BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00008345
         (3781 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256332.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1451   0.0  
ref|XP_010256331.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1451   0.0  
ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1393   0.0  
ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1393   0.0  
ref|XP_008781510.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1377   0.0  
ref|XP_010930827.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1373   0.0  
ref|XP_007041296.1| ATP-dependent RNA helicase, putative isoform...  1359   0.0  
ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform...  1359   0.0  
ref|XP_011028324.1| PREDICTED: ATP-dependent RNA helicase Dhx29 ...  1349   0.0  
ref|XP_011028323.1| PREDICTED: ATP-dependent RNA helicase Dhx29 ...  1349   0.0  
ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 ...  1349   0.0  
ref|XP_009353736.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1343   0.0  
ref|XP_012066649.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1339   0.0  
ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-...  1333   0.0  
ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1333   0.0  
ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-...  1326   0.0  
ref|XP_012467825.1| PREDICTED: ATP-dependent RNA helicase DHX29 ...  1326   0.0  
ref|XP_012467824.1| PREDICTED: ATP-dependent RNA helicase DHX36 ...  1326   0.0  
gb|KJB16163.1| hypothetical protein B456_002G216000 [Gossypium r...  1326   0.0  
gb|KJB16162.1| hypothetical protein B456_002G216000 [Gossypium r...  1326   0.0  

>ref|XP_010256332.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Nelumbo
            nucifera]
          Length = 1436

 Score = 1451 bits (3757), Expect = 0.0
 Identities = 772/1198 (64%), Positives = 907/1198 (75%), Gaps = 3/1198 (0%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            KLQISAENE       LNSG P  + +  P  + IS+AQKAKKLRSIYEKLSCEGFT+DQ
Sbjct: 30   KLQISAENEQRLRRLLLNSGRPSSSPSVTPANDTISKAQKAKKLRSIYEKLSCEGFTADQ 89

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE+ALSALNEGATFEAA              LKFSSGTS  + EG     GS+SIIS AR
Sbjct: 90   IEQALSALNEGATFEAALDWLCLNLPGNELPLKFSSGTSMYTSEG-----GSVSIISAAR 144

Query: 3252 ADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEEWXXX 3073
             DW PSQ    + +D++  VS+R KG  +DD  D  + SQADWIR+Y++QQEE+E+    
Sbjct: 145  EDWIPSQNLSTKNEDKMPEVSVRIKGKWEDDTFDSRQSSQADWIRKYVEQQEEEEDEWET 204

Query: 3072 XXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLKQE 2893
                              SRAVSIAKEYH ARL AV AKEKG+KK QE AG +IR+LKQE
Sbjct: 205  VADNVGNRSPNKEASDPSSRAVSIAKEYHIARLQAVTAKEKGDKKIQEEAGHKIRELKQE 264

Query: 2892 MASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAILDGGPM 2713
            M +LGLS+DIL    GD+  S+ +          L +P + +  D   + ES + +    
Sbjct: 265  MHALGLSEDILAEY-GDEHASDSI----------LSSPMACKGTDTVALSESVLHENEQT 313

Query: 2712 VEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTTLPPEV 2533
            V+GN+      K +                  E EEPGDV+  NLF ED S   TLPPEV
Sbjct: 314  VDGNLCVPVQKKAN-----------------MEGEEPGDVELDNLFSEDSS--GTLPPEV 354

Query: 2532 LKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKVLGNEC 2353
            LK+QKKE M    + Q   K   IW+KG+P KIPKAVLHQ+CQR GWEAPK++KVL    
Sbjct: 355  LKLQKKENMAGLSSAQVSEKFAGIWKKGEPQKIPKAVLHQICQRLGWEAPKFNKVLSKGN 414

Query: 2352 GFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLFPDLPV 2173
             FSY+V+VLR A+GRGKSRKAGGL+TL LPDQ E F             ALYRLFPD PV
Sbjct: 415  RFSYSVNVLRRASGRGKSRKAGGLLTLHLPDQEEAFESAEDAQNRVAAFALYRLFPDFPV 474

Query: 2172 HQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADV---SFHE 2002
            H+L+ EPYSS + K  EGE+L  +E TEDIRRADFVDSLL++ NS   TS D    +  E
Sbjct: 475  HRLITEPYSSFIKKLLEGESLAKIEDTEDIRRADFVDSLLNSGNSESNTSVDFMNDALDE 534

Query: 2001 KLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARASLPIA 1822
             LV    QE+ Y+  SA K ER N  K+VES +L+Q+ E K K+Q+Y++ML  RA+LPIA
Sbjct: 535  NLVIPDIQESLYSAASA-KPERKNNRKEVESAYLRQELENKGKVQKYREMLGFRAALPIA 593

Query: 1821 QLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPRRIAAI 1642
            +LKG++L LL+ENDV+VVCGETGCGKTTQVPQFILDDMI +  GGYC+I+CTQPRRIAAI
Sbjct: 594  ELKGNILQLLEENDVLVVCGETGCGKTTQVPQFILDDMIEAGLGGYCNIICTQPRRIAAI 653

Query: 1641 SVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRDLAGIT 1462
            SVAERVA+ERCE          G+QVRLD++RNE+TKLLFCTTGILLRKLAG+++L G+T
Sbjct: 654  SVAERVADERCEPSPGSNGSLVGFQVRLDTARNERTKLLFCTTGILLRKLAGDKNLTGVT 713

Query: 1461 HVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFGNCPVI 1282
            HVIVDEVHERSLL DFLLIVL+NLIE+QS+H+   LKV+LMSATVD+ LFSRYFGNCPV+
Sbjct: 714  HVIVDEVHERSLLSDFLLIVLKNLIEKQSTHQGPKLKVILMSATVDSSLFSRYFGNCPVV 773

Query: 1281 TAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKKNLVLS 1102
            TA+GR+HPVST FLED+YE+L Y+LASDSP SL   TS+K K RS  V NHRGKKNLVLS
Sbjct: 774  TAQGRTHPVSTLFLEDIYENLNYALASDSPASLKCFTSTKGKFRSSTVGNHRGKKNLVLS 833

Query: 1101 SWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDEVYPVG 922
            SWGD+S+LS++YVNP Y+PSSY++YS+RT+ NLK LNEDVIDYDLLEDL+ +IDE YP G
Sbjct: 834  SWGDDSLLSENYVNPYYVPSSYQSYSERTQKNLKCLNEDVIDYDLLEDLVCHIDETYPAG 893

Query: 921  AILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPENIRKVI 742
            +ILVFLPGVAEIY LLDKL ASY+FG L S+WLLPLHSSL+  DQRKVF  PPENIRKVI
Sbjct: 894  SILVFLPGVAEIYTLLDKLVASYQFGGLCSEWLLPLHSSLSSTDQRKVFRQPPENIRKVI 953

Query: 741  VATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRAGRVKP 562
            VATDIAETSITIDDVVYV+DCGKHKE+RYNPQKK+SSMVEDWISQANA+QR GRAGRVKP
Sbjct: 954  VATDIAETSITIDDVVYVVDCGKHKESRYNPQKKLSSMVEDWISQANAKQRRGRAGRVKP 1013

Query: 561  GICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPPRKEAV 382
            GICFCLYT +R E LMRP+QVPEMLRMPL+ELCLQIKSL LG I  FLLKAI+PPR+EA+
Sbjct: 1014 GICFCLYTCHRIENLMRPFQVPEMLRMPLIELCLQIKSLYLGFIKPFLLKAIDPPREEAI 1073

Query: 381  TSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIAAFLSY 202
            TSAI+ LYEVGA+EG EELTPLG+HLAKLPVDVLIGKMMLYG IFGCLSPILSI+AFLSY
Sbjct: 1074 TSAITMLYEVGALEGNEELTPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSISAFLSY 1133

Query: 201  KSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKILHER 28
            KSPFVYPKDEKQN++RAK SLL D+LD  + +D G RQSDHLLM+VAY +W KIL E+
Sbjct: 1134 KSPFVYPKDEKQNIERAKISLLTDRLDGTSGSDEGERQSDHLLMVVAYKRWVKILLEK 1191


>ref|XP_010256331.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Nelumbo
            nucifera]
          Length = 1454

 Score = 1451 bits (3757), Expect = 0.0
 Identities = 772/1198 (64%), Positives = 907/1198 (75%), Gaps = 3/1198 (0%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            KLQISAENE       LNSG P  + +  P  + IS+AQKAKKLRSIYEKLSCEGFT+DQ
Sbjct: 30   KLQISAENEQRLRRLLLNSGRPSSSPSVTPANDTISKAQKAKKLRSIYEKLSCEGFTADQ 89

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE+ALSALNEGATFEAA              LKFSSGTS  + EG     GS+SIIS AR
Sbjct: 90   IEQALSALNEGATFEAALDWLCLNLPGNELPLKFSSGTSMYTSEG-----GSVSIISAAR 144

Query: 3252 ADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEEWXXX 3073
             DW PSQ    + +D++  VS+R KG  +DD  D  + SQADWIR+Y++QQEE+E+    
Sbjct: 145  EDWIPSQNLSTKNEDKMPEVSVRIKGKWEDDTFDSRQSSQADWIRKYVEQQEEEEDEWET 204

Query: 3072 XXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLKQE 2893
                              SRAVSIAKEYH ARL AV AKEKG+KK QE AG +IR+LKQE
Sbjct: 205  VADNVGNRSPNKEASDPSSRAVSIAKEYHIARLQAVTAKEKGDKKIQEEAGHKIRELKQE 264

Query: 2892 MASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAILDGGPM 2713
            M +LGLS+DIL    GD+  S+ +          L +P + +  D   + ES + +    
Sbjct: 265  MHALGLSEDILAEY-GDEHASDSI----------LSSPMACKGTDTVALSESVLHENEQT 313

Query: 2712 VEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTTLPPEV 2533
            V+GN+      K +                  E EEPGDV+  NLF ED S   TLPPEV
Sbjct: 314  VDGNLCVPVQKKAN-----------------MEGEEPGDVELDNLFSEDSS--GTLPPEV 354

Query: 2532 LKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKVLGNEC 2353
            LK+QKKE M    + Q   K   IW+KG+P KIPKAVLHQ+CQR GWEAPK++KVL    
Sbjct: 355  LKLQKKENMAGLSSAQVSEKFAGIWKKGEPQKIPKAVLHQICQRLGWEAPKFNKVLSKGN 414

Query: 2352 GFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLFPDLPV 2173
             FSY+V+VLR A+GRGKSRKAGGL+TL LPDQ E F             ALYRLFPD PV
Sbjct: 415  RFSYSVNVLRRASGRGKSRKAGGLLTLHLPDQEEAFESAEDAQNRVAAFALYRLFPDFPV 474

