BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00012799
         (1137 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74480.1| hypothetical protein M569_00269, partial [Genlise...   294   e-146
gb|KEH17708.1| DNA-directed RNA polymerase subunit beta [Medicag...   243   e-122
gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast...   313   1e-82
gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]                  313   1e-82
ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum in...   313   1e-82
ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [He...   313   2e-82
ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea su...   312   3e-82
ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea su...   312   3e-82
gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [G...   311   4e-82
gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast...   311   7e-82
gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast...   311   7e-82
ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana su...   311   7e-82
ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [...   310   1e-81
ref|YP_009144618.1| RNA polymerase beta' subunit (chloroplast) [...   310   1e-81
ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arab...   310   1e-81
gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast...   310   2e-81
ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsic...   309   2e-81
ref|YP_008815928.1| RNA polymerase beta' subunit (chloroplast) [...   309   2e-81
dbj|BAE47988.1| RNA polymerase beta' subunit [Nicotiana tomentos...   309   3e-81
emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]     309   3e-81

>gb|EPS74480.1| hypothetical protein M569_00269, partial [Genlisea aurea]
          Length = 1213

 Score =  294 bits (753), Expect(2) = e-146
 Identities = 138/157 (87%), Positives = 146/157 (92%)
 Frame = -2

Query: 692  EGSLIEMNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKS 513
            E SLI +N NFSSMIDRYKHQQLR+GLVSP+QI AWATKILPNG++VGEVTKPYTFHYK+
Sbjct: 1057 EESLIGINHNFSSMIDRYKHQQLRIGLVSPEQIRAWATKILPNGKIVGEVTKPYTFHYKT 1116

Query: 512  NKPEKDGLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYI 333
            NKPE DGLF ERIFGPIKSGICACGNYRVI +EK+ P FCEQCGVEFVDSRIRRYQMGYI
Sbjct: 1117 NKPEMDGLFCERIFGPIKSGICACGNYRVIRDEKDGPNFCEQCGVEFVDSRIRRYQMGYI 1176

Query: 332  KLACPATHVWYLKRLPSYIANLLDKPLKELEGLVYCD 222
            KLACP THVWYLK LPSYIANLLDKPLKELEGLVYCD
Sbjct: 1177 KLACPVTHVWYLKCLPSYIANLLDKPLKELEGLVYCD 1213



 Score =  254 bits (650), Expect(2) = e-146
 Identities = 127/135 (94%), Positives = 129/135 (95%)
 Frame = -3

Query: 1126 GKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 947
            GKSRI DGRTG+PFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG
Sbjct: 922  GKSRIFDGRTGNPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 981

Query: 946  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTILKPEDAPESFRLL 767
            QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI  P+D PESFRLL
Sbjct: 982  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPQDTPESFRLL 1041

Query: 766  VRELRSLALELNHFL 722
            VRELRSLALELNH L
Sbjct: 1042 VRELRSLALELNHCL 1056


>gb|KEH17708.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
          Length = 3148

 Score =  243 bits (621), Expect(2) = e-122
 Identities = 121/142 (85%), Positives = 130/142 (91%)
 Frame = -3

Query: 1126 GKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 947
            GKSRI DGRTGDPFEQPV+IGKSYILKLIHQVD+KIHGRS+G Y+LVTQQP+RGRAKQGG
Sbjct: 981  GKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDEKIHGRSTGPYSLVTQQPVRGRAKQGG 1040

Query: 946  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTILKPEDAPESFRLL 767
            QRVGEMEVWALEGFGVAHILQE+LTYKSDH+ ARQE+L  TI G  I   ED PESFR+L
Sbjct: 1041 QRVGEMEVWALEGFGVAHILQEILTYKSDHLIARQEILNATIWGKRIPNHEDPPESFRVL 1100

Query: 766  VRELRSLALELNHFLVSEKNFQ 701
            VRELRSLALELNHFLVSEKNFQ
Sbjct: 1101 VRELRSLALELNHFLVSEKNFQ 1122



 Score =  224 bits (570), Expect(2) = e-122
 Identities = 106/136 (77%), Positives = 114/136 (83%)
 Frame = -2

