BLASTX nr result

ID: Cinnamomum23_contig00010941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00010941
         (317 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containi...    80   7e-13
emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]    80   7e-13
ref|XP_008786549.1| PREDICTED: pentatricopeptide repeat-containi...    78   2e-12
ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-12
gb|KEH32829.1| pentatricopeptide (PPR) repeat protein [Medicago ...    75   1e-11
ref|XP_009393799.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_012570984.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_010244051.1| PREDICTED: pentatricopeptide repeat-containi...    68   3e-09
ref|XP_010097008.1| hypothetical protein L484_024932 [Morus nota...    67   4e-09
ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Popu...    67   4e-09
ref|XP_011007577.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_010648293.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
ref|XP_012087643.1| PREDICTED: pentatricopeptide repeat-containi...    67   5e-09
emb|CBI20594.3| unnamed protein product [Vitis vinifera]               67   5e-09
ref|XP_009402221.1| PREDICTED: putative pentatricopeptide repeat...    65   2e-08
gb|EMT33270.1| Pentatricopeptide repeat-containing protein [Aegi...    65   2e-08
ref|XP_011620822.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_010920669.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_010237844.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08
ref|XP_004303223.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08

>ref|XP_002274999.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780
           [Vitis vinifera] gi|296088567|emb|CBI37558.3| unnamed
           protein product [Vitis vinifera]
          Length = 492

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 35/60 (58%), Positives = 47/60 (78%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLPEGY 136
           S+ R +MRELGLVKTPGCSWI + GRVH+FYQ D+SHP    IYE L+ +  +++LP+G+
Sbjct: 432 SRTRAKMRELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETLHGIVNILMLPKGW 491


>emb|CAN71191.1| hypothetical protein VITISV_019119 [Vitis vinifera]
          Length = 880

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 35/60 (58%), Positives = 47/60 (78%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLPEGY 136
           S+ R +MRELGLVKTPGCSWI + GRVH+FYQ D+SHP    IYE L+ +  +++LP+G+
Sbjct: 820 SRTRAKMRELGLVKTPGCSWITVAGRVHKFYQEDLSHPETQMIYETLHGIVNILMLPKGW 879


>ref|XP_008786549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Phoenix dactylifera]
          Length = 446

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 33/62 (53%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMV-LPEG 139
           ++MR RMRE G+VKTPGCSW+++KGR+H FYQG + HP  N+I+E+L+ L+ +M    +G
Sbjct: 385 AQMRSRMREFGMVKTPGCSWVDVKGRLHAFYQGGVPHPSANRIHELLDTLTKVMTNSDDG 444

Query: 138 YG 133
           +G
Sbjct: 445 HG 446


>ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Elaeis guineensis]
          Length = 499

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 32/54 (59%), Positives = 45/54 (83%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MM 154
           ++MR RMRE G+VK PGCSWI++KGR+H FYQG +SHP+  +I E+L++L+ MM
Sbjct: 438 AQMRSRMREFGMVKIPGCSWIDVKGRMHVFYQGSVSHPLAKRINEVLDVLAKMM 491


>gb|KEH32829.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 505

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 33/54 (61%), Positives = 43/54 (79%), Gaps = 4/54 (7%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKN----KIYEILNLL 166
           S +R +MR+LGLVKTPGCSWIN+ GR H+FYQGD+SHP+ +    ++YEI N L
Sbjct: 430 STIRGKMRDLGLVKTPGCSWINIAGRAHKFYQGDLSHPLSHIICKRVYEISNTL 483


>ref|XP_009393799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
           gi|695013994|ref|XP_009393800.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
          Length = 501

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 35/66 (53%), Positives = 47/66 (71%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLPEGY 136
           +K+R RM+EL +VKTPGCSWI++KGR+  FYQGD+SHP    I+E+LN L+  M      
Sbjct: 436 AKVRVRMKELEMVKTPGCSWIDVKGRLQAFYQGDVSHPSVKHIHEMLNWLTQTMTTSTMV 495

Query: 135 G*LNWH 118
             L+WH
Sbjct: 496 D-LDWH 500


>ref|XP_012570984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310120|ref|XP_012570985.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310122|ref|XP_012570986.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310124|ref|XP_012570987.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310126|ref|XP_012570988.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310128|ref|XP_012570989.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
           gi|828310130|ref|XP_012570990.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Cicer arietinum]
          Length = 498

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLPEGY 136
           S +R +MR+LGL+KTPGCSWIN  GR H+FYQGD+SHP+ + I +IL  +S   +  +  
Sbjct: 430 STVRAKMRDLGLIKTPGCSWINTAGRAHKFYQGDLSHPLSDMICKILYEISNTQISTDDL 489

Query: 135 G 133
           G
Sbjct: 490 G 490


>ref|XP_010244051.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Nelumbo nucifera]
          Length = 492

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = -3

Query: 312 KMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLP 145
           K+R RMRELGL K+PGCSW+ ++GRV RFYQGD+SH       E L  +   M+LP
Sbjct: 433 KIRSRMRELGLTKSPGCSWVTIEGRVRRFYQGDLSHRWVKITCETLERIIRTMMLP 488