Query: 2172 HQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADV---SFHE 2002
            H+L+ EPYSS + K  EGE+L  +E TEDIRRADFVDSLL++ NS   TS D    +  E
Sbjct: 475  HRLITEPYSSFIKKLLEGESLAKIEDTEDIRRADFVDSLLNSGNSESNTSVDFMNDALDE 534

Query: 2001 KLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARASLPIA 1822
             LV    QE+ Y+  SA K ER N  K+VES +L+Q+ E K K+Q+Y++ML  RA+LPIA
Sbjct: 535  NLVIPDIQESLYSAASA-KPERKNNRKEVESAYLRQELENKGKVQKYREMLGFRAALPIA 593

Query: 1821 QLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPRRIAAI 1642
            +LKG++L LL+ENDV+VVCGETGCGKTTQVPQFILDDMI +  GGYC+I+CTQPRRIAAI
Sbjct: 594  ELKGNILQLLEENDVLVVCGETGCGKTTQVPQFILDDMIEAGLGGYCNIICTQPRRIAAI 653

Query: 1641 SVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRDLAGIT 1462
            SVAERVA+ERCE          G+QVRLD++RNE+TKLLFCTTGILLRKLAG+++L G+T
Sbjct: 654  SVAERVADERCEPSPGSNGSLVGFQVRLDTARNERTKLLFCTTGILLRKLAGDKNLTGVT 713

Query: 1461 HVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFGNCPVI 1282
            HVIVDEVHERSLL DFLLIVL+NLIE+QS+H+   LKV+LMSATVD+ LFSRYFGNCPV+
Sbjct: 714  HVIVDEVHERSLLSDFLLIVLKNLIEKQSTHQGPKLKVILMSATVDSSLFSRYFGNCPVV 773

Query: 1281 TAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKKNLVLS 1102
            TA+GR+HPVST FLED+YE+L Y+LASDSP SL   TS+K K RS  V NHRGKKNLVLS
Sbjct: 774  TAQGRTHPVSTLFLEDIYENLNYALASDSPASLKCFTSTKGKFRSSTVGNHRGKKNLVLS 833

Query: 1101 SWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDEVYPVG 922
            SWGD+S+LS++YVNP Y+PSSY++YS+RT+ NLK LNEDVIDYDLLEDL+ +IDE YP G
Sbjct: 834  SWGDDSLLSENYVNPYYVPSSYQSYSERTQKNLKCLNEDVIDYDLLEDLVCHIDETYPAG 893

Query: 921  AILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPENIRKVI 742
            +ILVFLPGVAEIY LLDKL ASY+FG L S+WLLPLHSSL+  DQRKVF  PPENIRKVI
Sbjct: 894  SILVFLPGVAEIYTLLDKLVASYQFGGLCSEWLLPLHSSLSSTDQRKVFRQPPENIRKVI 953

Query: 741  VATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRAGRVKP 562
            VATDIAETSITIDDVVYV+DCGKHKE+RYNPQKK+SSMVEDWISQANA+QR GRAGRVKP
Sbjct: 954  VATDIAETSITIDDVVYVVDCGKHKESRYNPQKKLSSMVEDWISQANAKQRRGRAGRVKP 1013

Query: 561  GICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPPRKEAV 382
            GICFCLYT +R E LMRP+QVPEMLRMPL+ELCLQIKSL LG I  FLLKAI+PPR+EA+
Sbjct: 1014 GICFCLYTCHRIENLMRPFQVPEMLRMPLIELCLQIKSLYLGFIKPFLLKAIDPPREEAI 1073

Query: 381  TSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIAAFLSY 202
            TSAI+ LYEVGA+EG EELTPLG+HLAKLPVDVLIGKMMLYG IFGCLSPILSI+AFLSY
Sbjct: 1074 TSAITMLYEVGALEGNEELTPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSISAFLSY 1133

Query: 201  KSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKILHER 28
            KSPFVYPKDEKQN++RAK SLL D+LD  + +D G RQSDHLLM+VAY +W KIL E+
Sbjct: 1134 KSPFVYPKDEKQNIERAKISLLTDRLDGTSGSDEGERQSDHLLMVVAYKRWVKILLEK 1191


>ref|XP_010658001.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X1 [Vitis
            vinifera]
          Length = 1464

 Score = 1393 bits (3606), Expect = 0.0
 Identities = 750/1209 (62%), Positives = 899/1209 (74%), Gaps = 14/1209 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            KLQISAENE       LNSG     S+  P ++ +S+AQKAKKLRS+YEKLSCEGF++D 
Sbjct: 28   KLQISAENENRLRRLLLNSGRSGPASSPAPADDTLSKAQKAKKLRSVYEKLSCEGFSNDH 87

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE ALSAL EGATFE+A              LKFSSGTS  + EG     GSI IISTAR
Sbjct: 88   IELALSALKEGATFESALDWLCFNLSSNELPLKFSSGTSLHANEG-----GSIGIISTAR 142

Query: 3252 ADWAPSQPPPAEV-DDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE--W 3082
             DW PS      + DD++ G+SIR KG RDDD +D  + SQADWIRQY+ QQEE E   W
Sbjct: 143  EDWTPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQQSQADWIRQYVAQQEEDESKTW 202

Query: 3081 XXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKL 2902
                                     +IAKEYH ARL A+ AKEKG+KK QE AG  IRKL
Sbjct: 203  EDDAVDDYSTKKVAEPRSYE-----TIAKEYHAARLEALSAKEKGDKKGQEQAGHIIRKL 257

Query: 2901 KQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSREL--PDEGDV--PESA 2734
            KQE+++LGLSD+ L      +  S    + M  +S P  +P++  L   + G V  P  +
Sbjct: 258  KQELSALGLSDNSLESGFRYEHASGFASEDMSYNSMPEKHPEAITLCEVEGGSVMHPSES 317

Query: 2733 ILDGGPMVEGNMVEQC--GLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPS 2560
              DG        +++C    +LS + S  S +P  L   +  QE+ GDV+ SN F + PS
Sbjct: 318  TFDGS-------IKECFSSTELSMN-SVSSSVP--LEERIAAQEDSGDVELSNFFEDAPS 367

Query: 2559 VSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPK 2380
             S  LP EVLK+Q KE+M +  +G+NL K++ IW+KGDP KIPKAVLHQLCQRSGWEAPK
Sbjct: 368  -SEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQLCQRSGWEAPK 426

Query: 2379 YSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXAL 2200
             +KVLG E GF YAVSVLR +TGRGKSRKAGGL TL+LPDQ E F             AL
Sbjct: 427  LNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAEDAQNAVAAYAL 486

Query: 2199 YRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSA 2020
            Y+LFPDLP+H  + EPY+S V++ +EGE+   +E +E+ RRA FV+S+L   +SG T   
Sbjct: 487  YQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILDAGDSGSTAFV 546

Query: 2019 DV---SFHEKLVKSQDQETTYANVSAE--KAERMNYHKQVESRFLKQDFEGKLKLQRYQK 1855
            DV   S  +K    Q +E    N +    K  R+   K+ ES +LKQ++E K+K+ +Y+ 
Sbjct: 547  DVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEYENKMKIGKYKD 606

Query: 1854 MLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSI 1675
            MLK R+ LPIA+LK  +L +LKE  V+VVCGETG GKTTQVPQFILDDMI +  GGYC+I
Sbjct: 607  MLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMIEAGNGGYCNI 666

Query: 1674 VCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRK 1495
            +CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+ N +TKLLFCTTGILLRK
Sbjct: 667  ICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLLFCTTGILLRK 726

Query: 1494 LAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGL 1315
            LAG+++L+GITHVIVDEVHERSLLGDFLLIVL+NLIE+QS+  T  LKV+LMSATVD+ L
Sbjct: 727  LAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKVILMSATVDSNL 786

Query: 1314 FSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVH 1135
            FSRYFG CPVITA GR+HPVSTYFLED+YE + Y LASDSP S+ Y TS K+K  +  V+
Sbjct: 787  FSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETSIKQK--TSAVN 844

Query: 1134 NHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDL 955
            N RGK+NLVLS+WGD+S+LS+  +NP Y+P++Y++YS++T+ NLK LNEDVIDYDLLEDL
Sbjct: 845  NRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNEDVIDYDLLEDL 904

Query: 954  ISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVF 775
            + Y+DE YP GAILVFLPGVAEIYMLLDKLAASYRF  LSSDWLLPLHSS+A  DQRKVF
Sbjct: 905  VCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIASDDQRKVF 964

Query: 774  MSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANAR 595
            + PPENIRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWISQANA+
Sbjct: 965  LQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISQANAK 1024

Query: 594  QRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLL 415
            QR GRAGRVKPGICF LYT YRFEKL+RP+QVPEMLRMPLVELCLQIK LSLG+I  FL 
Sbjct: 1025 QRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKLLSLGNIKPFLS 1084

Query: 414  KAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLS 235
            KA+EPP +EA+TSAIS LYEVGAIEG+EELTPLG HLAKLPVDVLIGKMMLYG IFGCLS
Sbjct: 1085 KALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1144

Query: 234  PILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYN 55
            PILSI+AFLSYKSPF+ PKDE+QNV+RAK +LL D++D  ++++ G RQSDHL+MMVAY 
Sbjct: 1145 PILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQSDHLVMMVAYK 1204

Query: 54   KWAKILHER 28
            KW +ILHE+
Sbjct: 1205 KWERILHEK 1213


>ref|XP_002263889.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X2 [Vitis
            vinifera] gi|297739540|emb|CBI29722.3| unnamed protein
            product [Vitis vinifera]
          Length = 1458

 Score = 1393 bits (3606), Expect = 0.0
 Identities = 750/1209 (62%), Positives = 899/1209 (74%), Gaps = 14/1209 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            KLQISAENE       LNSG     S+  P ++ +S+AQKAKKLRS+YEKLSCEGF++D 
Sbjct: 28   KLQISAENENRLRRLLLNSGRSGPASSPAPADDTLSKAQKAKKLRSVYEKLSCEGFSNDH 87

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE ALSAL EGATFE+A              LKFSSGTS  + EG     GSI IISTAR
Sbjct: 88   IELALSALKEGATFESALDWLCFNLSSNELPLKFSSGTSLHANEG-----GSIGIISTAR 142

Query: 3252 ADWAPSQPPPAEV-DDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE--W 3082
             DW PS      + DD++ G+SIR KG RDDD +D  + SQADWIRQY+ QQEE E   W
Sbjct: 143  EDWTPSVYSSGNIEDDEVSGISIRIKGRRDDDSVDSRQQSQADWIRQYVAQQEEDESKTW 202

