BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00009203
         (1560 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010258585.1| PREDICTED: RNA polymerase II subunit 5-media...   280   2e-72
ref|XP_011029039.1| PREDICTED: RNA polymerase II subunit 5-media...   245   6e-62
ref|XP_011029038.1| PREDICTED: RNA polymerase II subunit 5-media...   243   2e-61
ref|XP_011029036.1| PREDICTED: RNA polymerase II subunit 5-media...   243   3e-61
ref|XP_011029037.1| PREDICTED: RNA polymerase II subunit 5-media...   241   1e-60
ref|XP_010656985.1| PREDICTED: RNA polymerase II subunit 5-media...   234   1e-58
ref|XP_010656984.1| PREDICTED: RNA polymerase II subunit 5-media...   234   1e-58
gb|KGN46728.1| hypothetical protein Csa_6G127400 [Cucumis sativus]    229   3e-57
ref|XP_004139947.1| PREDICTED: RNA polymerase II subunit 5-media...   229   3e-57
ref|XP_012088258.1| PREDICTED: RNA polymerase II subunit 5-media...   228   8e-57
ref|XP_009395177.1| PREDICTED: RNA polymerase II subunit 5-media...   228   8e-57
ref|XP_012088257.1| PREDICTED: RNA polymerase II subunit 5-media...   228   1e-56
ref|XP_006447280.1| hypothetical protein CICLE_v10015278mg [Citr...   228   1e-56
emb|CBI21871.3| unnamed protein product [Vitis vinifera]              226   3e-56
ref|XP_006469883.1| PREDICTED: RNA polymerase II subunit 5-media...   226   3e-56
ref|XP_011465595.1| PREDICTED: RNA polymerase II subunit 5-media...   226   4e-56
ref|XP_011626665.1| PREDICTED: RNA polymerase II subunit 5-media...   225   8e-56
gb|KHN28114.1| RNA polymerase II subunit 5-mediating protein lik...   224   1e-55
ref|XP_004300695.1| PREDICTED: RNA polymerase II subunit 5-media...   224   1e-55
ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-media...   224   1e-55

>ref|XP_010258585.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Nelumbo nucifera]
            gi|720008300|ref|XP_010258586.1| PREDICTED: RNA
            polymerase II subunit 5-mediating protein homolog isoform
            X1 [Nelumbo nucifera] gi|720008303|ref|XP_010258587.1|
            PREDICTED: RNA polymerase II subunit 5-mediating protein
            homolog isoform X1 [Nelumbo nucifera]
            gi|720008306|ref|XP_010258588.1| PREDICTED: RNA
            polymerase II subunit 5-mediating protein homolog isoform
            X1 [Nelumbo nucifera] gi|720008310|ref|XP_010258589.1|
            PREDICTED: RNA polymerase II subunit 5-mediating protein
            homolog isoform X1 [Nelumbo nucifera]
          Length = 403

 Score =  280 bits (716), Expect = 2e-72
 Identities = 181/418 (43%), Positives = 242/418 (57%), Gaps = 27/418 (6%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M +GV KGT+  L+S+  VEEAQKAAKRV +AI +R+KE  ++  FI++N NL  LV  L
Sbjct: 3    MEEGV-KGTITSLSSIFPVEEAQKAAKRVQDAIADRQKELEHLHSFISDNINLVNLVQKL 61

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            PD+L H +MVPFGKAAFFPGRL+H+NEFLVLLG+GYYA++T +QT EIL RRGK LES++
Sbjct: 62   PDELFHDVMVPFGKAAFFPGRLVHSNEFLVLLGEGYYAERTCKQTIEILQRRGKFLESQV 121

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN------- 613
            ESLKA ++DL+              +GLVEIREDY+EE P EK  +SGLSKP+       
Sbjct: 122  ESLKANLMDLKAEASFFDATAAEAAEGLVEIREDYVEENPAEKMPKSGLSKPDSSEAENV 181

Query: 614  -IIPDDEECAQAMSRMDALEKLEEEACSDDEDN------DFECS-------SMFSGLKLN 751
             ++ +DEE A+ MSR+D LEK E  A S +ED+      DF CS         F  L+L 
Sbjct: 182  KLVAEDEEYARIMSRLDELEKEELAAQSANEDDDEEAETDFGCSINQESFDDHFKSLELR 241

Query: 752  DRVQKFMDEYRFSAASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGN 931
             +V +   +   + A+  P  GN  +   S+      P   +F+ +K H V +       
Sbjct: 242  SQVLQSKVKTPITTATKEPLGGNFLKQDSSDHP----PLKVQFEDSKIHYVPK------- 290

Query: 932  DMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIE--KVPTVHHSKKEKDFGDNVGDRPAV 1105
               A  M KS    KPL +S  K   A S S IE  K   + H +   ++    GD  ++
Sbjct: 291  ---AYNMEKSEAFGKPLSVSKEKIHAA-SVSTIEGFKDTVIGHPEVTANYKKVSGDTSSL 346

Query: 1106 NRA----DHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQKGGR 1267
            + +    D  KAFTGSI+EH++    KP             + P+KPVSRFKMQKGGR
Sbjct: 347  SGSKTSFDSSKAFTGSIIEHAYNSQTKPA-EQTVTSSQSTCSRPTKPVSRFKMQKGGR 403


>ref|XP_011029039.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X4 [Populus euphratica]
          Length = 384

 Score =  245 bits (626), Expect = 6e-62
 Identities = 163/396 (41%), Positives = 218/396 (55%), Gaps = 14/396 (3%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV P AS+    EAQKAAKRV E I E++KE   I+ F+TEN NL  LV  LPD+L+H
Sbjct: 9    KGTVTPFASMFPANEAQKAAKRVEEKIGEKQKELDCIKEFVTENTNLINLVSRLPDELNH 68

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRLIHTNEF+VLLGDGYYA++T++QT EIL RRGK L+S++ESL A 
Sbjct: 69   DIMVPFGKAAFFPGRLIHTNEFMVLLGDGYYAERTAKQTVEILARRGKALDSQIESLMAN 128

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEK--KSESGLSKPNIIPDDEECAQA 646
            M DL+              +GLVEIREDY+EE   EK  KS+   +   +  +D+E A+ 
Sbjct: 129  MKDLKAEASFFDVTASEAAEGLVEIREDYVEENSREKHSKSDDKNNDEKVASEDDEYARI 188

