BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00011685
         (988 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010915147.1| PREDICTED: single-stranded DNA-binding prote...   273   6e-82
ref|XP_010915145.1| PREDICTED: single-stranded DNA-binding prote...   273   8e-82
ref|XP_009758353.1| PREDICTED: single-stranded DNA-binding prote...   271   4e-81
ref|XP_012463276.1| PREDICTED: single-stranded DNA-binding prote...   271   5e-81
ref|XP_010256524.1| PREDICTED: single-stranded DNA-binding prote...   268   9e-81
ref|XP_012463275.1| PREDICTED: single-stranded DNA-binding prote...   271   1e-80
ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, ch...   271   2e-80
ref|XP_008809721.1| PREDICTED: single-stranded DNA-binding prote...   266   2e-80
ref|XP_009599234.1| PREDICTED: single-stranded DNA-binding prote...   269   2e-80
gb|KJB80022.1| hypothetical protein B456_013G077400 [Gossypium r...   269   4e-80
ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding prote...   265   5e-80
ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citr...   265   5e-80
ref|XP_007046213.1| SsDNA-binding transcriptional regulator isof...   270   4e-79
ref|NP_001289829.1| single-stranded DNA-binding protein WHY1, ch...   266   5e-79
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   265   8e-79
ref|XP_009110543.1| PREDICTED: single-stranded DNA-binding prote...   264   8e-79
emb|CDX96856.1| BnaA08g23990D [Brassica napus]                        264   8e-79
pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regul...   268   2e-78
ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citr...   265   4e-78
ref|XP_002277278.1| PREDICTED: single-stranded DNA-binding prote...   262   1e-77

>ref|XP_010915147.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X4 [Elaeis guineensis]
          Length = 263

 Score =  273 bits (697), Expect(2) = 6e-82
 Identities = 128/156 (82%), Positives = 141/156 (90%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS+EG++LLQFAPA   RQYDW+RKQVFSLSV EIGTL++LG KDSCEFFHDP K
Sbjct: 108 SGAFKLSKEGFILLQFAPAAAARQYDWNRKQVFSLSVPEIGTLLALGGKDSCEFFHDPFK 167

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+SEEGK+RK+ KAEPLPDGSGHFFNLSVQNRLLNVDESIYIP+TKAEF +LNSAFNFIL
Sbjct: 168 GRSEEGKIRKVFKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPITKAEFAILNSAFNFIL 227

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHAFAN+ K +DS  SNN   RSGAELEWGR
Sbjct: 228 PYLLGWHAFANAIKPEDSIRSNNMTARSGAELEWGR 263



 Score = 60.5 bits (145), Expect(2) = 6e-82
 Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = -1

Query: 880 PSDNSYSQKSVGAP--SGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           P D+S++ +  G P  S RV+VGYSIYKGKAALT++P+APEF  LD
Sbjct: 62  PRDSSFASQPPGGPVQSSRVFVGYSIYKGKAALTVEPKAPEFTPLD 107


>ref|XP_010915145.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X3 [Elaeis guineensis]
           gi|743769711|ref|XP_010915146.1| PREDICTED:
           single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X3 [Elaeis guineensis]
          Length = 264

 Score =  273 bits (697), Expect(2) = 8e-82
 Identities = 128/156 (82%), Positives = 141/156 (90%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS+EG++LLQFAPA   RQYDW+RKQVFSLSV EIGTL++LG KDSCEFFHDP K
Sbjct: 109 SGAFKLSKEGFILLQFAPAAAARQYDWNRKQVFSLSVPEIGTLLALGGKDSCEFFHDPFK 168

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+SEEGK+RK+ KAEPLPDGSGHFFNLSVQNRLLNVDESIYIP+TKAEF +LNSAFNFIL
Sbjct: 169 GRSEEGKIRKVFKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPITKAEFAILNSAFNFIL 228

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHAFAN+ K +DS  SNN   RSGAELEWGR
Sbjct: 229 PYLLGWHAFANAIKPEDSIRSNNMTARSGAELEWGR 264



 Score = 60.1 bits (144), Expect(2) = 8e-82
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 3/47 (6%)
 Frame = -1

Query: 880 PSDNSYSQKSVGAP---SGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           P D+S++ +  G P   S RV+VGYSIYKGKAALT++P+APEF  LD
Sbjct: 62  PRDSSFASQPPGGPAVQSSRVFVGYSIYKGKAALTVEPKAPEFTPLD 108


