BLASTX nr result
ID: Cinnamomum23_contig00011433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00011433
(1124 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010927194.1| PREDICTED: RNA pseudouridine synthase 3, mit... 539 e-150
ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mit... 536 e-150
ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mit... 530 e-148
ref|XP_008807168.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 530 e-147
emb|CBI18448.3| unnamed protein product [Vitis vinifera] 521 e-145
ref|XP_009401551.1| PREDICTED: RNA pseudouridine synthase 3, mit... 519 e-144
ref|XP_007023655.1| Pseudouridine synthase family protein [Theob... 505 e-140
ref|XP_008677489.1| PREDICTED: uncharacterized protein LOC100381... 501 e-139
ref|XP_004974856.2| PREDICTED: RNA pseudouridine synthase 3, mit... 501 e-139
ref|XP_012092035.1| PREDICTED: RNA pseudouridine synthase 3, mit... 501 e-139
ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mit... 499 e-138
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [... 497 e-138
gb|KDO44461.1| hypothetical protein CISIN_1g042463mg, partial [C... 493 e-136
ref|XP_003572398.1| PREDICTED: RNA pseudouridine synthase 3, mit... 492 e-136
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr... 492 e-136
ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prun... 492 e-136
ref|XP_008239134.1| PREDICTED: RNA pseudouridine synthase 3, mit... 491 e-136
gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japo... 491 e-136
ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit... 490 e-136
ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group] g... 490 e-136
>ref|XP_010927194.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Elaeis
guineensis]
Length = 483
Score = 539 bits (1388), Expect = e-150
Identities = 275/363 (75%), Positives = 306/363 (84%), Gaps = 11/363 (3%)
Frame = -3
Query: 1056 ALLPAVRHFSRVCRPQ---AAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPF-PLP 889
ALL AVRH SR+ P+ A PVIRVSNNVA LG PKEGPKPRQLLSLP FP++ PLP
Sbjct: 12 ALLRAVRHLSRLAPPRPVTAEPVIRVSNNVARLGEPKEGPKPRQLLSLPPFPSSHTNPLP 71
Query: 888 GKKTGSL-------RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQ 730
G+K R+TAI+WVKHYFADIP VIQSHF KGL+ +E S P + Q
Sbjct: 72 GRKRDPAADPSKPRRITAITWVKHYFADIPPEVIQSHFRKGLVHVESSNHGVPPDKGDHQ 131
Query: 729 MQHLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKD 550
M L++V N+VME GMKI+ PVSVAE KI+KRYDTIPTATL+PNADEIEY++RLV+YKD
Sbjct: 132 MCQLKRVKHNDVMEVGMKIHIPVSVAETKITKRYDTIPTATLHPNADEIEYIRRLVIYKD 191
Query: 549 SAIIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTK 370
SAIIVLNKPPK+PVKG+LPVHNSMD LAAAALSYG E+GPKLVHRLDRESSGLLLMGRTK
Sbjct: 192 SAIIVLNKPPKVPVKGNLPVHNSMDVLAAAALSYGNEQGPKLVHRLDRESSGLLLMGRTK 251
Query: 369 ESIARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLND 190
E+ ARLHWLF+ +N AKSS QIWNDACEAT QRYWALVIG PKE++G+ISAPLSKVLL+D
Sbjct: 252 ETFARLHWLFANINLAKSSSQIWNDACEATMQRYWALVIGCPKEREGLISAPLSKVLLDD 311
Query: 189 GKTERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTP 10
GKTERVI+AHPSGIDGSQEA TEYRV+GPTINGCSWVEL PLTGRKHQLRV CAEALGTP
Sbjct: 312 GKTERVILAHPSGIDGSQEAVTEYRVMGPTINGCSWVELRPLTGRKHQLRVHCAEALGTP 371
Query: 9 IVG 1
IVG
Sbjct: 372 IVG 374
>ref|XP_010263262.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Nelumbo
nucifera]
Length = 474
Score = 536 bits (1382), Expect = e-150
Identities = 272/367 (74%), Positives = 306/367 (83%), Gaps = 8/367 (2%)
Frame = -3
Query: 1077 RTKKLWQALLPAVRHFSRVCRP---QAAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPA 907
R +++ +L VRH+SRV P +A VIRVSNN+A LG PKE PKPRQLLSLP FP
Sbjct: 2 RKYHVFRVILLTVRHYSRVSPPSPARATSVIRVSNNIARLGCPKEDPKPRQLLSLPPFPG 61
Query: 906 TPFPLPGKKTGSL-----RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQE 742
PLPGK + S+ VTAISWVK+YF DIPGPVIQSHFNKGL+++ C D E
Sbjct: 62 --HPLPGKSSVSVAGQSAHVTAISWVKYYFDDIPGPVIQSHFNKGLVKMACPNPGDLLME 119
Query: 741 KVPQMQHLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLV 562
+ QMQ L+K++ NEVME G +IY PVSV E KISKR+DTIP+ TLYPNADEIEYLQRLV
Sbjct: 120 EQGQMQSLKKISPNEVMEVGSRIYVPVSVIETKISKRFDTIPSGTLYPNADEIEYLQRLV 179