Query: 647  MSRMDALEKLE---EEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLGPSSG 817
            MSR+D LEK E   E+  +D ED+D          + ND  +  MDE   +A S   +S 
Sbjct: 189  MSRLDELEKEELEAEDEEADAEDDDESAVEQPDAAENND--ESDMDEQTDAAES---NSE 243

Query: 818  NCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESP----CGNDMSASGMVKSNVTE-KPL 982
            N   T P            KF+     + +E   P        +S   + + ++T+   +
Sbjct: 244  NHDNTQPKA----------KFNQFPHQIHSEIRKPLQQTTAEALSNKYLPQQSITDTSNV 293

Query: 983  FLSTSKEGCADSG----SKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSIVE 1150
             + T K G   S     S  E   TV  +  ++    +   +PA    D  KAFTGS+VE
Sbjct: 294  LMQTPKSGFNSSKAFTCSIAESAETVSRNSGQQAVTSSQASKPAF---DSSKAFTGSVVE 350

Query: 1151 HSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
             ++ +   PT            + PSKPVSRFKM++
Sbjct: 351  RTYNL---PTSGQDAISSQSSSSQPSKPVSRFKMRR 383


>ref|XP_011029038.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X3 [Populus euphratica]
          Length = 394

 Score =  243 bits (621), Expect = 2e-61
 Identities = 163/403 (40%), Positives = 219/403 (54%), Gaps = 21/403 (5%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV P AS+    EAQKAAKRV E I E++KE   I+ F+TEN NL  LV  LPD+L+H
Sbjct: 9    KGTVTPFASMFPANEAQKAAKRVEEKIGEKQKELDCIKEFVTENTNLINLVSRLPDELNH 68

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRLIHTNEF+VLLGDGYYA++T++QT EIL RRGK L+S++ESL A 
Sbjct: 69   DIMVPFGKAAFFPGRLIHTNEFMVLLGDGYYAERTAKQTVEILARRGKALDSQIESLMAN 128

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEK--KSESGLSKPNIIPDDEECAQA 646
            M DL+              +GLVEIREDY+EE   EK  KS+   +   +  +D+E A+ 
Sbjct: 129  MKDLKAEASFFDVTASEAAEGLVEIREDYVEENSREKHSKSDDKNNDEKVASEDDEYARI 188

Query: 647  MSRMDALEKLE---EEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLGPSSG 817
            MSR+D LEK E   E+  +D ED+D          + ND  +  MDE   +A S   +S 
Sbjct: 189  MSRLDELEKEELEAEDEEADAEDDDESAVEQPDAAENND--ESDMDEQTDAAES---NSE 243

Query: 818  NCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESP----CGNDMSASGMVKSNVTE-KPL 982
            N   T P            KF+     + +E   P        +S   + + ++T+   +
Sbjct: 244  NHDNTQPKA----------KFNQFPHQIHSEIRKPLQQTTAEALSNKYLPQQSITDTSNV 293

Query: 983  FLSTSKEGCADSG----SKIEKVPTVHHSKKEKDFGDNVGDRPAVNRA-------DHQKA 1129
             + T K G   S     S  E   TV  +  ++    +    PA + +       D  KA
Sbjct: 294  LMQTPKSGFNSSKAFTCSIAESAETVSRNSGQQAVTSSQASEPAFDSSKASKPAFDSSKA 353

Query: 1130 FTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            FTGS+VE ++ +   PT            + PSKPVSRFKM++
Sbjct: 354  FTGSVVERTYNL---PTSGQDAISSQSSSSQPSKPVSRFKMRR 393


>ref|XP_011029036.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Populus euphratica]
          Length = 420

 Score =  243 bits (620), Expect = 3e-61
 Identities = 167/424 (39%), Positives = 226/424 (53%), Gaps = 42/424 (9%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV P AS+    EAQKAAKRV E I E++KE   I+ F+TEN NL  LV  LPD+L+H
Sbjct: 9    KGTVTPFASMFPANEAQKAAKRVEEKIGEKQKELDCIKEFVTENTNLINLVSRLPDELNH 68

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRLIHTNEF+VLLGDGYYA++T++QT EIL RRGK L+S++ESL A 
Sbjct: 69   DIMVPFGKAAFFPGRLIHTNEFMVLLGDGYYAERTAKQTVEILARRGKALDSQIESLMAN 128

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEK--KSESGLSKPNIIPDDEECAQA 646
            M DL+              +GLVEIREDY+EE   EK  KS+   +   +  +D+E A+ 
Sbjct: 129  MKDLKAEASFFDVTASEAAEGLVEIREDYVEENSREKHSKSDDKNNDEKVASEDDEYARI 188

Query: 647  MSRMDALEKLEEEAC---SDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLGPSSG 817
            MSR+D LEK E EA    +D ED+D          + ND  +  MDE   +A S   +  
Sbjct: 189  MSRLDELEKEELEAEDEEADAEDDDESAVEQPDAAENND--ESDMDEQTDAAESNSENHD 246

Query: 818  NCT---------------------QTS---------PSETSTRTNPDLYK-----FDGAK 892
            N                       QT+         P ++ T T+  L +     F+ +K
Sbjct: 247  NTQPKAKFNQFPHQIHSEIRKPLQQTTAEALSNKYLPQQSITDTSNVLMQTPKSGFNSSK 306

Query: 893  AHL--VAEDESPCGNDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKE 1066
            A    +AE       +     +  S  +E P F S+     A  GS +E+   +  + ++
Sbjct: 307  AFTCSIAESAETVSRNSGQQAVTSSQASE-PAFDSSK----AIIGSTVERADIIPKNSQQ 361

Query: 1067 KDFGDNVGDRPAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRF 1246
            +    +   +PA    D  KAFTGS+VE ++ +   PT            + PSKPVSRF
Sbjct: 362  QAATSSQASKPAF---DSSKAFTGSVVERTYNL---PTSGQDAISSQSSSSQPSKPVSRF 415

Query: 1247 KMQK 1258
            KM++
Sbjct: 416  KMRR 419


>ref|XP_011029037.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X2 [Populus euphratica]
          Length = 410

 Score =  241 bits (615), Expect = 1e-60
 Identities = 163/414 (39%), Positives = 223/414 (53%), Gaps = 32/414 (7%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV P AS+    EAQKAAKRV E I E++KE   I+ F+TEN NL  LV  LPD+L+H
Sbjct: 9    KGTVTPFASMFPANEAQKAAKRVEEKIGEKQKELDCIKEFVTENTNLINLVSRLPDELNH 68

