BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00012457
         (1824 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...   266   3e-68
ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix ...   265   1e-67
ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X...   261   1e-66
ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X...   261   1e-66
ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X...   261   1e-66
ref|XP_007031409.1| DNA-repair protein UVH3, putative isoform 3 ...   251   1e-63
ref|XP_007031408.1| DNA-repair protein UVH3, putative isoform 2,...   251   1e-63
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...   251   1e-63
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...   244   1e-61
ref|XP_008230638.1| PREDICTED: DNA repair protein UVH3 isoform X...   244   2e-61
ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X...   244   2e-61
ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   229   7e-57
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   229   7e-57
ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha...   222   9e-55
emb|CDP02141.1| unnamed protein product [Coffea canephora]            209   6e-51
ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X...   209   8e-51
ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X...   209   8e-51
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...   202   9e-49
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...   202   9e-49
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...   202   9e-49

>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score =  266 bits (681), Expect = 3e-68
 Identities = 217/623 (34%), Positives = 309/623 (49%), Gaps = 16/623 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXX 1644
            +LTS GVE++ +  H       ++N  S +    S     V+E   +F  DVETY DE  
Sbjct: 332  MLTSRGVEKSRNVDHHALDKPMTSNPASQSK---SATEVSVSELIREFGPDVETYCDERG 388

Query: 1643 XXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENT-----PTNAEAIRKSILGSPMAT 1479
                      G+ MTRDLQRNLD                   PTNA+ +      S   +
Sbjct: 389  RVRVSRVRGLGLRMTRDLQRNLDLMKEYEQEKVWGQICKDPEPTNAKEVPNV---SKSLS 445

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISF-EDDSGFHA 1302
            ENS  L     +E    +   +     ++GEN H  E+ IL  K A+EISF EDDSG   
Sbjct: 446  ENSLTLNARISNEKTGENTSTKNGALILEGENHHFDESPILGNKNAIEISFLEDDSGMK- 504

Query: 1301 TDEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQ 1122
             D DD LF HLV+GS  S++   S    + +S+   +C  E+GM+  NS S     +++Q
Sbjct: 505  -DIDDNLFLHLVSGSPTSKFDQSSH-PDRSTSESELECIWEEGMVEGNSGSQKSGHKESQ 562

Query: 1121 PSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDF 942
                  N++ E EVDWE+GVC VP  ASP   +  + VS G LEEEADIQEAIRRSL+DF
Sbjct: 563  SFLAERNSNVEDEVDWEDGVCHVPKVASPKQAKPEKAVSIGLLEEEADIQEAIRRSLDDF 622

Query: 941  TAEKSVPMCSETEEADLAAVGRS---GLENRSGFSLEVPVLEKDMSVSSNMPLNDVL-HS 774
              +KS  M SE +    ++  RS    L N S  S  +          +N+PL   +  S
Sbjct: 623  EKQKSSIMTSENQILGESSEDRSFARSLFNNSTLSKSIG--------DTNVPLESHIGRS 674

Query: 773  EALCMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDG 594
              LC TV    + +       L++ DS +KH  P T + V+     +   +   +  E G
Sbjct: 675  LPLCATVAEHGQHDNA---GVLRMTDSGKKHLSPSTSSGVEVDR--KSSVMNDSKDDESG 729

Query: 593  Y-VCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATF---GEYTHGSAKISSHAS 426
              +C   +      +  L ++K    + CLD S   + E +     E+   S  IS + S
Sbjct: 730  RTLCQINAPSAEPVDDHLSQIK----QCCLDTSEVAKNECSLISTNEFAETSYDISVNTS 785

Query: 425  DAVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQ--ELVKD 252
                +    VL  AH ++  A+ S LS    N +   Q+ + +++  +N  ++  +++  
Sbjct: 786  SVPDA----VLSAAHHDDCAASQSSLSFGNGNNDVYSQKSSLVEEAVDNDGEEPEQVIAQ 841

Query: 251  QTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAE 72
             ++   PD     R +       +  +E  EA+LD+E+ LLRQE  DLG+EQRKLERNAE
Sbjct: 842  NSI---PDS---VRGKTTIQEYPDDHMELFEANLDDEISLLRQECFDLGNEQRKLERNAE 895

Query: 71   SVSSEMFAECQELLQMFGLPYII 3
            +VSSEMFAECQELLQMFGLPYII
Sbjct: 896  TVSSEMFAECQELLQMFGLPYII 918


>ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix dactylifera]
          Length = 1467

 Score =  265 bits (676), Expect = 1e-67
 Identities = 212/617 (34%), Positives = 302/617 (48%), Gaps = 10/617 (1%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEXX 1644
            +LTS GVE++G+  H        +N  S +    S     V+E   DF  DVETY DE  
Sbjct: 329  MLTSRGVEKSGNVDHHALEKPMISNPASQSK---SATDVSVSELIRDFGPDVETYCDERG 385

Query: 1643 XXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENT-----PTNAEAIRKSILGSPMAT 1479
                      G+HMTRDLQRNLD             +     PTNA+ +      S   +
Sbjct: 386  HVRVSRVRGLGMHMTRDLQRNLDLMKEYEQEKVWGGSCKDPEPTNAKEVPNV---SKSLS 442

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISF-EDDSGFHA 1302
            ENS  L     +E +  +   +     ++ EN    E+ IL  K A+EISF EDDSG   
Sbjct: 443  ENSLTLSACISNERNGETTSTKNGALILEDENHRFHESPILGNKNAIEISFSEDDSGMK- 501

Query: 1301 TDEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQ 1122
             D DD LF HLV+GS  ++    +    + + +  S+C  E+GM+  N+ S     +++Q
Sbjct: 502  -DIDDNLFHHLVSGSPTAKLFDRNSHPDRSTCESESECIWEEGMVEGNAGSQKSGHKESQ 560

Query: 1121 PSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDF 942
                  N+ +E EVDWE+GVC VP  ASP   +  ++VS G LEEEAD+QEAIRRSLEDF
Sbjct: 561  SFLAERNSYEEDEVDWEDGVCHVPRVASPRQAKPEKSVSIGLLEEEADMQEAIRRSLEDF 620

Query: 941  TAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPL-NDVLHSEAL 765
               KS  M SE +      +G+S  +     SL         S  +N+ L + +  S  L
Sbjct: 621  EKRKSSIMTSENQ-----ILGKSSEDRGFVGSLFNNSTLSKSSRDTNVHLESHIGRSLPL 675

Query: 764  CMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVC 585
              T+D   + +   ++D LQ+ DS +KH  P T + VD       +     +        
Sbjct: 676  SATMDEHGQHDNASRQDVLQMTDSGKKHLSPSTSSGVDVDRKSSPMNDSKDDESGRALYQ 735

Query: 584  LETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKE---ATFGEYTHGSAKISSHASDAVA 414
            +     E      L ++    ++ CLD S   + E    +  E+   S  IS++ S    
Sbjct: 736  INVPSAEPVDG-HLGQI----EQCCLDTSEVAKNEHNLISTNEFAETSYDISANTSSVPD 790

Query: 413  SDLTDVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQTLGMP 234
            +    VL  AH ++  A+ S L+    N +   Q+ + +++  +N  K+     +   +P
Sbjct: 791  A----VLSAAHHDDRAASQSSLAFGKGNNDEYSQKSSLVEEAVDNNGKEPEQVTEKNSIP 846

Query: 233  PDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESVSSEM 54
              +  + +  I    N    L   EA LD E+ LLRQE  DLG+EQRKLERNAE+VSSEM
Sbjct: 847  --DSVRVKTTIQECPNDHTDL--FEAHLDNEISLLRQECFDLGNEQRKLERNAETVSSEM 902

Query: 53   FAECQELLQMFGLPYII 3
            FAECQELLQMFGLPYII
Sbjct: 903  FAECQELLQMFGLPYII 919


>ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Nelumbo nucifera]
          Length = 1430

 Score =  261 bits (668), Expect = 1e-66
 Identities = 227/632 (35%), Positives = 299/632 (47%), Gaps = 25/632 (3%)
 Frame = -2

Query: 1823 ILTSAGVERNG-----DTQHQVPATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETY 1659
            +LTSAGV + G      T     +   S NC SS A  +S +G+ V ++   F+ DVETY
Sbjct: 173  MLTSAGVNQTGGGLENQTVGNGSSFLNSVNC-SSAAHCNSAMGSAVGDSERGFEDDVETY 231