Query: 561 MYKDSAIIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLM 382
MYKDSAIIVLNKPPKLPVKG+LPVHNSMDALA AALSYGYE+GPKLVHRLDRESSGLLLM
Sbjct: 180 MYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAEAALSYGYEQGPKLVHRLDRESSGLLLM 239
Query: 381 GRTKESIARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKV 202
GRTKESIARLHWLFS++NKAKS + WNDACE T QRYWALVIGSP+EKQG I APLSKV
Sbjct: 240 GRTKESIARLHWLFSDVNKAKSPLKTWNDACETTTQRYWALVIGSPREKQGRICAPLSKV 299
Query: 201 LLNDGKTERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEA 22
LLNDGKTERVI+A+PSG++ SQEA T++RVLGP INGC+W+EL PLTGRKHQLRV CAEA
Sbjct: 300 LLNDGKTERVILANPSGVEASQEAITDFRVLGPMINGCTWIELCPLTGRKHQLRVHCAEA 359
Query: 21 LGTPIVG 1
LGTPIVG
Sbjct: 360 LGTPIVG 366
>ref|XP_002267010.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Vitis
vinifera]
Length = 479
Score = 530 bits (1365), Expect = e-148
Identities = 266/361 (73%), Positives = 306/361 (84%), Gaps = 8/361 (2%)
Frame = -3
Query: 1059 QALLPAVRHFSRVCRPQ---AAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLP 889
Q L P VRH+SR+ P+ AAPVIRVSNNVA LGSPKEGPKPRQLLSLP FPA PLP
Sbjct: 10 QGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPA--HPLP 67
Query: 888 GKKTGSL-----RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQ 724
GK ++ VTAISW+K+YF +IPG V+QSHFNKGL+ +E S +DS EK Q++
Sbjct: 68 GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127
Query: 723 HLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSA 544
LRK+ NEVMEAG +IY PVSVAEA+ISKR+DTIP+ TL+PNADEIEYLQRLV YKD A
Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLVTYKDPA 187
Query: 543 IIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKES 364
I+VLNKPPK+P+KG+LPVHNSMDALAAAAL++ YEEGPKLVHRLDRESSGLLLMGRTKES
Sbjct: 188 ILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTKES 247
Query: 363 IARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGK 184
+A LHWLFS++NKAKS + W+DACEAT QRYWALVIGSPK+K+G+I APLSKVLL+DGK
Sbjct: 248 VAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDDGK 307
Query: 183 TERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIV 4
TERVI+A+ SG++ SQEA TEYRVLGP INGCSW+EL P T RKHQLRV CAEALGTPIV
Sbjct: 308 TERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTPIV 367
Query: 3 G 1
G
Sbjct: 368 G 368
>ref|XP_008807168.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudouridine synthase 3,
mitochondrial [Phoenix dactylifera]
Length = 483
Score = 530 bits (1364), Expect = e-147
Identities = 272/363 (74%), Positives = 301/363 (82%), Gaps = 11/363 (3%)
Frame = -3
Query: 1056 ALLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPF-PLP 889
ALL VRH SR+ P+ A PVIRVSNNVA LG PKEGPKPRQLLSLP P + PLP
Sbjct: 12 ALLRTVRHLSRLAPPRPATAEPVIRVSNNVARLGEPKEGPKPRQLLSLPPSPXSHTNPLP 71
Query: 888 GKKTGSL-------RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQ 730
G+K R+TAI+WVKHYFADIP VIQSHF KGL+ +E S ++ Q
Sbjct: 72 GRKRDPAADPSKPRRITAITWVKHYFADIPPEVIQSHFRKGLVHVESSNRGVPLEKGHHQ 131
Query: 729 MQHLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKD 550
M L++V N+VME GMKI+ PVSVAE KI+KRYDTIPTATL+PNADEIEY++RLV YKD
Sbjct: 132 MHQLKRVKHNDVMEVGMKIHIPVSVAETKITKRYDTIPTATLHPNADEIEYIRRLVTYKD 191
Query: 549 SAIIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTK 370
SAIIVLNKPPK+PVKG+LPVHNSMD LAAAALSYG E+GPKLVHRLDRESSGLLLMGRTK
Sbjct: 192 SAIIVLNKPPKVPVKGNLPVHNSMDVLAAAALSYGNEQGPKLVHRLDRESSGLLLMGRTK 251
Query: 369 ESIARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLND 190
ES A+LHWLF+ +N AKSS Q WNDACEAT QRYWALVIG PKE++G+ISAPLSKVLLND
Sbjct: 252 ESFAQLHWLFTNINLAKSSSQTWNDACEATMQRYWALVIGCPKEREGLISAPLSKVLLND 311
Query: 189 GKTERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTP 10
GKTERVI+AHPSGIDGSQEA TEYRV+GPTINGCSWVEL PLTGRKHQLRV CAEALGTP
Sbjct: 312 GKTERVILAHPSGIDGSQEAVTEYRVMGPTINGCSWVELRPLTGRKHQLRVHCAEALGTP 371
Query: 9 IVG 1
IVG
Sbjct: 372 IVG 374
>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
Length = 481
Score = 521 bits (1341), Expect = e-145
Identities = 263/363 (72%), Positives = 306/363 (84%), Gaps = 10/363 (2%)
Frame = -3
Query: 1059 QALLPAVRHFSRVCRPQ---AAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLP 889