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRLIHTNEF+VLLGDGYYA++T++QT EIL RRGK L+S++ESL A 
Sbjct: 69   DIMVPFGKAAFFPGRLIHTNEFMVLLGDGYYAERTAKQTVEILARRGKALDSQIESLMAN 128

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEK--KSESGLSKPNIIPDDEECAQA 646
            M DL+              +GLVEIREDY+EE   EK  KS+   +   +  +D+E A+ 
Sbjct: 129  MKDLKAEASFFDVTASEAAEGLVEIREDYVEENSREKHSKSDDKNNDEKVASEDDEYARI 188

Query: 647  MSRMDALEKLEEEAC---SDDEDNDFECSSMFSGLKLNDRVQKFMDE------------- 778
            MSR+D LEK E EA    +D ED+D          + ND  +  MDE             
Sbjct: 189  MSRLDELEKEELEAEDEEADAEDDDESAVEQPDAAENND--ESDMDENHDNTQPKAKFNQ 246

Query: 779  --YRFSAASLGPSSGNCTQTS-----PSETSTRTNPDLYK-----FDGAKAHL--VAEDE 916
              ++  +    P      +       P ++ T T+  L +     F+ +KA    +AE  
Sbjct: 247  FPHQIHSEIRKPLQQTTAEALSNKYLPQQSITDTSNVLMQTPKSGFNSSKAFTCSIAESA 306

Query: 917  SPCGNDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDR 1096
                 +     +  S  +E P F S+     A  GS +E+   +  + +++    +   +
Sbjct: 307  ETVSRNSGQQAVTSSQASE-PAFDSSK----AIIGSTVERADIIPKNSQQQAATSSQASK 361

Query: 1097 PAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            PA    D  KAFTGS+VE ++ +   PT            + PSKPVSRFKM++
Sbjct: 362  PAF---DSSKAFTGSVVERTYNL---PTSGQDAISSQSSSSQPSKPVSRFKMRR 409


>ref|XP_010656985.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X2 [Vitis vinifera]
          Length = 383

 Score =  234 bits (598), Expect = 1e-58
 Identities = 160/398 (40%), Positives = 210/398 (52%), Gaps = 16/398 (4%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV PLASL   EEAQKA+KRV +A+ +R+ E   ++ FI +N  L  LV  LPD+L H
Sbjct: 6    KGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLPDELHH 65

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRL+HTNEFLVLLG+GYYA++TS+QT EIL RRGK LES+++SLKAM
Sbjct: 66   DIMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGKALESQVDSLKAM 125

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN-----------II 619
            M DL+              +GLVEIREDY+EE  +E+  E G  KP+           + 
Sbjct: 126  MKDLKAEVSFFDATAAEAVEGLVEIREDYVEESSSERVIERGPPKPDSPRFSGEDSMKVA 185

Query: 620  PDDEECAQAMSRMDALEKLEEEACS-----DDEDNDFECSSMFSGLKLNDRVQKFMDEYR 784
             +DEE A+ M R D LEK E  A S     +DE N+ +     S L   D V   ++E R
Sbjct: 186  AEDEEYARMMLRFDELEKEELAAGSGDEHDEDEHNEADVDHSLSQLS-GDHVLGSLEE-R 243

Query: 785  FSAASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSN 964
                 L  S      T    +      D      +K  L           +    + K +
Sbjct: 244  QVRKPLHHSKDEYATTEELLSKQHFEEDFANQLKSKIQL---------EGLKEQSVPKDD 294

Query: 965  VTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSI 1144
            V+    F + + +  +     I+ +PT   SK E     +   +PA    D  KAFTGSI
Sbjct: 295  VSHGKSFANRATQSSSHGKDNIQALPT---SKAETSVQSS---KPAT---DSLKAFTGSI 345

Query: 1145 VEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            VEH+  +   P             + P+KPVSRFKMQ+
Sbjct: 346  VEHTRNIQMNP-REQAASSSQSSGSQPTKPVSRFKMQR 382


>ref|XP_010656984.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Vitis vinifera]
          Length = 385

 Score =  234 bits (597), Expect = 1e-58
 Identities = 161/398 (40%), Positives = 209/398 (52%), Gaps = 16/398 (4%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV PLASL   EEAQKA+KRV +A+ +R+ E   ++ FI +N  L  LV  LPD+L H
Sbjct: 6    KGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLPDELHH 65

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRL+HTNEFLVLLG+GYYA++TS+QT EIL RRGK LES+++SLKAM
Sbjct: 66   DIMVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGKALESQVDSLKAM 125

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN-----------II 619
            M DL+              +GLVEIREDY+EE  +E+  E G  KP+           + 
Sbjct: 126  MKDLKAEVSFFDATAAEAVEGLVEIREDYVEESSSERVIERGPPKPDSPRFSGEDSMKVA 185

Query: 620  PDDEECAQAMSRMDALEKLEEEACS-----DDEDNDFECSSMFSGLKLNDRVQKFMDEYR 784
             +DEE A+ M R D LEK E  A S     +DE N+ +     S L   D V   ++E R
Sbjct: 186  AEDEEYARMMLRFDELEKEELAAGSGDEHDEDEHNEADVDHSLSQLS-GDHVLGSLEE-R 243

Query: 785  FSAASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSN 964
                 L  S      T    +      D      +K  L    E     D         +
Sbjct: 244  QVRKPLHHSKDEYATTEELLSKQHFEEDFANQLKSKIQLEGLKEQSVPKD-------SDD 296

Query: 965  VTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSI 1144
            V+    F + + +  +     I+ +PT   SK E     +   +PA    D  KAFTGSI
Sbjct: 297  VSHGKSFANRATQSSSHGKDNIQALPT---SKAETSVQSS---KPA---TDSLKAFTGSI 347

Query: 1145 VEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            VEH+  +   P             + P+KPVSRFKMQ+
Sbjct: 348  VEHTRNIQMNP-REQAASSSQSSGSQPTKPVSRFKMQR 384


>gb|KGN46728.1| hypothetical protein Csa_6G127400 [Cucumis sativus]
          Length = 456

 Score =  229 bits (585), Expect = 3e-57
 Identities = 159/404 (39%), Positives = 223/404 (55%), Gaps = 16/404 (3%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M  G  KGTV  LASL   ++A+KAA RV +AI E+++E   +  FIT+N+NL KLV  L
Sbjct: 82   MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 141

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            P++L H +MVPFGKAAFFPGRLIHTNEFLVLLG+GYYA++TS+QTAEIL RRGK L+S++
Sbjct: 142  PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 201