Query: 1658 TDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMAT 1479
             DE            GI MTRDLQRNLD           E     +++I   +L     T
Sbjct: 232  LDERGCVRVSRLRAMGIRMTRDLQRNLDLMKEIEQEKMREKNFAKSDSIVNEVLRIQENT 291

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDD-SGFHA 1302
              +++     G+  +  + +    G   QG+N HL E SIL     M ISFEDD    HA
Sbjct: 292  VKNNQ----HGEASNVGNNLIGEKGILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHA 347

Query: 1301 TD-EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDV-ED 1128
             D  DD +FA LV G S+    +    S K   D  S CS E+G +         DV + 
Sbjct: 348  GDANDDDVFARLVVGDSVMIPYTAITSSEKQPCDVDSDCSWEEGNVK--------DVNKG 399

Query: 1127 NQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLE 948
            +   F   N +D+ E+DWE GVC+ P + SP PTE+ +TVS+G LEE A+IQEAI+R+LE
Sbjct: 400  SHECFSESNINDDSELDWE-GVCNYPENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLE 458

Query: 947  DFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEA 768
            DF  EK   M     E           +    F  +V  L KD   S  +PL        
Sbjct: 459  DFRKEKPTGMHPANIEITTQ-------DTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQ 511

Query: 767  LCMTVDG-VKRLETVVQKDTLQINDSP------EKHSGPFTETRVDTKD-----GYQDLT 624
                  G  ++L  VV KD    ND+P          G   E    T +     G Q L+
Sbjct: 512  SSYGAAGEFEKLNNVVSKDVPPSNDTPMGQLSSSMALGETNEKETLTDELYLVPGLQSLS 571

Query: 623  LGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAK 444
                E  E     LE S++   + ++  E+     +K  D  +     A+  E   GS++
Sbjct: 572  ---QEESEKRRFSLEKSNIGPVSPIEPKEIHLASDKK-FDAFDDGGALASVTEAMDGSSR 627

Query: 443  ISSHASDAVASDLT----DVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNV 276
              SH S   A++L     D LV A  +  E  P   SS   NEN   +E   +++  N+V
Sbjct: 628  DDSHVS---ATELXVMPDDSLVGAAQH--ECGPVPCSSHEVNENIIPREEISVEKMENDV 682

Query: 275  S-KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDE 99
              K   V D+      D    YRD+     N+E  +E S A LD+EM  L QERM LG+E
Sbjct: 683  EIKNNPVTDEKYDAFSDGRTPYRDKSVIEDNMEVHIEASRAILDDEMQTLSQERMHLGEE 742

Query: 98   QRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            QRKLERNAESVS EMFAECQELLQMFGLPYII
Sbjct: 743  QRKLERNAESVSGEMFAECQELLQMFGLPYII 774


>ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nelumbo nucifera]
          Length = 1264

 Score =  261 bits (668), Expect = 1e-66
 Identities = 227/632 (35%), Positives = 299/632 (47%), Gaps = 25/632 (3%)
 Frame = -2

Query: 1823 ILTSAGVERNG-----DTQHQVPATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETY 1659
            +LTSAGV + G      T     +   S NC SS A  +S +G+ V ++   F+ DVETY
Sbjct: 7    MLTSAGVNQTGGGLENQTVGNGSSFLNSVNC-SSAAHCNSAMGSAVGDSERGFEDDVETY 65

Query: 1658 TDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMAT 1479
             DE            GI MTRDLQRNLD           E     +++I   +L     T
Sbjct: 66   LDERGCVRVSRLRAMGIRMTRDLQRNLDLMKEIEQEKMREKNFAKSDSIVNEVLRIQENT 125

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDD-SGFHA 1302
              +++     G+  +  + +    G   QG+N HL E SIL     M ISFEDD    HA
Sbjct: 126  VKNNQ----HGEASNVGNNLIGEKGILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHA 181

Query: 1301 TD-EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDV-ED 1128
             D  DD +FA LV G S+    +    S K   D  S CS E+G +         DV + 
Sbjct: 182  GDANDDDVFARLVVGDSVMIPYTAITSSEKQPCDVDSDCSWEEGNVK--------DVNKG 233

Query: 1127 NQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLE 948
            +   F   N +D+ E+DWE GVC+ P + SP PTE+ +TVS+G LEE A+IQEAI+R+LE
Sbjct: 234  SHECFSESNINDDSELDWE-GVCNYPENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLE 292

Query: 947  DFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEA 768
            DF  EK   M     E           +    F  +V  L KD   S  +PL        
Sbjct: 293  DFRKEKPTGMHPANIEITTQ-------DTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQ 345

Query: 767  LCMTVDG-VKRLETVVQKDTLQINDSP------EKHSGPFTETRVDTKD-----GYQDLT 624
                  G  ++L  VV KD    ND+P          G   E    T +     G Q L+
Sbjct: 346  SSYGAAGEFEKLNNVVSKDVPPSNDTPMGQLSSSMALGETNEKETLTDELYLVPGLQSLS 405

Query: 623  LGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAK 444
                E  E     LE S++   + ++  E+     +K  D  +     A+  E   GS++
Sbjct: 406  ---QEESEKRRFSLEKSNIGPVSPIEPKEIHLASDKK-FDAFDDGGALASVTEAMDGSSR 461

Query: 443  ISSHASDAVASDLT----DVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNV 276
              SH S   A++L     D LV A  +  E  P   SS   NEN   +E   +++  N+V
Sbjct: 462  DDSHVS---ATELXVMPDDSLVGAAQH--ECGPVPCSSHEVNENIIPREEISVEKMENDV 516

Query: 275  S-KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDE 99
              K   V D+      D    YRD+     N+E  +E S A LD+EM  L QERM LG+E
Sbjct: 517  EIKNNPVTDEKYDAFSDGRTPYRDKSVIEDNMEVHIEASRAILDDEMQTLSQERMHLGEE 576

Query: 98   QRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            QRKLERNAESVS EMFAECQELLQMFGLPYII
Sbjct: 577  QRKLERNAESVSGEMFAECQELLQMFGLPYII 608


>ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nelumbo nucifera]
          Length = 1571

 Score =  261 bits (668), Expect = 1e-66
 Identities = 227/632 (35%), Positives = 299/632 (47%), Gaps = 25/632 (3%)
 Frame = -2

Query: 1823 ILTSAGVERNG-----DTQHQVPATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETY 1659
            +LTSAGV + G      T     +   S NC SS A  +S +G+ V ++   F+ DVETY
Sbjct: 314  MLTSAGVNQTGGGLENQTVGNGSSFLNSVNC-SSAAHCNSAMGSAVGDSERGFEDDVETY 372

Query: 1658 TDEXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMAT 1479
             DE            GI MTRDLQRNLD           E     +++I   +L     T
Sbjct: 373  LDERGCVRVSRLRAMGIRMTRDLQRNLDLMKEIEQEKMREKNFAKSDSIVNEVLRIQENT 432

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDD-SGFHA 1302
              +++     G+  +  + +    G   QG+N HL E SIL     M ISFEDD    HA
Sbjct: 433  VKNNQ----HGEASNVGNNLIGEKGILPQGDNHHLHEHSILGNGNTMVISFEDDVREEHA 488

Query: 1301 TD-EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDV-ED 1128
             D  DD +FA LV G S+    +    S K   D  S CS E+G +         DV + 
Sbjct: 489  GDANDDDVFARLVVGDSVMIPYTAITSSEKQPCDVDSDCSWEEGNVK--------DVNKG 540

Query: 1127 NQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLE 948
            +   F   N +D+ E+DWE GVC+ P + SP PTE+ +TVS+G LEE A+IQEAI+R+LE
Sbjct: 541  SHECFSESNINDDSELDWE-GVCNYPENVSPPPTENKKTVSKGCLEEAAEIQEAIKRNLE 599

Query: 947  DFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEA 768
            DF  EK   M     E           +    F  +V  L KD   S  +PL        
Sbjct: 600  DFRKEKPTGMHPANIEITTQ-------DTAFEFPAQVLDLVKDTVDSLKLPLESNNQQIQ 652