Q L P VRH+SR+ P+ AAPVIRVSNNVA LGSPKEGPKPRQLLSLP FPA PLP
Sbjct: 10 QGLFPVVRHYSRIAPPRPASAAPVIRVSNNVAQLGSPKEGPKPRQLLSLPPFPA--HPLP 67
Query: 888 GKKTGSL-----RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQ 724
GK ++ VTAISW+K+YF +IPG V+QSHFNKGL+ +E S +DS EK Q++
Sbjct: 68 GKSLVNVSGLPTHVTAISWIKYYFDEIPGSVVQSHFNKGLVHMERSNLDDSSLEKEGQIK 127
Query: 723 HLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRL--VMYKD 550
LRK+ NEVMEAG +IY PVSVAEA+ISKR+DTIP+ TL+PNADEIEYLQRL + ++D
Sbjct: 128 PLRKIKPNEVMEAGTRIYVPVSVAEARISKRFDTIPSGTLHPNADEIEYLQRLWLLKFQD 187
Query: 549 SAIIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTK 370
AI+VLNKPPK+P+KG+LPVHNSMDALAAAAL++ YEEGPKLVHRLDRESSGLLLMGRTK
Sbjct: 188 PAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGRTK 247
Query: 369 ESIARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLND 190
ES+A LHWLFS++NKAKS + W+DACEAT QRYWALVIGSPK+K+G+I APLSKVLL+D
Sbjct: 248 ESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSKVLLDD 307
Query: 189 GKTERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTP 10
GKTERVI+A+ SG++ SQEA TEYRVLGP INGCSW+EL P T RKHQLRV CAEALGTP
Sbjct: 308 GKTERVILANQSGLEASQEAITEYRVLGPMINGCSWIELCPRTSRKHQLRVHCAEALGTP 367
Query: 9 IVG 1
IVG
Sbjct: 368 IVG 370
>ref|XP_009401551.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Musa
acuminata subsp. malaccensis]
Length = 481
Score = 519 bits (1336), Expect = e-144
Identities = 265/361 (73%), Positives = 301/361 (83%), Gaps = 10/361 (2%)
Frame = -3
Query: 1053 LLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPF-PLPG 886
+L VR SR+ P A PVIRVSNNVA LG PKEGPKPRQLLSLP FP+T PLPG
Sbjct: 13 VLRVVRWLSRIAPPSPATAEPVIRVSNNVARLGKPKEGPKPRQLLSLPPFPSTGTDPLPG 72
Query: 885 KKTGSL------RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQ 724
+K RVTAISWVKHYFADIP VIQSHFNKGL+ +E S +D E+ M
Sbjct: 73 RKKDPAASGQPRRVTAISWVKHYFADIPPEVIQSHFNKGLVHVESSN-HDFQTEENYLMH 131
Query: 723 HLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSA 544
L+K+ N +ME GMKI+ PVS AE KI KRYDTIPTATL+PNADEIEY++RLV++KDSA
Sbjct: 132 CLKKIKHNHIMEPGMKIHLPVSAAETKIIKRYDTIPTATLHPNADEIEYIRRLVIHKDSA 191
Query: 543 IIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKES 364
IIVLNKPPK+P+KG+LPVHNSMD LAAAALSYG ++GPKLVHRLDRESSGLLL+GRTKES
Sbjct: 192 IIVLNKPPKVPMKGNLPVHNSMDILAAAALSYGSDQGPKLVHRLDRESSGLLLLGRTKES 251
Query: 363 IARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGK 184
+ RLHWLF+ +N AKSS +IWN+ACEAT QRYWALVIGSPKE++GIISAPL+KVLLN+GK
Sbjct: 252 LTRLHWLFTNVNLAKSSSEIWNNACEATTQRYWALVIGSPKEREGIISAPLTKVLLNNGK 311
Query: 183 TERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIV 4
ER+I+AHPSGIDGSQ+A TEYRV+GPTINGCSWVEL PLTGRKHQLRV CAEALGTPIV
Sbjct: 312 AERIILAHPSGIDGSQDAITEYRVMGPTINGCSWVELRPLTGRKHQLRVHCAEALGTPIV 371
Query: 3 G 1
G
Sbjct: 372 G 372
>ref|XP_007023655.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508779021|gb|EOY26277.1| Pseudouridine synthase family
protein [Theobroma cacao]
Length = 471
Score = 505 bits (1300), Expect = e-140
Identities = 251/358 (70%), Positives = 295/358 (82%), Gaps = 4/358 (1%)
Frame = -3
Query: 1062 WQALLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPL 892
WQ L VRH+SRV P A PV+RVSN+VA+LG+PK+GPKPRQLLSLP FP +PL
Sbjct: 8 WQ-FLSLVRHYSRVAPPPPAYADPVLRVSNSVAYLGAPKQGPKPRQLLSLPPFPG--YPL 64
Query: 891 PGKKTG-SLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLR 715
PGK G + RVTAISW+K+YF +IP IQSHFNKGL+Q+E S D+ E+ M+ LR
Sbjct: 65 PGKNPGGTARVTAISWLKYYFDEIPDSAIQSHFNKGLVQMESSNAGDTCIERDGLMKPLR 124
Query: 714 KVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIV 535
K+ NEVME G +++ PVS+AE +ISKR+D IP+ TLYPN DEI+YLQRLV YKD AI+V
Sbjct: 125 KIKHNEVMEVGTRVWVPVSIAETRISKRFDCIPSGTLYPNKDEIDYLQRLVKYKDYAILV 184
Query: 534 LNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIAR 355
LNKPPKLPVKG LPVHNSMDALAAAALSY ++EGPKLVHRLDRESSGLLLMGRTKES+A
Sbjct: 185 LNKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGRTKESVAH 244
Query: 354 LHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTER 175
LHWLF+++N KSSC+ WNDAC+ QR+WALVIG+PKEK+G+I APLSK+LL+DGKTER
Sbjct: 245 LHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSKILLDDGKTER 304