Query: 614  LVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKDGLFFERIFGPIKSGICACGN 435
            LVS +   AWA K LPNGE VGEVT+P TFHYK++KPEKDGLF ERIFGPIKSGIC CGN
Sbjct: 1115 LVSEKNFQAWANKNLPNGEAVGEVTRPSTFHYKTDKPEKDGLFCERIFGPIKSGICGCGN 1174

Query: 434  YRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPATHVWYLKRLPSYIANLLDKP 255
             R  G E ED +FC++CGVEFVDSRIRRYQMGYIKLACP THVWYLK LPSYIANLLDKP
Sbjct: 1175 SRASGAENEDERFCQKCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKGLPSYIANLLDKP 1234

Query: 254  LKELEGLVYCDV*FDR 207
            LK+LEGLVY D  F R
Sbjct: 1235 LKKLEGLVYGDFSFAR 1250


>gb|ADD31164.1| RNA polymerase beta' subunit protein (chloroplast) [Ehretia
           acuminata]
          Length = 687

 Score =  313 bits (802), Expect = 1e-82
 Identities = 147/156 (94%), Positives = 151/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>gb|AGL45327.1| RpoC1 (chloroplast) [Sesamum indicum]
          Length = 687

 Score =  313 bits (802), Expect = 1e-82
 Identities = 147/156 (94%), Positives = 151/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_004935657.1| rpoC1 gene product (chloroplast) [Sesamum indicum]
           gi|347448286|gb|AEO92697.1| RNA polymerase beta' subunit
           (chloroplast) [Sesamum indicum]
          Length = 691

 Score =  313 bits (802), Expect = 1e-82
 Identities = 146/152 (96%), Positives = 150/152 (98%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 219
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>ref|YP_009110593.1| RNA polymerase beta' chain (chloroplast) [Hesperelaea palmeri]
           gi|725798277|emb|CED79753.1| RNA polymerase beta' chain
           (chloroplast) [Hesperelaea palmeri]
          Length = 690

 Score =  313 bits (801), Expect = 2e-82
 Identities = 146/156 (93%), Positives = 151/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ER+FGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERVFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_004563772.1| RNA polymerase beta' chain [Olea europaea subsp. cuspidata]
           gi|334084392|emb|CBR23820.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
           gi|334084941|emb|CBJ04289.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
           gi|334085027|emb|CBR23729.1| RNA polymerase beta' chain
           [Olea europaea subsp. cuspidata]
          Length = 690

 Score =  312 bits (799), Expect = 3e-82
 Identities = 146/156 (93%), Positives = 151/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKP+KELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPVKELEGLVYCDFSFAR 156


>ref|YP_004376412.1| RNA polymerase beta' chain [Olea europaea subsp. europaea]
           gi|334701879|ref|YP_004564488.1| RNA polymerase beta'
           chain [Olea europaea subsp. maroccana]
           gi|328795424|emb|CBR30305.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084478|emb|CBR24611.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084564|emb|CBR30397.1| RNA polymerase beta' chain
           [Olea europaea subsp. europaea]
           gi|334084855|emb|CBS29228.1| RNA polymerase beta' chain
           [Olea europaea subsp. maroccana]
           gi|510934395|emb|CCQ09093.1| RNA polymerase beta' chain
           (chloroplast) [Olea europaea subsp. europaea]
          Length = 690

 Score =  312 bits (799), Expect = 3e-82
 Identities = 146/156 (93%), Positives = 151/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKP+KELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPVKELEGLVYCDFSFAR 156


>gb|KJB30917.1| hypothetical protein B456_005G1677001, partial [Gossypium
           raimondii]
          Length = 370

 Score =  311 bits (798), Expect = 4e-82
 Identities = 155/187 (82%), Positives = 160/187 (85%), Gaps = 7/187 (3%)
 Frame = -2

Query: 758 TTIFGS-------GTESFPCI*EELPD*QEGSLIEMNQNFSSMIDRYKHQQLRVGLVSPQ 600
           TTI G          ESF  +  EL    EGSLI MNQNFSSMIDRYKHQQLR+G VSPQ
Sbjct: 185 TTIIGGTIPKPEDAPESFRLLVRELRS-LEGSLIGMNQNFSSMIDRYKHQQLRIGSVSPQ 243

