BLASTX nr result

ID: Cinnamomum23_contig00009055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00009055
         (719 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis...    73   2e-10
gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium r...    71   5e-10
gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium r...    49   6e-09
ref|XP_010110759.1| 50S ribosomal protein L2 [Morus notabilis] g...    67   1e-08
ref|XP_010101689.1| hypothetical protein L484_006809 [Morus nota...    67   1e-08
emb|CDX91813.1| BnaC03g31150D [Brassica napus]                         65   3e-08
emb|CDY21179.1| BnaA01g34100D [Brassica napus]                         65   3e-08
emb|CDY28606.1| BnaA06g19320D [Brassica napus] gi|674938178|emb|...    65   3e-08
ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncat...    64   7e-08
gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]    62   3e-07
ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncat...    62   3e-07
ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus ...    62   4e-07

>ref|YP_008592707.1| ribosomal protein L2 (chloroplast) [Berberis bealei]
           gi|536462748|gb|AGU37113.1| ribosomal protein L2
           (chloroplast) [Berberis bealei]
          Length = 310

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -2

Query: 109 YTSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           YTSGKPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 138 YTSGKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 173


>gb|KJB10645.1| hypothetical protein B456_001G213100 [Gossypium raimondii]
          Length = 236

 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 41/75 (54%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = -2

Query: 223 DHNMSDLADLYSYISTHVVLHHTIHIKSICLDIIIEYIYTSGKPYALEEACTVWEGV-FI 47
           DHNMS   DL SYIS HV+   T                 S   YALEEACT+WEGV  I
Sbjct: 33  DHNMSGSTDLDSYISNHVISSST-----------------SRNSYALEEACTIWEGVLII 75

Query: 46  DQKEKSTSTHMPLGT 2
           DQKE+STST+MPLGT
Sbjct: 76  DQKEESTSTNMPLGT 90


>gb|KJB15228.1| hypothetical protein B456_002G165900 [Gossypium raimondii]
          Length = 171

 Score = 49.3 bits (116), Expect(2) = 6e-09
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -2

Query: 502 MEKTKLFEARTEAEATLVSKRRGWVIHISFDGQR 401
           M  TKLF+A  E EA+LVSKR G VIHISFDGQR
Sbjct: 1   MGMTKLFQAPIEPEASLVSKREGRVIHISFDGQR 34



 Score = 38.5 bits (88), Expect(2) = 6e-09
 Identities = 15/18 (83%), Positives = 17/18 (94%)
 Frame = -3

Query: 369 KFPRGKIEMSPTLPVICG 316
           +FPRGKIEMSP LP+ICG
Sbjct: 34  RFPRGKIEMSPILPIICG 51


>ref|XP_010110759.1| 50S ribosomal protein L2 [Morus notabilis]
           gi|587941453|gb|EXC28024.1| 50S ribosomal protein L2
           [Morus notabilis]
          Length = 200

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           TS KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 29  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63


>ref|XP_010101689.1| hypothetical protein L484_006809 [Morus notabilis]
           gi|587900967|gb|EXB89255.1| hypothetical protein
           L484_006809 [Morus notabilis]
          Length = 97

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           TS KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 29  TSRKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 63


>emb|CDX91813.1| BnaC03g31150D [Brassica napus]
          Length = 187

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           T  KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 16  TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50


>emb|CDY21179.1| BnaA01g34100D [Brassica napus]
          Length = 266

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           T  KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 16  TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50


>emb|CDY28606.1| BnaA06g19320D [Brassica napus] gi|674938178|emb|CDX95206.1|
           BnaC09g16640D [Brassica napus]
          Length = 187

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 30/35 (85%), Positives = 31/35 (88%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           T  KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 16  TEEKPYALEEACTVWEGVLIDQKEESTSTDMPLGT 50


>ref|XP_003605596.1| 50S ribosomal protein L2-B [Medicago truncatula]
          Length = 399

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = -2

Query: 97  KPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           KPYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 171 KPYALEEACTVWEGVLIDQKEESTSTDMPLGT 202


>gb|AFS35548.1| ribosomal protein L2, partial [Fragaria pentaphylla]
          Length = 122

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 94 PYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
          PYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 1  PYALEEACTVWEGVLIDQKEESTSTDMPLGT 31


>ref|XP_003606061.1| 50S ribosomal protein L2-B [Medicago truncatula]
           gi|355507116|gb|AES88258.1| 50S ribosomal protein L2
           [Medicago truncatula]
          Length = 382

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -2

Query: 94  PYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           PYALEEACTVWEGV IDQKE+STST MPLGT
Sbjct: 235 PYALEEACTVWEGVLIDQKEESTSTDMPLGT 265


>ref|XP_002515004.1| 50S ribosomal protein L2, putative [Ricinus communis]
           gi|223546055|gb|EEF47558.1| 50S ribosomal protein L2,
           putative [Ricinus communis]
          Length = 111

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 106 TSGKPYALEEACTVWEGVFIDQKEKSTSTHMPLGT 2
           T  KPYALEEACTVWE + IDQKE+STST MPLGT
Sbjct: 9   TPRKPYALEEACTVWEEILIDQKEESTSTDMPLGT 43


Top