>ref|XP_009758353.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Nicotiana sylvestris]
          Length = 269

 Score =  271 bits (693), Expect(2) = 4e-81
 Identities = 126/156 (80%), Positives = 144/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLSREG+VLLQFAPA G+RQYDW RKQVFSLSVTE+G+L+SLGAKDSCEFFHDPNK
Sbjct: 114 SGAFKLSREGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEMGSLISLGAKDSCEFFHDPNK 173

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+S+EGKVRK+LK EPLPDGSGHFFNLSVQN+L+N+DE+IYIPVTKAEF VL SAFNF++
Sbjct: 174 GRSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLISAFNFVV 233

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWH   NS K +D++ SNNANPRSGA+LEW R
Sbjct: 234 PYLLGWHTAVNSFKPEDASRSNNANPRSGADLEWSR 269



 Score = 59.3 bits (142), Expect(2) = 4e-81
 Identities = 33/70 (47%), Positives = 37/70 (52%)
 Frame = -1

Query: 958 SAKFPRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTID 779
           S   PR LSL C                     Q+  GA + +VYVGYSIYKGKAALT+D
Sbjct: 50  SKALPRNLSLTCRHSEYFEPQ------QQQQQQQQQQGASTPKVYVGYSIYKGKAALTVD 103

Query: 778 PRAPEFVALD 749
           PR PEF  LD
Sbjct: 104 PRPPEFSPLD 113


>ref|XP_012463276.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X2 [Gossypium raimondii]
           gi|763813164|gb|KJB80016.1| hypothetical protein
           B456_013G077400 [Gossypium raimondii]
          Length = 269

 Score =  271 bits (692), Expect(2) = 5e-81
 Identities = 125/156 (80%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+SREG+VLLQFAPA G+RQYDWSRKQVFSLSVTEIGTL+SLG ++SCEFFHDP K
Sbjct: 114 SGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFK 173

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGKVRK+LK EPLPDGSGHFFNL VQN+LLNVDE++YIP+T+ EFTVL SAF+FIL
Sbjct: 174 GKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSFIL 233

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHAFANSTK DD++ +NNANPR G + EW R
Sbjct: 234 PYLLGWHAFANSTKPDDTSRANNANPRYGGDYEWSR 269



 Score = 59.3 bits (142), Expect(2) = 5e-81
 Identities = 34/66 (51%), Positives = 41/66 (62%)
 Frame = -1

Query: 946 PRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAP 767
           P K SL+C               S +S S  S+G P+ R YVG+SIYKGKAALT++PRAP
Sbjct: 50  PSKFSLKCRQSEYFDQKQRFND-SSSSTSPSSLGLPA-RFYVGHSIYKGKAALTVEPRAP 107

Query: 766 EFVALD 749
           EFV LD
Sbjct: 108 EFVPLD 113


>ref|XP_010256524.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Nelumbo nucifera]
          Length = 261

 Score =  268 bits (686), Expect(2) = 9e-81
 Identities = 128/156 (82%), Positives = 145/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS+EG+VLLQFAPAVG+RQYDWSRKQVFSLSVTEIGTL++LGA++SCEFFHDP K
Sbjct: 106 SGAFKLSKEGFVLLQFAPAVGVRQYDWSRKQVFSLSVTEIGTLINLGARESCEFFHDPFK 165

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKSEEGKVRK+LKAEPLPDGSGHFFNLSVQN+L N+DESIYIP+TKAEFTVL SAFNFIL
Sbjct: 166 GKSEEGKVRKLLKAEPLPDGSGHFFNLSVQNKLSNIDESIYIPITKAEFTVLISAFNFIL 225

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYL+GWHAFA+STK +D    +NAN + GA+LEW R
Sbjct: 226 PYLIGWHAFADSTKPNDPGRVSNANLKYGADLEWSR 261



 Score = 60.8 bits (146), Expect(2) = 9e-81
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = -1

Query: 958 SAKFPRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTID 779
           SAK  + LS++C              PS++S + +S GA   RV+VG+SIYKGKAALT++
Sbjct: 37  SAKTFKDLSVKCRRSEYFEQQRFTR-PSEDSSTSQSPGALPPRVFVGHSIYKGKAALTVE 95