Query: 599 QISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKDGLFFERIFGPIKSGICACGNYRVIG 420
           QISAWA KILPNGE VGEVTKPYTFHYK+NKPEKDGLF ERIFGPIKSGICACGNYRVIG
Sbjct: 244 QISAWAKKILPNGETVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG 303

Query: 419 EEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPATHVWYLKRLPSYIANLLDKPLKELE 240
            +KE PKFCEQCGVEFVDSRIRRYQMGYI+LACP THVWYLKRLPSYIANLLDKPLKELE
Sbjct: 304 NQKEGPKFCEQCGVEFVDSRIRRYQMGYIRLACPVTHVWYLKRLPSYIANLLDKPLKELE 363

Query: 239 GLVYCDV 219
           GLVYCDV
Sbjct: 364 GLVYCDV 370



 Score =  244 bits (624), Expect = 7e-62
 Identities = 122/127 (96%), Positives = 123/127 (96%)
 Frame = -3

Query: 1126 GKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 947
            GKSRI DGRTG PFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGR+KQGG
Sbjct: 86   GKSRIFDGRTGGPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRSKQGG 145

Query: 946  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTILKPEDAPESFRLL 767
            QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI KPEDAPESFRLL
Sbjct: 146  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPKPEDAPESFRLL 205

Query: 766  VRELRSL 746
            VRELRSL
Sbjct: 206  VRELRSL 212


>gb|ADD31179.1| RNA polymerase beta' subunit protein (chloroplast) [Heuchera
           sanguinea]
          Length = 689

 Score =  311 bits (796), Expect = 7e-82
 Identities = 145/156 (92%), Positives = 150/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWA KILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSR+RRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>gb|ADD31175.1| RNA polymerase beta' subunit protein (chloroplast) [Cornus florida]
          Length = 688

 Score =  311 bits (796), Expect = 7e-82
 Identities = 146/156 (93%), Positives = 150/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWA KILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWAKKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_004563995.1| RNA polymerase beta' chain [Olea woodiana subsp. woodiana]
           gi|334084650|emb|CBS29341.1| RNA polymerase beta' chain
           [Olea woodiana subsp. woodiana]
          Length = 690

 Score =  311 bits (796), Expect = 7e-82
 Identities = 146/156 (93%), Positives = 150/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGV FVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVAFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_008964858.1| RNA polymerase beta' subunit (chloroplast) [Schwalbea americana]
           gi|560176691|emb|CDJ38610.1| RNA polymerase beta'
           subunit (chloroplast) [Schwalbea americana]
          Length = 685

 Score =  310 bits (795), Expect = 1e-81
 Identities = 146/156 (93%), Positives = 150/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+GLVSPQQI+AWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGLVSPQQINAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGV FVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVGFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_009144618.1| RNA polymerase beta' subunit (chloroplast) [Scutellaria
           baicalensis] gi|827345831|gb|AKJ77132.1| RNA polymerase
           beta' subunit (chloroplast) [Scutellaria baicalensis]
          Length = 691

 Score =  310 bits (794), Expect = 1e-81
 Identities = 145/152 (95%), Positives = 149/152 (98%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MN NF SMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNPNFYSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 219
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arabidopsis lyrata subsp.
            lyrata] gi|297332704|gb|EFH63122.1| hypothetical protein
            ARALYDRAFT_893971 [Arabidopsis lyrata subsp. lyrata]
          Length = 1763

 Score =  310 bits (794), Expect = 1e-81
 Identities = 153/186 (82%), Positives = 159/186 (85%), Gaps = 7/186 (3%)
 Frame = -2

Query: 758  TTIFGS-------GTESFPCI*EELPD*QEGSLIEMNQNFSSMIDRYKHQQLRVGLVSPQ 600
            TTI G          ESF  +  EL    EGSLI MN   S MIDRYKHQQLR+GLVSPQ
Sbjct: 1024 TTIIGGTIPKPEDAPESFRLLVRELRS-LEGSLIGMNHKISYMIDRYKHQQLRIGLVSPQ 1082