Query: 174 VIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
VI+A G++ SQEA TEYRVLGP INGCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 305 VILAQNVGLEASQEAITEYRVLGPMINGCSWIELRPLTSRKHQLRVHCAEALGTPIVG 362
>ref|XP_008677489.1| PREDICTED: uncharacterized protein LOC100381582 isoform X1 [Zea mays]
gi|413921570|gb|AFW61502.1| hypothetical protein
ZEAMMB73_778378 [Zea mays]
Length = 478
Score = 501 bits (1291), Expect = e-139
Identities = 245/353 (69%), Positives = 289/353 (81%), Gaps = 5/353 (1%)
Frame = -3
Query: 1044 AVRHFSRVCRPQAAP----VIRV-SNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKK 880
A+R SR+ P AP V+RV +NNVA LG+PK P+PRQLLSLP FPA PLPG+K
Sbjct: 17 ALRRLSRLAPPAPAPADPVVVRVDANNVARLGAPKPRPRPRQLLSLPPFPAGQDPLPGRK 76
Query: 879 TGSLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVTCN 700
RVTA+SWVKHYFAD+P +Q+HFN+ ++ EC S Q HL+K+ N
Sbjct: 77 VAPRRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSECYDHKVSADSIRTQKHHLKKIKHN 136
Query: 699 EVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNKPP 520
+ ME GM+I+ PVSVAE+ I KRY+TIPTATL+PN DEIEYL+RLV+Y+DSAI+VLNKPP
Sbjct: 137 DAMEPGMRIHLPVSVAESDIKKRYETIPTATLHPNKDEIEYLRRLVIYRDSAILVLNKPP 196
Query: 519 KLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHWLF 340
K+P+KGHLPVHNSMD LAAAALSYG EEGPKLVHRLDRESSGL+LMGRTKES RLHWL
Sbjct: 197 KVPMKGHLPVHNSMDVLAAAALSYGSEEGPKLVHRLDRESSGLILMGRTKESFTRLHWLL 256
Query: 339 SEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIMAH 160
+ +N A++S Q WN ACEA AQ+YWALVIG+PKE++G+ISAP+SKVLL+DGK ERVI+AH
Sbjct: 257 TSVNLARTSSQTWNKACEAYAQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAH 316
Query: 159 PSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
PSGIDG+QEA TEYRV+GPTINGCSW+EL PLTGRKHQLRV CAEALGTPIVG
Sbjct: 317 PSGIDGAQEAITEYRVMGPTINGCSWIELQPLTGRKHQLRVHCAEALGTPIVG 369
>ref|XP_004974856.2| PREDICTED: RNA pseudouridine synthase 3, mitochondrial, partial
[Setaria italica]
Length = 465
Score = 501 bits (1289), Expect = e-139
Identities = 243/353 (68%), Positives = 293/353 (83%), Gaps = 5/353 (1%)
Frame = -3
Query: 1044 AVRHFSRVCRPQAAP----VIRV-SNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKK 880
A+R SR+ P AP V+RV S+NVA LG+PK GP+PRQLLSLP FPA PLPG+K
Sbjct: 4 ALRRLSRLAPPTPAPADPVVVRVDSSNVARLGAPKPGPRPRQLLSLPPFPAGADPLPGRK 63
Query: 879 TGSLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVTCN 700
RVTA+SWVKHYFAD+P +Q+HFN+ ++ ECS S + Q HL+K+ N
Sbjct: 64 VVPRRVTAVSWVKHYFADVPQEAVQAHFNRRMVFSECSEHEFSAESIRTQKHHLKKIKHN 123
Query: 699 EVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNKPP 520
+VME GM+I+ PVSVAE +I KRY+TIPTATL+PN DEIEYL+RLV+++DS+I+VLNKPP
Sbjct: 124 DVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHRDSSILVLNKPP 183
Query: 519 KLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHWLF 340
K+P+KGHLPVHNSMD LAAAALSYG +EGPKLVHRLDRESSGL+LMGRTKES +LHWLF
Sbjct: 184 KVPMKGHLPVHNSMDVLAAAALSYGNKEGPKLVHRLDRESSGLILMGRTKESFTQLHWLF 243
Query: 339 SEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIMAH 160
+ +N A+++ Q WN ACEA Q+YWALVIG+PKE++G+ISAP+SKVLL+DGK ERVI+AH
Sbjct: 244 TSVNLARTTSQTWNKACEAYVQKYWALVIGTPKEREGVISAPISKVLLDDGKAERVILAH 303
Query: 159 PSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
PSGIDG+QEA TEYRV+GPTINGCSW+EL PLTGRKHQLRV CAEALGTPIVG
Sbjct: 304 PSGIDGAQEAITEYRVMGPTINGCSWIELRPLTGRKHQLRVHCAEALGTPIVG 356
>ref|XP_012092035.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Jatropha
curcas] gi|643704235|gb|KDP21299.1| hypothetical protein
JCGZ_21770 [Jatropha curcas]
Length = 462
Score = 501 bits (1289), Expect = e-139
Identities = 252/359 (70%), Positives = 291/359 (81%), Gaps = 8/359 (2%)
Frame = -3
Query: 1053 LLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGK 883
+L VR +SR+ P A PVIRVSNNVA+LGSPK+GPKPRQLLSLP FP PLPGK
Sbjct: 10 VLSKVRSYSRIAAPPPAYAQPVIRVSNNVAYLGSPKDGPKPRQLLSLPPFPG--LPLPGK 67
Query: 882 KTGSLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQH-----L 718
+ + RVTAISWVK+YF +IP VIQSHFN+GL+Q+EC MQH +
Sbjct: 68 TSVASRVTAISWVKYYFDEIPDSVIQSHFNRGLVQMEC-------------MQHGGETFM 114
Query: 717 RKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAII 538
RK+ ++VME G ++ PVSVAE +ISKR+DTIP+ TLYPNADEIEYLQRLV YKDSAII