>ref|XP_010097008.1| hypothetical protein L484_024932 [Morus notabilis]
           gi|587877600|gb|EXB66635.1| hypothetical protein
           L484_024932 [Morus notabilis]
          Length = 496

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILN 172
           S +R +M++LGLVKTPGCSWI + G +H+FYQGD SHP+   IYE L+
Sbjct: 433 SFIRAKMKDLGLVKTPGCSWIIISGTLHKFYQGDHSHPLSVLIYETLD 480


>ref|XP_002306238.1| hypothetical protein POPTR_0005s06190g [Populus trichocarpa]
           gi|222855687|gb|EEE93234.1| hypothetical protein
           POPTR_0005s06190g [Populus trichocarpa]
          Length = 512

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 30/55 (54%), Positives = 40/55 (72%)
 Frame = -3

Query: 306 RKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLPE 142
           R +MRELGL KTPGCSWI + G VH+FYQG  SHP+     EIL+ +  +++LP+
Sbjct: 435 RAKMRELGLAKTPGCSWITIAGTVHKFYQGCHSHPLTKVTCEILDRMIKVLMLPD 489


>ref|XP_011007577.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Populus euphratica]
           gi|743926806|ref|XP_011007578.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Populus euphratica]
          Length = 506

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = -3

Query: 306 RKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLP 145
           R +MRELGL KTPGCSWI + G VH+FYQG  SHP+     EIL+ +  +++LP
Sbjct: 435 RAKMRELGLAKTPGCSWITIAGTVHKFYQGCHSHPLTKVTCEILDRMIKLLMLP 488


>ref|XP_010648293.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Vitis vinifera]
          Length = 628

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVL 148
           +K R RMRE G++KTPGCSWI +   VH F+ GD+SHP  NKIY ++  L   M L
Sbjct: 479 AKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKL 534


>ref|XP_012087643.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Jatropha curcas]
           gi|643710864|gb|KDP24783.1| hypothetical protein
           JCGZ_25404 [Jatropha curcas]
          Length = 494

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = -3

Query: 312 KMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVLP 145
           ++R RMRELGLVKTPGCSWI + G + +FYQGD SH   N I + L+ +  +M LP
Sbjct: 433 RIRTRMRELGLVKTPGCSWITIAGTICKFYQGDNSHTQTNLICDTLDHMIKVMALP 488


>emb|CBI20594.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 30/56 (53%), Positives = 38/56 (67%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVL 148
           +K R RMRE G++KTPGCSWI +   VH F+ GD+SHP  NKIY ++  L   M L
Sbjct: 419 AKCRLRMRENGVLKTPGCSWIEVDNTVHEFFMGDLSHPESNKIYSMIRELMWKMKL 474


>ref|XP_009402221.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820 [Musa acuminata subsp. malaccensis]
          Length = 696

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 27/50 (54%), Positives = 38/50 (76%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLL 166
           +++R  M+E G+ KTPGCSW+ +KG VH F+ GDISHP+ N+IY  L+ L
Sbjct: 547 ARLRLVMKEKGIQKTPGCSWVELKGVVHEFHVGDISHPLSNEIYSKLDEL 596


>gb|EMT33270.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 419

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = -3

Query: 309 MRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLL 166
           +R RMRELG+VKTPGCSW+++KGR H FYQG I   ++ +++ IL+ L
Sbjct: 366 LRLRMRELGMVKTPGCSWVDVKGRAHAFYQGSIPSYLRRRMFWILDRL 413


>ref|XP_011620822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Amborella trichopoda]
          Length = 468

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = -3

Query: 306 RKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILN 172
           R RMRE G+VKTPGCSWI +   VH F+ GD SHP   +IYE++N
Sbjct: 321 RLRMREKGVVKTPGCSWIEVDNMVHEFFMGDRSHPDSGRIYEMVN 365


>ref|XP_010920669.1| PREDICTED: pentatricopeptide repeat-containing protein ELI1,
           chloroplastic-like [Elaeis guineensis]
          Length = 626

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 29/56 (51%), Positives = 37/56 (66%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLLS*MMVL 148
           +K R RMRE  +VK PGCSWI +  RV+ F+ GD SHP   KIY ++N L+  M L
Sbjct: 477 AKCRLRMREKRVVKMPGCSWIEVDNRVYEFFMGDRSHPQSEKIYSMINALNLRMKL 532


>ref|XP_010237844.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
           gi|721677978|ref|XP_003576175.2| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 434

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 26/48 (54%), Positives = 38/48 (79%)
 Frame = -3

Query: 309 MRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLL 166
           +R RMRELG+VKTPGCSW+++KGR + FYQG I   ++ +++ IL+ L
Sbjct: 366 LRSRMRELGMVKTPGCSWVDVKGRAYAFYQGSIPRYLRRQMFWILDRL 413


>ref|XP_004303223.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
           [Fragaria vesca subsp. vesca]
          Length = 857

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -3

Query: 315 SKMRKRMRELGLVKTPGCSWINMKGRVHRFYQGDISHPMKNKIYEILNLL 166
           SKMR+RMR  G+ K PGCSWI +K  VH F+ GD +HP   ++YE L+LL
Sbjct: 785 SKMRRRMRYDGMKKEPGCSWIEVKDEVHAFFVGDKAHPRSTELYERLDLL 834


Top