Query: 599  QISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKDGLFFERIFGPIKSGICACGNYRVIG 420
            QISAWATKI+PNGE+VGEVTKPYTFHYK+NKPEKDGLF ERIFGPIKSGICACGNYRVIG
Sbjct: 1083 QISAWATKIIPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIG 1142

Query: 419  EEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPATHVWYLKRLPSYIANLLDKPLKELE 240
            +EKEDPKFCEQCGVEFVDSRIRRYQMGYIKL CP THVWYLKRLPSYIANLLDKPLKELE
Sbjct: 1143 DEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLTCPVTHVWYLKRLPSYIANLLDKPLKELE 1202

Query: 239  GLVYCD 222
            GLVYCD
Sbjct: 1203 GLVYCD 1208



 Score =  248 bits (632), Expect = 8e-63
 Identities = 125/136 (91%), Positives = 128/136 (94%), Gaps = 3/136 (2%)
 Frame = -3

Query: 1126 GKSRILDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGG 947
            GKSRI DGRTGDPFEQPVIIGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGR+KQGG
Sbjct: 925  GKSRIFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRSKQGG 984

Query: 946  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTILKPEDAPESFRLL 767
            QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTI KPEDAPESFRLL
Sbjct: 985  QRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPKPEDAPESFRLL 1044

Query: 766  VRELRSL---ALELNH 728
            VRELRSL    + +NH
Sbjct: 1045 VRELRSLEGSLIGMNH 1060


>gb|ADD31162.1| RNA polymerase beta' subunit protein (chloroplast) [Aucuba
           japonica]
          Length = 687

 Score =  310 bits (793), Expect = 2e-81
 Identities = 145/156 (92%), Positives = 149/156 (95%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MNQNFSSMIDRYKHQQLR+G VSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNQNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG EKEDPKFCEQCGVEF+DSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGNEKEDPKFCEQCGVEFIDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>ref|YP_009049675.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|675895310|ref|YP_009049784.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667751749|gb|AIG89836.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667751947|gb|AIG90033.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752056|gb|AIG90142.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 152

 Score =  309 bits (792), Expect = 2e-81
 Identities = 144/152 (94%), Positives = 149/152 (98%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MN+NFSSMIDRYKHQQLR+G VSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNKNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 219
           THVWYLKRLPSYIANLLDKPLKELEGLVYCDV
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV 152


>ref|YP_008815928.1| RNA polymerase beta' subunit (chloroplast) [Lindenbergia
           philippensis] gi|557136854|emb|CDI43909.1| RNA
           polymerase beta' subunit (chloroplast) [Lindenbergia
           philippensis]
          Length = 682

 Score =  309 bits (792), Expect = 2e-81
 Identities = 145/156 (92%), Positives = 150/156 (96%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           M QNFSSMIDRYKHQQLR+GLVSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEK+
Sbjct: 1   MTQNFSSMIDRYKHQQLRIGLVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKE 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>dbj|BAE47988.1| RNA polymerase beta' subunit [Nicotiana tomentosiformis]
          Length = 688

 Score =  309 bits (791), Expect = 3e-81
 Identities = 145/156 (92%), Positives = 149/156 (95%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MN NFSSMIDRYKHQQLR+G VSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156


>emb|CAC88035.1| RNA polymerase beta I subunit [Atropa belladonna]
          Length = 688

 Score =  309 bits (791), Expect = 3e-81
 Identities = 145/156 (92%), Positives = 149/156 (95%)
 Frame = -2

Query: 674 MNQNFSSMIDRYKHQQLRVGLVSPQQISAWATKILPNGEMVGEVTKPYTFHYKSNKPEKD 495
           MN NFSSMIDRYKHQQLR+G VSPQQISAWATKILPNGE+VGEVTKPYTFHYK+NKPEKD
Sbjct: 1   MNNNFSSMIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKD 60

Query: 494 GLFFERIFGPIKSGICACGNYRVIGEEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPA 315
           GLF ERIFGPIKSGICACGNYRVIG+EKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACP 
Sbjct: 61  GLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPV 120

Query: 314 THVWYLKRLPSYIANLLDKPLKELEGLVYCDV*FDR 207
           THVWYLKRLPSYIANLLDKPLKELEGLVYCD  F R
Sbjct: 121 THVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFAR 156