Query: 3081 XXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKL 2902
                                     +IAKEYH ARL A+ AKEKG+KK QE AG  IRKL
Sbjct: 203  EDDAVDDYSTKKVAEPRSYE-----TIAKEYHAARLEALSAKEKGDKKGQEQAGHIIRKL 257

Query: 2901 KQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSREL--PDEGDV--PESA 2734
            KQE+++LGLSD+ L      +  S    + M  +S P  +P++  L   + G V  P  +
Sbjct: 258  KQELSALGLSDNSLESGFRYEHASGFASEDMSYNSMPEKHPEAITLCEVEGGSVMHPSES 317

Query: 2733 ILDGGPMVEGNMVEQC--GLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPS 2560
              DG        +++C    +LS + S  S +P  L   +  QE+ GDV+ SN F + PS
Sbjct: 318  TFDGS-------IKECFSSTELSMN-SVSSSVP--LEERIAAQEDSGDVELSNFFEDAPS 367

Query: 2559 VSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPK 2380
             S  LP EVLK+Q KE+M +  +G+NL K++ IW+KGDP KIPKAVLHQLCQRSGWEAPK
Sbjct: 368  -SEVLPHEVLKLQNKEKMKELSSGKNLEKLEGIWKKGDPQKIPKAVLHQLCQRSGWEAPK 426

Query: 2379 YSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXAL 2200
             +KVLG E GF YAVSVLR +TGRGKSRKAGGL TL+LPDQ E F             AL
Sbjct: 427  LNKVLGKENGFCYAVSVLRKSTGRGKSRKAGGLTTLELPDQLEAFESAEDAQNAVAAYAL 486

Query: 2199 YRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSA 2020
            Y+LFPDLP+H  + EPY+S V++ +EGE+   +E +E+ RRA FV+S+L   +SG T   
Sbjct: 487  YQLFPDLPIHLAITEPYASFVIQWKEGESSIRIEDSEEDRRAGFVNSILDAGDSGSTAFV 546

Query: 2019 DV---SFHEKLVKSQDQETTYANVSAE--KAERMNYHKQVESRFLKQDFEGKLKLQRYQK 1855
            DV   S  +K    Q +E    N +    K  R+   K+ ES +LKQ++E K+K+ +Y+ 
Sbjct: 547  DVTDNSLPKKFQMPQIEENRNLNAAGPDLKPGRVGNFKEAESSYLKQEYENKMKIGKYKD 606

Query: 1854 MLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSI 1675
            MLK R+ LPIA+LK  +L +LKE  V+VVCGETG GKTTQVPQFILDDMI +  GGYC+I
Sbjct: 607  MLKTRSGLPIAELKSEILQVLKEKSVLVVCGETGSGKTTQVPQFILDDMIEAGNGGYCNI 666

Query: 1674 VCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRK 1495
            +CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+ N +TKLLFCTTGILLRK
Sbjct: 667  ICTQPRRIAAISVAERVADERCEPSPGSDGSVVGYQVRLDSASNVRTKLLFCTTGILLRK 726

Query: 1494 LAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGL 1315
            LAG+++L+GITHVIVDEVHERSLLGDFLLIVL+NLIE+QS+  T  LKV+LMSATVD+ L
Sbjct: 727  LAGDKNLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSTDSTPKLKVILMSATVDSNL 786

Query: 1314 FSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVH 1135
            FSRYFG CPVITA GR+HPVSTYFLED+YE + Y LASDSP S+ Y TS K+K  +  V+
Sbjct: 787  FSRYFGGCPVITAVGRTHPVSTYFLEDIYESIDYRLASDSPASIRYETSIKQK--TSAVN 844

Query: 1134 NHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDL 955
            N RGK+NLVLS+WGD+S+LS+  +NP Y+P++Y++YS++T+ NLK LNEDVIDYDLLEDL
Sbjct: 845  NRRGKRNLVLSAWGDDSVLSEECINPYYVPNAYQSYSEKTQQNLKRLNEDVIDYDLLEDL 904

Query: 954  ISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVF 775
            + Y+DE YP GAILVFLPGVAEIYMLLDKLAASYRF  LSSDWLLPLHSS+A  DQRKVF
Sbjct: 905  VCYVDETYPAGAILVFLPGVAEIYMLLDKLAASYRFRGLSSDWLLPLHSSIASDDQRKVF 964

Query: 774  MSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANAR 595
            + PPENIRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWISQANA+
Sbjct: 965  LQPPENIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISQANAK 1024

Query: 594  QRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLL 415
            QR GRAGRVKPGICF LYT YRFEKL+RP+QVPEMLRMPLVELCLQIK LSLG+I  FL 
Sbjct: 1025 QRRGRAGRVKPGICFSLYTHYRFEKLLRPFQVPEMLRMPLVELCLQIKLLSLGNIKPFLS 1084

Query: 414  KAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLS 235
            KA+EPP +EA+TSAIS LYEVGAIEG+EELTPLG HLAKLPVDVLIGKMMLYG IFGCLS
Sbjct: 1085 KALEPPTEEAMTSAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLS 1144

Query: 234  PILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYN 55
            PILSI+AFLSYKSPF+ PKDE+QNV+RAK +LL D++D  ++++ G RQSDHL+MMVAY 
Sbjct: 1145 PILSISAFLSYKSPFLSPKDERQNVERAKLALLTDQVDGASDSNDGARQSDHLVMMVAYK 1204

Query: 54   KWAKILHER 28
            KW +ILHE+
Sbjct: 1205 KWERILHEK 1213


>ref|XP_008781510.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Phoenix dactylifera]
            gi|672116682|ref|XP_008781511.1| PREDICTED: ATP-dependent
            RNA helicase DHX29 [Phoenix dactylifera]
          Length = 1454

 Score = 1377 bits (3565), Expect = 0.0
 Identities = 744/1203 (61%), Positives = 887/1203 (73%), Gaps = 5/1203 (0%)
 Frame = -2

Query: 3624 RPATKLQISAENEXXXXXXXLNSG--TPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCE 3451
            + A KLQISA+NE       LN+    PP  +A     +  SRAQKAK+LR+IY+KLS E
Sbjct: 20   KSAPKLQISADNERRLRRLLLNTERPAPPPAAAAAASTDTASRAQKAKRLRTIYDKLSLE 79

Query: 3450 GFTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSIS 3271
            GF++DQIE+ALSAL EGATFE A              LKFSSG S+ + EG+E    S+ 
Sbjct: 80   GFSADQIEQALSALKEGATFETALDWLCFNTPGNELPLKFSSGASSSTHEGSER---SVK 136

Query: 3270 IISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQ 3091
            IISTAR DW P Q  P E    + GVSI  K  R ++ +DLGK S  DWIRQYM+QQE++
Sbjct: 137  IISTARDDWVPQQHLPDERKKDMPGVSIVIKAQRSEEFLDLGKSSHKDWIRQYMEQQEDE 196

Query: 3090 EEWXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRI 2911
            E+                      SRA SIAKEYH A L AVEAK+KG+KK Q+  G  I
Sbjct: 197  EQ--------QEDEEQQKQEDDPDSRAASIAKEYHHAVLGAVEAKQKGDKKSQDQFGKII 248

Query: 2910 RKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAI 2731
             KLK+E++ LGLS+DIL     D+       ++   DS   ++ DS+     G   + A+
Sbjct: 249  SKLKRELSMLGLSNDILKSGLQDEFLYRSSENI-SCDSTTWVSNDSKTQDSAGGRVDFAV 307

Query: 2730 LDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVST 2551
             +   +V  N+ E   LK   ++    G  D    +  E  E  +++  NLF ED S   
Sbjct: 308  DESKQIVNTNISESFSLK---EIEHTIGRQDKAVSEDGENNEEQELELDNLFSEDLSSGV 364

Query: 2550 TLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSK 2371
             LP E L  QKK++++Q      L  ID+IW+KGDPG+IPKAVL + CQ+ GWE PKYSK
Sbjct: 365  ALPTEFLTQQKKDKLLQFAYEHTLGSIDEIWKKGDPGRIPKAVLQKFCQKLGWEPPKYSK 424

Query: 2370 VLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRL 2191
            +   +  F Y+VSVLRTATGRGKSRKAGGLIT+QLP+  E F             AL +L
Sbjct: 425  LSEKDDKFLYSVSVLRTATGRGKSRKAGGLITIQLPNLEEAFGFVEDAQNKVAAFALCQL 484

Query: 2190 FPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADVS 2011
            FPDLP+ Q++ EPYSS V K Q+ E    LE +EDIRR  F+DSLL+ D S P  S D +
Sbjct: 485  FPDLPLSQMLREPYSSFVSKWQKDECSAKLEDSEDIRRVGFIDSLLNIDTSQPMISMDSN 544

Query: 2010 F---HEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKAR 1840
                 E +VK ++ E    + S EK   M+  +   S +LK++ E K+KL +Y KML+AR
Sbjct: 545  ILFDGENIVKPKNLEGACDDPS-EKG--MSSTEAAASIYLKKELENKMKLPKYMKMLEAR 601

Query: 1839 ASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQP 1660
            A+LPIA+LK   LHLLK+NDV+VVCGETGCGKTTQVPQFILDDMI S QGG C+IVCTQP
Sbjct: 602  AALPIARLKDSFLHLLKDNDVIVVCGETGCGKTTQVPQFILDDMINSGQGGCCNIVCTQP 661

Query: 1659 RRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNR 1480
            RRIAAISVAERV++ERCE          GYQVRLDS+RNEKTKLLFCTTGILLRKLAGN+
Sbjct: 662  RRIAAISVAERVSDERCESSPGSNDSLVGYQVRLDSARNEKTKLLFCTTGILLRKLAGNK 721

Query: 1479 DLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYF 1300
            DLAG++HVIVDEVHERSLLGDFLLIVL++LIE+Q SH+   LKVVLMSATVD+ LFSRYF
Sbjct: 722  DLAGVSHVIVDEVHERSLLGDFLLIVLKDLIERQFSHRRQKLKVVLMSATVDSSLFSRYF 781

Query: 1299 GNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGK 1120
            GNCPVITAEGR+HPVSTYFLEDVYE+L+Y+L SDSP S T+L   K K  S  V NHRGK
Sbjct: 782  GNCPVITAEGRTHPVSTYFLEDVYENLEYNLPSDSPASGTFLIPKKGKPGSRSVDNHRGK 841

Query: 1119 KNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYID 940
            KNLVLSSWGDES+LS+ YVNP Y+P  +E+YS+RTR NLK LNEDVID+DLLEDLISYID
Sbjct: 842  KNLVLSSWGDESLLSEDYVNPCYIPDFFESYSERTRQNLKHLNEDVIDFDLLEDLISYID 901