Query: 778 PRAPEFVALD 749
           P+APEF+ LD
Sbjct: 96  PKAPEFIPLD 105


>ref|XP_012463275.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X1 [Gossypium raimondii]
           gi|763813165|gb|KJB80017.1| hypothetical protein
           B456_013G077400 [Gossypium raimondii]
          Length = 270

 Score =  271 bits (692), Expect(2) = 1e-80
 Identities = 125/156 (80%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+SREG+VLLQFAPA G+RQYDWSRKQVFSLSVTEIGTL+SLG ++SCEFFHDP K
Sbjct: 115 SGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFK 174

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGKVRK+LK EPLPDGSGHFFNL VQN+LLNVDE++YIP+T+ EFTVL SAF+FIL
Sbjct: 175 GKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSFIL 234

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHAFANSTK DD++ +NNANPR G + EW R
Sbjct: 235 PYLLGWHAFANSTKPDDTSRANNANPRYGGDYEWSR 270



 Score = 58.2 bits (139), Expect(2) = 1e-80
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = -1

Query: 946 PRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAP 767
           P K SL+C               S ++      G P+ R YVG+SIYKGKAALT++PRAP
Sbjct: 50  PSKFSLKCRQSEYFDQKQRFNDSSSSTSPSSLAGLPA-RFYVGHSIYKGKAALTVEPRAP 108

Query: 766 EFVALD 749
           EFV LD
Sbjct: 109 EFVPLD 114


>ref|NP_001275155.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
           tuberosum] gi|75174555|sp|Q9LL85.1|WHY1_SOLTU RecName:
           Full=Single-stranded DNA-binding protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  271 bits (693), Expect(2) = 2e-80
 Identities = 126/156 (80%), Positives = 144/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLSREG V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+++SLGAKDSCEFFHDPNK
Sbjct: 119 SGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNK 178

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+S+EG+VRK+LK EPLPDGSGHFFNLSVQN+L+N+DE+IYIPVTKAEF VL SAFNF++
Sbjct: 179 GRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVM 238

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWH   NS K +D++ SNNANPRSGAELEW R
Sbjct: 239 PYLLGWHTAVNSFKPEDASRSNNANPRSGAELEWNR 274



 Score = 57.0 bits (136), Expect(2) = 2e-80
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -1

Query: 955 AKFPRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDP 776
           A  PR LSL C                     Q+  GA + +V+VGYSIYKGKAALT++P
Sbjct: 55  AALPRNLSLTCRHSDYFEPQQ-----QQQQQQQQPQGASTPKVFVGYSIYKGKAALTVEP 109

Query: 775 RAPEFVALD 749
           R+PEF  LD
Sbjct: 110 RSPEFSPLD 118


>ref|XP_008809721.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like isoform X1 [Phoenix dactylifera]
          Length = 261

 Score =  266 bits (680), Expect(2) = 2e-80
 Identities = 125/156 (80%), Positives = 140/156 (89%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+S+EG++LLQFAPA  +RQYDW+RKQVFSLSV EIG LM+L  KDSCEFFHDP K
Sbjct: 106 SGAFKVSKEGFILLQFAPAAAVRQYDWNRKQVFSLSVPEIGALMALSEKDSCEFFHDPFK 165

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+SEEGK+RK+LKAEPLPDGSGHFFNLSVQNRLLNVDESIYIP+TKAEF +L SAFNFIL
Sbjct: 166 GRSEEGKIRKVLKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPITKAEFAILKSAFNFIL 225

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           P+LLGWHAFAN+ K +DS  SNN   RSGAELEWGR
Sbjct: 226 PHLLGWHAFANAIKPEDSIRSNNMTARSGAELEWGR 261



 Score = 62.0 bits (149), Expect(2) = 2e-80
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -1

Query: 880 PSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           P D+S++ +  G  S RV+VGYSIYKGKAALT++P+APEF  LD
Sbjct: 62  PRDSSFAPQPPGVQSSRVFVGYSIYKGKAALTVEPKAPEFTPLD 105


>ref|XP_009599234.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Nicotiana tomentosiformis]
          Length = 263

 Score =  269 bits (687), Expect(2) = 2e-80
 Identities = 125/156 (80%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLSREG+VLLQFAPA G+RQYDW RKQVFSLSVTE+G+L+SLGAKDSCEFFHDPNK
Sbjct: 108 SGAFKLSREGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEMGSLISLGAKDSCEFFHDPNK 167