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN------- 613
            +SLKAMM +L+              DGLVEI+E+Y+EE   E++S SG++K +       
Sbjct: 202  DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 261

Query: 614  ----IIPDDEECAQAMSRMDALEKLEEEAC-----SDDEDNDFECSSMFSGLKLNDRVQK 766
                I   D E A+ M+R D LEK EE A      SDDED + + +        N  +++
Sbjct: 262  DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQ-------NQSLER 314

Query: 767  FMDEYRFSAASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSAS 946
            F  + +    SL   S   T T P + +  +   L K+   K    + + S C + +S  
Sbjct: 315  FYGDKQ----SLSKGS---TSTWPRDENVSSKELLNKYQ--KQQEASTNPSNC-SGLSVQ 364

Query: 947  GMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQK 1126
               K +VT     L+ S           ++V   + + K   F + V ++         +
Sbjct: 365  TSPKEDVTSGNNSLTES-----------QRVINPNPAAKSVTFAE-VKEKNQTLPPSTNQ 412

Query: 1127 AFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            AFTGSI+E    + PK +            + PSKPVSRFKMQ+
Sbjct: 413  AFTGSIIERP-PIIPKTSKQETETTLQPSGSQPSKPVSRFKMQR 455


>ref|XP_004139947.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            [Cucumis sativus]
          Length = 375

 Score =  229 bits (585), Expect = 3e-57
 Identities = 159/404 (39%), Positives = 223/404 (55%), Gaps = 16/404 (3%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M  G  KGTV  LASL   ++A+KAA RV +AI E+++E   +  FIT+N+NL KLV  L
Sbjct: 1    MESGRVKGTVTSLASLFPAQDARKAASRVQDAISEKQRELEQLRGFITDNDNLIKLVQKL 60

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            P++L H +MVPFGKAAFFPGRLIHTNEFLVLLG+GYYA++TS+QTAEIL RRGK L+S++
Sbjct: 61   PEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTAEILKRRGKALDSQV 120

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN------- 613
            +SLKAMM +L+              DGLVEI+E+Y+EE   E++S SG++K +       
Sbjct: 121  DSLKAMMDNLKAEASFFDATASEAEDGLVEIKEEYVEENFCEQESTSGVNKQDVPSVSGV 180

Query: 614  ----IIPDDEECAQAMSRMDALEKLEEEAC-----SDDEDNDFECSSMFSGLKLNDRVQK 766
                I   D E A+ M+R D LEK EE A      SDDED + + +        N  +++
Sbjct: 181  DKAKIAEIDAEYARMMARFDELEKEEELAAANGNKSDDEDEEEKGTQ-------NQSLER 233

Query: 767  FMDEYRFSAASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSAS 946
            F  + +    SL   S   T T P + +  +   L K+   K    + + S C + +S  
Sbjct: 234  FYGDKQ----SLSKGS---TSTWPRDENVSSKELLNKYQ--KQQEASTNPSNC-SGLSVQ 283

Query: 947  GMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQK 1126
               K +VT     L+ S           ++V   + + K   F + V ++         +
Sbjct: 284  TSPKEDVTSGNNSLTES-----------QRVINPNPAAKSVTFAE-VKEKNQTLPPSTNQ 331

Query: 1127 AFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            AFTGSI+E    + PK +            + PSKPVSRFKMQ+
Sbjct: 332  AFTGSIIERP-PIIPKTSKQETETTLQPSGSQPSKPVSRFKMQR 374


>ref|XP_012088258.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X2 [Jatropha curcas]
          Length = 409

 Score =  228 bits (582), Expect = 8e-57
 Identities = 156/415 (37%), Positives = 218/415 (52%), Gaps = 33/415 (7%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV  L+S+  V+EAQKAAKRV + + E++KE   ++ FI +N NL  LV  LPD+L H
Sbjct: 6    KGTVTSLSSMFPVDEAQKAAKRVEDTVAEKQKELDDLKEFIADNTNLINLVSRLPDELHH 65

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             +MVPFGKAAFFPGRL+HTNEF+VLLG+GYY ++T++QT EIL RRGKVL+S++ESLKA 
Sbjct: 66   DVMVPFGKAAFFPGRLVHTNEFMVLLGEGYYVERTAKQTVEILKRRGKVLDSQVESLKAN 125

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPNIIPDDEECAQAMS 652
            + DL+              +GLVEIREDY+EE   + KS+S  +   ++ D++E A+ MS
Sbjct: 126  IKDLRAEASFFDFTAYEAAEGLVEIREDYVEESSGKGKSKSEKNDDKVVVDNDEFARIMS 185

Query: 653  RMDALEKLEEEACSDDEDNDF-------ECSSMFSGLKLNDRVQKFMDEYRFSAASLGPS 811
            R+D LEK EE A   D +ND        E  +     +LN+ V+   DE      +  P 
Sbjct: 186  RLDELEK-EELAVEGDNENDVDEYTRTAESDNESDEDQLNNTVES-DDECHEDEHTDMPK 243

Query: 812  SGN--------------------CTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGN 931
             GN                         P + +   N  +          +  ++ P   
Sbjct: 244  RGNGNYGYEPKEAKLNHFTSQNFFEMRKPQKQTKVGNVPVQALSNMYDRQLDINDKPDCT 303

Query: 932  DMSASGMVKSNVTE-KPLFLSTSKEGCADSGSKI-----EKVPTVHHSKKEKDFGDNVGD 1093
             ++   + K + ++ KP  LS +KE      S +     EKV TV  ++ E        +
Sbjct: 304  GLTVQSLSKDHKSDSKP--LSETKESIPSEKSLLFPEVKEKVKTVSSTRNE------TPE 355

Query: 1094 RPAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            R      D  KAFTGSIVE +  +P   +              PSKPVSRFKMQ+
Sbjct: 356  RTPKQGFDSSKAFTGSIVERTVDLP--NSQQKTVASSESSNPQPSKPVSRFKMQR 408


>ref|XP_009395177.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Musa acuminata subsp. malaccensis]
            gi|695016532|ref|XP_009395178.1| PREDICTED: RNA
            polymerase II subunit 5-mediating protein homolog isoform
            X1 [Musa acuminata subsp. malaccensis]
          Length = 394

 Score =  228 bits (582), Expect = 8e-57
 Identities = 152/408 (37%), Positives = 220/408 (53%), Gaps = 19/408 (4%)
 Frame = +2