Query: 767  LCMTVDG-VKRLETVVQKDTLQINDSP------EKHSGPFTETRVDTKD-----GYQDLT 624
                  G  ++L  VV KD    ND+P          G   E    T +     G Q L+
Sbjct: 653  SSYGAAGEFEKLNNVVSKDVPPSNDTPMGQLSSSMALGETNEKETLTDELYLVPGLQSLS 712

Query: 623  LGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAK 444
                E  E     LE S++   + ++  E+     +K  D  +     A+  E   GS++
Sbjct: 713  ---QEESEKRRFSLEKSNIGPVSPIEPKEIHLASDKK-FDAFDDGGALASVTEAMDGSSR 768

Query: 443  ISSHASDAVASDLT----DVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNV 276
              SH S   A++L     D LV A  +  E  P   SS   NEN   +E   +++  N+V
Sbjct: 769  DDSHVS---ATELXVMPDDSLVGAAQH--ECGPVPCSSHEVNENIIPREEISVEKMENDV 823

Query: 275  S-KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDE 99
              K   V D+      D    YRD+     N+E  +E S A LD+EM  L QERM LG+E
Sbjct: 824  EIKNNPVTDEKYDAFSDGRTPYRDKSVIEDNMEVHIEASRAILDDEMQTLSQERMHLGEE 883

Query: 98   QRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            QRKLERNAESVS EMFAECQELLQMFGLPYII
Sbjct: 884  QRKLERNAESVSGEMFAECQELLQMFGLPYII 915


>ref|XP_007031409.1| DNA-repair protein UVH3, putative isoform 3 [Theobroma cacao]
            gi|508710438|gb|EOY02335.1| DNA-repair protein UVH3,
            putative isoform 3 [Theobroma cacao]
          Length = 1215

 Score =  251 bits (641), Expect = 1e-63
 Identities = 211/644 (32%), Positives = 298/644 (46%), Gaps = 37/644 (5%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +LTSA  ER+ D Q ++ +   S   N + S  + + V  +  NE  +  D+DV TY DE
Sbjct: 407  VLTSARKERDEDKQQEIHSNHPSGFLNSVKSICKSNVVTESVPNEPTSAPDEDVGTYLDE 466

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMATE 1476
                        GI MTRDLQRNLD            N   N +++  R  I  S  ++ 
Sbjct: 467  RGQVRVSRVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVPDRNRIGTSKNSSS 526

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATD 1296
             +  L+ S     + ++L             +   + S    +  MEI+FEDD      D
Sbjct: 527  ENQFLKTSHDGNCESVNL-------------NESNQQSAFKTEACMEITFEDDGRNKFFD 573

Query: 1295 EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVE-DNQP 1119
            +DD +FA L AG  ++  S E+  SGKH+SD  S C  E+GM   N    +  ++  N P
Sbjct: 574  DDDDIFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNNP 633

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
            S+   N SDE EV+WEE   D P S+S GP E    +S+G LEEEAD+QEAIRRSL D  
Sbjct: 634  SYKESNISDESEVEWEEEPSDAPKSSS-GPVESGVMLSKGYLEEEADLQEAIRRSLTDIG 692

Query: 938  AEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCM 759
            A+KS    SE E+     + + G     GF         D        +N    S   C 
Sbjct: 693  AKKSNYFPSEFEK-----LKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKS---CQ 744

Query: 758  TVDGVKRLETVVQKDTLQINDSPEKHS---------------------GPFTETRVDTKD 642
             +D V++L +V +    + ++ PE+ S                     GP +E   D   
Sbjct: 745  NLDRVQKLYSVDELSISEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSEQSRDIAS 804

Query: 641  GYQDLTLGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEK-----------CLDKSN 495
                 TL     +  G     ++ V+G + +     K + +              +DK N
Sbjct: 805  TVLVTTLEREVHLAPGKQSNASNEVDGLSTVSNSWSKDSSRSLDVVLDDLPGAILVDKKN 864

Query: 494  QQEKEATFGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNF 315
              E E +          + S     V ++L  ++ D   N+ EA     S EI + +   
Sbjct: 865  DSEGEPS---------TLVSEKKSEVETELCSMVEDKK-NDLEAKSLHQSIEIVDSSIPV 914

Query: 314  QEGAYIDQTTNNVSKQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEML 135
             + +    T++   +QELV D+T     +E  Q  D     GN    +E ++ SLDEE+L
Sbjct: 915  VQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEELL 974

Query: 134  LLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            +L QE M+LGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 975  ILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 1018


>ref|XP_007031408.1| DNA-repair protein UVH3, putative isoform 2, partial [Theobroma
            cacao] gi|508710437|gb|EOY02334.1| DNA-repair protein
            UVH3, putative isoform 2, partial [Theobroma cacao]
          Length = 1239

 Score =  251 bits (641), Expect = 1e-63
 Identities = 211/644 (32%), Positives = 298/644 (46%), Gaps = 37/644 (5%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +LTSA  ER+ D Q ++ +   S   N + S  + + V  +  NE  +  D+DV TY DE
Sbjct: 182  VLTSARKERDEDKQQEIHSNHPSGFLNSVKSICKSNVVTESVPNEPTSAPDEDVGTYLDE 241

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMATE 1476
                        GI MTRDLQRNLD            N   N +++  R  I  S  ++ 
Sbjct: 242  RGQVRVSRVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVPDRNRIGTSKNSSS 301

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATD 1296
             +  L+ S     + ++L             +   + S    +  MEI+FEDD      D
Sbjct: 302  ENQFLKTSHDGNCESVNL-------------NESNQQSAFKTEACMEITFEDDGRNKFFD 348

Query: 1295 EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVE-DNQP 1119
            +DD +FA L AG  ++  S E+  SGKH+SD  S C  E+GM   N    +  ++  N P
Sbjct: 349  DDDDIFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNNP 408

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
            S+   N SDE EV+WEE   D P S+S GP E    +S+G LEEEAD+QEAIRRSL D  
Sbjct: 409  SYKESNISDESEVEWEEEPSDAPKSSS-GPVESGVMLSKGYLEEEADLQEAIRRSLTDIG 467

Query: 938  AEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCM 759
            A+KS    SE E+     + + G     GF         D        +N    S   C 
Sbjct: 468  AKKSNYFPSEFEK-----LKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKS---CQ 519

Query: 758  TVDGVKRLETVVQKDTLQINDSPEKHS---------------------GPFTETRVDTKD 642
             +D V++L +V +    + ++ PE+ S                     GP +E   D   
Sbjct: 520  NLDRVQKLYSVDELSISEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSEQSRDIAS 579

Query: 641  GYQDLTLGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEK-----------CLDKSN 495
                 TL     +  G     ++ V+G + +     K + +              +DK N
Sbjct: 580  TVLVTTLEREVHLAPGKQSNASNEVDGLSTVSNSWSKDSSRSLDVVLDDLPGAILVDKKN 639

Query: 494  QQEKEATFGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNF 315
              E E +          + S     V ++L  ++ D   N+ EA     S EI + +   
Sbjct: 640  DSEGEPS---------TLVSEKKSEVETELCSMVEDKK-NDLEAKSLHQSIEIVDSSIPV 689

Query: 314  QEGAYIDQTTNNVSKQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEML 135
             + +    T++   +QELV D+T     +E  Q  D     GN    +E ++ SLDEE+L
Sbjct: 690  VQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEELL 749

Query: 134  LLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            +L QE M+LGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 750  ILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 793


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  251 bits (641), Expect = 1e-63
 Identities = 211/644 (32%), Positives = 298/644 (46%), Gaps = 37/644 (5%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +LTSA  ER+ D Q ++ +   S   N + S  + + V  +  NE  +  D+DV TY DE
Sbjct: 407  VLTSARKERDEDKQQEIHSNHPSGFLNSVKSICKSNVVTESVPNEPTSAPDEDVGTYLDE 466

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMATE 1476
                        GI MTRDLQRNLD            N   N +++  R  I  S  ++ 
Sbjct: 467  RGQVRVSRVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVPDRNRIGTSKNSSS 526

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATD 1296
             +  L+ S     + ++L             +   + S    +  MEI+FEDD      D
Sbjct: 527  ENQFLKTSHDGNCESVNL-------------NESNQQSAFKTEACMEITFEDDGRNKFFD 573

