =  517 bits (1331), Expect = e-143
 Identities = 246/360 (68%), Positives = 303/360 (84%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            + FG+PWP+LN GL Y+D VR  DS  TLI+FYSSK+ NSAP+QGWLQRI+NGQIT+DG+
Sbjct: 11   QTFGLPWPDLNHGLLYNDVVRASDSELTLIEFYSSKYKNSAPLQGWLQRIRNGQITVDGE 70

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV DP TILR G EL+Y RLPW+EP APYLLEVL+EDDDM+ALNKPSGLQVLPGGLFQQR
Sbjct: 71   VVKDPSTILRVGLELVYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGLQVLPGGLFQQR 130

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQL W+  K   S  + Q+ HPVPVHRLGRGTSGILLCAK+K AK +LA YFADGT+
Sbjct: 131  TVLTQLLWQATK-KISPLSCQEPHPVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTS 189

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
            N+  + +  ME    R+I K+YRAL TGI+ +D+V++KQPIG++ YPGVAKGLYVAS++G
Sbjct: 190  NIGDDSNTSMEAHAVRKISKIYRALVTGILCEDKVIVKQPIGVVRYPGVAKGLYVASATG 249

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LER++ +NRTLVQVEI SGRPHQIRIHL++IGHPLLGDPLY +GG PK ++
Sbjct: 250  KPALSKVEVLEREIHKNRTLVQVEIQSGRPHQIRIHLSYIGHPLLGDPLYVLGGQPKCLD 309

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA DGG+ RPT+PVPGDCGY+LHAH+++  HP+ +EVI++TAPLP +L+TQ+E
Sbjct: 310  SDFVDESFAVDGGFLRPTKPVPGDCGYNLHAHQVILSHPSSNEVIKVTAPLPAILRTQQE 369


>ref|XP_004307403.1| PREDICTED: RNA pseudouridine synthase 5 [Fragaria vesca subsp. vesca]
          Length = 375

 Score =  516 bits (1329), Expect = e-143
 Identities = 249/360 (69%), Positives = 301/360 (83%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            + FG+PWP+LNDGL+Y+D V+  DS  TLI+FYSSK+ +SAP+QGWLQRI+NGQIT+DG+
Sbjct: 11   QTFGLPWPDLNDGLSYNDVVKSSDSELTLIEFYSSKYKSSAPLQGWLQRIRNGQITVDGE 70

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV D DTILR GSEL+Y RLPW EP APYLLEVL+EDDDM+ALNKP GLQVLPGGLFQQR
Sbjct: 71   VVRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQVLPGGLFQQR 130

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQL WR E       A QKSH VPVHRLGRGTSGILLCAK+K AK +LA YFADGT+
Sbjct: 131  TVLTQLLWR-ESQKFDHLACQKSHLVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTS 189

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
            ++  +   + +  TTR+I K+YRAL TGII +DEV++KQPIG + YPGVAKGLY+AS +G
Sbjct: 190  HIGDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGTVRYPGVAKGLYIASPAG 249

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +L+RD+Q+N T+VQVEI SGRPHQIRIHL+FIGHPLLGDPLY  GG PK + 
Sbjct: 250  KPALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVAGGQPKCLG 309

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA DGG++RPT+PVPGDCGY+LHAH++V  HP+ +EVI+ITAPLP +L+T+EE
Sbjct: 310  SDLVDESFADDGGFKRPTKPVPGDCGYNLHAHQVVLSHPSSNEVIKITAPLPLVLRTREE 369


>ref|XP_011031773.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Populus
            euphratica]
          Length = 379

 Score =  515 bits (1326), Expect = e-143
 Identities = 256/363 (70%), Positives = 300/363 (82%), Gaps = 4/363 (1%)
 Frame = -1

Query: 1573 AFGVPWPELNDGLTYSDFVRPL-DSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            +FG PWP+LNDGL Y+D V    DSG TLI FYSSK+ NSAP+QGWLQRI NGQIT+DG+
Sbjct: 13   SFGSPWPDLNDGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV +P  ILRDG EL+Y RLPW+EP APYLL+VL+EDDDM+ALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMIALNKPPGLQVLPGGLFQQR 132