Query: 101  DGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPD 280
            +   +GT+  L +L   +EAQKAA+RV EAI +R  E   ++ F+++N++L  LV TLP+
Sbjct: 2    EAAARGTITSLETLFPPDEAQKAARRVEEAIADRRNELLRVQGFVSDNSSLINLVRTLPE 61

Query: 281  QLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLES 460
            +LSH IMVPFG AAFFPGRL+HTNEFLVLLG+GYYA++T++QT EIL RRGK LE ++ES
Sbjct: 62   ELSHDIMVPFGSAAFFPGRLVHTNEFLVLLGEGYYAERTAKQTMEILQRRGKALEGQVES 121

Query: 461  LKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQ----PTEKKSESGLSKPNIIPDD 628
            LKA M+DL+              +GLVEIRE+Y+EE     P     +S      +  +D
Sbjct: 122  LKATMVDLEAEAKFFDSTAAEAAEGLVEIREEYVEESEKKAPGSDSLDSKRDDMQMPDED 181

Query: 629  EECAQAMSRMDALEKLE-EEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLG 805
            EE A+ M+R+D LEK E E+  + D+DN+       +G ++ D      DE   S++S  
Sbjct: 182  EEYARIMARLDELEKEELEDGSTSDDDNE----ENLAGDEVEDDETGDEDEDAESSSSFS 237

Query: 806  PSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSNVTEKPLF 985
             S     +    E   ++   + K  G    ++    S         G+ +  +T++P F
Sbjct: 238  TSD---LKHEILEIKHKSEHPVQKARGQGQEMLGSIVS-----KQIGGITEQPLTDQP-F 288

Query: 986  LSTSK-------EGCADSGSKIEKVPTVHHS-------KKEKDFGDNVGDRPAVNRADHQ 1123
               SK          ++SG  I K  +   S        K +D  ++   + +   +   
Sbjct: 289  SGDSKMQFPAVAHSFSNSGQSISKEVSRSSSSDAKFSFSKIEDSSNSTSRQISDRVSSGH 348

Query: 1124 KAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQKGGR 1267
            KAFTGSI+EH  G+P  P             ++ SKPVSRFKMQKG R
Sbjct: 349  KAFTGSIIEHDLGLP--PIQSAKSNLGQASVSSSSKPVSRFKMQKGNR 394


>ref|XP_012088257.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Jatropha curcas]
          Length = 413

 Score =  228 bits (580), Expect = 1e-56
 Identities = 161/417 (38%), Positives = 215/417 (51%), Gaps = 35/417 (8%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV  L+S+  V+EAQKAAKRV + + E++KE   ++ FI +N NL  LV  LPD+L H
Sbjct: 6    KGTVTSLSSMFPVDEAQKAAKRVEDTVAEKQKELDDLKEFIADNTNLINLVSRLPDELHH 65

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             +MVPFGKAAFFPGRL+HTNEF+VLLG+GYY ++T++QT EIL RRGKVL+S++ESLKA 
Sbjct: 66   DVMVPFGKAAFFPGRLVHTNEFMVLLGEGYYVERTAKQTVEILKRRGKVLDSQVESLKAN 125

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPNIIPDDEECAQAMS 652
            + DL+              +GLVEIREDY+EE   + KS+S  +   ++ D++E A+ MS
Sbjct: 126  IKDLRAEASFFDFTAYEAAEGLVEIREDYVEESSGKGKSKSEKNDDKVVVDNDEFARIMS 185

Query: 653  RMDALEKLEEEACSDDEDNDF-------ECSSMFSGLKLNDRVQKFMDEYRFSAASLGPS 811
            R+D LEK EE A   D +ND        E  +     +LN+ V+   DE      +  P 
Sbjct: 186  RLDELEK-EELAVEGDNENDVDEYTRTAESDNESDEDQLNNTVES-DDECHEDEHTDMPK 243

Query: 812  SGNCTQ-TSPSETSTRTNPDLYKFDGAK--------------------AHLVAEDESPCG 928
             GN      P E           F+  K                      L   D+  C 
Sbjct: 244  RGNGNYGYEPKEAKLNHFTSQNFFEMRKPQKQTKVGNVPVQALSNMYDRQLDINDKPDCT 303

Query: 929  --NDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKI-----EKVPTVHHSKKEKDFGDNV 1087
                 S S +V S+       LS +KE      S +     EKV TV  ++ E       
Sbjct: 304  GLTVQSLSKVVSSDHKSDSKPLSETKESIPSEKSLLFPEVKEKVKTVSSTRNE------T 357

Query: 1088 GDRPAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
             +R      D  KAFTGSIVE +  +P   +              PSKPVSRFKMQ+
Sbjct: 358  PERTPKQGFDSSKAFTGSIVERTVDLP--NSQQKTVASSESSNPQPSKPVSRFKMQR 412


>ref|XP_006447280.1| hypothetical protein CICLE_v10015278mg [Citrus clementina]
            gi|568831237|ref|XP_006469881.1| PREDICTED: RNA
            polymerase II subunit 5-mediating protein homolog isoform
            X1 [Citrus sinensis] gi|568831239|ref|XP_006469882.1|
            PREDICTED: RNA polymerase II subunit 5-mediating protein
            homolog isoform X2 [Citrus sinensis]
            gi|557549891|gb|ESR60520.1| hypothetical protein
            CICLE_v10015278mg [Citrus clementina]
          Length = 438

 Score =  228 bits (580), Expect = 1e-56
 Identities = 156/427 (36%), Positives = 222/427 (51%), Gaps = 36/427 (8%)
 Frame = +2

Query: 86   EATMADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLV 265
            ++ M +   KGTV  ++S+  V++ QKAAKRV +A+ E+++E   ++ FI++N NL  LV
Sbjct: 35   QSVMEEPTAKGTVTSISSMFPVDDVQKAAKRVQDALSEKQQELERVKEFISDNTNLINLV 94

Query: 266  HTLPDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLE 445
              LP++L H IMVPFGKAAFFPGRLIHTNEF+VLLG+GYYA++TS+QT EIL RRGKVL+
Sbjct: 95   QKLPEELHHDIMVPFGKAAFFPGRLIHTNEFMVLLGEGYYAERTSKQTVEILKRRGKVLD 154

Query: 446  SKLESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSK------ 607
            S+++SLKAMM DLQ              +GLVEIRE+Y EE  +E+ SESGL K      
Sbjct: 155  SQVDSLKAMMKDLQAEASFFDTTASEAAEGLVEIREEYGEENLSERTSESGLLKQDSSRL 214