Query: 1295 EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVE-DNQP 1119
            +DD +FA L AG  ++  S E+  SGKH+SD  S C  E+GM   N    +  ++  N P
Sbjct: 574  DDDDIFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNNP 633

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
            S+   N SDE EV+WEE   D P S+S GP E    +S+G LEEEAD+QEAIRRSL D  
Sbjct: 634  SYKESNISDESEVEWEEEPSDAPKSSS-GPVESGVMLSKGYLEEEADLQEAIRRSLTDIG 692

Query: 938  AEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCM 759
            A+KS    SE E+     + + G     GF         D        +N    S   C 
Sbjct: 693  AKKSNYFPSEFEK-----LKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKS---CQ 744

Query: 758  TVDGVKRLETVVQKDTLQINDSPEKHS---------------------GPFTETRVDTKD 642
             +D V++L +V +    + ++ PE+ S                     GP +E   D   
Sbjct: 745  NLDRVQKLYSVDELSISEASNFPERLSPIAHSSDRNGTLSYKPCERSDGPHSEQSRDIAS 804

Query: 641  GYQDLTLGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEK-----------CLDKSN 495
                 TL     +  G     ++ V+G + +     K + +              +DK N
Sbjct: 805  TVLVTTLEREVHLAPGKQSNASNEVDGLSTVSNSWSKDSSRSLDVVLDDLPGAILVDKKN 864

Query: 494  QQEKEATFGEYTHGSAKISSHASDAVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNF 315
              E E +          + S     V ++L  ++ D   N+ EA     S EI + +   
Sbjct: 865  DSEGEPS---------TLVSEKKSEVETELCSMVEDKK-NDLEAKSLHQSIEIVDSSIPV 914

Query: 314  QEGAYIDQTTNNVSKQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEML 135
             + +    T++   +QELV D+T     +E  Q  D     GN    +E ++ SLDEE+L
Sbjct: 915  VQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEELL 974

Query: 134  LLRQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
            +L QE M+LGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 975  ILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 1018


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score =  244 bits (624), Expect = 1e-61
 Identities = 212/642 (33%), Positives = 310/642 (48%), Gaps = 35/642 (5%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPA---TSESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTD 1653
            +LTS GV+RNG+ Q Q P    T +S NC++ST++ ++V G+  +E R  FD+DVETY D
Sbjct: 383  LLTSTGVQRNGNKQQQAPTMNPTFDSMNCVTSTSKSNAVSGSVQDEPRRVFDEDVETYLD 442

Query: 1652 EXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXE--NTPTNAEAIRKSILGSPMAT 1479
            E            G+ MTRDLQRNLD                P+ +E  R  I GSP + 
Sbjct: 443  ENGRIRVSRVRAMGMRMTRDLQRNLDLMKEIEQERTHAIETAPSQSELTRDKI-GSPKSF 501

Query: 1478 ENSH-RLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHA 1302
             +    +E S     D + L  R              + S+L  + +++ISFE D     
Sbjct: 502  PSKKLHVESSHDKHSDSVKLNER-------------NQQSMLNDEGSIQISFEADGRSKC 548

Query: 1301 TDEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGR--NSSSFSIDVED 1128
             D DD +F  LVAG  ++  S +++ S   +SD AS    E+G +    NSSS ++ +E 
Sbjct: 549  LDSDDDVFTSLVAGQPVNIPSVDNITSRIQTSDSASDGDWEEGTIETRGNSSSNNLALET 608

Query: 1127 NQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLE 948
            N P     N SD+ EV+WE+G  D   S+ P  +E     SRG +EEEAD+QEAIRRSLE
Sbjct: 609  NPP-LKEKNISDDSEVEWEDGGGDHENSSFP--SESKMPASRGYMEEEADLQEAIRRSLE 665

Query: 947  DFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEA 768
            D   E      SE E+  ++      +    GF     + ++D +    +P  DV   + 
Sbjct: 666  DLGGEIFNNTLSEHEKLKISD---KNVYKDVGF-----LDQEDNTGGLILPEKDVTQQDQ 717

Query: 767  LCMTVDGVKRLETVVQKDTLQINDSP------EKH--------SGPFTETRVDTKDGYQD 630
                +    +++ V Q D  Q+  S       E H        +    E  + + DG   
Sbjct: 718  PFSEISATGKIDKVGQYDISQVFSSQSQLAFSEAHDPDNMDILTNKLYERDMGSNDGQPS 777

Query: 629  LTLGHHEVIEDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKE-ATFGEYTHG 453
              L       +G VC   S  E    L+   +      K   ++N ++   +T  +   G
Sbjct: 778  RALNM-----EGSVCRGMSSAESAAPLETHVIL-----KQFSETNVEDMGLSTSTKMRSG 827

Query: 452  SAKISSHASDAVASDLTDVLVDAHTNNSEAAPSLLSSE------------ITNENFNFQE 309
             + IS  A   V+   +   +D   N  EA PS+L +E            ITN + +  E
Sbjct: 828  ISNISKAAWSNVSFASS---IDDDRNKVEAEPSVLVNEEKRPETYCQSVKITNPSTSVME 884

Query: 308  GAYIDQTTNNVSKQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLL 129
             + I+       + +L  ++  G   +E  Q  +++ S+ N+ +    SE +L EE+L+L
Sbjct: 885  PS-INLAIGTDVESKLAGEKNSGHLFNEKKQDMEKVVSNENLREDF--SEVTLQEEILIL 941

Query: 128  RQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
             QERM+LG EQ+KLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 942  GQERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYII 983


>ref|XP_008230638.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Prunus mume]
          Length = 1480

 Score =  244 bits (622), Expect = 2e-61
 Identities = 208/621 (33%), Positives = 296/621 (47%), Gaps = 14/621 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPAT--SESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +L SA  ++NGD Q Q P    S S N + ST   ++V G   +E+ + FD ++ETY DE
Sbjct: 431  VLASARADKNGDKQ-QAPKEHPSNSRNSVPST---NNVTGATPDESTSVFDDNIETYLDE 486

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMATE 1476
                        GI MTRDLQRNLD            N   N   +   + I  S  +  
Sbjct: 487  RGHLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKTNTNKIINTRDMLNERDIDISKSSFS 546

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQ-------GENSHLQETS--ILAGKTAMEISFE 1323
            N   +E S GD  D I      + P  +       G+NS     +   L  +T +EIS E
Sbjct: 547  NRKVIETSCGDNGDSIDTGVLRSHPDQKKVLESSIGDNSLNDRNNQCTLKLETPIEISIE 606

Query: 1322 DDSGFHATDEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFS 1143
            D     + D DD LFA LVAG++++  +++  +  K SS   S C  E+G         +
Sbjct: 607  DGGESKSFDGDDDLFASLVAGNAVTTNAND--ILRKQSSGSDSDCDWEEG---------T 655

Query: 1142 IDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAI 963
            ++V+   P  V GN SD+ EV+WEEGVC +  + S  P E  ETVS+G  EEEA+ QEAI
Sbjct: 656  VEVKSKVPR-VEGNMSDDSEVEWEEGVCGITENTSSFPRECGETVSKGYFEEEANFQEAI 714

Query: 962  RRSLEDFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDV 783
            RRSLED    K     S  E+  L   G    +       E  ++E  +        N  
Sbjct: 715  RRSLEDIGDVKCAYASSAEEK--LQCFGGEAYKGADFIDRETKIVEAVLVGKIGKRQN-- 770

Query: 782  LHSEALCMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVI 603
               E+ C  VDGVK++++V   D+            P  +T  +  +          E  
Sbjct: 771  ---ESSCDIVDGVKKMKSVTDLDS------------PPAQTMQNVSE---------RENF 806

Query: 602  EDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASD 423
              G  C E+    GT  + ++       E+ L   N+ +  +T         K  +H+ D
Sbjct: 807  CGGMQCAESVTPSGTKEVHMIT------EQVLGTFNEDDSLSTLPNTLE---KNKAHSFD 857

Query: 422  AVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQEL-VKDQT 246
            A++ D TD  VD   N  EA PS    E+ N       G+   + TN+    +  VK+++
Sbjct: 858  ALSCDATD-WVDDQKNEIEAEPSCHIVEMANPAA--LTGSLTGKLTNDCDVDKTWVKEKS 914