Sbjct: 115 RKIKPSDVMEVGARVLIPVSVAETRISKRFDTIPSGTLYPNADEIEYLQRLVKYKDSAII 174
Query: 537 VLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIA 358
VLNKPPKLP+KG+LPVHNSMDALAAAAL+Y Y+EGPKLV RLDRESSGL+LMGRTKES+
Sbjct: 175 VLNKPPKLPIKGNLPVHNSMDALAAAALTYDYDEGPKLVQRLDRESSGLILMGRTKESVD 234
Query: 357 RLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTE 178
L W+FS+ K+ S C+ WNDAC+AT QRYWAL+IGSPKEK+G+I APLSKVLLNDGKTE
Sbjct: 235 HLQWMFSDQKKSNSYCKDWNDACQATCQRYWALIIGSPKEKEGLIRAPLSKVLLNDGKTE 294
Query: 177 RVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
R+++A SG + SQEA TEYRVLGPTINGCSWVEL PLT RKHQLRV CAEALGTPIVG
Sbjct: 295 RIVLAQNSGFEASQEALTEYRVLGPTINGCSWVELCPLTSRKHQLRVHCAEALGTPIVG 353
>ref|XP_012444478.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Gossypium
raimondii] gi|823223472|ref|XP_012444479.1| PREDICTED:
RNA pseudouridine synthase 3, mitochondrial [Gossypium
raimondii] gi|763789432|gb|KJB56428.1| hypothetical
protein B456_009G119600 [Gossypium raimondii]
Length = 472
Score = 499 bits (1285), Expect = e-138
Identities = 253/361 (70%), Positives = 295/361 (81%), Gaps = 5/361 (1%)
Frame = -3
Query: 1068 KLWQALLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPF 898
+L LL RH+SRV P A PVIRVSNNVA+LGSPK+GPKPRQLLSLP FP
Sbjct: 5 RLGHHLLSLARHYSRVAPPPPAYADPVIRVSNNVAYLGSPKQGPKPRQLLSLPPFPG--H 62
Query: 897 PLPGKKTGSLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFN--DSPQEKVPQMQ 724
LPGK + + RVTAISW+K+YF +I IQSHFNKGL+++E S N DS E+ QM+
Sbjct: 63 HLPGKNSATGRVTAISWLKYYFDEISDSAIQSHFNKGLVEIESSNPNAADSFIERDGQMK 122
Query: 723 HLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSA 544
LRK+ NEVME G +++ PVS+AE ++SKR+D IP+ TL+PNADEI+YL+RLV YKD A
Sbjct: 123 SLRKIKHNEVMEVGARVWVPVSIAETRVSKRFDCIPSGTLHPNADEIDYLRRLVKYKDYA 182
Query: 543 IIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKES 364
I+VLNKPPKLPVKG LPVHNSMDALAAAALSY Y+EGPKLVHRLDRESSGLLLMGRTKES
Sbjct: 183 ILVLNKPPKLPVKGSLPVHNSMDALAAAALSYYYDEGPKLVHRLDRESSGLLLMGRTKES 242
Query: 363 IARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGK 184
I LHWLF+++N AKSSC+ WNDAC+A QRYWALVIG+PKE +G+I +PLSK+LL+DGK
Sbjct: 243 INHLHWLFNDINPAKSSCKAWNDACDAKFQRYWALVIGTPKENEGLIRSPLSKILLDDGK 302
Query: 183 TERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIV 4
TERVI+A G++ SQEA TEYRVLGP INGCSWVEL PLT RKHQLRV CAEALGTPIV
Sbjct: 303 TERVILAQNVGLEPSQEAVTEYRVLGPMINGCSWVELRPLTSRKHQLRVHCAEALGTPIV 362
Query: 3 G 1
G
Sbjct: 363 G 363
>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 468
Score = 497 bits (1280), Expect = e-138
Identities = 250/349 (71%), Positives = 286/349 (81%), Gaps = 3/349 (0%)
Frame = -3
Query: 1038 RHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKKTGSL 868
R +SR+ P A PVIRVSNNVAHLGSPK+GPKPRQLLSLP FP PLPG+ + +
Sbjct: 15 RSYSRIAPPPPAYANPVIRVSNNVAHLGSPKDGPKPRQLLSLPPFPG--LPLPGRNSMAS 72
Query: 867 RVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVTCNEVME 688
VTAISWVK+YF +I IQSHFNKGL +EC N S + LRK+ N++ME
Sbjct: 73 HVTAISWVKYYFDEILDSAIQSHFNKGLAHIECP--NGSGSIEYGGQMSLRKIKHNDIME 130
Query: 687 AGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNKPPKLPV 508
AG +++ VSVAE +ISKR+DTIP+ TLYPNADEI+YLQRLV YKDSAIIVLNKPP+LPV
Sbjct: 131 AGARVHVAVSVAETRISKRFDTIPSGTLYPNADEIQYLQRLVKYKDSAIIVLNKPPRLPV 190
Query: 507 KGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHWLFSEMN 328
KG+LP+HNSMDALAAAALSY Y+EGPKLV RLDRESSGLLLMGRTKESI L WLFS++N
Sbjct: 191 KGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGRTKESIDHLQWLFSDVN 250
Query: 327 KAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIMAHPSGI 148
K+ S C+ WNDAC+AT QRYWALVIGSPKEK+G+I APLSKVLLNDGKTERV++A SG+
Sbjct: 251 KSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSKVLLNDGKTERVVLAQHSGL 310
Query: 147 DGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
+ SQEA TEYRVLGP INGCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 311 EASQEALTEYRVLGPRINGCSWIELRPLTSRKHQLRVHCAEALGTPIVG 359
>gb|KDO44461.1| hypothetical protein CISIN_1g042463mg, partial [Citrus sinensis]
Length = 490
Score = 493 bits (1268), Expect = e-136
Identities = 251/352 (71%), Positives = 290/352 (82%), Gaps = 2/352 (0%)