Query: 608  ---PNIIPDDEECAQAMSRMDALEKLE--------------------EEACSDDEDNDFE 718
                N+  +DE  A+ MSR+D LEK E                    + A   DEDN+ E
Sbjct: 215  SEADNLKDEDELYARIMSRLDELEKEELAWEIENGSAESKQNNVAKSDNAKYGDEDNELE 274

Query: 719  CSSMFSGLKLNDRVQKFMDEYRFSAASLGPSSGN-------CTQTSPSETSTRTNPDLYK 877
                    +L    +   DE + + A+   +  N        +    ++ S   N    +
Sbjct: 275  ------EAELAAETENRSDENKQNNAAGSDNENNEDEQANTVSDQFSNQISLDHNLRHSE 328

Query: 878  FDGAKAHLVAEDESPCGNDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHS 1057
              G       ED  P    ++ +  V++N  EK L L   ++  A +   I+++ +   S
Sbjct: 329  CTGLTVQAALEDAKPRTKSLATNVNVEANSAEKALVL-PKEDNVATAPLSIQEI-SAQAS 386

Query: 1058 KKEKDFGDNVGDRPAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPV 1237
            K E                D  KAFT SI+EH++ +                  + SKPV
Sbjct: 387  KPE---------------FDRYKAFTESIIEHNYNLQTDQQEQIRNTSKPSGSQS-SKPV 430

Query: 1238 SRFKMQK 1258
            SRFKMQ+
Sbjct: 431  SRFKMQR 437


>emb|CBI21871.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  226 bits (577), Expect = 3e-56
 Identities = 162/413 (39%), Positives = 211/413 (51%), Gaps = 31/413 (7%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV PLASL   EEAQKA+KRV +A+ +R+ E   ++ FI +N  L  LV  LPD+L H
Sbjct: 6    KGTVTPLASLFPPEEAQKASKRVQDALADRQSELDRLQGFIADNTALVNLVQRLPDELHH 65

Query: 293  HIM------------VPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGK 436
             IM            VPFGKAAFFPGRL+HTNEFLVLLG+GYYA++TS+QT EIL RRGK
Sbjct: 66   DIMARKNPPQPNQTVVPFGKAAFFPGRLVHTNEFLVLLGEGYYAERTSKQTVEILDRRGK 125

Query: 437  VLESKLESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKPN- 613
             LES+++SLKAMM DL+              +GLVEIREDY+EE  +E+  E G  KP+ 
Sbjct: 126  ALESQVDSLKAMMKDLKAEVSFFDATAAEAVEGLVEIREDYVEESSSERVIERGPPKPDS 185

Query: 614  ----------IIPDDEECAQAMSRMDALEKLEEEACS-----DDEDNDFECSSMFSGLKL 748
                      +  +DEE A+ M R D LEK E  A S     +DE N+ +     S L  
Sbjct: 186  PRFSGEDSMKVAAEDEEYARMMLRFDELEKEELAAGSGDEHDEDEHNEADVDHSLSQLS- 244

Query: 749  NDRVQKFMDEYRFSAASLGPSSGNCTQTSPSETSTRTNPDL---YKFDGAKAHLVAEDES 919
             D V   ++E R     L  S      T    +      D     K +G K   V +D  
Sbjct: 245  GDHVLGSLEE-RQVRKPLHHSKDEYATTEELLSKQHFEEDFANQLKLEGLKEQSVPKD-- 301

Query: 920  PCGNDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRP 1099
                          +V+    F + + +  +     I+ +PT   SK E     +   +P
Sbjct: 302  ------------SDDVSHGKSFANRATQSSSHGKDNIQALPT---SKAETSVQSS---KP 343

Query: 1100 AVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            A    D  KAFTGSIVEH+  +   P             + P+KPVSRFKMQ+
Sbjct: 344  A---TDSLKAFTGSIVEHTRNIQMNP-REQAASSSQSSGSQPTKPVSRFKMQR 392


>ref|XP_006469883.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X3 [Citrus sinensis]
            gi|568831243|ref|XP_006469884.1| PREDICTED: RNA
            polymerase II subunit 5-mediating protein homolog isoform
            X4 [Citrus sinensis]
          Length = 401

 Score =  226 bits (577), Expect = 3e-56
 Identities = 156/424 (36%), Positives = 220/424 (51%), Gaps = 36/424 (8%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M +   KGTV  ++S+  V++ QKAAKRV +A+ E+++E   ++ FI++N NL  LV  L
Sbjct: 1    MEEPTAKGTVTSISSMFPVDDVQKAAKRVQDALSEKQQELERVKEFISDNTNLINLVQKL 60

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            P++L H IMVPFGKAAFFPGRLIHTNEF+VLLG+GYYA++TS+QT EIL RRGKVL+S++
Sbjct: 61   PEELHHDIMVPFGKAAFFPGRLIHTNEFMVLLGEGYYAERTSKQTVEILKRRGKVLDSQV 120

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSK--------- 607
            +SLKAMM DLQ              +GLVEIRE+Y EE  +E+ SESGL K         
Sbjct: 121  DSLKAMMKDLQAEASFFDTTASEAAEGLVEIREEYGEENLSERTSESGLLKQDSSRLSEA 180

Query: 608  PNIIPDDEECAQAMSRMDALEKLE--------------------EEACSDDEDNDFECSS 727
             N+  +DE  A+ MSR+D LEK E                    + A   DEDN+ E   
Sbjct: 181  DNLKDEDELYARIMSRLDELEKEELAWEIENGSAESKQNNVAKSDNAKYGDEDNELE--- 237

Query: 728  MFSGLKLNDRVQKFMDEYRFSAASLGPSSGN-------CTQTSPSETSTRTNPDLYKFDG 886
                 +L    +   DE + + A+   +  N        +    ++ S   N    +  G
Sbjct: 238  ---EAELAAETENRSDENKQNNAAGSDNENNEDEQANTVSDQFSNQISLDHNLRHSECTG 294

Query: 887  AKAHLVAEDESPCGNDMSASGMVKSNVTEKPLFLSTSKEGCADSGSKIEKVPTVHHSKKE 1066
                   ED  P    ++ +  V++N  EK L L   ++  A +   I+++ +   SK E
Sbjct: 295  LTVQAALEDAKPRTKSLATNVNVEANSAEKALVL-PKEDNVATAPLSIQEI-SAQASKPE 352