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVL QLQWR  K +SS  A Q SHPVPVHRLGRGTSGILLCAK+KVAK  LA YFADGT+
Sbjct: 133  TVLMQLQWRASKGSSS-LAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTS 191

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             +  + + +ME   TR+I KVYRAL  GI+++D+++IKQPIG M YPGVAKGLYVAS SG
Sbjct: 192  LIGDSSNANMEKSKTRKISKVYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSG 251

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LERD Q N+TLVQVEI SGRPHQIRIHL+FIGHPLLGDPLY +GG P+  +
Sbjct: 252  KPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPRCFD 311

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLV--HRHPAHSE-VIEITAPLPPMLQT 506
                D+SFA+DGGY+RP +PVPGDCGY+LHAH+LV  H HP+ +E VI+ITAPLP +L+T
Sbjct: 312  SEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPHPSKNEQVIKITAPLPSILRT 371

Query: 505  QEE 497
            Q E
Sbjct: 372  QAE 374


>ref|XP_012086507.1| PREDICTED: RNA pseudouridine synthase 5 [Jatropha curcas]
          Length = 389

 Score =  514 bits (1325), Expect = e-143
 Identities = 254/361 (70%), Positives = 295/361 (81%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            ++FG+PWP+LNDGL YSD     DS  TLI FYS K+NNSAP+QGWLQRIQNGQI++DG 
Sbjct: 25   RSFGLPWPDLNDGLFYSDVASSSDSELTLIDFYSGKYNNSAPLQGWLQRIQNGQISIDGI 84

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV + +T LR GSEL+Y RLPW+EP APY+L++L+EDDDM+ALNKPS LQVLPGGLFQQR
Sbjct: 85   VVKESNTKLRSGSELVYHRLPWREPDAPYMLQILYEDDDMIALNKPSCLQVLPGGLFQQR 144

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQLQW   K  SS  A+Q+SHPVPVHRLGRGTSGILLCAKSK+AK R+A YFADGT+
Sbjct: 145  TVLTQLQWWARKQTSS-LASQESHPVPVHRLGRGTSGILLCAKSKLAKTRIAAYFADGTS 203

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             V  N D        R+I K+YRAL  GII +D+V+IKQPIG + YPGVAKGLYVAS SG
Sbjct: 204  LVGDNSDTGTLLVKRRKISKIYRALVVGIIVEDKVIIKQPIGTVRYPGVAKGLYVASPSG 263

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LERD+Q N TLVQVEI SGRPHQIRIHL+FIGHPLLGDPLY +GG PK  +
Sbjct: 264  KPALSKVEVLERDVQGNHTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPKCFD 323

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFAQDGGYQRPT+PVPGDCGY+LHAH+L   HP  +EVI++TAPLP  LQT+ E
Sbjct: 324  SEFVDESFAQDGGYQRPTKPVPGDCGYYLHAHQLSLLHPTTNEVIKVTAPLPSNLQTRAE 383

Query: 496  A 494
            A
Sbjct: 384  A 384


>ref|XP_008789068.1| PREDICTED: RNA pseudouridine synthase 5 [Phoenix dactylifera]
          Length = 442

 Score =  514 bits (1325), Expect = e-143
 Identities = 252/363 (69%), Positives = 296/363 (81%), Gaps = 4/363 (1%)
 Frame = -1

Query: 1573 AFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQV 1394
            +FGVPWPE N+GL+Y+D VR   S  TLI FYSSK+ +SAP++GWL RI+NGQIT+DG++
Sbjct: 68   SFGVPWPEFNEGLSYTDVVRSPSSALTLIDFYSSKYKHSAPLEGWLHRIKNGQITVDGEM 127

Query: 1393 VTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQRT 1214
            +TDP  +LRDGS+++Y RLPWKEP APYLLEVL+EDDDMVALNKPSGLQVLPGGLFQQRT
Sbjct: 128  ITDPSMVLRDGSKVVYYRLPWKEPSAPYLLEVLYEDDDMVALNKPSGLQVLPGGLFQQRT 187