Query: 245  LGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESV 66
                  E     D+ + + +   ++E +EA+L+EEML+L QE M+LGDEQR+LERN ESV
Sbjct: 915  HDNFFQESEHSWDKSSLNSDANARVEATEANLEEEMLILGQECMNLGDEQRRLERNVESV 974

Query: 65   SSEMFAECQELLQMFGLPYII 3
            SSEMF ECQELLQMFG+PYII
Sbjct: 975  SSEMFTECQELLQMFGIPYII 995


>ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Prunus mume]
          Length = 1681

 Score =  244 bits (622), Expect = 2e-61
 Identities = 208/621 (33%), Positives = 296/621 (47%), Gaps = 14/621 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPAT--SESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +L SA  ++NGD Q Q P    S S N + ST   ++V G   +E+ + FD ++ETY DE
Sbjct: 431  VLASARADKNGDKQ-QAPKEHPSNSRNSVPST---NNVTGATPDESTSVFDDNIETYLDE 486

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAI--RKSILGSPMATE 1476
                        GI MTRDLQRNLD            N   N   +   + I  S  +  
Sbjct: 487  RGHLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKTNTNKIINTRDMLNERDIDISKSSFS 546

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQ-------GENSHLQETS--ILAGKTAMEISFE 1323
            N   +E S GD  D I      + P  +       G+NS     +   L  +T +EIS E
Sbjct: 547  NRKVIETSCGDNGDSIDTGVLRSHPDQKKVLESSIGDNSLNDRNNQCTLKLETPIEISIE 606

Query: 1322 DDSGFHATDEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFS 1143
            D     + D DD LFA LVAG++++  +++  +  K SS   S C  E+G         +
Sbjct: 607  DGGESKSFDGDDDLFASLVAGNAVTTNAND--ILRKQSSGSDSDCDWEEG---------T 655

Query: 1142 IDVEDNQPSFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAI 963
            ++V+   P  V GN SD+ EV+WEEGVC +  + S  P E  ETVS+G  EEEA+ QEAI
Sbjct: 656  VEVKSKVPR-VEGNMSDDSEVEWEEGVCGITENTSSFPRECGETVSKGYFEEEANFQEAI 714

Query: 962  RRSLEDFTAEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDV 783
            RRSLED    K     S  E+  L   G    +       E  ++E  +        N  
Sbjct: 715  RRSLEDIGDVKCAYASSAEEK--LQCFGGEAYKGADFIDRETKIVEAVLVGKIGKRQN-- 770

Query: 782  LHSEALCMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVI 603
               E+ C  VDGVK++++V   D+            P  +T  +  +          E  
Sbjct: 771  ---ESSCDIVDGVKKMKSVTDLDS------------PPAQTMQNVSE---------RENF 806

Query: 602  EDGYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASD 423
              G  C E+    GT  + ++       E+ L   N+ +  +T         K  +H+ D
Sbjct: 807  CGGMQCAESVTPSGTKEVHMIT------EQVLGTFNEDDSLSTLPNTLE---KNKAHSFD 857

Query: 422  AVASDLTDVLVDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQEL-VKDQT 246
            A++ D TD  VD   N  EA PS    E+ N       G+   + TN+    +  VK+++
Sbjct: 858  ALSCDATD-WVDDQKNEIEAEPSCHIVEMANPAA--LTGSLTGKLTNDCDVDKTWVKEKS 914

Query: 245  LGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESV 66
                  E     D+ + + +   ++E +EA+L+EEML+L QE M+LGDEQR+LERN ESV
Sbjct: 915  HDNFFQESEHSWDKSSLNSDANARVEATEANLEEEMLILGQECMNLGDEQRRLERNVESV 974

Query: 65   SSEMFAECQELLQMFGLPYII 3
            SSEMF ECQELLQMFG+PYII
Sbjct: 975  SSEMFTECQELLQMFGIPYII 995


>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  229 bits (583), Expect = 7e-57
 Identities = 201/622 (32%), Positives = 291/622 (46%), Gaps = 16/622 (2%)
 Frame = -2

Query: 1820 LTSAGVERNGDTQHQVPATS--ESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEX 1647
            LT+ GVE+NGD Q+Q+P     +S N ++ST++ ++   +   E  + F+ DVETY DE 
Sbjct: 143  LTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVETYLDER 202

Query: 1646 XXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMATENSH 1467
                       GI MTRDLQRNLD                                    
Sbjct: 203  GRVRVSRVRAMGIRMTRDLQRNLDLMK--------------------------------- 229

Query: 1466 RLEVSAGDEDDE-ISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDED 1290
             +E    +ED+  I  + + N            E SI     ++EISFEDD   +  + D
Sbjct: 230  EIEQDRTNEDNNGIVTLNKTN------------EQSIPDNGASIEISFEDDGEHNCLNGD 277

Query: 1289 DGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVE-DNQPSF 1113
            D LFA LVAG+ +   SS++ LS +  +D AS    E+G++     S   +V  + +PS 
Sbjct: 278  DELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSV 337

Query: 1112 VNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTAE 933
            +    SD+ EV+WEEG CDV  + S  P++     S+G LEEE D+QEAIRRSLED   E
Sbjct: 338  MEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGE 397

Query: 932  KSVPMCSETEEADLAAVGRSGLENR-SGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCMT 756
            K+V      +++D+        E +   F  +    E+D  +  N+P      + + C  
Sbjct: 398  KAVG--ESFKDSDIKEYDEKVHEVKDDAFHKKNDKAEQDFPL-ENLP----EQNGSFCKI 450

Query: 755  VDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHH--EVIEDGYVCL 582
            VD V++L++V   +T Q  D+  +      E      +   +     +  +V E G V  
Sbjct: 451  VDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQKDVGESGNVGR 510

Query: 581  ETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASDLT 402
            ET+ V       + E  +   +K +D S       T      G     SH SDA+  ++ 
Sbjct: 511  ETNEV-----YMIREQLSHASKKSVDTS-------TLANSCSGD---GSHISDAMLGNMP 555

Query: 401  DVL-VDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTT--------NNVSKQELVKDQ 249
            D    D+   +SEAAP+  S+E T+      E     +T         NN     + K++
Sbjct: 556  DATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTAVEQKLAEGNNHVNFFMEKER 615

Query: 248  TLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAES 69
             +G    E      +    G  E  L        EEM++L QE ++LGDEQRKLERNA+ 
Sbjct: 616  NMGNSVTED----KKNVQFGVTEDVL--------EEMMILDQECLNLGDEQRKLERNADC 663

Query: 68   VSSEMFAECQELLQMFGLPYII 3
            VSSEMFAECQELLQMFGLPYII
Sbjct: 664  VSSEMFAECQELLQMFGLPYII 685


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  229 bits (583), Expect = 7e-57
 Identities = 201/622 (32%), Positives = 291/622 (46%), Gaps = 16/622 (2%)
 Frame = -2

Query: 1820 LTSAGVERNGDTQHQVPATS--ESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEX 1647
            LT+ GVE+NGD Q+Q+P     +S N ++ST++ ++   +   E  + F+ DVETY DE 
Sbjct: 313  LTNGGVEKNGDKQYQIPTECPPDSPNNVASTSKSNTAAESVAGEPASVFNDDVETYLDER 372

Query: 1646 XXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIRKSILGSPMATENSH 1467
                       GI MTRDLQRNLD                                    
Sbjct: 373  GRVRVSRVRAMGIRMTRDLQRNLDLMK--------------------------------- 399

Query: 1466 RLEVSAGDEDDE-ISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDED 1290
             +E    +ED+  I  + + N            E SI     ++EISFEDD   +  + D
Sbjct: 400  EIEQDRTNEDNNGIVTLNKTN------------EQSIPDNGASIEISFEDDGEHNCLNGD 447

Query: 1289 DGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVE-DNQPSF 1113
            D LFA LVAG+ +   SS++ LS +  +D AS    E+G++     S   +V  + +PS 
Sbjct: 448  DELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIEEKGGSCIDNVGVEIKPSV 507

Query: 1112 VNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTAE 933
            +    SD+ EV+WEEG CDV  + S  P++     S+G LEEE D+QEAIRRSLED   E
Sbjct: 508  MEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRLEEETDLQEAIRRSLEDLGGE 567

