BLASTX nr result

ID: Cinnamomum23_contig00009036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00009036
         (275 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...   112   2e-30
gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]        74   4e-11
gb|KJB09779.1| hypothetical protein B456_001G164700, partial [Go...    56   8e-06

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score =  112 bits (280), Expect(2) = 2e-30
 Identities = 54/57 (94%), Positives = 54/57 (94%)
 Frame = +2

Query: 2   PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTSPLQSSIKLAFPRRYEMG 172
           PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSST PLQSSIKLAF RR EMG
Sbjct: 18  PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMG 74



 Score = 47.0 bits (110), Expect(2) = 2e-30
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = +3

Query: 171 GALPSPIVCIGLASSRTKEAFWRARACRNADY 266
           G  PSPIVCIGLASSR+K  + RARACR AD+
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADH 104


>gb|EPS74694.1| hypothetical protein M569_00069 [Genlisea aurea]
          Length = 190

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 35/41 (85%), Positives = 36/41 (87%)
 Frame = -2

Query: 244 RARQNASLVRDEAKPIHTIGEGSAPHFIAPGERKFDGGLER 122
           R RQNASLVRDEAKP +TIGEG  PHFIAPGERKFD GLER
Sbjct: 80  RRRQNASLVRDEAKPKYTIGEGKTPHFIAPGERKFDRGLER 120


>gb|KJB09779.1| hypothetical protein B456_001G164700, partial [Gossypium raimondii]
          Length = 231

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = +1

Query: 172 GRFLRLSYVSAWLRPEPRRHSGGRVR 249
           G FLRLSYVSAWLRPEPRRHSGGRVR
Sbjct: 156 GSFLRLSYVSAWLRPEPRRHSGGRVR 181


Top