Query: 1213 VLTQLQWRPEKPN----SSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFAD 1046
            VL QLQW+  + N    S + + Q++HPVPVHRLGRGTSGILLCAK+K+AK+ LA YFA 
Sbjct: 188  VLMQLQWKEWRKNTLGYSKQDSTQEAHPVPVHRLGRGTSGILLCAKTKLAKSCLAAYFAK 247

Query: 1045 GTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVAS 866
            GT N+ +NR         RRI K YR+L TG+I  +EV+IKQPIG+MHYPGVA GLYVAS
Sbjct: 248  GTENIGENRCEGKP--GMRRISKFYRSLVTGVIVNNEVLIKQPIGVMHYPGVANGLYVAS 305

Query: 865  SSGKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPK 686
            SSGKPA+SKV +LERDLQ N+TLVQVEIHSGRPHQIRIHLA IGHPLLGDPLY IGG PK
Sbjct: 306  SSGKPAMSKVYVLERDLQRNQTLVQVEIHSGRPHQIRIHLASIGHPLLGDPLYGIGGCPK 365

Query: 685  FVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQT 506
              E  P DD FA+DGGYQ+P   VPGDCGY LHAH+LV  HP    ++ ITAPLPP+LQT
Sbjct: 366  PFEPDPIDDGFAEDGGYQKPVHSVPGDCGYFLHAHQLVLHHPTIHVMVGITAPLPPILQT 425

Query: 505  QEE 497
            +EE
Sbjct: 426  REE 428


>ref|XP_007143685.1| hypothetical protein PHAVU_007G093000g [Phaseolus vulgaris]
            gi|561016875|gb|ESW15679.1| hypothetical protein
            PHAVU_007G093000g [Phaseolus vulgaris]
          Length = 365

 Score =  513 bits (1322), Expect = e-142
 Identities = 249/361 (68%), Positives = 298/361 (82%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            + FG+PWPE NDGL+Y D VR  DSG TLI+FY +K+ +SAP+QGWLQRI++GQIT DG+
Sbjct: 5    RKFGIPWPECNDGLSYDDVVRSSDSGLTLIEFYFTKYKSSAPLQGWLQRIKSGQITFDGR 64

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VVTD  T+LR GS+L+Y RLPWKEP AP+++EVL+EDD+M+ALNKPSGLQVLPGGLFQQR
Sbjct: 65   VVTDSSTVLRVGSKLVYHRLPWKEPDAPHMIEVLYEDDEMIALNKPSGLQVLPGGLFQQR 124

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQLQW            +K HPVPVHRLGRGTSGILLCAK+K+A+ARLA YFADGT+
Sbjct: 125  TVLTQLQWEAN-------LHKKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTS 177

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
            ++   RD + E G   +I K+YR LA+GI++ DEV I QPIG++ YPGVAKGLYVAS SG
Sbjct: 178  HIGGKRDTNGEIG---KIAKIYRGLASGIVENDEVTINQPIGVVKYPGVAKGLYVASQSG 234

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALS V ILER++QEN TLVQV+I SGRPHQIRIHL+FIGHPLLGDPLY  GG PK ++
Sbjct: 235  KPALSVVGILERNVQENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYGDGGQPKCLD 294

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA+DGGYQRPT+PVPGDCGY+LHAH+LV  HP  +E+IEITAPLP +LQT EE
Sbjct: 295  CDSIDESFAEDGGYQRPTKPVPGDCGYNLHAHKLVLSHPLTNELIEITAPLPSVLQTPEE 354

Query: 496  A 494
            A
Sbjct: 355  A 355


>gb|AES62203.2| pseudouridine synthase Rlu family protein [Medicago truncatula]
          Length = 370

 Score =  513 bits (1320), Expect = e-142
 Identities = 247/361 (68%), Positives = 299/361 (82%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            K  G+PWPE NDGL+Y D VRP D+G TLI+FYS+K+ +SAP+QGWLQRI++ QITLD +
Sbjct: 5    KKIGIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDAR 64

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VVTDP+TILR GS+L+Y R+PWKEP AP+ +EVL+EDDD++ALNKPSGLQVLPGGLFQQR
Sbjct: 65   VVTDPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQR 124