Query: 932  KSVPMCSETEEADLAAVGRSGLENR-SGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCMT 756
            K+V      +++D+        E +   F  +    E+D  +  N+P      + + C  
Sbjct: 568  KAVG--ESFKDSDIKEYDEKVHEVKDDAFHKKNDKAEQDFPL-ENLP----EQNGSFCKI 620

Query: 755  VDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHH--EVIEDGYVCL 582
            VD V++L++V   +T Q  D+  +      E      +   +     +  +V E G V  
Sbjct: 621  VDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVLNNELCEEYQKDVGESGNVGR 680

Query: 581  ETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASDLT 402
            ET+ V       + E  +   +K +D S       T      G     SH SDA+  ++ 
Sbjct: 681  ETNEV-----YMIREQLSHASKKSVDTS-------TLANSCSGD---GSHISDAMLGNMP 725

Query: 401  DVL-VDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTT--------NNVSKQELVKDQ 249
            D    D+   +SEAAP+  S+E T+      E     +T         NN     + K++
Sbjct: 726  DATPADSSKYDSEAAPTWHSNETTDPAIPPGETCIKGKTAVEQKLAEGNNHVNFFMEKER 785

Query: 248  TLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAES 69
             +G    E      +    G  E  L        EEM++L QE ++LGDEQRKLERNA+ 
Sbjct: 786  NMGNSVTED----KKNVQFGVTEDVL--------EEMMILDQECLNLGDEQRKLERNADC 833

Query: 68   VSSEMFAECQELLQMFGLPYII 3
            VSSEMFAECQELLQMFGLPYII
Sbjct: 834  VSSEMFAECQELLQMFGLPYII 855


>ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha curcas]
          Length = 1706

 Score =  222 bits (565), Expect = 9e-55
 Identities = 204/630 (32%), Positives = 297/630 (47%), Gaps = 23/630 (3%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVP---ATSESTNCISSTARFHSVIGTCVNEARNDFDKDVETYTD 1653
            +LTSAGV RNG+ Q Q     ++S+S   + ST++ ++V G   +E+R   D+DVETY D
Sbjct: 445  LLTSAGVYRNGNEQQQRSIGHSSSDSLAHVLSTSKSNTVTGLVPHESRQVIDEDVETYLD 504

Query: 1652 EXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEA-IRKSILGSPMATE 1476
            E            G+ MTRDLQRNLD            N   +A++ + +  +G P    
Sbjct: 505  ERGHIRVSRVRAMGMRMTRDLQRNLDLMKEIEHERTHANKNASAQSEVNRDNIGYPKRIP 564

Query: 1475 NSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATD 1296
            +  +   S+ D + +   +   N              SIL  K  +EISFE D    +  
Sbjct: 565  SKIQHVKSSNDNNGDSVKLNERNAE------------SILNNKGLLEISFEVDGESKSLG 612

Query: 1295 EDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQPS 1116
             DD +F  LVAG  ++  S ++    + SSD  S    E+G++    +++  ++E N P 
Sbjct: 613  SDDEIFTSLVAGKPVTISSVDNGTLRRESSDSVSDSDWEEGIIEVRGNNY--ELESNPPP 670

Query: 1115 FVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTA 936
                N   + EV+WEEGVCDV   + P  +E  +  S+G LEE+AD+QEAIRRSLEDF  
Sbjct: 671  -KGSNIGSDSEVEWEEGVCDVENFSLP--SESGKLASKGYLEEQADLQEAIRRSLEDFGD 727

Query: 935  EKSVPMCSETEEADLA---AVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEAL 765
            EK     SE E+   +   A    G  +    +    +LEKD +   N    ++L S  L
Sbjct: 728  EKFNHALSEHEKQTCSEENAFSGVGFLDSEDNTCRPILLEKDAN-QQNKHSPEILTSAKL 786

Query: 764  CMTVDGVKRLET--VVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIED-- 597
                D + +++   V      Q+  S E H  P   + +  K   +DL     +  +D  
Sbjct: 787  ----DSMDQIDVSHVFSSSGRQLKLS-EVHD-PDKMSILQIKSCVRDLGSNTAQSSQDAS 840

Query: 596  --GYVCLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYT--HGSAKISSHA 429
              G  C      E    LK  E   T  E   D   Q    +T    +  HGS      +
Sbjct: 841  IGGNFCRGMRSAESVAPLKAKEAHMT-VELSSDTLVQDVGLSTSSNISSAHGSHVCKPIS 899

Query: 428  SDAVASDLTDVL-------VDAHTNNSEAAPSLL-SSEITNENFNFQEGAYIDQTTNNVS 273
                 + LTD L       +    N  +    L+ S+EI N + +  E +  D       
Sbjct: 900  GKGAQNILTDDLGNKMEEEISMLVNEEQKTDPLVHSAEIANSSMSSMEPSK-DSAVGTDV 958

Query: 272  KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQR 93
            +  L  D+      +E     D+   + N+  Q + +EASL EE+ +L QER++LGDE +
Sbjct: 959  EPNLAGDKNSDNQFNENCM--DKFGRNENL--QADFAEASLQEEIFILGQERINLGDEWK 1014

Query: 92   KLERNAESVSSEMFAECQELLQMFGLPYII 3
            KLERNAESV+SEMFAECQELLQMFGLPYII
Sbjct: 1015 KLERNAESVNSEMFAECQELLQMFGLPYII 1044


>emb|CDP02141.1| unnamed protein product [Coffea canephora]
          Length = 1523

 Score =  209 bits (532), Expect = 6e-51
 Identities = 195/622 (31%), Positives = 289/622 (46%), Gaps = 15/622 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSEST---NCISSTARFHSVIGTCVNEARNDFDKDVETYTD 1653
            +LTS G       Q Q    + ST   N ++S  +  +V G+ V+E + +F+ DVETY D
Sbjct: 317  VLTSTGEGSKKSEQSQTAPVNPSTSAVNDVASKTKHTAVAGSTVDEPQRNFENDVETYLD 376

Query: 1652 EXXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIR-KSILGSPMA-T 1479
            E            GI MTRDLQRNLD                  E+    S++  P   +
Sbjct: 377  ERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIDGESVCMTKSAIEESTNCSSVVDIPYNFS 436

Query: 1478 ENSHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHAT 1299
            +    L     D           NG T   EN+   E SIL   T+MEISF+D+      
Sbjct: 437  KGIPNLATCCQDS----------NGMTCVDENN---EESILNAGTSMEISFDDNGQHELG 483

Query: 1298 DEDDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQP 1119
             EDD LFAHLVAG  +  +S    LS K S D  S+   E G +   + + +  ++  +P
Sbjct: 484  GEDDDLFAHLVAGDPVMEFSINDSLSKKQSLDSTSEPEWEDGDIEVEAGTSNNKLK-GKP 542

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
               +G   DE ++  E+G   +   AS    E+++ VS+G+LEEEAD++EAIRRSL+D  
Sbjct: 543  LLPDGMR-DENDLGCEDGSLGIQEEAS-FSGEYLDIVSKGALEEEADLKEAIRRSLQDLD 600

Query: 938  AEKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMP---LNDVLHSEA 768
             ++ V    E E+    A   S L   SGF      + K++    + P    N+  H E+
Sbjct: 601  DQRLVDTPDEDEKCGATAAVVS-LSRNSGF------IHKEVDGKMSQPPSTFNNQQH-ES 652

Query: 767  LCMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYV 588
             C   +  +  ++    + ++ N S + H  P+ E    TKD   +   G +  ++    
Sbjct: 653  PCHVQENTRSPDS----NIVETNSSLDGHLTPYLEVNYGTKDLLPEKACGSYPFVDP--- 705

Query: 587  CLETSHVEGTTNLKLMEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASD 408
                  V G          T+ QE C   +  QEK+ +  E     A+++S   D + +D
Sbjct: 706  --LMQDVSGN--------NTSHQEVC--GTPVQEKDVSPFE-----AQLASGTGDGIVAD 748

Query: 407  ------LTDVLVDAHTN-NSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQ 249
                    + +VD H N  +E   + L   + +     +EG       +   ++ L KD 
Sbjct: 749  GLHNGSEAEAVVDGHLNRTTEIKGASLKDLMIDTAQQCREG-----EVHECGEEHLGKDG 803