Query: 939  EVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPE 760
            E YP+GAILVFLPGVAEI +L+DKL AS+RFG +SSDW+LPLHSSLA  DQ KVF+SPP+
Sbjct: 902  ENYPLGAILVFLPGVAEIDLLVDKLTASFRFGGVSSDWVLPLHSSLASTDQIKVFLSPPQ 961

Query: 759  NIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGR 580
            NIRKVIVATDIAETSITIDDVVYV+D G+HKENRYNP KKMSS+VEDWIS+ANA+QR GR
Sbjct: 962  NIRKVIVATDIAETSITIDDVVYVVDTGRHKENRYNPHKKMSSIVEDWISRANAKQRRGR 1021

Query: 579  AGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEP 400
            AGRVKPGICFCLYT YRFEKLMRP+QVPEMLRMPL ELCLQIKSLSLGDI SFLLKAIE 
Sbjct: 1022 AGRVKPGICFCLYTCYRFEKLMRPFQVPEMLRMPLTELCLQIKSLSLGDIKSFLLKAIET 1081

Query: 399  PRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSI 220
            PR++ ++SAI  LY+VGA EG+E L+PLG+HLAKLPVDVLIGKMMLYG +FGCLSPILSI
Sbjct: 1082 PREDVISSAIDLLYKVGAFEGDEVLSPLGYHLAKLPVDVLIGKMMLYGAVFGCLSPILSI 1141

Query: 219  AAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKI 40
            AAFLSYK PFVYPKDEKQNV+RAKS+LL++ LDN   ++ GN++SDHLLM+VAYNKWA+I
Sbjct: 1142 AAFLSYKFPFVYPKDEKQNVERAKSALLSESLDNILASNEGNKESDHLLMVVAYNKWARI 1201

Query: 39   LHE 31
            LHE
Sbjct: 1202 LHE 1204


>ref|XP_010930827.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Elaeis guineensis]
          Length = 1451

 Score = 1373 bits (3553), Expect = 0.0
 Identities = 741/1202 (61%), Positives = 884/1202 (73%), Gaps = 4/1202 (0%)
 Frame = -2

Query: 3624 RPATKLQISAENEXXXXXXXLNSGTP-PVTSAGPPPENPISRAQKAKKLRSIYEKLSCEG 3448
            +PA KLQISA+NE       LN+  P P  +A P P +  SRAQKAK+LRSIY+KLS EG
Sbjct: 18   KPAPKLQISADNERRLRRLLLNTERPAPPPAAAPAPADTASRAQKAKRLRSIYDKLSLEG 77

Query: 3447 FTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISI 3268
            F+SDQIE+ALSAL EGATFE A              LKFSSG S+ + EGAE    S+ I
Sbjct: 78   FSSDQIEQALSALKEGATFETALDWLCFNIPGNELPLKFSSGVSSSTHEGAER---SVKI 134

Query: 3267 ISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQE 3088
            ISTAR DW P Q  P E    + GVSI  K  R ++ +DLGK S  DWIRQYM+QQE++E
Sbjct: 135  ISTARDDWVPQQRLPDETKKGMPGVSIVIKAQRSEESLDLGKSSHKDWIRQYMEQQEDKE 194

Query: 3087 EWXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIR 2908
            +                      SRA SIAKEYH A L AVEAK KG+KK Q+  G  I 
Sbjct: 195  Q--------QEDEEQQKQEDDPNSRAASIAKEYHHAMLGAVEAKRKGDKKSQDQFGKIIS 246

Query: 2907 KLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAIL 2728
            KLKQE++ LGLS DIL+    D  +     ++   DS   ++ DS+     GD  + A  
Sbjct: 247  KLKQELSILGLSHDILMSGPQDGFSYRSSEEI-SCDSTTWVSNDSKTQDSAGDQVDFAAD 305

Query: 2727 DGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTT 2548
            +   +V  N+ E   LK   ++   SG  D    +  E  E  +++  NLF ED S    
Sbjct: 306  ESKQIVNTNISESFSLK---EIKHASGHRDKAVSEDGESNEEQELELDNLFSEDLSSGAA 362

Query: 2547 LPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKV 2368
            LP E +  QK +++ Q + G +L  ID+IW+KGDPG+IPKA+L +LCQ+ GWE PKY K+
Sbjct: 363  LPTEFMTQQKNDKLPQFIYGHSLGNIDEIWKKGDPGRIPKAILQKLCQKLGWEPPKYGKL 422

Query: 2367 LGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLF 2188
                  F Y+VSVLRTATGRGKSRKAGGLIT+Q P+  E F             AL +LF
Sbjct: 423  SEKGDKFLYSVSVLRTATGRGKSRKAGGLITIQPPNLDEAFGFVEDAQNKVAAFALCQLF 482

Query: 2187 PDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSAD--- 2017
            PDLP+ Q++ EPYSS V K Q+ E  T LE +EDIRRA FVDSLL+ D S P  S D   
Sbjct: 483  PDLPLSQMLREPYSSFVSKWQKDELSTKLEDSEDIRRAGFVDSLLNVDTSQPMISMDSNI 542

Query: 2016 VSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARA 1837
            +S  E +++ Q  E    + S +    M+  ++  S +L+++ E K+KL +Y KML+ARA
Sbjct: 543  LSDGENMIEPQKLEGACDDPSGKG---MDSTEEAASIYLQKELESKMKLPKYMKMLEARA 599

Query: 1836 SLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPR 1657
            +LPIA+LK + LHLLK+NDV+VVCGETGCGKTTQVPQFILDDMI S  GG C+IVCTQPR
Sbjct: 600  ALPIAKLKDNFLHLLKDNDVIVVCGETGCGKTTQVPQFILDDMINSGLGGCCNIVCTQPR 659

Query: 1656 RIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRD 1477
            R+AAISVAERV++ERCE          GYQVRLDS+RNEKT+LLFCTTGILLRKLAGN+D
Sbjct: 660  RLAAISVAERVSDERCESSPGSNDSLVGYQVRLDSARNEKTRLLFCTTGILLRKLAGNKD 719

Query: 1476 LAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFG 1297
            LAGITHVIVDEVHERSLLGDFLLIVL++LI +Q+SH+   LKVVLMSATVD+ LFSRYFG
Sbjct: 720  LAGITHVIVDEVHERSLLGDFLLIVLKDLIGRQASHRRQKLKVVLMSATVDSSLFSRYFG 779

Query: 1296 NCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKK 1117
            +CPVITAEGR+HPVSTYFLEDVYE L+Y L SDSP S T+L  +K K  S  V N RGKK
Sbjct: 780  DCPVITAEGRTHPVSTYFLEDVYEKLEYHLPSDSPASGTFLMPNKGKPGSSSVDNRRGKK 839

Query: 1116 NLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDE 937
            NLVLSSWGDES+L + YVNP Y+P  +E YS++TR NLK LNEDVID+D+LEDLISYIDE
Sbjct: 840  NLVLSSWGDESLLFEDYVNPCYIPDFFECYSEQTRQNLKRLNEDVIDFDVLEDLISYIDE 899

Query: 936  VYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPEN 757
             YP GAILVFLPGVAEI +L+DKL AS+RFG +SSDW+LPLHSSLA  DQRKVF+SPP+N
Sbjct: 900  NYPPGAILVFLPGVAEIDLLVDKLTASFRFGGVSSDWVLPLHSSLASTDQRKVFVSPPQN 959

Query: 756  IRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRA 577
            IRKVIVATDIAETSITIDDVVYV+D G+HKENRYNP KKMSS+VEDWIS ANA+QR GRA
Sbjct: 960  IRKVIVATDIAETSITIDDVVYVVDTGRHKENRYNPHKKMSSIVEDWISWANAKQRRGRA 1019

Query: 576  GRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPP 397
            GRVKPGICFCLYTRYRFEKLMRP+QVPEMLRMPL ELCLQIKSLSLGDI SFLLKAIE P
Sbjct: 1020 GRVKPGICFCLYTRYRFEKLMRPFQVPEMLRMPLTELCLQIKSLSLGDIKSFLLKAIETP 1079

Query: 396  RKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIA 217
            R++ ++SAI  LY+VGA +G+E L+PLG+HLAKLPVDVLIGKMMLYG +FGCLSPILSIA
Sbjct: 1080 REDVISSAIDLLYKVGAFQGDEVLSPLGYHLAKLPVDVLIGKMMLYGAVFGCLSPILSIA 1139

Query: 216  AFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKIL 37
            AFLSYK PFVYPKDEKQ V+RAKS+LL++ LDN   ++  N++SDHLLM+VAYNKWA+IL
Sbjct: 1140 AFLSYKFPFVYPKDEKQYVERAKSALLSESLDNILASNEENKESDHLLMVVAYNKWARIL 1199

Query: 36   HE 31
             E
Sbjct: 1200 RE 1201


>ref|XP_007041296.1| ATP-dependent RNA helicase, putative isoform 3 [Theobroma cacao]
            gi|508705231|gb|EOX97127.1| ATP-dependent RNA helicase,
            putative isoform 3 [Theobroma cacao]
          Length = 1305

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 735/1207 (60%), Positives = 896/1207 (74%), Gaps = 10/1207 (0%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGPPP-ENPISRAQKAKKLRSIYEKLSCEGFT 3442
            A +LQISAENE       LNSG    +     P ++ +S+ QKAKKL+++YEKLSCEGF+
Sbjct: 28   APRLQISAENENRLRRLLLNSGHSAQSQTDSNPVQDSLSKPQKAKKLKAVYEKLSCEGFS 87

Query: 3441 SDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIIS 3262
            +DQIE ALS+L +GATFEAA              LKFSSGTS  S    +G  G IS+IS
Sbjct: 88   NDQIEFALSSLKDGATFEAALDWLCLNLPQNELPLKFSSGTSFQS----DG--GPISVIS 141

Query: 3261 TARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE- 3085
                DW PS      + + + G+S+RTKGS D+D ++  +PSQADWIRQYM+QQEE E  
Sbjct: 142  FKHEDWTPSVDASTRIKENLQGLSVRTKGSADEDSLNTCQPSQADWIRQYMEQQEEDESK 201

Query: 3084 -WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIR 2908
             W                          IAKEYH ARL A  AKE+G+KK QE AG  IR
Sbjct: 202  TWEDETSDEDSVKEVSGPRPYDV-----IAKEYHAARLEATNAKERGDKKGQEKAGNIIR 256

Query: 2907 KLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEG-DVPESAI 2731
            KLKQE+++LGLSDDIL      +  S C+ + M   S P  +P+   L DEG D   S +
Sbjct: 257  KLKQELSALGLSDDILASDFLYERASACVSEGMLTRSIPAEHPEVISLGDEGGDSAASVM 316