Frame = -3
Query: 1050 LPAVRHFSRVCRPQAAPVIRVSNN-VAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKKTG 874
L ++RH+SR+ P+ A VIRVS VAHLG PK GPKPRQLLSLP FP LPGK G
Sbjct: 45 LSSIRHYSRISPPRPA-VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPG--HNLPGKHWG 101
Query: 873 -SLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVTCNE 697
VTA+SWVK+YF ++ VIQSHFNKGL+Q+EC+ DS E+ QM+ +RK+ NE
Sbjct: 102 RQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQ-GQMKPIRKIKTNE 160
Query: 696 VMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNKPPK 517
VME G +I+ PVS+ E +ISKRYDTIP+ TL PNADEI+YL+RLV Y+DSAI+VLNKPPK
Sbjct: 161 VMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPK 220
Query: 516 LPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHWLFS 337
+P+KGHLPVHNSMDALAAAALSY Y EGPKLVHRLDRESSGLLLMGRTKES++ L WLFS
Sbjct: 221 VPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFS 280
Query: 336 EMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIMAHP 157
++NK+KS + WNDACEA QRYWALVIGSPKEKQGII APLSKVLL+DGKTER+I+A
Sbjct: 281 DVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQN 340
Query: 156 SGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
SG++ SQEA TEYRVLGP INGCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 341 SGLEASQEAMTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVG 392
>ref|XP_003572398.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Brachypodium
distachyon]
Length = 479
Score = 492 bits (1267), Expect = e-136
Identities = 249/359 (69%), Positives = 292/359 (81%), Gaps = 10/359 (2%)
Frame = -3
Query: 1047 PAVRH-FSRVCRPQ---AAPVIRVSN--NVAHLGSPKEGPKPRQLLSLPHFPATPFPLPG 886
PAVR SR+ P AAPV+RV + NVA LG+PK GP+PRQLLSLP FPA PLPG
Sbjct: 12 PAVRRRLSRLAPPAPAAAAPVVRVESGSNVARLGAPKPGPRPRQLLSLPPFPAGADPLPG 71
Query: 885 KKTG----SLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHL 718
+KT S RV+A+SWVKH FAD+P V+Q+HFNK + ECS S Q HL
Sbjct: 72 RKTAAAEASRRVSAVSWVKHCFADVPQEVVQAHFNKRQVFAECSDQEVSAVSIRSQEHHL 131
Query: 717 RKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAII 538
+K+ +EVME GM+I+ PVSVAEA+I KRY+TIP ATL+PN DEIEYL+RLV+YKDSAI+
Sbjct: 132 KKIKHSEVMEPGMRIHLPVSVAEAEIKKRYETIPAATLHPNKDEIEYLKRLVIYKDSAIL 191
Query: 537 VLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIA 358
VLNKPPK+P+KGHLPVHNSMD LAAAALSYG E+GPKLVHRLDR++SGLLLMGRTKES
Sbjct: 192 VLNKPPKVPMKGHLPVHNSMDVLAAAALSYGNEDGPKLVHRLDRDTSGLLLMGRTKESFT 251
Query: 357 RLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTE 178
RLHWLF+ + A+++ IWN ACE+ QRYWALVIG+PKE +G+ISAPL+KVLL+DGK E
Sbjct: 252 RLHWLFTSVKLARTASPIWNSACESYLQRYWALVIGTPKESEGVISAPLTKVLLDDGKAE 311
Query: 177 RVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
RVI+AHPSGIDG+QEA TEYRV+GPTINGCSW+EL PLTGRKHQLRV CAEALGTPIVG
Sbjct: 312 RVILAHPSGIDGAQEAVTEYRVMGPTINGCSWIELCPLTGRKHQLRVHCAEALGTPIVG 370
>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
gi|557538602|gb|ESR49646.1| hypothetical protein
CICLE_v10031422mg [Citrus clementina]
Length = 471
Score = 492 bits (1266), Expect = e-136
Identities = 251/352 (71%), Positives = 290/352 (82%), Gaps = 2/352 (0%)
Frame = -3
Query: 1050 LPAVRHFSRVCRPQAAPVIRVSNN-VAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKKTG 874
L ++RH+SR+ P+ A VIRVS VAHLG PK GPKPRQLLSLP FP LPGK G
Sbjct: 12 LSSIRHYSRISPPRPA-VIRVSEKKVAHLGPPKAGPKPRQLLSLPPFPG--HNLPGKHWG 68
Query: 873 -SLRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVTCNE 697
VTA+SWVK+YF ++ VIQSHFNKGL+Q+EC+ DS E+ QM+ +RK+ NE
Sbjct: 69 RQCHVTAVSWVKYYFDEVQDSVIQSHFNKGLVQMECANMGDSFVEQ-GQMKPIRKIKTNE 127
Query: 696 VMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNKPPK 517
VME G +I+ PVS+ E +ISKRYDTIP+ TL PNADEI+YL+RLV Y+DSAI+VLNKPPK
Sbjct: 128 VMEPGARIFLPVSMVEGRISKRYDTIPSGTLNPNADEIDYLRRLVKYRDSAILVLNKPPK 187
Query: 516 LPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHWLFS 337
+P+KGHLPVHNSMDALAAAALSY Y EGPKLVHRLDRESSGLLLMGRTKES++ L WLFS
Sbjct: 188 VPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRTKESVSLLTWLFS 247
Query: 336 EMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIMAHP 157
++NK+KS + WNDACEA QRYWALVIGSPKEKQGII APLSKVLL+DGKTER+I+A