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+S+EGKVRK+L+ EPLPDGSGHFFNLSVQN+L+N+DESIYIPVTKAEF VL SAFNF++
Sbjct: 168 GRSDEGKVRKVLRVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTKAEFAVLVSAFNFVV 227

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWH   NS K +D++ SNNANPR GA+LEW R
Sbjct: 228 PYLLGWHTAVNSFKPEDASRSNNANPRLGADLEWSR 263



 Score = 58.9 bits (141), Expect(2) = 2e-80
 Identities = 33/71 (46%), Positives = 38/71 (53%)
 Frame = -1

Query: 961 FSAKFPRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTI 782
           +S   PR LSL C                     Q+  GA + +VYVGYSIYKGKAALT+
Sbjct: 49  YSKALPRNLSLTCRHSEYFEP------------QQQQQGASTPKVYVGYSIYKGKAALTV 96

Query: 781 DPRAPEFVALD 749
           DPR PEF  LD
Sbjct: 97  DPRPPEFSPLD 107


>gb|KJB80022.1| hypothetical protein B456_013G077400 [Gossypium raimondii]
          Length = 270

 Score =  269 bits (687), Expect(2) = 4e-80
 Identities = 124/154 (80%), Positives = 142/154 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+SREG+VLLQFAPA G+RQYDWSRKQVFSLSVTEIGTL+SLG ++SCEFFHDP K
Sbjct: 115 SGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFK 174

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGKVRK+LK EPLPDGSGHFFNL VQN+LLNVDE++YIP+T+ EFTVL SAF+FIL
Sbjct: 175 GKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSAFSFIL 234

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEW 265
           PYLLGWHAFANSTK DD++ +NNANPR G + EW
Sbjct: 235 PYLLGWHAFANSTKPDDTSRANNANPRYGGDYEW 268



 Score = 58.2 bits (139), Expect(2) = 4e-80
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = -1

Query: 946 PRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAP 767
           P K SL+C               S ++      G P+ R YVG+SIYKGKAALT++PRAP
Sbjct: 50  PSKFSLKCRQSEYFDQKQRFNDSSSSTSPSSLAGLPA-RFYVGHSIYKGKAALTVEPRAP 108

Query: 766 EFVALD 749
           EFV LD
Sbjct: 109 EFVPLD 114


>ref|XP_006483225.1| PREDICTED: single-stranded DNA-binding protein WHY1,
           chloroplastic-like [Citrus sinensis]
           gi|641864131|gb|KDO82817.1| hypothetical protein
           CISIN_1g024467mg [Citrus sinensis]
          Length = 267

 Score =  265 bits (678), Expect(2) = 5e-80
 Identities = 123/156 (78%), Positives = 145/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGA KLSREG+V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+L++LGA++SCEFFHDP K
Sbjct: 112 SGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFK 171

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKSEEGKVRK+LK EPLPDGSGHFFNLSVQN+L+N+DESIYIPVT+AE+TVL SAFNFIL
Sbjct: 172 GKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFIL 231

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHA+A++ ++DD+A +NNANPR G + EW R
Sbjct: 232 PYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267



 Score = 61.2 bits (147), Expect(2) = 5e-80
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -1

Query: 943 RKLSLQCXXXXXXXXXXXXXRPSDNSYSQK--SVGAPSGRVYVGYSIYKGKAALTIDPRA 770
           +KL ++C              PS++SY+    +VG    RVYVG+SIYKGKAALT++PR 
Sbjct: 45  KKLYVKCRQSEYYEQKSFSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRG 104

Query: 769 PEFVALD 749
           PEFV+LD
Sbjct: 105 PEFVSLD 111


>ref|XP_006438627.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
           gi|557540823|gb|ESR51867.1| hypothetical protein
           CICLE_v10032427mg [Citrus clementina]
          Length = 267

 Score =  265 bits (678), Expect(2) = 5e-80
 Identities = 123/156 (78%), Positives = 145/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGA KLSREG+V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+L++LGA++SCEFFHDP K
Sbjct: 112 SGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFK 171

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKSEEGKVRK+LK EPLPDGSGHFFNLSVQN+L+N+DESIYIPVT+AE+TVL SAFNFIL
Sbjct: 172 GKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFIL 231