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQLQW      S+  A QK HPVPVHRLGRGTSGILLCAK+K+A+ARLA YFADGT+
Sbjct: 125  TVLTQLQWETNN-KSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTS 183

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             ++     + E G   +I K+YRAL +GII+ D+V I QPIG++ YPGVAKGLYVAS SG
Sbjct: 184  RIEGKGHTNQELG---KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSG 240

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALS V +LER+++EN TLVQV+I SGRPHQIRIHL+FIGHPLLGDPLYA+GG PK ++
Sbjct: 241  KPALSVVHVLERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLLGDPLYAVGGQPKCLD 300

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA+DGGY RP++PVPGDCGYHLHAHRL   HP  +E+IE+ APLP +LQT EE
Sbjct: 301  CDFLDESFAEDGGYTRPSKPVPGDCGYHLHAHRLFLSHPITNEIIEMIAPLPSILQTHEE 360

Query: 496  A 494
            A
Sbjct: 361  A 361


>ref|XP_004496322.1| PREDICTED: RNA pseudouridine synthase 5 [Cicer arietinum]
          Length = 368

 Score =  513 bits (1320), Expect = e-142
 Identities = 248/363 (68%), Positives = 299/363 (82%)
 Frame = -1

Query: 1582 RGKAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLD 1403
            R K  GVPWPELNDGL+Y+D VRP D+G TLI+FYS+K+ +SAP+QGWLQRI++ QIT+D
Sbjct: 3    RQKKIGVPWPELNDGLSYNDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITVD 62

Query: 1402 GQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQ 1223
             +VVTDP+T+LR GS+L+Y RLPWKEP AP+ ++VL+EDDD++ALNKPSGLQVLPGGLFQ
Sbjct: 63   AKVVTDPNTLLRAGSKLVYHRLPWKEPDAPHTIQVLYEDDDIIALNKPSGLQVLPGGLFQ 122

Query: 1222 QRTVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADG 1043
            QRTVLTQLQW       +  A QK HPVPVHRLGRGTSGILLCAK+K+A+  LA YFADG
Sbjct: 123  QRTVLTQLQWETNN-KCTFEAHQKPHPVPVHRLGRGTSGILLCAKTKLARVHLASYFADG 181

Query: 1042 TANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASS 863
            T+ +   RD + E G   +I K+YRAL +GIID D+V I QPIG++ YPGVAKGLYVAS 
Sbjct: 182  TSRIGGKRDTNQELG---KIAKIYRALVSGIIDNDKVTIDQPIGMVKYPGVAKGLYVASQ 238

Query: 862  SGKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKF 683
            SGKPALS V ILER+++EN TLVQV+I SGRPHQIRIHL+FIGHPL+GDPLYA+GG PK 
Sbjct: 239  SGKPALSVVDILERNVKENSTLVQVKIQSGRPHQIRIHLSFIGHPLIGDPLYAVGGQPKC 298

Query: 682  VELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQ 503
            ++    DDSFA+DGGY RP +PVPGDCGY+LHAH L+  HP  +E+IEI APLP +LQT 
Sbjct: 299  LDYDFLDDSFAEDGGYPRPPKPVPGDCGYYLHAHELLLTHPITNEIIEIIAPLPSILQTH 358

Query: 502  EEA 494
            EEA
Sbjct: 359  EEA 361


>ref|XP_009333717.1| PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Pyrus x
            bretschneideri]
          Length = 386

 Score =  512 bits (1319), Expect = e-142
 Identities = 246/365 (67%), Positives = 300/365 (82%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            + FG+PWP+LNDGL Y+D VR  DS  TLI+FYSSK+ NSAP+QGWLQRI++GQIT+D +
Sbjct: 11   QTFGLPWPDLNDGLFYNDVVRASDSELTLIEFYSSKYKNSAPLQGWLQRIRSGQITVDRE 70

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV DPDTILR GS+L Y RLPW+EP APYLLEVL+EDDDM+ALNKPSGLQVLP GLFQQR
Sbjct: 71   VVRDPDTILRVGSKLTYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGLQVLPQGLFQQR 130

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQL WR  +   S  + Q+ HPVPVHRLGRGTSGILLCAK+K AK +LA YFADGT+
Sbjct: 131  TVLTQLLWRATQ-KISHLSCQQPHPVPVHRLGRGTSGILLCAKTKHAKTQLAAYFADGTS 189

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
            N+    + D+E  T R+I K+YRAL TGI+ +D+V++KQPIG++ YPGVAKGLYVAS +G
Sbjct: 190  NIGDGSNADVEPRTERKISKIYRALVTGIVCEDKVIVKQPIGMVRYPGVAKGLYVASPTG 249

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LER++ +N+TLVQVEI SGRPHQIRIHL++IGHPLLGDPLY  GG PK  +
Sbjct: 250  KPALSKVEVLEREIHKNQTLVQVEIQSGRPHQIRIHLSYIGHPLLGDPLYVPGGQPKCSD 309

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA DGG++RPT PVPGDCGY+LHAH+++  HPA +EVI++ APLPP L+ Q+E
Sbjct: 310  FDLVDESFADDGGFRRPTNPVPGDCGYNLHAHQVILSHPASNEVIKVIAPLPPFLRKQQE 369

Query: 496  AHSST 482
                T
Sbjct: 370  TEQLT 374


>ref|XP_008381972.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Malus domestica]
          Length = 386

 Score =  512 bits (1318), Expect = e-142
 Identities = 247/365 (67%), Positives = 299/365 (81%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            + FG+PWP+LNDGL Y+D VR  DS  TLI+FYSSK+NNSAP+QGWLQRI++GQIT+DG+
Sbjct: 11   QTFGLPWPDLNDGLFYNDVVRTPDSELTLIEFYSSKYNNSAPLQGWLQRIRSGQITVDGE 70

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV DPDTILR GS+L Y RLPW+EP APYLLEVL+EDDDM+ALNKPSGLQVLP GLFQQR
Sbjct: 71   VVRDPDTILRVGSKLAYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGLQVLPQGLFQQR 130

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQL WR  +   S  + Q+ HPVP HRLGRGTSGILLCAK+K AK +LA Y ADGT+
Sbjct: 131  TVLTQLLWRATQ-KISPLSCQQPHPVPXHRLGRGTSGILLCAKTKHAKTQLAAYLADGTS 189

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             +    + DME  T R+I K+YRAL TGI+ +D+V++KQPIG++ YPGVAKGLYVAS +G
Sbjct: 190  XIGDGSNADMEPRTERKISKIYRALVTGIVCEDKVIVKQPIGMVRYPGVAKGLYVASPTG 249

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LER++ +N+TLVQVEI SGRPHQIRIHL++IGHPLLGDPLY  GG PK  +
Sbjct: 250  KPALSKVEVLEREIHKNQTLVQVEIQSGRPHQIRIHLSYIGHPLLGDPLYVPGGQPKCSD 309

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEE 497
                D+SFA DGG++RPT PVPGDCGY+LHAH++   HPA +EVI++ APLPP L+TQ+E
Sbjct: 310  FDLVDESFADDGGFKRPTNPVPGDCGYNLHAHQVTLSHPASNEVIKVIAPLPPXLRTQQE 369

Query: 496  AHSST 482
                T
Sbjct: 370  TEQLT 374


>ref|XP_002312025.1| hypothetical protein POPTR_0008s04160g [Populus trichocarpa]
            gi|222851845|gb|EEE89392.1| hypothetical protein
            POPTR_0008s04160g [Populus trichocarpa]
          Length = 377

 Score =  511 bits (1315), Expect = e-142
 Identities = 253/361 (70%), Positives = 296/361 (81%), Gaps = 2/361 (0%)
 Frame = -1

Query: 1573 AFGVPWPELNDGLTYSDFVRPL-DSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            +FG PWP+LN+GL Y+D V    DSG TLI FYSSK+ NSAP+QGWLQRI NGQIT+DG+
Sbjct: 13   SFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VV +P  ILRDG EL+Y RLPW+EP APYLL+VL+EDDDMVALNKP GLQVLPGGLFQQR
Sbjct: 73   VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQR 132