Query: 248  TLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAES 69
                            +S+G  E      EA L+EE+LLL +E+ +LGD+Q+KLERNAES
Sbjct: 804  ----------------SSYGRKE------EARLEEEVLLLGEEQRELGDKQKKLERNAES 841

Query: 68   VSSEMFAECQELLQMFGLPYII 3
            VSSEMFAECQELLQMFGLP+II
Sbjct: 842  VSSEMFAECQELLQMFGLPFII 863


>ref|XP_010317093.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Solanum lycopersicum]
          Length = 1333

 Score =  209 bits (531), Expect = 8e-51
 Identities = 189/621 (30%), Positives = 285/621 (45%), Gaps = 14/621 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSESTNCIS--STARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +L SAG ++      +V   +   N  S  ST +  SV+ + V+E    F+ DVETY DE
Sbjct: 110  VLASAGEDQTSKKSSEVQTENNLANAASDASTRKSSSVLESIVSEPETAFNDDVETYLDE 169

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTP-TNAEAIRKSILGSPMATEN 1473
                        G+ MTRDLQRNLD            N   ++   +  + + +P+   +
Sbjct: 170  RGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEENVSRNKDFSDVPTVSDTDVHTPVIVSD 229

Query: 1472 SHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDE 1293
            +     S+  +DD  + +   N            E S L   T ++ISFED+      ++
Sbjct: 230  TISHLNSSNPDDDGKACLNNKN------------EQSELRSGTTIQISFEDNFEHDCAND 277

Query: 1292 DDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQ--P 1119
            DD +FA LVAG     +  +   S K S D AS    E+G++ +     S + +  +  P
Sbjct: 278  DDDIFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWEEGVIEKKGDLLSNNSQGERQAP 337

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
              ++G + DE EV+WEEG  D+       P++  ++  +G+LEEEA+ QEA+RRSLED  
Sbjct: 338  LEIDGMD-DEAEVEWEEGCVDICEDPPLLPSDS-KSAYKGALEEEANYQEAVRRSLEDMK 395

Query: 938  AEKSVPMCSETEEADLAA-VGRSGLENRS-GFSLEVPVLEKDMSVSSNMPLNDVLHSEAL 765
              + +    E E ++ A  +   G+ + S G     P + K            +L  + L
Sbjct: 396  DHRYIDKSHEKEMSEEAIQIAAQGISSESFGQENYCPTVHK------------ILQQKDL 443

Query: 764  CMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVC 585
               +      +TV + D    N S   H G     +     GY ++ +       D  + 
Sbjct: 444  PSEIQTADLHDTVHEMDIAGSNKSLGSHMGE----QFQANSGYGNMQIEKANSHADRNLQ 499

Query: 584  LE--TSHVEGTTNLKL-MEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVA 414
            +E  TSH     +  + ME         +D + ++  + T G   + + + +S  +    
Sbjct: 500  IEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQ 559

Query: 413  SDLTDVL----VDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQT 246
            S L + +     DA    SEAA    + E T     F EG     TT+  S Q L ++  
Sbjct: 560  STLNESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGF----TTDINSAQNLDEE-- 613

Query: 245  LGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESV 66
             G   D  ++    + S    E Q +   ASL+EEM +L +ER  LGDEQRKLERNAESV
Sbjct: 614  -GACDDPLFERIGNLDSASTKEDQ-KVMMASLEEEMHVLDKEREKLGDEQRKLERNAESV 671

Query: 65   SSEMFAECQELLQMFGLPYII 3
            SSEMFAECQELLQMFGLPYII
Sbjct: 672  SSEMFAECQELLQMFGLPYII 692


>ref|XP_004233336.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Solanum lycopersicum]
          Length = 1539

 Score =  209 bits (531), Expect = 8e-51
 Identities = 189/621 (30%), Positives = 285/621 (45%), Gaps = 14/621 (2%)
 Frame = -2

Query: 1823 ILTSAGVERNGDTQHQVPATSESTNCIS--STARFHSVIGTCVNEARNDFDKDVETYTDE 1650
            +L SAG ++      +V   +   N  S  ST +  SV+ + V+E    F+ DVETY DE
Sbjct: 316  VLASAGEDQTSKKSSEVQTENNLANAASDASTRKSSSVLESIVSEPETAFNDDVETYLDE 375

Query: 1649 XXXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTP-TNAEAIRKSILGSPMATEN 1473
                        G+ MTRDLQRNLD            N   ++   +  + + +P+   +
Sbjct: 376  RGHLRVSRLRAMGVRMTRDLQRNLDLMKEIEEENVSRNKDFSDVPTVSDTDVHTPVIVSD 435

Query: 1472 SHRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDE 1293
            +     S+  +DD  + +   N            E S L   T ++ISFED+      ++
Sbjct: 436  TISHLNSSNPDDDGKACLNNKN------------EQSELRSGTTIQISFEDNFEHDCAND 483

Query: 1292 DDGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFSIDVEDNQ--P 1119
            DD +FA LVAG     +  +   S K S D AS    E+G++ +     S + +  +  P
Sbjct: 484  DDDIFASLVAGDPTMEFLMDHSPSKKQSLDSASDVEWEEGVIEKKGDLLSNNSQGERQAP 543

Query: 1118 SFVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFT 939
              ++G + DE EV+WEEG  D+       P++  ++  +G+LEEEA+ QEA+RRSLED  
Sbjct: 544  LEIDGMD-DEAEVEWEEGCVDICEDPPLLPSDS-KSAYKGALEEEANYQEAVRRSLEDMK 601

Query: 938  AEKSVPMCSETEEADLAA-VGRSGLENRS-GFSLEVPVLEKDMSVSSNMPLNDVLHSEAL 765
              + +    E E ++ A  +   G+ + S G     P + K            +L  + L
Sbjct: 602  DHRYIDKSHEKEMSEEAIQIAAQGISSESFGQENYCPTVHK------------ILQQKDL 649

Query: 764  CMTVDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVC 585
               +      +TV + D    N S   H G     +     GY ++ +       D  + 
Sbjct: 650  PSEIQTADLHDTVHEMDIAGSNKSLGSHMGE----QFQANSGYGNMQIEKANSHADRNLQ 705

Query: 584  LE--TSHVEGTTNLKL-MEVKTTGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVA 414
            +E  TSH     +  + ME         +D + ++  + T G   + + + +S  +    
Sbjct: 706  IEKATSHTNRNLHCDIHMEPTIPLDGSEVDMTKKKIADTTVGVSCNNNTQSASDVTSIEQ 765

Query: 413  SDLTDVL----VDAHTNNSEAAPSLLSSEITNENFNFQEGAYIDQTTNNVSKQELVKDQT 246
            S L + +     DA    SEAA    + E T     F EG     TT+  S Q L ++  
Sbjct: 766  STLNESMNARTTDAQEYESEAAAHHYTHETTEITKAFTEGF----TTDINSAQNLDEE-- 819

Query: 245  LGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLLRQERMDLGDEQRKLERNAESV 66
             G   D  ++    + S    E Q +   ASL+EEM +L +ER  LGDEQRKLERNAESV
Sbjct: 820  -GACDDPLFERIGNLDSASTKEDQ-KVMMASLEEEMHVLDKEREKLGDEQRKLERNAESV 877

Query: 65   SSEMFAECQELLQMFGLPYII 3
            SSEMFAECQELLQMFGLPYII
Sbjct: 878  SSEMFAECQELLQMFGLPYII 898


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score =  202 bits (513), Expect = 9e-49
 Identities = 199/642 (30%), Positives = 298/642 (46%), Gaps = 36/642 (5%)
 Frame = -2

Query: 1820 LTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEX 1647
            LTSA  E + D Q +  +   S     + S+ + +    +  +E+ +  D+DV TY D  
Sbjct: 106  LTSARKEIDEDKQQERHSDHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDAT 165

Query: 1646 XXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIR-KSILGSPMATENS 1470
                       GI MTRDLQRNLD            N   N +++  KS + +  +  N 
Sbjct: 166  GRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKSVSNG 225