Query: 2730 LDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGV-DVQEQEEPGDVDFSNLFCEDPSVS 2554
              G    + N  E      SE+ S  S IP LL   +V  +    DV+  + F ED S +
Sbjct: 317  FFGEATDDVNDTES-----SEEFSTKS-IPSLLPAQEVVSENMSEDVEIGDFFLEDDSTN 370

Query: 2553 TTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYS 2374
              L  EVLK+QKKE+M +  + +NL K+D IW+KG+P KIPKAVLHQLCQRSGWEAPK++
Sbjct: 371  DALLSEVLKLQKKEKMKELYSEKNLEKLDGIWKKGEPKKIPKAVLHQLCQRSGWEAPKFN 430

Query: 2373 KVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYR 2194
            K+ G    F+Y+VSVLR A+GRGKSRKAGGLITLQLP + E F             AL +
Sbjct: 431  KMPGKGKTFAYSVSVLRKASGRGKSRKAGGLITLQLPHEQEAFESAEDAQNRVAAYALCQ 490

Query: 2193 LFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS-----GPT 2029
            LFPDLP+  +V EPYSSL  + +EGE+LT +E +E+ RRA FVD LL+ D+S        
Sbjct: 491  LFPDLPIQLVVTEPYSSLSFRWKEGESLTKIEDSEEDRRAGFVDWLLNADDSRLKAPSDN 550

Query: 2028 TSADVSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKML 1849
             SA   F +  +  ++ +T  + V+   AER ++ K+VES +L+Q+ E + K Q+Y++ML
Sbjct: 551  KSALDEFQKPYI--EENKTLSSAVADPIAERTSHAKEVESLYLRQEEENRKKTQKYKEML 608

Query: 1848 KARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVC 1669
            K RA+LPIA LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S +GG+C+IVC
Sbjct: 609  KTRAALPIAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGRGGHCNIVC 668

Query: 1668 TQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLA 1489
            TQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILLRKL 
Sbjct: 669  TQPRRIAAISVAERVADERCEPSPGSNGSLVGYQVRLDNARNEKTKLLFCTTGILLRKLV 728

Query: 1488 GNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFS 1309
            G++ L G++H+IVDEVHERSLLGDFLLIVL+NLIE+QS+H T  LKV+LMSATVD+ LFS
Sbjct: 729  GDKSLTGVSHIIVDEVHERSLLGDFLLIVLKNLIEKQSAHGTPKLKVILMSATVDSDLFS 788

Query: 1308 RYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNH 1129
            RYFG CPVITA+GR+H V+T FLED+YE + Y LASDSP SL Y TS+K+   SGPV+N 
Sbjct: 789  RYFGFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDM--SGPVNNR 846

Query: 1128 RGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLIS 949
            RGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE L+ 
Sbjct: 847  RGKKNLVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVC 906

Query: 948  YIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMS 769
            ++DE    GAIL+FLPGV EIY LLD+LAASY+FG  SSDWLLPLHSS+A ++Q+KVF++
Sbjct: 907  HVDETCGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLN 966

Query: 768  PPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQR 589
            PP  IRKVI+AT++AETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+ANA+QR
Sbjct: 967  PPNGIRKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQR 1026

Query: 588  CGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKA 409
             GRAGRVKPGICFCLYT++RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  FL KA
Sbjct: 1027 RGRAGRVKPGICFCLYTQHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKA 1086

Query: 408  IEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPI 229
            +EPP++EA+ SAIS LYEVGAIEG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGCLSPI
Sbjct: 1087 LEPPKEEAMNSAISLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPI 1146

Query: 228  LSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKW 49
            LSI+AFLSYKSPF+YPKDEKQNV+RAK +LL+DKLD  ++++ G+RQSDHLLMMVAY KW
Sbjct: 1147 LSISAFLSYKSPFLYPKDEKQNVERAKLALLSDKLDGSSDSNDGDRQSDHLLMMVAYRKW 1206

Query: 48   AKILHER 28
             KIL E+
Sbjct: 1207 EKILREK 1213


>ref|XP_007041294.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
            gi|590682240|ref|XP_007041295.1| ATP-dependent RNA
            helicase, putative isoform 1 [Theobroma cacao]
            gi|508705229|gb|EOX97125.1| ATP-dependent RNA helicase,
            putative isoform 1 [Theobroma cacao]
            gi|508705230|gb|EOX97126.1| ATP-dependent RNA helicase,
            putative isoform 1 [Theobroma cacao]
          Length = 1457

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 735/1207 (60%), Positives = 896/1207 (74%), Gaps = 10/1207 (0%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGPPP-ENPISRAQKAKKLRSIYEKLSCEGFT 3442
            A +LQISAENE       LNSG    +     P ++ +S+ QKAKKL+++YEKLSCEGF+
Sbjct: 28   APRLQISAENENRLRRLLLNSGHSAQSQTDSNPVQDSLSKPQKAKKLKAVYEKLSCEGFS 87

Query: 3441 SDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIIS 3262
            +DQIE ALS+L +GATFEAA              LKFSSGTS  S    +G  G IS+IS
Sbjct: 88   NDQIEFALSSLKDGATFEAALDWLCLNLPQNELPLKFSSGTSFQS----DG--GPISVIS 141

Query: 3261 TARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE- 3085
                DW PS      + + + G+S+RTKGS D+D ++  +PSQADWIRQYM+QQEE E  
Sbjct: 142  FKHEDWTPSVDASTRIKENLQGLSVRTKGSADEDSLNTCQPSQADWIRQYMEQQEEDESK 201

Query: 3084 -WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIR 2908
             W                          IAKEYH ARL A  AKE+G+KK QE AG  IR
Sbjct: 202  TWEDETSDEDSVKEVSGPRPYDV-----IAKEYHAARLEATNAKERGDKKGQEKAGNIIR 256

Query: 2907 KLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEG-DVPESAI 2731
            KLKQE+++LGLSDDIL      +  S C+ + M   S P  +P+   L DEG D   S +
Sbjct: 257  KLKQELSALGLSDDILASDFLYERASACVSEGMLTRSIPAEHPEVISLGDEGGDSAASVM 316

Query: 2730 LDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGV-DVQEQEEPGDVDFSNLFCEDPSVS 2554
              G    + N  E      SE+ S  S IP LL   +V  +    DV+  + F ED S +
Sbjct: 317  FFGEATDDVNDTES-----SEEFSTKS-IPSLLPAQEVVSENMSEDVEIGDFFLEDDSTN 370

Query: 2553 TTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYS 2374
              L  EVLK+QKKE+M +  + +NL K+D IW+KG+P KIPKAVLHQLCQRSGWEAPK++
Sbjct: 371  DALLSEVLKLQKKEKMKELYSEKNLEKLDGIWKKGEPKKIPKAVLHQLCQRSGWEAPKFN 430

Query: 2373 KVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYR 2194
            K+ G    F+Y+VSVLR A+GRGKSRKAGGLITLQLP + E F             AL +
Sbjct: 431  KMPGKGKTFAYSVSVLRKASGRGKSRKAGGLITLQLPHEQEAFESAEDAQNRVAAYALCQ 490

Query: 2193 LFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS-----GPT 2029
            LFPDLP+  +V EPYSSL  + +EGE+LT +E +E+ RRA FVD LL+ D+S        
Sbjct: 491  LFPDLPIQLVVTEPYSSLSFRWKEGESLTKIEDSEEDRRAGFVDWLLNADDSRLKAPSDN 550

Query: 2028 TSADVSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKML 1849
             SA   F +  +  ++ +T  + V+   AER ++ K+VES +L+Q+ E + K Q+Y++ML
Sbjct: 551  KSALDEFQKPYI--EENKTLSSAVADPIAERTSHAKEVESLYLRQEEENRKKTQKYKEML 608

Query: 1848 KARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVC 1669
            K RA+LPIA LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S +GG+C+IVC
Sbjct: 609  KTRAALPIAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGRGGHCNIVC 668

Query: 1668 TQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLA 1489
            TQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILLRKL 
Sbjct: 669  TQPRRIAAISVAERVADERCEPSPGSNGSLVGYQVRLDNARNEKTKLLFCTTGILLRKLV 728

Query: 1488 GNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFS 1309
            G++ L G++H+IVDEVHERSLLGDFLLIVL+NLIE+QS+H T  LKV+LMSATVD+ LFS
Sbjct: 729  GDKSLTGVSHIIVDEVHERSLLGDFLLIVLKNLIEKQSAHGTPKLKVILMSATVDSDLFS 788

Query: 1308 RYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNH 1129
            RYFG CPVITA+GR+H V+T FLED+YE + Y LASDSP SL Y TS+K+   SGPV+N 
Sbjct: 789  RYFGFCPVITAQGRTHAVTTCFLEDIYESINYHLASDSPASLRYETSTKDM--SGPVNNR 846

Query: 1128 RGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLIS 949
            RGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE L+ 
Sbjct: 847  RGKKNLVLSAWGDDSLLSEDYVNPHYDSSSYQSYSEQTQKNLKRLNEDVIDYDLLEYLVC 906

Query: 948  YIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMS 769
            ++DE    GAIL+FLPGV EIY LLD+LAASY+FG  SSDWLLPLHSS+A ++Q+KVF++
Sbjct: 907  HVDETCGEGAILIFLPGVVEIYTLLDRLAASYQFGGPSSDWLLPLHSSIASSEQKKVFLN 966

Query: 768  PPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQR 589
            PP  IRKVI+AT++AETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+ANA+QR
Sbjct: 967  PPNGIRKVIIATNVAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANAKQR 1026

Query: 588  CGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKA 409
             GRAGRVKPGICFCLYT++RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  FL KA
Sbjct: 1027 RGRAGRVKPGICFCLYTQHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKA 1086

Query: 408  IEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPI 229
            +EPP++EA+ SAIS LYEVGAIEG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGCLSPI
Sbjct: 1087 LEPPKEEAMNSAISLLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPI 1146

Query: 228  LSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKW 49
            LSI+AFLSYKSPF+YPKDEKQNV+RAK +LL+DKLD  ++++ G+RQSDHLLMMVAY KW
Sbjct: 1147 LSISAFLSYKSPFLYPKDEKQNVERAKLALLSDKLDGSSDSNDGDRQSDHLLMMVAYRKW 1206

Query: 48   AKILHER 28
             KIL E+
Sbjct: 1207 EKILREK 1213


>ref|XP_011028324.1| PREDICTED: ATP-dependent RNA helicase Dhx29 isoform X3 [Populus
            euphratica]
          Length = 1307