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHA+A++ ++DD+A +NNANPR G + EW R
Sbjct: 232 PYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 267



 Score = 61.2 bits (147), Expect(2) = 5e-80
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -1

Query: 943 RKLSLQCXXXXXXXXXXXXXRPSDNSYSQK--SVGAPSGRVYVGYSIYKGKAALTIDPRA 770
           +KL ++C              PS++SY+    +VG    RVYVG+SIYKGKAALT++PR 
Sbjct: 45  KKLYVKCRQSEYYEQKSFSASPSNSSYAPTDVAVGTLPTRVYVGHSIYKGKAALTVEPRG 104

Query: 769 PEFVALD 749
           PEFV+LD
Sbjct: 105 PEFVSLD 111


>ref|XP_007046213.1| SsDNA-binding transcriptional regulator isoform 1 [Theobroma cacao]
           gi|508710148|gb|EOY02045.1| SsDNA-binding
           transcriptional regulator isoform 1 [Theobroma cacao]
          Length = 270

 Score =  270 bits (689), Expect(2) = 4e-79
 Identities = 126/156 (80%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+SREG+VLLQFAPA G+RQYDWSRKQVFSLSVTEIG L+SLGA++SCEFFHDP K
Sbjct: 115 SGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGALISLGARESCEFFHDPFK 174

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKSEEGKVRK+LK EPLPDGSGHFFNL VQNRLLN+DE+IYIP+T+AEFTVLNSAF+FIL
Sbjct: 175 GKSEEGKVRKVLKVEPLPDGSGHFFNLGVQNRLLNLDENIYIPITRAEFTVLNSAFSFIL 234

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHAFANS K ++++  NNANPR G + EW R
Sbjct: 235 PYLLGWHAFANSIKPEEASRVNNANPRYGGDYEWSR 270



 Score = 54.3 bits (129), Expect(2) = 4e-79
 Identities = 31/66 (46%), Positives = 38/66 (57%)
 Frame = -1

Query: 946 PRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAP 767
           P K SL+C               S  + S  + G P  R YVG+S+YKGKAALT++PRAP
Sbjct: 51  PSKFSLKCRQSEYFDQQQRFSNSSSTA-SPPASGLPP-RFYVGHSVYKGKAALTVEPRAP 108

Query: 766 EFVALD 749
           EFV LD
Sbjct: 109 EFVPLD 114


>ref|NP_001289829.1| single-stranded DNA-binding protein WHY1, chloroplastic [Solanum
           lycopersicum] gi|426308946|gb|AFY24240.1| whirly protein
           [Solanum lycopersicum]
          Length = 268

 Score =  266 bits (680), Expect(2) = 5e-79
 Identities = 123/156 (78%), Positives = 142/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS+EG V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+++SLGAKDSCEFFHDPNK
Sbjct: 113 SGAFKLSKEGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGAKDSCEFFHDPNK 172

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+S+E +VRK+LK EPLPDGSGHFFNLSVQN+L+N+DE+IYIPVTKAEF VL SAFNF++
Sbjct: 173 GRSDESRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVM 232

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWH   NS K +D++ SNN NPRSGAELEW R
Sbjct: 233 PYLLGWHTAVNSFKPEDASRSNNTNPRSGAELEWNR 268



 Score = 57.4 bits (137), Expect(2) = 5e-79
 Identities = 31/71 (43%), Positives = 39/71 (54%)
 Frame = -1

Query: 961 FSAKFPRKLSLQCXXXXXXXXXXXXXRPSDNSYSQKSVGAPSGRVYVGYSIYKGKAALTI 782
           + A  PR LSL C                     Q+  GA + +V+VGYSIYKGKAALT+
Sbjct: 51  YKAALPRNLSLTCRHSDYF---------EPQQQQQQLQGASTPKVFVGYSIYKGKAALTV 101

Query: 781 DPRAPEFVALD 749
           +PR+PEF  LD
Sbjct: 102 EPRSPEFSPLD 112


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  265 bits (678), Expect(2) = 8e-79
 Identities = 124/156 (79%), Positives = 140/156 (89%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK++REG+VLLQFAPA G+RQYDWSRKQVFSLSVTEIGT++SLGA+DSCEFFHDPNK
Sbjct: 116 SGAFKVAREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTIISLGARDSCEFFHDPNK 175

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGK+RK+LK EPLPDGSGHFFNLSVQN+ +N+DESIYIPVTKAEF VL SAFN+IL
Sbjct: 176 GKSDEGKIRKVLKVEPLPDGSGHFFNLSVQNKPMNMDESIYIPVTKAEFAVLISAFNYIL 235

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWH FANS K D +   NNANPR G + EW R
Sbjct: 236 PYLLGWHTFANSIKPDLNGHMNNANPRFGGDYEWSR 271



 Score = 57.4 bits (137), Expect(2) = 8e-79
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -1

Query: 877 SDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           +D+S++ +S  A   RVYVG+SIYKGKAALT++PRAPEF ALD
Sbjct: 74  NDSSFASQSPAAVP-RVYVGHSIYKGKAALTVEPRAPEFAALD 115


>ref|XP_009110543.1| PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic
           [Brassica rapa]
          Length = 269

 Score =  264 bits (674), Expect(2) = 8e-79
 Identities = 121/156 (77%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS++G++LLQFAPA G+RQYDWS+KQVFSLSV+EIGTL+SLG ++SCEFFHDPNK
Sbjct: 114 SGAFKLSKDGFLLLQFAPAAGVRQYDWSKKQVFSLSVSEIGTLVSLGPRESCEFFHDPNK 173

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGKVRK+LK EPLPDGSGHFFNLSVQN+LLNVDESIYIP+T+AEFTVL SAFNF+L
Sbjct: 174 GKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDESIYIPITRAEFTVLVSAFNFVL 233

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYL+GWHAFANS K ++S  +NNA+P  G + EW R
Sbjct: 234 PYLIGWHAFANSIKPEESNRTNNASPNYGGDYEWNR 269



 Score = 58.9 bits (141), Expect(2) = 8e-79
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = -1

Query: 877 SDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           S +S SQ   G P+ R YVG+SIYKGKAALT++PRAPEFV+LD
Sbjct: 72  SSSSSSQNGEGGPA-RFYVGHSIYKGKAALTVEPRAPEFVSLD 113


>emb|CDX96856.1| BnaA08g23990D [Brassica napus]
          Length = 269

 Score =  264 bits (674), Expect(2) = 8e-79
 Identities = 120/156 (76%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLS++G++LLQFAPA G+RQYDWS+KQVFSLSV+EIGTL+SLG ++SCEFFHDPNK
Sbjct: 114 SGAFKLSKDGFLLLQFAPAAGVRQYDWSKKQVFSLSVSEIGTLVSLGPRESCEFFHDPNK 173

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKS+EGKVRK+LK EPLPDGSGHFFNLSVQN+LLNVDE+IYIP+T+AEFTVL SAFNF+L
Sbjct: 174 GKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNVDENIYIPITRAEFTVLTSAFNFVL 233

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYL+GWHAFANS K ++S  +NNA+P  G + EW R
Sbjct: 234 PYLIGWHAFANSIKPEESNRTNNASPNYGGDYEWNR 269



 Score = 58.9 bits (141), Expect(2) = 8e-79
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = -1

Query: 877 SDNSYSQKSVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           S +S SQ   G P+ R YVG+SIYKGKAALT++PRAPEFV+LD
Sbjct: 72  SSSSSSQNGEGGPA-RFYVGHSIYKGKAALTVEPRAPEFVSLD 113


>pdb|1L3A|A Chain A, Structure Of The Plant Transcriptional Regulator Pbf-2
           gi|157878743|pdb|1L3A|B Chain B, Structure Of The Plant
           Transcriptional Regulator Pbf-2 gi|157878744|pdb|1L3A|C
           Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 gi|157878745|pdb|1L3A|D Chain D,
           Structure Of The Plant Transcriptional Regulator Pbf-2
          Length = 227

 Score =  268 bits (684), Expect(2) = 2e-78
 Identities = 124/154 (80%), Positives = 142/154 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFKLSREG V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+++SLG KDSCEFFHDPNK
Sbjct: 65  SGAFKLSREGMVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSIISLGTKDSCEFFHDPNK 124

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+S+EG+VRK+LK EPLPDGSGHFFNLSVQN+L+N+DE+IYIPVTKAEF VL SAFNF++
Sbjct: 125 GRSDEGRVRKVLKVEPLPDGSGHFFNLSVQNKLINLDENIYIPVTKAEFAVLVSAFNFVM 184