Query: 1469 HRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDED 1290
            ++   ++ D+          NG ++    S+ Q  S    ++ MEI+FEDD      D+D
Sbjct: 226  NQFVETSHDD----------NGESVNVNESNQQ--SAFETESCMEITFEDDGKTEYFDDD 273

Query: 1289 DGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFS--IDVEDNQPS 1116
            D +FA L AG  ++  S E     K  S   S    E+G++       +  ++ E N  +
Sbjct: 274  D-IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN 332

Query: 1115 FVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTA 936
                N +D+ EV+WEE   D P S+S GP E    +S+G  EEE+D+QEAIRRSL D   
Sbjct: 333  -KESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGV 390

Query: 935  EKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCMT 756
            EKS    S+  E+         L+   G      + EK  + +S+ P + V      C  
Sbjct: 391  EKSNSFPSDVIESKNLG---ENLDEDFG-----SLHEKGDTGASSFPGDAVNWQNKSCEN 442

Query: 755  VDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVCLET 576
            +D  ++  TV +    +  +SPE  S      +  T        L       DG    ++
Sbjct: 443  LDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMT-------ILSKFSERSDGSHSEQS 495

Query: 575  SHVEGTTNLKLMEVKT---TGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASDL 405
             H E    +  +E +    TG  K LD S + +  +T  +      K +SH+ DA   D+
Sbjct: 496  RHNETAEFVATLEKEVDFPTG--KHLDVSKEVDGLSTISDSWF---KDNSHSFDAAHGDI 550

Query: 404  TDVL-VDAHTNNSEAAPSLLS-------SEITNENFNFQEGAYIDQT---TNNVS----- 273
             D + VD  T + +   +L+S       +EI +++      A   Q    T N+S     
Sbjct: 551  PDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQ 610

Query: 272  ------------KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLL 129
                        +QEL  D T     ++  Q+ D     GN  ++++ S+ASLDEE+L+L
Sbjct: 611  SSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLIL 670

Query: 128  RQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
             QE +++ DEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 671  DQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 712


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score =  202 bits (513), Expect = 9e-49
 Identities = 199/642 (30%), Positives = 298/642 (46%), Gaps = 36/642 (5%)
 Frame = -2

Query: 1820 LTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEX 1647
            LTSA  E + D Q +  +   S     + S+ + +    +  +E+ +  D+DV TY D  
Sbjct: 145  LTSARKEIDEDKQQERHSDHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDAT 204

Query: 1646 XXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIR-KSILGSPMATENS 1470
                       GI MTRDLQRNLD            N   N +++  KS + +  +  N 
Sbjct: 205  GRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKSVSNG 264

Query: 1469 HRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDED 1290
            ++   ++ D+          NG ++    S+ Q  S    ++ MEI+FEDD      D+D
Sbjct: 265  NQFVETSHDD----------NGESVNVNESNQQ--SAFETESCMEITFEDDGKTEYFDDD 312

Query: 1289 DGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFS--IDVEDNQPS 1116
            D +FA L AG  ++  S E     K  S   S    E+G++       +  ++ E N  +
Sbjct: 313  D-IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN 371

Query: 1115 FVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTA 936
                N +D+ EV+WEE   D P S+S GP E    +S+G  EEE+D+QEAIRRSL D   
Sbjct: 372  -KESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGV 429

Query: 935  EKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCMT 756
            EKS    S+  E+         L+   G      + EK  + +S+ P + V      C  
Sbjct: 430  EKSNSFPSDVIESKNLG---ENLDEDFG-----SLHEKGDTGASSFPGDAVNWQNKSCEN 481

Query: 755  VDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVCLET 576
            +D  ++  TV +    +  +SPE  S      +  T        L       DG    ++
Sbjct: 482  LDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMT-------ILSKFSERSDGSHSEQS 534

Query: 575  SHVEGTTNLKLMEVKT---TGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASDL 405
             H E    +  +E +    TG  K LD S + +  +T  +      K +SH+ DA   D+
Sbjct: 535  RHNETAEFVATLEKEVDFPTG--KHLDVSKEVDGLSTISDSWF---KDNSHSFDAAHGDI 589

Query: 404  TDVL-VDAHTNNSEAAPSLLS-------SEITNENFNFQEGAYIDQT---TNNVS----- 273
             D + VD  T + +   +L+S       +EI +++      A   Q    T N+S     
Sbjct: 590  PDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQ 649

Query: 272  ------------KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLL 129
                        +QEL  D T     ++  Q+ D     GN  ++++ S+ASLDEE+L+L
Sbjct: 650  SSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLIL 709

Query: 128  RQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
             QE +++ DEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 710  DQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 751


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  202 bits (513), Expect = 9e-49
 Identities = 199/642 (30%), Positives = 298/642 (46%), Gaps = 36/642 (5%)
 Frame = -2

Query: 1820 LTSAGVERNGDTQHQVPATSES--TNCISSTARFHSVIGTCVNEARNDFDKDVETYTDEX 1647
            LTSA  E + D Q +  +   S     + S+ + +    +  +E+ +  D+DV TY D  
Sbjct: 296  LTSARKEIDEDKQQERHSDHPSGFLGSVKSSCKSNVAAESVPDESTSAPDEDVGTYVDAT 355

Query: 1646 XXXXXXXXXXXGIHMTRDLQRNLDXXXXXXXXXXXENTPTNAEAIR-KSILGSPMATENS 1470
                       GI MTRDLQRNLD            N   N +++  KS + +  +  N 
Sbjct: 356  GRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKSVSNG 415

Query: 1469 HRLEVSAGDEDDEISLMRRMNGPTIQGENSHLQETSILAGKTAMEISFEDDSGFHATDED 1290
            ++   ++ D+          NG ++    S+ Q  S    ++ MEI+FEDD      D+D
Sbjct: 416  NQFVETSHDD----------NGESVNVNESNQQ--SAFETESCMEITFEDDGKTEYFDDD 463

Query: 1289 DGLFAHLVAGSSISRYSSESVLSGKHSSDFASQCSIEKGMLGRNSSSFS--IDVEDNQPS 1116
            D +FA L AG  ++  S E     K  S   S    E+G++       +  ++ E N  +
Sbjct: 464  D-IFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNAEHNLLN 522

Query: 1115 FVNGNNSDEGEVDWEEGVCDVPGSASPGPTEHVETVSRGSLEEEADIQEAIRRSLEDFTA 936
                N +D+ EV+WEE   D P S+S GP E    +S+G  EEE+D+QEAIRRSL D   
Sbjct: 523  -KESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGV 580

Query: 935  EKSVPMCSETEEADLAAVGRSGLENRSGFSLEVPVLEKDMSVSSNMPLNDVLHSEALCMT 756
            EKS    S+  E+         L+   G      + EK  + +S+ P + V      C  
Sbjct: 581  EKSNSFPSDVIESKNLG---ENLDEDFG-----SLHEKGDTGASSFPGDAVNWQNKSCEN 632

Query: 755  VDGVKRLETVVQKDTLQINDSPEKHSGPFTETRVDTKDGYQDLTLGHHEVIEDGYVCLET 576
            +D  ++  TV +    +  +SPE  S      +  T        L       DG    ++
Sbjct: 633  LDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMT-------ILSKFSERSDGSHSEQS 685

Query: 575  SHVEGTTNLKLMEVKT---TGQEKCLDKSNQQEKEATFGEYTHGSAKISSHASDAVASDL 405
             H E    +  +E +    TG  K LD S + +  +T  +      K +SH+ DA   D+
Sbjct: 686  RHNETAEFVATLEKEVDFPTG--KHLDVSKEVDGLSTISDSWF---KDNSHSFDAAHGDI 740

Query: 404  TDVL-VDAHTNNSEAAPSLLS-------SEITNENFNFQEGAYIDQT---TNNVS----- 273
             D + VD  T + +   +L+S       +EI +++      A   Q    T N+S     
Sbjct: 741  PDTIQVDKKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQ 800

Query: 272  ------------KQELVKDQTLGMPPDEGWQYRDEIASHGNVEQQLERSEASLDEEMLLL 129
                        +QEL  D T     ++  Q+ D     GN  ++++ S+ASLDEE+L+L
Sbjct: 801  SSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLIL 860

Query: 128  RQERMDLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 3
             QE +++ DEQRKLERNAESVSSEMFAECQELLQMFGLPYII
Sbjct: 861  DQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYII 902