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 728/1210 (60%), Positives = 888/1210 (73%), Gaps = 15/1210 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGT-PPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSD 3436
            +LQISAENE       LNS T PPV +      N +S+AQKAKKL++IYEKLSCEGF++D
Sbjct: 30   RLQISAENENRLRRLLLNSTTTPPVQTTATDNTNSLSKAQKAKKLKNIYEKLSCEGFSND 89

Query: 3435 QIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTA 3256
             IE ALS+L + ATFE A              LKFS GTS  S  G      S+S++STA
Sbjct: 90   HIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRG------SVSVVSTA 143

Query: 3255 RADWAP----SQPPPAEVDDQILGVSIRTKGSRDD---DVMDLGKPSQADWIRQYMKQQE 3097
            R DW P    S+    E ++Q + V  + +   +D   +V+D  +PSQADWIRQY++QQE
Sbjct: 144  REDWVPYVDSSRRIEGEEEEQRVLVRAKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQE 203

Query: 3096 EQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELA 2923
            E+E   W                          IAKEYH  RL A +AKEKG+KK QE A
Sbjct: 204  EEESKTWEDDSVDGSFTNKDPQPRTYDV-----IAKEYHAVRLEATKAKEKGDKKSQEQA 258

Query: 2922 GLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEG-DV 2746
            G  IRKLKQEM++LGLS D+L    G            Q  SE +    S   P E  + 
Sbjct: 259  GHAIRKLKQEMSALGLSLDLLEQDFGH-----------QHVSEDMF---STSTPCEHLEA 304

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPD----LLGVDVQEQEEPGDVDFSNL 2578
              S  ++G   +  ++V++  L+ S  +  PS +      L G  V E+ E  DV+  + 
Sbjct: 305  ITSLDVEGDSTIVESIVDENDLESSSSIGFPSNLVPSSVPLKGEIVSEELE--DVEIGDF 362

Query: 2577 FCEDPSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRS 2398
            F +D S +  L P +L++QK+E+M +  + +NL K++ IW+KGDP KIPKAVLHQLCQ+S
Sbjct: 363  FIDDASSNDALAPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKS 422

Query: 2397 GWEAPKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXX 2218
            GWEAPK++KVL  E  FSYAVS+LR A+GRGKSRKAGGLITLQLPDQ ETF         
Sbjct: 423  GWEAPKFNKVLERELRFSYAVSILRKASGRGKSRKAGGLITLQLPDQDETFESAEDAQNR 482

Query: 2217 XXXXALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS 2038
                AL++LFPDLP+H  ++ PYSSLV++ + GET   +E + + RRA FVD LL  D S
Sbjct: 483  VAAFALHQLFPDLPIHLAIINPYSSLVLQWKRGETSKRVEDSVEDRRAGFVDLLLKADGS 542

Query: 2037 GPTTSADVSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQ 1858
              +     +  ++ +K  D E T  + + +K +R  Y K  ES +L+Q+ E K KL++Y+
Sbjct: 543  SSSAVDATTSSQETLKITDIEETKDSGADKKVDRKKYAKDAESSYLRQEQESKRKLKKYK 602

Query: 1857 KMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCS 1678
            +ML +RA+LPIA LK  +L +LKENDV+VVCGETG GKTTQVPQFILDDMI S  GG C+
Sbjct: 603  EMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCN 662

Query: 1677 IVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLR 1498
            I+CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+RNEKTKLLFCTTGILLR
Sbjct: 663  IICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLR 722

Query: 1497 KLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAG 1318
            KLAG+R L+GITHVIVDEVHERSLLGDFLLIVL+NLIE+QSS  T  LKV+LMSATVD+ 
Sbjct: 723  KLAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSN 782

Query: 1317 LFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPV 1138
            LFSRYFG CPV+TA+GR+HPV+ YFLED+YE + Y+LASD+P +L Y TS+ +K  SGPV
Sbjct: 783  LFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAIDK--SGPV 840

Query: 1137 HNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLED 958
             NHRGKKNLVLS+WGD+S LS+  +NP+Y+ +SY+TYS++T+ NLK LNE++IDYDLLED
Sbjct: 841  DNHRGKKNLVLSAWGDDSQLSEDCINPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLED 900

Query: 957  LISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKV 778
            LI Y+DE    GAIL+FLPGV+EIYMLLD+L ASYRFG  SSDW+LPLHSS+A  DQ+KV
Sbjct: 901  LICYVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKV 960

Query: 777  FMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANA 598
            F+ PP+NIRKVI+AT+IAETS+TIDDVVYVIDCGKHKENRYNPQKK++SMVEDWISQANA
Sbjct: 961  FLWPPDNIRKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANA 1020

Query: 597  RQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFL 418
            RQR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVEL LQIK LSLG I  FL
Sbjct: 1021 RQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFL 1080

Query: 417  LKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCL 238
             KA+EPPR+EA+TSAIS LYEVGA+EG+E+LTPLG HLAKLPVDVLIGKM+LYG IFGCL
Sbjct: 1081 SKALEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCL 1140

Query: 237  SPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAY 58
            SPILSI+AFLSYKSPFVYPKDEKQNV+RAK +LLADK+D  N+++  +R SDHLLMMVAY
Sbjct: 1141 SPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAY 1200

Query: 57   NKWAKILHER 28
             KW KIL ER
Sbjct: 1201 KKWEKILSER 1210


>ref|XP_011028323.1| PREDICTED: ATP-dependent RNA helicase Dhx29 isoform X2 [Populus
            euphratica]
          Length = 1368

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 728/1210 (60%), Positives = 888/1210 (73%), Gaps = 15/1210 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGT-PPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSD 3436
            +LQISAENE       LNS T PPV +      N +S+AQKAKKL++IYEKLSCEGF++D
Sbjct: 30   RLQISAENENRLRRLLLNSTTTPPVQTTATDNTNSLSKAQKAKKLKNIYEKLSCEGFSND 89

Query: 3435 QIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTA 3256
             IE ALS+L + ATFE A              LKFS GTS  S  G      S+S++STA
Sbjct: 90   HIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRG------SVSVVSTA 143

Query: 3255 RADWAP----SQPPPAEVDDQILGVSIRTKGSRDD---DVMDLGKPSQADWIRQYMKQQE 3097
            R DW P    S+    E ++Q + V  + +   +D   +V+D  +PSQADWIRQY++QQE
Sbjct: 144  REDWVPYVDSSRRIEGEEEEQRVLVRAKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQE 203

Query: 3096 EQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELA 2923
            E+E   W                          IAKEYH  RL A +AKEKG+KK QE A
Sbjct: 204  EEESKTWEDDSVDGSFTNKDPQPRTYDV-----IAKEYHAVRLEATKAKEKGDKKSQEQA 258

Query: 2922 GLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEG-DV 2746
            G  IRKLKQEM++LGLS D+L    G            Q  SE +    S   P E  + 
Sbjct: 259  GHAIRKLKQEMSALGLSLDLLEQDFGH-----------QHVSEDMF---STSTPCEHLEA 304

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPD----LLGVDVQEQEEPGDVDFSNL 2578
              S  ++G   +  ++V++  L+ S  +  PS +      L G  V E+ E  DV+  + 
Sbjct: 305  ITSLDVEGDSTIVESIVDENDLESSSSIGFPSNLVPSSVPLKGEIVSEELE--DVEIGDF 362

Query: 2577 FCEDPSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRS 2398
            F +D S +  L P +L++QK+E+M +  + +NL K++ IW+KGDP KIPKAVLHQLCQ+S
Sbjct: 363  FIDDASSNDALAPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKS 422

Query: 2397 GWEAPKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXX 2218
            GWEAPK++KVL  E  FSYAVS+LR A+GRGKSRKAGGLITLQLPDQ ETF         
Sbjct: 423  GWEAPKFNKVLERELRFSYAVSILRKASGRGKSRKAGGLITLQLPDQDETFESAEDAQNR 482

Query: 2217 XXXXALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS 2038
                AL++LFPDLP+H  ++ PYSSLV++ + GET   +E + + RRA FVD LL  D S
Sbjct: 483  VAAFALHQLFPDLPIHLAIINPYSSLVLQWKRGETSKRVEDSVEDRRAGFVDLLLKADGS 542

Query: 2037 GPTTSADVSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQ 1858
              +     +  ++ +K  D E T  + + +K +R  Y K  ES +L+Q+ E K KL++Y+
Sbjct: 543  SSSAVDATTSSQETLKITDIEETKDSGADKKVDRKKYAKDAESSYLRQEQESKRKLKKYK 602

Query: 1857 KMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCS 1678
            +ML +RA+LPIA LK  +L +LKENDV+VVCGETG GKTTQVPQFILDDMI S  GG C+
Sbjct: 603  EMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCN 662

Query: 1677 IVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLR 1498
            I+CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+RNEKTKLLFCTTGILLR
Sbjct: 663  IICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLR 722

Query: 1497 KLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAG 1318
            KLAG+R L+GITHVIVDEVHERSLLGDFLLIVL+NLIE+QSS  T  LKV+LMSATVD+ 
Sbjct: 723  KLAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSN 782

Query: 1317 LFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPV 1138
            LFSRYFG CPV+TA+GR+HPV+ YFLED+YE + Y+LASD+P +L Y TS+ +K  SGPV
Sbjct: 783  LFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAIDK--SGPV 840

Query: 1137 HNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLED 958
             NHRGKKNLVLS+WGD+S LS+  +NP+Y+ +SY+TYS++T+ NLK LNE++IDYDLLED
Sbjct: 841  DNHRGKKNLVLSAWGDDSQLSEDCINPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLED 900

Query: 957  LISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKV 778
            LI Y+DE    GAIL+FLPGV+EIYMLLD+L ASYRFG  SSDW+LPLHSS+A  DQ+KV
Sbjct: 901  LICYVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKV 960

Query: 777  FMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANA 598
            F+ PP+NIRKVI+AT+IAETS+TIDDVVYVIDCGKHKENRYNPQKK++SMVEDWISQANA
Sbjct: 961  FLWPPDNIRKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANA 1020

Query: 597  RQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFL 418
            RQR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVEL LQIK LSLG I  FL
Sbjct: 1021 RQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFL 1080

Query: 417  LKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCL 238
             KA+EPPR+EA+TSAIS LYEVGA+EG+E+LTPLG HLAKLPVDVLIGKM+LYG IFGCL
Sbjct: 1081 SKALEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCL 1140

Query: 237  SPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAY 58
            SPILSI+AFLSYKSPFVYPKDEKQNV+RAK +LLADK+D  N+++  +R SDHLLMMVAY
Sbjct: 1141 SPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAY 1200