Query: 1067 KDFGDNVGDRPAVNRADHQKAFTGSIVEHSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRF 1246
                            D  KAFT SI+EH++ +                  + SKPVSRF
Sbjct: 353  ---------------FDRYKAFTESIIEHNYNLQTDQQEQIRNTSKPSGSQS-SKPVSRF 396

Query: 1247 KMQK 1258
            KMQ+
Sbjct: 397  KMQR 400


>ref|XP_011465595.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X2 [Fragaria vesca subsp. vesca]
          Length = 368

 Score =  226 bits (576), Expect = 4e-56
 Identities = 159/396 (40%), Positives = 222/396 (56%), Gaps = 14/396 (3%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV PL+S+ SVE+ QKAA+RVH+ I +++ E   +  F+ +N +L  LV  LPD L H
Sbjct: 4    KGTVTPLSSVFSVEDTQKAAQRVHDTIAQKDLELERLLGFVADNTDLINLVGRLPDHLHH 63

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRL+HTNEF+VLLG+GYYA++TS+QT +IL+RRGKVLES+L+SLKAM
Sbjct: 64   DIMVPFGKAAFFPGRLVHTNEFMVLLGEGYYAERTSKQTVDILNRRGKVLESQLDSLKAM 123

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKS--------ESGLSKPNIIPDD 628
            + DL+              +GLVEI EDY EE  ++++S         SG      + +D
Sbjct: 124  VQDLKAEASFFNATASEAAEGLVEIMEDYEEESSSDRESALKQDSPKNSGTVITEHVDED 183

Query: 629  EECAQAMSRMDALEKLEEEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLG- 805
            EE A+ M+RMD LEK E EA S    +D            N+ VQ  + +     +  G 
Sbjct: 184  EEFARMMARMDELEKEEREAESQMSQSD-----------ENEEVQLGLHQLSDQKSLHGN 232

Query: 806  -PSSGNCTQTSPSET--STRTNPDLYKFDGAKAHL--VAEDESPCGNDMSASGMVKSNVT 970
              +SG+ ++ SP +T     +N D +  + + + L  ++ D+   GN ++ +  VKS V 
Sbjct: 233  LKTSGSQSRKSPQQTKDGIASNKDSFTDEPSCSGLETISADKLSHGNILARN--VKS-VA 289

Query: 971  EKPLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSIVE 1150
            EK  F+S   E      S   +VP    S K K               + +KAFTGSIVE
Sbjct: 290  EKD-FVSPVVENFQTVPSSRSQVPL--ESSKPK--------------FEREKAFTGSIVE 332

Query: 1151 HSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            H+  +  K +            +  SKPVSRFKMQ+
Sbjct: 333  HADNLQIK-SRERTTATSQSSASQVSKPVSRFKMQR 367


>ref|XP_011626665.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X2 [Amborella trichopoda]
          Length = 356

 Score =  225 bits (573), Expect = 8e-56
 Identities = 164/398 (41%), Positives = 211/398 (53%), Gaps = 13/398 (3%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV  L+SL  VEEA KA  RV EAI +R KE   +  FI+EN++L  LV  LPD++SH
Sbjct: 6    KGTVTSLSSLFPVEEAMKAELRVKEAIAQRTKELDQLNLFISENSSLMNLVQRLPDEISH 65

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGK AFFPGRLIHTNEFLVLLGDGYYA+++S+QT+EILHRR K LESK+E LKAM
Sbjct: 66   EIMVPFGKVAFFPGRLIHTNEFLVLLGDGYYAERSSKQTSEILHRRAKTLESKVEGLKAM 125

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQ---PTEKKSESGL-----SKPNIIPDD 628
            +LDL+              +GL EIREDYIE+     T+ ++ES       +  N   +D
Sbjct: 126  LLDLEAEASFFNATAAEAAEGLFEIREDYIEQSTNIATQNQTESNADPSSRTSGNRSSED 185

Query: 629  EECAQAMSRMDALEKLEEEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLGP 808
            EE A+ M R+D LE   EEA +D+  +  E   +     L+D                  
Sbjct: 186  EEYARMMLRLDELEL--EEARADENASGIEEEEL---PDLDD------------------ 222

Query: 809  SSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSNVTEKPLFL 988
                       ETS R + D  + +  K     +DES  GN + + GM  SNV  +  F 
Sbjct: 223  -----------ETSARCSGD--EGEDIKNQPHKQDESIEGNVIKSLGM-PSNVKMEEYFP 268

Query: 989  STSKEGCADSGSKIEKVPTVHHSKKEKD-FGDNVGDRPAVNRADHQKAFTGSIVEHSHGM 1165
               ++    + +K E       S    D   DN+G   + +RA ++KAFTG IVE     
Sbjct: 269  RLEEKISMRTTTKGEVFKDNFSSHSSGDRAADNLGSHSSGDRAANRKAFTGLIVERDFSS 328

Query: 1166 PPKPTXXXXXXXXXXXXNAPS----KPVSRFKMQKGGR 1267
                T             APS    KPVSRFKMQ+G R
Sbjct: 329  NEGQT----------FSQAPSTDSPKPVSRFKMQRGNR 356


>gb|KHN28114.1| RNA polymerase II subunit 5-mediating protein like [Glycine soja]
          Length = 374

 Score =  224 bits (572), Expect = 1e-55
 Identities = 156/396 (39%), Positives = 209/396 (52%), Gaps = 8/396 (2%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M +   KG+V  LASL  VEEAQ+AAKRV + I +++ E   +  F T+NN+L  LVH L
Sbjct: 1    MDESTKKGSVTSLASLFPVEEAQRAAKRVEDTIADKQSELDRLRGFATDNNSLINLVHKL 60

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            P+QLSH IMVPFGKAAFFPGRLIHTNEFLVLLG+GYYA++TS+QT EIL RRGK L+S++
Sbjct: 61   PEQLSHDIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILQRRGKSLDSQV 120

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESGLSKP------NI 616
            +SL+A + DL+              +GLVEIREDY+E+   E + +SG  +       N 
Sbjct: 121  DSLEANIKDLEAEASFFNATASQVAEGLVEIREDYLEKDSNEGEFKSGHPQQEAPNLGNA 180

Query: 617  IPDDEECAQAMSRMDALEKLEEEACS-DDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSA 793
              DD E A+ ++ MD LEK E  A S +  D + E +  F  +   + +   +       
Sbjct: 181  TADDGEYARMLAIMDELEKEELAAESGNHSDQNDESTGDFHDISYREHIDNKLQ------ 234