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVL QLQWR  K +SS  A Q SHPVPVHRLGRGTSGILLCAK+KVAK  LA YFADGT+
Sbjct: 133  TVLMQLQWRASKGSSS-LAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTS 191

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             +  + + +ME    R+I K+YRAL  GI+++D+++IKQPIG M YPGVAKGLYVAS SG
Sbjct: 192  LIGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSG 251

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV +LERD Q N+TLVQVEI SGRPHQIRIHL+FIGHPLLGDPLY +GG P   +
Sbjct: 252  KPALSKVEVLERDSQLNQTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYDVGGQPMCFD 311

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSE-VIEITAPLPPMLQTQE 500
                D+SFA+DGGY+RP +PVPGDCGY+LHAH+LV  HP  +E VI+ITAPLP +L+TQ 
Sbjct: 312  SEHEDESFAEDGGYERPAKPVPGDCGYYLHAHQLVLSHPTKNEQVIKITAPLPSILRTQA 371

Query: 499  E 497
            E
Sbjct: 372  E 372


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  510 bits (1313), Expect = e-141
 Identities = 248/343 (72%), Positives = 286/343 (83%)
 Frame = -1

Query: 1576 KAFGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQ 1397
            K FGVPWP+ NDGLTY+D V   DS  TLI +YSSKH NSAP+QGWLQRI  GQIT+DG 
Sbjct: 3    KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 1396 VVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQR 1217
            VVT+P TILR GS+L+Y RLPW+EP APYLLE+L+EDDD++ALNKPSGLQVLPGGLFQQR
Sbjct: 63   VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 1216 TVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTA 1037
            TVLTQLQWR  K NS   A Q+SH VPVHRLGRGTSGILLCAK+K+AK RLA YFADGT+
Sbjct: 123  TVLTQLQWRANKQNSL-PACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTS 181

Query: 1036 NVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSG 857
             V  NRD DM+  T R+I K+YRAL  GI+DKDE+VI+QPIG++ YPGVAKGLYVAS SG
Sbjct: 182  VVGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSG 241

Query: 856  KPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVE 677
            KPALSKV+ILERD+Q +  +VQVEI SGRPHQIRIHL+FIGHPLLGDPLY  GG PK  +
Sbjct: 242  KPALSKVSILERDVQGDHMIVQVEIQSGRPHQIRIHLSFIGHPLLGDPLYVPGGQPKCCD 301

Query: 676  LGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSE 548
               +++S+A DGGYQRP +PVPGDCGYHLHAH+LV  HP  +E
Sbjct: 302  AEFTNESYALDGGYQRPVKPVPGDCGYHLHAHQLVLSHPTTNE 344


>ref|XP_010099639.1| RNA pseudourine synthase 5 [Morus notabilis]
            gi|587891482|gb|EXB80105.1| RNA pseudourine synthase 5
            [Morus notabilis]
          Length = 377

 Score =  509 bits (1312), Expect = e-141
 Identities = 252/370 (68%), Positives = 300/370 (81%), Gaps = 2/370 (0%)
 Frame = -1

Query: 1585 ERGKA--FGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQI 1412
            ER +A  FG  WPELNDGL YSD VR  DS STLIQFYS K+ NSAP+QGWLQRI+NGQI
Sbjct: 7    ERAQALRFGFSWPELNDGLFYSDVVRTSDSESTLIQFYSRKYKNSAPLQGWLQRIRNGQI 66

Query: 1411 TLDGQVVTDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGG 1232
            T++G+VV DPDTIL  GSEL+Y RLPWKEP APY+LE+L+ED DM+AL+KPS LQVLPGG
Sbjct: 67   TVNGRVVRDPDTILSIGSELVYHRLPWKEPGAPYILEILYEDGDMIALDKPSELQVLPGG 126

Query: 1231 LFQQRTVLTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYF 1052
            LFQQRTVLTQLQWR  K +SS    + + PVPVHRLGRGTSGILLCAK+K AK +LA YF
Sbjct: 127  LFQQRTVLTQLQWRATKQSSSLVCCEPN-PVPVHRLGRGTSGILLCAKTKFAKTQLAAYF 185