Query: 57   NKWAKILHER 28
             KW KIL ER
Sbjct: 1201 KKWEKILSER 1210


>ref|XP_011028322.1| PREDICTED: ATP-dependent RNA helicase Dhx29 isoform X1 [Populus
            euphratica]
          Length = 1455

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 728/1210 (60%), Positives = 888/1210 (73%), Gaps = 15/1210 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGT-PPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSD 3436
            +LQISAENE       LNS T PPV +      N +S+AQKAKKL++IYEKLSCEGF++D
Sbjct: 30   RLQISAENENRLRRLLLNSTTTPPVQTTATDNTNSLSKAQKAKKLKNIYEKLSCEGFSND 89

Query: 3435 QIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTA 3256
             IE ALS+L + ATFE A              LKFS GTS  S  G      S+S++STA
Sbjct: 90   HIELALSSLKDNATFETALDWLCLNLAGNELPLKFSGGTSLNSDRG------SVSVVSTA 143

Query: 3255 RADWAP----SQPPPAEVDDQILGVSIRTKGSRDD---DVMDLGKPSQADWIRQYMKQQE 3097
            R DW P    S+    E ++Q + V  + +   +D   +V+D  +PSQADWIRQY++QQE
Sbjct: 144  REDWVPYVDSSRRIEGEEEEQRVLVRAKARWDEEDGDGNVLDFRQPSQADWIRQYVEQQE 203

Query: 3096 EQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELA 2923
            E+E   W                          IAKEYH  RL A +AKEKG+KK QE A
Sbjct: 204  EEESKTWEDDSVDGSFTNKDPQPRTYDV-----IAKEYHAVRLEATKAKEKGDKKSQEQA 258

Query: 2922 GLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEG-DV 2746
            G  IRKLKQEM++LGLS D+L    G            Q  SE +    S   P E  + 
Sbjct: 259  GHAIRKLKQEMSALGLSLDLLEQDFGH-----------QHVSEDMF---STSTPCEHLEA 304

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPD----LLGVDVQEQEEPGDVDFSNL 2578
              S  ++G   +  ++V++  L+ S  +  PS +      L G  V E+ E  DV+  + 
Sbjct: 305  ITSLDVEGDSTIVESIVDENDLESSSSIGFPSNLVPSSVPLKGEIVSEELE--DVEIGDF 362

Query: 2577 FCEDPSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRS 2398
            F +D S +  L P +L++QK+E+M +  + +NL K++ IW+KGDP KIPKAVLHQLCQ+S
Sbjct: 363  FIDDASSNDALAPGILELQKREKMRELCSEKNLEKLEGIWKKGDPQKIPKAVLHQLCQKS 422

Query: 2397 GWEAPKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXX 2218
            GWEAPK++KVL  E  FSYAVS+LR A+GRGKSRKAGGLITLQLPDQ ETF         
Sbjct: 423  GWEAPKFNKVLERELRFSYAVSILRKASGRGKSRKAGGLITLQLPDQDETFESAEDAQNR 482

Query: 2217 XXXXALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS 2038
                AL++LFPDLP+H  ++ PYSSLV++ + GET   +E + + RRA FVD LL  D S
Sbjct: 483  VAAFALHQLFPDLPIHLAIINPYSSLVLQWKRGETSKRVEDSVEDRRAGFVDLLLKADGS 542

Query: 2037 GPTTSADVSFHEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQ 1858
              +     +  ++ +K  D E T  + + +K +R  Y K  ES +L+Q+ E K KL++Y+
Sbjct: 543  SSSAVDATTSSQETLKITDIEETKDSGADKKVDRKKYAKDAESSYLRQEQESKRKLKKYK 602

Query: 1857 KMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCS 1678
            +ML +RA+LPIA LK  +L +LKENDV+VVCGETG GKTTQVPQFILDDMI S  GG C+
Sbjct: 603  EMLCSRAALPIAGLKVDILQMLKENDVLVVCGETGSGKTTQVPQFILDDMIESGHGGNCN 662

Query: 1677 IVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLR 1498
            I+CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+RNEKTKLLFCTTGILLR
Sbjct: 663  IICTQPRRIAAISVAERVADERCEPSPGAVGSLVGYQVRLDSARNEKTKLLFCTTGILLR 722

Query: 1497 KLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAG 1318
            KLAG+R L+GITHVIVDEVHERSLLGDFLLIVL+NLIE+QSS  T  LKV+LMSATVD+ 
Sbjct: 723  KLAGDRSLSGITHVIVDEVHERSLLGDFLLIVLKNLIEKQSSQDTPKLKVILMSATVDSN 782

Query: 1317 LFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPV 1138
            LFSRYFG CPV+TA+GR+HPV+ YFLED+YE + Y+LASD+P +L Y TS+ +K  SGPV
Sbjct: 783  LFSRYFGQCPVLTAQGRTHPVTNYFLEDIYEYINYNLASDAPAALRYETSAIDK--SGPV 840

Query: 1137 HNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLED 958
             NHRGKKNLVLS+WGD+S LS+  +NP+Y+ +SY+TYS++T+ NLK LNE++IDYDLLED
Sbjct: 841  DNHRGKKNLVLSAWGDDSQLSEDCINPHYISTSYQTYSEQTQKNLKRLNEEIIDYDLLED 900

Query: 957  LISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKV 778
            LI Y+DE    GAIL+FLPGV+EIYMLLD+L ASYRFG  SSDW+LPLHSS+A  DQ+KV
Sbjct: 901  LICYVDETCGEGAILIFLPGVSEIYMLLDRLVASYRFGGPSSDWVLPLHSSIASKDQKKV 960

Query: 777  FMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANA 598
            F+ PP+NIRKVI+AT+IAETS+TIDDVVYVIDCGKHKENRYNPQKK++SMVEDWISQANA
Sbjct: 961  FLWPPDNIRKVIIATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLTSMVEDWISQANA 1020

Query: 597  RQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFL 418
            RQR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVEL LQIK LSLG I  FL
Sbjct: 1021 RQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELSLQIKLLSLGHIKPFL 1080

Query: 417  LKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCL 238
             KA+EPPR+EA+TSAIS LYEVGA+EG+E+LTPLG HLAKLPVDVLIGKM+LYG IFGCL
Sbjct: 1081 SKALEPPREEAMTSAISLLYEVGALEGDEQLTPLGHHLAKLPVDVLIGKMLLYGAIFGCL 1140

Query: 237  SPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAY 58
            SPILSI+AFLSYKSPFVYPKDEKQNV+RAK +LLADK+D  N+++  +R SDHLLMMVAY
Sbjct: 1141 SPILSISAFLSYKSPFVYPKDEKQNVERAKLALLADKIDGSNDSNYNDRLSDHLLMMVAY 1200

Query: 57   NKWAKILHER 28
             KW KIL ER
Sbjct: 1201 KKWEKILSER 1210


>ref|XP_009353736.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Pyrus x bretschneideri]
          Length = 1437

 Score = 1343 bits (3477), Expect = 0.0
 Identities = 717/1205 (59%), Positives = 881/1205 (73%), Gaps = 8/1205 (0%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTS 3439
            A +LQISA+NE       LNSG     +A  P +  +S+AQK KKL+++YEKLSCEGFT+
Sbjct: 23   APRLQISADNENRVRGLLLNSGRSNAPAA--PVDESLSKAQKTKKLKAVYEKLSCEGFTN 80

Query: 3438 DQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIIST 3259
            DQIE ALSAL EGATFE A              LKFS+GTS  + EG     GS+ +I T
Sbjct: 81   DQIELALSALKEGATFENAVDWLCLNLTSNELPLKFSTGTSLHTSEG-----GSVGVILT 135

Query: 3258 ARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEEWX 3079
            +R DW PS     ++D+    ++IRTKG RDD  +D  +PSQADWI++Y++QQ+E E   
Sbjct: 136  SRDDWTPSVDTHTKIDEDAPRIAIRTKGHRDDKTLDSFQPSQADWIKRYVEQQQEDESTT 195

Query: 3078 XXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLK 2899
                                     IAKEYH ARL A +AK+  +K+ QE AG  IR LK
Sbjct: 196  WEDDADEALAEKVLKPRSYDL----IAKEYHAARLEAAKAKQNRDKQSQERAGSIIRNLK 251

Query: 2898 QEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAILDGG 2719
            QE+++LGLSDDIL         S    +     SE   +   ++   EG   +  I D  
Sbjct: 252  QELSALGLSDDILA--------SEFAKEQGSAPSEDTYDSPCKQ--SEGGFADDLIADES 301

Query: 2718 PMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTTLPP 2539
                    E  G   S   S PS +P  +   +  +EE  DV+  N F ED   +   PP
Sbjct: 302  D------TEHSGSIHSPVNSTPS-VP--VQGKIVAEEESTDVEIGNFFLEDGPSADVPPP 352

Query: 2538 EVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKVLGN 2359
            E+L++QKKERM +  + +NL K+D IW+KGD  KIPKA+LHQLCQRSGWEAPK++KV G 
Sbjct: 353  EILELQKKERMREMSSEKNLEKLDGIWKKGDSRKIPKAILHQLCQRSGWEAPKFNKVNGK 412

Query: 2358 ECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLFPDL 2179
            +   SY VSVLR A+GRGKSRKAGGL+TLQLPDQ+ TF             AL +LFPDL
Sbjct: 413  QNNLSYTVSVLRKASGRGKSRKAGGLVTLQLPDQHVTFDSTEDAQNRVAAFALCQLFPDL 472

Query: 2178 PVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADVSFHEK 1999
            PVH L++EPY+SLV++  EGE+ TN+E +E+ RRA FVDSLL  D S  T++A+V+    
Sbjct: 473  PVHLLIIEPYASLVIQWMEGESSTNVEDSEEDRRAAFVDSLLRVDGSASTSAANVTNDIA 532

Query: 1998 LVKSQDQE--------TTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKA 1843
              K+Q+            Y +++A++  R+   K+VES +L+Q+ E K+K  +++ MLK 
Sbjct: 533  PDKAQELHIEQPISAGVAYVDLAAQRVHRL---KEVESTYLRQELENKVKNPKFKDMLKT 589

Query: 1842 RASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQ 1663
            RA+LPIA LKG +L LL EN+V+VVCGETG GKTTQVPQFILDDMI S  GG C+I+CTQ
Sbjct: 590  RAALPIAGLKGDILQLLSENNVLVVCGETGSGKTTQVPQFILDDMIKSGHGGDCNIICTQ 649

Query: 1662 PRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGN 1483
            PRRIAAISVAERV++ERCE          GYQVRLDS+ N+KTKLLFCTTGILLRK  G+
Sbjct: 650  PRRIAAISVAERVSDERCEPSPGSKGSLVGYQVRLDSASNDKTKLLFCTTGILLRKFVGD 709