Query: 794  ASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSNVTE 973
                    N      SE   + N  +   D  K     ED +   N   AS  V+S V E
Sbjct: 235  --------NSKDVHQSELLDQINNKIITADLPKKQNRKEDITDQLN--FASLAVESRVKE 284

Query: 974  KPLFLS-TSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSIVE 1150
            +  F+          + SK   V     SK E      V  + +    D +KAFTGSI+E
Sbjct: 285  RENFVEYIDPSEKIPARSKERSVQATTASKTE------VRHQTSQPSFDSRKAFTGSIIE 338

Query: 1151 HSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            H+  + P  T            +  SKPVSRFKMQ+
Sbjct: 339  HAENIKP-TTRQQSSASSQDSGSQSSKPVSRFKMQR 373


>ref|XP_004300695.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Fragaria vesca subsp. vesca]
          Length = 369

 Score =  224 bits (572), Expect = 1e-55
 Identities = 159/394 (40%), Positives = 221/394 (56%), Gaps = 12/394 (3%)
 Frame = +2

Query: 113  KGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTLPDQLSH 292
            KGTV PL+S+ SVE+ QKAA+RVH+ I +++ E   +  F+ +N +L  LV  LPD L H
Sbjct: 4    KGTVTPLSSVFSVEDTQKAAQRVHDTIAQKDLELERLLGFVADNTDLINLVGRLPDHLHH 63

Query: 293  HIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKLESLKAM 472
             IMVPFGKAAFFPGRL+HTNEF+VLLG+GYYA++TS+QT +IL+RRGKVLES+L+SLKAM
Sbjct: 64   DIMVPFGKAAFFPGRLVHTNEFMVLLGEGYYAERTSKQTVDILNRRGKVLESQLDSLKAM 123

Query: 473  MLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKS--------ESGLSKPNIIPDD 628
            + DL+              +GLVEI EDY EE  ++++S         SG      + +D
Sbjct: 124  VQDLKAEASFFNATASEAAEGLVEIMEDYEEESSSDRESALKQDSPKNSGTVITEHVDED 183

Query: 629  EECAQAMSRMDALEKLEEEACSDDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSAASLGP 808
            EE A+ M+RMD LEK E EA S    +D          +L+D  QK +        +L  
Sbjct: 184  EEFARMMARMDELEKEEREAESQMSQSDENEEVQLGLHQLSD--QKSLH------GNLKT 235

Query: 809  SSGNCTQTSPSET--STRTNPDLYKFDGAKAHL--VAEDESPCGNDMSASGMVKSNVTEK 976
            S  + ++ SP +T     +N D +  + + + L  ++ D+   GN ++ +  VKS V EK
Sbjct: 236  SGQSQSRKSPQQTKDGIASNKDSFTDEPSCSGLETISADKLSHGNILARN--VKS-VAEK 292

Query: 977  PLFLSTSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSIVEHS 1156
              F+S   E      S   +VP    S K K               + +KAFTGSIVEH+
Sbjct: 293  D-FVSPVVENFQTVPSSRSQVPL--ESSKPK--------------FEREKAFTGSIVEHA 335

Query: 1157 HGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
              +  K +            +  SKPVSRFKMQ+
Sbjct: 336  DNLQIK-SRERTTATSQSSASQVSKPVSRFKMQR 368


>ref|XP_003540925.1| PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
            isoform X1 [Glycine max] gi|571493087|ref|XP_006592441.1|
            PREDICTED: RNA polymerase II subunit 5-mediating protein
            homolog isoform X2 [Glycine max]
          Length = 374

 Score =  224 bits (572), Expect = 1e-55
 Identities = 157/396 (39%), Positives = 210/396 (53%), Gaps = 8/396 (2%)
 Frame = +2

Query: 95   MADGVPKGTVKPLASLISVEEAQKAAKRVHEAIEEREKEASYIERFITENNNLFKLVHTL 274
            M +   KG+V  LASL  VEEAQ+AAKRV + I +++ E   +  F T+NN+L  LVH L
Sbjct: 1    MDESTKKGSVTSLASLFPVEEAQRAAKRVEDTIADKQSELDRLRGFATDNNSLINLVHKL 60

Query: 275  PDQLSHHIMVPFGKAAFFPGRLIHTNEFLVLLGDGYYADQTSRQTAEILHRRGKVLESKL 454
            P+QLSH IMVPFGKAAFFPGRLIHTNEFLVLLG+GYYA++TS+QT EIL RRGK L+S++
Sbjct: 61   PEQLSHDIMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILQRRGKSLDSQV 120

Query: 455  ESLKAMMLDLQXXXXXXXXXXXXXXDGLVEIREDYIEEQPTEKKSESG---LSKPNI--- 616
            +SL+A + DL+              +GLVEIREDY+E+   E + +SG      PN+   
Sbjct: 121  DSLEANIKDLEAEASFFNATASQVAEGLVEIREDYLEKDSNEGEFKSGHLQQEAPNLGNA 180

Query: 617  IPDDEECAQAMSRMDALEKLEEEACS-DDEDNDFECSSMFSGLKLNDRVQKFMDEYRFSA 793
              DD E A+ ++ MD LEK E  A S +  D + E +  F  +   + +   +       
Sbjct: 181  TADDGEYARMLAIMDELEKEELAAESGNHSDQNDESTGDFHDISYQEHIDNKLQ------ 234

Query: 794  ASLGPSSGNCTQTSPSETSTRTNPDLYKFDGAKAHLVAEDESPCGNDMSASGMVKSNVTE 973
                    N      SE   + N  +   D  K     ED +   N   AS  V+S V E
Sbjct: 235  --------NSKDVHQSELLDQINNKIITADLPKKQNRKEDITDQLN--FASLAVESRVKE 284

Query: 974  KPLFLS-TSKEGCADSGSKIEKVPTVHHSKKEKDFGDNVGDRPAVNRADHQKAFTGSIVE 1150
            +  F+          + SK   V     SK E      V  + +    D +KAFTGSI+E
Sbjct: 285  RENFVEYIDPSEKIPARSKERSVQATTASKTE------VRHQTSQPSFDSRKAFTGSIIE 338

Query: 1151 HSHGMPPKPTXXXXXXXXXXXXNAPSKPVSRFKMQK 1258
            H+  + P  T            +  SKPVSRFKMQ+
Sbjct: 339  HAENIKP-TTRQQSSASSQDSGSQSSKPVSRFKMQR 373