Query: 1051 ADGTANVKKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYV 872
            ADGT+ V  N   ++E    R+ILK+YRAL TGI+ +D+V+++QPIG + YPGVAKGLYV
Sbjct: 186  ADGTSYVGGNSKNNLELNARRKILKIYRALVTGIVCEDKVIVEQPIGTVQYPGVAKGLYV 245

Query: 871  ASSSGKPALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGH 692
            AS SGKPALSKV +LERD+++N TLV+VEI SGRPHQIRIHL+FIGHPLLGDPLY +GG 
Sbjct: 246  ASPSGKPALSKVEVLERDVEKNCTLVKVEIQSGRPHQIRIHLSFIGHPLLGDPLYVVGGR 305

Query: 691  PKFVELGPSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPML 512
            P+  +    D SFAQDGG+ RP +PVPGDCGY LHAH +   HP  +EVIEITAPLPP+L
Sbjct: 306  PRCFDPEFVDGSFAQDGGFPRPAKPVPGDCGYTLHAHHVSLSHPTTNEVIEITAPLPPVL 365

Query: 511  QTQEEAHSST 482
             T++EA  ++
Sbjct: 366  WTRQEAQETS 375


>ref|XP_012452101.1| PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Gossypium
            raimondii] gi|763800749|gb|KJB67704.1| hypothetical
            protein B456_010G204900 [Gossypium raimondii]
          Length = 382

 Score =  509 bits (1312), Expect = e-141
 Identities = 256/362 (70%), Positives = 293/362 (80%)
 Frame = -1

Query: 1570 FGVPWPELNDGLTYSDFVRPLDSGSTLIQFYSSKHNNSAPMQGWLQRIQNGQITLDGQVV 1391
            FG+PWPELNDGL YSD V   DS  TLI FYS K+ NSAP+QGWLQRIQNGQI++DG+VV
Sbjct: 12   FGIPWPELNDGLFYSDVVPHSDSELTLIDFYSRKYKNSAPLQGWLQRIQNGQISVDGRVV 71

Query: 1390 TDPDTILRDGSELLYCRLPWKEPCAPYLLEVLFEDDDMVALNKPSGLQVLPGGLFQQRTV 1211
             DP+TIL   S L+Y RLPWKEP  P+LLEVL+EDDDMVALNKPSGLQVLPGGLFQQRTV
Sbjct: 72   KDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLFQQRTV 131

Query: 1210 LTQLQWRPEKPNSSRAAAQKSHPVPVHRLGRGTSGILLCAKSKVAKARLAEYFADGTANV 1031
            LTQL W  +K NS+   +Q++HPVPVHRLGRGTSGILLCAK+KVAK RLA YFADGT+ V
Sbjct: 132  LTQLCWSVKKQNST-LNSQETHPVPVHRLGRGTSGILLCAKTKVAKTRLAAYFADGTSLV 190

Query: 1030 KKNRDMDMEFGTTRRILKVYRALATGIIDKDEVVIKQPIGIMHYPGVAKGLYVASSSGKP 851
                +       TR+I K+YRAL TGI+  D+V+I QPIGI+ YPGVAKGLYVAS SGKP
Sbjct: 191  GATSNRKAARSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVAKGLYVASPSGKP 250

Query: 850  ALSKVTILERDLQENRTLVQVEIHSGRPHQIRIHLAFIGHPLLGDPLYAIGGHPKFVELG 671
            ALSKV +LERD ++N TLVQVEI SGRPHQIRIHL+FIGHPLLGDPLY  GG P+  +  
Sbjct: 251  ALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGGEPRCFDPE 310

Query: 670  PSDDSFAQDGGYQRPTRPVPGDCGYHLHAHRLVHRHPAHSEVIEITAPLPPMLQTQEEAH 491
              D+SFAQDGGYQRPT PVPGDCGY+LHAHRLV  HP  +E+I ITAPL  +LQT +EA+
Sbjct: 311  LVDESFAQDGGYQRPTNPVPGDCGYYLHAHRLVLSHPTTNEMIYITAPLSTILQTSDEAN 370

Query: 490  SS 485
             S
Sbjct: 371  GS 372