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEW 265
           PYLLGWH   NS K +D++ SNNANPRSGAELEW
Sbjct: 185 PYLLGWHTAVNSFKPEDASRSNNANPRSGAELEW 218



 Score = 53.9 bits (128), Expect(2) = 2e-78
 Identities = 24/37 (64%), Positives = 31/37 (83%)
 Frame = -1

Query: 859 QKSVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           Q+  GA + +V+VGYSIYKGKAALT++PR+PEF  LD
Sbjct: 28  QQPQGASTPKVFVGYSIYKGKAALTVEPRSPEFSPLD 64


>ref|XP_006438626.1| hypothetical protein CICLE_v10032427mg [Citrus clementina]
           gi|557540822|gb|ESR51866.1| hypothetical protein
           CICLE_v10032427mg [Citrus clementina]
          Length = 193

 Score =  265 bits (678), Expect(2) = 4e-78
 Identities = 123/156 (78%), Positives = 145/156 (92%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGA KLSREG+V+LQFAPA G+RQYDWSRKQVFSLSVTEIG+L++LGA++SCEFFHDP K
Sbjct: 38  SGAVKLSREGFVMLQFAPAAGVRQYDWSRKQVFSLSVTEIGSLVALGARESCEFFHDPFK 97

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           GKSEEGKVRK+LK EPLPDGSGHFFNLSVQN+L+N+DESIYIPVT+AE+TVL SAFNFIL
Sbjct: 98  GKSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLINLDESIYIPVTRAEYTVLVSAFNFIL 157

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHA+A++ ++DD+A +NNANPR G + EW R
Sbjct: 158 PYLLGWHAYASTIRADDTARTNNANPRYGGDYEWNR 193



 Score = 55.1 bits (131), Expect(2) = 4e-78
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 853 SVGAPSGRVYVGYSIYKGKAALTIDPRAPEFVALD 749
           +VG    RVYVG+SIYKGKAALT++PR PEFV+LD
Sbjct: 3   TVGTLPTRVYVGHSIYKGKAALTVEPRGPEFVSLD 37


>ref|XP_002277278.1| PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic
           [Vitis vinifera] gi|296086421|emb|CBI32010.3| unnamed
           protein product [Vitis vinifera]
          Length = 268

 Score =  262 bits (669), Expect(2) = 1e-77
 Identities = 124/156 (79%), Positives = 143/156 (91%)
 Frame = -2

Query: 726 SGAFKLSREGYVLLQFAPAVGLRQYDWSRKQVFSLSVTEIGTLMSLGAKDSCEFFHDPNK 547
           SGAFK+S+EG+VLLQFAPA G+RQYDW RKQVFSLSVTEIG+L+SLGA++SCEFFHDP K
Sbjct: 114 SGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQVFSLSVTEIGSLISLGARESCEFFHDPFK 173

Query: 546 GKSEEGKVRKILKAEPLPDGSGHFFNLSVQNRLLNVDESIYIPVTKAEFTVLNSAFNFIL 367
           G+SEEGKVRK+LK EPLPDGSGHFFNLSVQN+LLN+DE+IYIPVT+AEF VL SAFNFI+
Sbjct: 174 GRSEEGKVRKVLKVEPLPDGSGHFFNLSVQNKLLNMDENIYIPVTRAEFAVLISAFNFIV 233

Query: 366 PYLLGWHAFANSTKSDDSAPSNNANPRSGAELEWGR 259
           PYLLGWHA+ANS K DD++  NNANPRSG + EW R
Sbjct: 234 PYLLGWHAYANSIKPDDTSRVNNANPRSG-DFEWSR 268



 Score = 56.6 bits (135), Expect(2) = 1e-77
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
 Frame = -1

Query: 985 FFSPKPSIFSAK--FPRKLSLQCXXXXXXXXXXXXXR--PSDNSYSQKSVGAPSGRVYVG 818
           F S  P + S    F +K SLQC             R  P+D+S+     GA   RV+VG
Sbjct: 35  FTSRTPLLLSTTRHFRKKRSLQCRQSDYFQQQNITRRQPPNDSSFG----GALQPRVFVG 90

Query: 817 YSIYKGKAALTIDPRAPEFVALD 749
           +SIYKGKAALT++P+APEF  LD
Sbjct: 91  HSIYKGKAALTVEPKAPEFTPLD 113