Sbjct: 248 DVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSKVLLDDGKTERIILAQN 307
Query: 156 SGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
SG++ SQEA TEYRVLGP INGCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 308 SGLEASQEAVTEYRVLGPMINGCSWIELRPLTCRKHQLRVHCAEALGTPIVG 359
>ref|XP_007209989.1| hypothetical protein PRUPE_ppa005240mg [Prunus persica]
gi|462405724|gb|EMJ11188.1| hypothetical protein
PRUPE_ppa005240mg [Prunus persica]
Length = 471
Score = 492 bits (1266), Expect = e-136
Identities = 248/355 (69%), Positives = 289/355 (81%), Gaps = 7/355 (1%)
Frame = -3
Query: 1044 AVRHFSRVCRP---QAAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKKTG 874
A R +SRVC P A P+IRVSN+VA LG PKEGPKPRQLLSLP FP PLPGK++
Sbjct: 14 ARREYSRVCPPPAKSAGPLIRVSNHVARLGPPKEGPKPRQLLSLPPFPG--HPLPGKRSH 71
Query: 873 S----LRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVT 706
RVTA+SWVK+YF I IQSHF +GL+Q+EC G EK QM+ +RK+
Sbjct: 72 EGGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGMI----EKEGQMKPMRKIR 127
Query: 705 CNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNK 526
+EVME G ++Y PVSV E+++S+R+D IP+ TLYPNADEIEY+QR V YKDSAIIVLNK
Sbjct: 128 PSEVMEVGARVYVPVSVVESRVSRRFDCIPSGTLYPNADEIEYMQRRVKYKDSAIIVLNK 187
Query: 525 PPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHW 346
PPKLPVKG+LPVHNSMDALAAAALSYG +GPKLVHRLDRESSGL LMGRTKES++ L W
Sbjct: 188 PPKLPVKGNLPVHNSMDALAAAALSYGNNKGPKLVHRLDRESSGLHLMGRTKESVSLLQW 247
Query: 345 LFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIM 166
L+++ NK KSSCQ W+DACEA QRYWALVIGSPKEK+G+I APLSKVLL++GKTERVI+
Sbjct: 248 LYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVIL 307
Query: 165 AHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
AH SG++ SQ+A T+YRVLGPTINGCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 308 AHQSGLEASQKAITQYRVLGPTINGCSWIELRPLTSRKHQLRVHCAEALGTPIVG 362
>ref|XP_008239134.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial [Prunus mume]
Length = 471
Score = 491 bits (1263), Expect = e-136
Identities = 249/355 (70%), Positives = 289/355 (81%), Gaps = 7/355 (1%)
Frame = -3
Query: 1044 AVRHFSRVCRP---QAAPVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGKKTG 874
A R +SRVC P A +IRVSN+VA LG PKEGPKPRQLLSLP FP PLPGK++
Sbjct: 14 ARREYSRVCPPPAKSAGTLIRVSNHVARLGPPKEGPKPRQLLSLPPFPG--HPLPGKRSH 71
Query: 873 S----LRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKVT 706
RVTA+SWVK+YF I IQSHF +GL+Q+EC G EK QM+ +RK+
Sbjct: 72 EDGVVSRVTAVSWVKYYFDGIYDSTIQSHFKQGLVQMECPGLI----EKEGQMKPMRKIR 127
Query: 705 CNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLNK 526
+EVME G ++Y PVSVAE+++S+R+D IP+ TLYPNADEIEYLQR V YKDSAIIVLNK
Sbjct: 128 PSEVMEVGARVYVPVSVAESRVSRRFDCIPSGTLYPNADEIEYLQRRVKYKDSAIIVLNK 187
Query: 525 PPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLHW 346
PPKLPVKG+LPVHNSMDALAAAALSYG EGPKLVHRLDRESSGL LMGRTKES++ L W
Sbjct: 188 PPKLPVKGNLPVHNSMDALAAAALSYGNNEGPKLVHRLDRESSGLHLMGRTKESVSLLQW 247
Query: 345 LFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVIM 166
L+++ NK KSSCQ W+DACEA QRYWALVIGSPKEK+G+I APLSKVLL++GKTERVI+
Sbjct: 248 LYTDFNKGKSSCQAWDDACEARYQRYWALVIGSPKEKEGLICAPLSKVLLDNGKTERVIL 307
Query: 165 AHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
AH SG++ SQ+A T+YRVLGPTI+GCSW+EL PLT RKHQLRV CAEALGTPIVG
Sbjct: 308 AHQSGLEASQKAITQYRVLGPTIHGCSWIELRPLTSRKHQLRVHCAEALGTPIVG 362
>gb|EAZ43360.1| hypothetical protein OsJ_27960 [Oryza sativa Japonica Group]
Length = 509
Score = 491 bits (1263), Expect = e-136
Identities = 251/369 (68%), Positives = 292/369 (79%), Gaps = 8/369 (2%)
Frame = -3
Query: 1083 CSRTKKLWQALLPAVRHFSRVCRPQAAP----VIRVS-NNVAHLGSPKEGPKPRQLLSLP 919
C W A AVR SR+ P A V+RV +NVA LG PK GP+PRQLLSLP
Sbjct: 35 CCAAGGAWGA---AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLP 91
Query: 918 HFPA--TPFPLPGKKTGS-LRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSP 748
FP PLPG+K + RVTA+SWVKHY AD+P V+Q+HFNK L+ ECS S
Sbjct: 92 PFPGGGDGDPLPGRKAAAPRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSV 151
Query: 747 QEKVPQMQHLRKVTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQR 568
+ Q HL+K+ N+VME GM+I+ PVSVAE +I KRY+TIPTATL+PN DEIEYL+R
Sbjct: 152 ETIKSQKHHLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRR 211
Query: 567 LVMYKDSAIIVLNKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLL 388
LV++KDSAI+VLNKPPK+P+KG+LPVHNSMD LAAAALSYG EEGPKLVHRLDRESSGLL
Sbjct: 212 LVIHKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLL 271
Query: 387 LMGRTKESIARLHWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLS 208
L GRTKES RLHWLF+ +N AK++ Q+WN ACEA QRYWALVIG+PKE++GIISAPLS
Sbjct: 272 LFGRTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLS 331
Query: 207 KVLLNDGKTERVIMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCA 28
KVLL+DGK ERVI+AHPSGIDG+QEA T YRV+GPTI+GCSW+EL PLTGRKHQLRV CA
Sbjct: 332 KVLLDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCA 391
Query: 27 EALGTPIVG 1
EALGTPIVG
Sbjct: 392 EALGTPIVG 400
>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
X1 [Glycine max]
Length = 476
Score = 490 bits (1262), Expect = e-136
Identities = 245/357 (68%), Positives = 289/357 (80%), Gaps = 6/357 (1%)
Frame = -3
Query: 1053 LLPAVRHFSRVCRPQAA---PVIRVSNNVAHLGSPKEGPKPRQLLSLPHFPATPFPLPGK 883
LL RH+SR+ P+ PVI VSNN+A L +PKEGPKPRQLLSLP FP P P
Sbjct: 14 LLFVARHYSRIQPPRPVSVEPVISVSNNIARLDAPKEGPKPRQLLSLPPFPGHPLPDKSS 73
Query: 882 KTGSLR---VTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRK 712
+GS + VTA++W+K+YF G VI+SHF +GL+Q+E +DS +K QM+ +RK
Sbjct: 74 ISGSRQRDYVTAVNWIKYYFKGTWGSVIESHFREGLVQMEA---DDSSTQKEEQMKPMRK 130
Query: 711 VTCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVL 532
+ NEVM+ G +++ PVS+ E +ISKRYD IP+ TLYPNADEI+YLQRLV+YKDSAIIVL
Sbjct: 131 IRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRLVIYKDSAIIVL 190
Query: 531 NKPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARL 352
NKPPKLPVKG LPVHNSMDALAAAALSY Y+EGPKLVHRLDRESSG+LL+GRTK+S++ L
Sbjct: 191 NKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSVSHL 250
Query: 351 HWLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERV 172
WLFS +N AKSSC+ WN+ACEAT QRYWALVIG+PKEK+GII APLSKVLLNDGKTER+
Sbjct: 251 QWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKTERI 310
Query: 171 IMAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
I+AH S ++ QEA TEYRVLGP INGCSWVEL PLT RKHQLRV CAEALGTPIVG
Sbjct: 311 ILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVG 367
>ref|NP_001062265.1| Os08g0520100 [Oryza sativa Japonica Group]
gi|122234516|sp|Q0J4D4.1|PUS3_ORYSJ RecName: Full=RNA
pseudouridine synthase 3, mitochondrial; AltName:
Full=RNA pseudouridylate synthase 3; AltName:
Full=RNA-uridine isomerase 3; Flags: Precursor
gi|113624234|dbj|BAF24179.1| Os08g0520100 [Oryza sativa
Japonica Group] gi|125562210|gb|EAZ07658.1| hypothetical
protein OsI_29911 [Oryza sativa Indica Group]
Length = 475
Score = 490 bits (1262), Expect = e-136
Identities = 248/356 (69%), Positives = 289/356 (81%), Gaps = 8/356 (2%)
Frame = -3
Query: 1044 AVRHFSRVCRPQAAP----VIRVS-NNVAHLGSPKEGPKPRQLLSLPHFPA--TPFPLPG 886
AVR SR+ P A V+RV +NVA LG PK GP+PRQLLSLP FP PLPG
Sbjct: 11 AVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGDGDPLPG 70
Query: 885 KKTGS-LRVTAISWVKHYFADIPGPVIQSHFNKGLIQLECSGFNDSPQEKVPQMQHLRKV 709
+K + RVTA+SWVKHY AD+P V+Q+HFNK L+ ECS S + Q HL+K+
Sbjct: 71 RKAAAPRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETIKSQKHHLKKI 130
Query: 708 TCNEVMEAGMKIYAPVSVAEAKISKRYDTIPTATLYPNADEIEYLQRLVMYKDSAIIVLN 529
N+VME GM+I+ PVSVAE +I KRY+TIPTATL+PN DEIEYL+RLV++KDSAI+VLN
Sbjct: 131 KHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVIHKDSAILVLN 190
Query: 528 KPPKLPVKGHLPVHNSMDALAAAALSYGYEEGPKLVHRLDRESSGLLLMGRTKESIARLH 349
KPPK+P+KG+LPVHNSMD LAAAALSYG EEGPKLVHRLDRESSGLLL GRTKES RLH
Sbjct: 191 KPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFGRTKESFTRLH 250
Query: 348 WLFSEMNKAKSSCQIWNDACEATAQRYWALVIGSPKEKQGIISAPLSKVLLNDGKTERVI 169
WLF+ +N AK++ Q+WN ACEA QRYWALVIG+PKE++GIISAPLSKVLL+DGK ERVI
Sbjct: 251 WLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVLLDDGKAERVI 310
Query: 168 MAHPSGIDGSQEARTEYRVLGPTINGCSWVELHPLTGRKHQLRVLCAEALGTPIVG 1
+AHPSGIDG+QEA T YRV+GPTI+GCSW+EL PLTGRKHQLRV CAEALGTPIVG
Sbjct: 311 LAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEALGTPIVG 366