Query: 1482 RDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRY 1303
            ++L G+THVIVDEVHERSLLGDFLLIVL+NLIE+QS+  T  LKV+LMSATVD+ LFSRY
Sbjct: 710  KNLTGVTHVIVDEVHERSLLGDFLLIVLKNLIEKQSALNTPKLKVILMSATVDSNLFSRY 769

Query: 1302 FGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRG 1123
            FGNCPVITAEGR+HPV+TY+LED+YE + Y +ASDSP S+ Y   +KEK  +GPV+N RG
Sbjct: 770  FGNCPVITAEGRTHPVTTYYLEDIYESIDYRIASDSPASMRYGALTKEK--AGPVNNRRG 827

Query: 1122 KKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYI 943
            KKNLVLS WGD+S+LS+  +NP Y+P SY++Y ++TR NL+ +NEDVIDYDLLEDL+ ++
Sbjct: 828  KKNLVLSGWGDDSLLSEETINPYYVPDSYQSYKEQTRQNLQRVNEDVIDYDLLEDLVCHV 887

Query: 942  DEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPP 763
            DE    GAILVFLPGV+EIY L+DKL+ASYRFG  +SDW+LPLHSS+A  DQ+KVF+  P
Sbjct: 888  DETCNEGAILVFLPGVSEIYTLVDKLSASYRFGGPASDWILPLHSSVASTDQKKVFLRAP 947

Query: 762  ENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCG 583
            ENIRKVIVAT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+ANARQR G
Sbjct: 948  ENIRKVIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRANARQRRG 1007

Query: 582  RAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIE 403
            RAGRVKPGICFCLYTRYRFEKLMRP+QVPEMLRMPLVELCLQIK LSLG I SFL +A+E
Sbjct: 1008 RAGRVKPGICFCLYTRYRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGYIKSFLSEALE 1067

Query: 402  PPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILS 223
            PPR+EA+TS+I  LYEVGA+E +EELTPLG HLAKLPVDVLIGKMMLYGGIFGCLSPILS
Sbjct: 1068 PPREEAMTSSIKLLYEVGALEADEELTPLGHHLAKLPVDVLIGKMMLYGGIFGCLSPILS 1127

Query: 222  IAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAK 43
            IAAFLSYKSPF+YP+DE+QNV+RAK +LL  KLD  +E++  +RQSDHL+MM AY+KW K
Sbjct: 1128 IAAFLSYKSPFIYPRDERQNVERAKLALLTGKLDGPSESNDSDRQSDHLIMMNAYSKWEK 1187

Query: 42   ILHER 28
            IL E+
Sbjct: 1188 ILREK 1192


>ref|XP_012066649.1| PREDICTED: ATP-dependent RNA helicase DHX29 [Jatropha curcas]
            gi|643736006|gb|KDP42422.1| hypothetical protein
            JCGZ_00219 [Jatropha curcas]
          Length = 1460

 Score = 1339 bits (3465), Expect = 0.0
 Identities = 710/1200 (59%), Positives = 877/1200 (73%), Gaps = 5/1200 (0%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            +LQISAENE       LNSG     S+    ++ +S+ QKAK+L++IYEKLSCEGF++DQ
Sbjct: 31   RLQISAENENRLRRLLLNSGQSTQPSSATSVQDNLSKVQKAKRLKNIYEKLSCEGFSNDQ 90

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE AL+++ + ATFE+A              LKFSSGTS  + EG      S+S++STAR
Sbjct: 91   IELALTSIKDNATFESALDWLCLNLPGNELPLKFSSGTSLNTNEG------SVSVVSTAR 144

Query: 3252 ADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE--WX 3079
             +W PS    A+ ++ +  VS+R K   DD+   L   SQADWIRQYM+QQEE E   W 
Sbjct: 145  DNWTPSVNASAKTEEPVQPVSVRIKARWDDNDDALDSRSQADWIRQYMEQQEEDESQTWE 204

Query: 3078 XXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLK 2899
                                     IA+EY+ ARL A +AKEKG+KK QE AG  IRKLK
Sbjct: 205  DYDVDGNLVNKDPVPRSYEI-----IAEEYYAARLEATKAKEKGDKKTQEQAGHVIRKLK 259

Query: 2898 QEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAILDGG 2719
            QE+ASLGLSDD+L      +  S  +P+     + P      +   D     +  +    
Sbjct: 260  QELASLGLSDDMLAQEFDHERHSVSVPEGTSMSAMPQEQLQEKTSSDAEGGSDFLVPSDE 319

Query: 2718 PMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTTLPP 2539
              VE N VE        + S PS +P  +  D+  ++E G+V+  + F ED + +  LPP
Sbjct: 320  IPVEANDVESSSSVEFSEESIPSSVP--VQKDIVLEDEAGEVELGDFFLEDVASNEALPP 377

Query: 2538 EVLKMQKKE-RMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKVLG 2362
            +VL++QKKE R  + +N +NL K+D IW+KGDP KIPKAVLHQLCQ+SGW+APK++KVL 
Sbjct: 378  QVLELQKKEKRREELLNEKNLEKLDGIWKKGDPHKIPKAVLHQLCQKSGWDAPKFNKVLE 437

Query: 2361 NECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLFPD 2182
               GF Y+VS+LR A+GRGKSRKAGGLITLQLPD  ET+             ALY LFPD
Sbjct: 438  RREGFLYSVSILRKASGRGKSRKAGGLITLQLPDWDETYESAEDAQNRVAAFALYELFPD 497

Query: 2181 LPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADVSFHE 2002
            +P+H +V +PY+SL+++ +EGE+ + +E+  + RRA FVD LL++D S           E
Sbjct: 498  IPIHLIVTKPYASLILQWKEGESSSKVENAVEERRAGFVDRLLNSDVSIARADTTNGLSE 557

Query: 2001 KLVKSQDQETT-YANVSAEK-AERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARASLP 1828
             L  S  QE + +++  A   A R      VES +L+Q+ E K  +Q+Y+ MLK R +LP
Sbjct: 558  PLQNSHVQEASKFSDAGAHPVAGREKITSDVESSYLRQEQENKKTMQKYRDMLKTRNALP 617

Query: 1827 IAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPRRIA 1648
            IA LK  +L +L EN+ +VVCGETG GKTTQVPQFILDDMI S +GG CSI+CTQPRRIA
Sbjct: 618  IAGLKDDILQMLNENNFLVVCGETGSGKTTQVPQFILDDMIESGRGGECSIICTQPRRIA 677

Query: 1647 AISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRDLAG 1468
            AISVAERVA+ERCE          GYQVRLDS+RNEKTKLLFCTTGILLR+L G+R+LAG
Sbjct: 678  AISVAERVADERCEPSPGSNGSLVGYQVRLDSARNEKTKLLFCTTGILLRRLVGDRNLAG 737

Query: 1467 ITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFGNCP 1288
            +THVIVDEVHERSLLGDFLLI+L++LIE++S H T  LKV+LMSATVD+ LFS YFG+CP
Sbjct: 738  VTHVIVDEVHERSLLGDFLLIILKSLIEKESGHGTPKLKVILMSATVDSTLFSSYFGHCP 797

Query: 1287 VITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKKNLV 1108
            V+TA+GR+HPV+TYFLED+YE + Y L SDSP +L Y T + +K  SG V+N RGKKNLV
Sbjct: 798  VLTAQGRTHPVTTYFLEDIYESINYHLTSDSPAALKYQTPTFDK--SGSVNNRRGKKNLV 855

Query: 1107 LSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDEVYP 928
            LS+WGD+S+LS+ +VNP+Y+ S+Y+ Y ++TR NLK LNEDVIDYD+LEDLI Y+DE   
Sbjct: 856  LSAWGDDSLLSEDFVNPHYVSSNYQLYGEQTRQNLKKLNEDVIDYDVLEDLICYVDETCG 915

Query: 927  VGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPENIRK 748
             GAILVFLPGV+EI+MLLD+L+ASYRFG  SSDW+LPLHSS+AP DQ+KVF+ PPEN RK
Sbjct: 916  EGAILVFLPGVSEIHMLLDRLSASYRFGGTSSDWVLPLHSSIAPMDQKKVFLRPPENTRK 975

Query: 747  VIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRAGRV 568
            VI+AT+IAETSITIDDV+YVIDCGKHKENRYNPQKK++SMVEDWISQANARQR GRAGRV
Sbjct: 976  VIIATNIAETSITIDDVIYVIDCGKHKENRYNPQKKLTSMVEDWISQANARQRRGRAGRV 1035

Query: 567  KPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPPRKE 388
            KPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  FL KA+EPP  E
Sbjct: 1036 KPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGHIKPFLSKALEPPNDE 1095

Query: 387  AVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIAAFL 208
            A+TSAIS LYEVGA+EG+EELTPLG HLAKLPVDVLIGKMMLYG IFGCLSPILSI+AFL
Sbjct: 1096 AMTSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMMLYGAIFGCLSPILSISAFL 1155

Query: 207  SYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKILHER 28
            SYKSPFVYPKDE+QNV+RAK +LL DK D  N+++  ++QSDH++MMVAY KW KIL ER
Sbjct: 1156 SYKSPFVYPKDERQNVERAKLALLTDKSDGSNDSNDNDKQSDHIVMMVAYKKWEKILQER 1215


>ref|XP_006494370.1| PREDICTED: ATP-dependent RNA helicase DHX29-like isoform X1 [Citrus
            sinensis]
          Length = 1455

 Score = 1333 bits (3450), Expect = 0.0
 Identities = 716/1211 (59%), Positives = 878/1211 (72%), Gaps = 16/1211 (1%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            +LQISAENE       LN+  P + +A P   N +S+AQKA+KL+++YEKLSCEGF +DQ
Sbjct: 32   RLQISAENENRLRRLLLNTARPDLPAAAPAQGN-LSKAQKARKLKAVYEKLSCEGFGNDQ 90

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE ALS+L + ATFE A              LKFSSGTS  +  GA     S+ ++S AR
Sbjct: 91   IELALSSLKDDATFEDALDWLCLNLPGNELPLKFSSGTSQQTNRGA-----SVGVLSVAR 145

Query: 3252 ADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE--WX 3079
             DW PS       +++   +S+R KG +DD+ +   + SQADWIRQYM+QQEE E+  W 
Sbjct: 146  DDWTPSAVSSTSTNEETQNISVRIKGRQDDNNLGSLQRSQADWIRQYMEQQEEDEDETWE 205

Query: 3078 XXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLK 2899
                                     IA+EY  ARL A +AKEKG+KK Q  AG  I KLK
Sbjct: 206  DHATDKSSSKEVSKPRSYDV-----IAREYLMARLEATKAKEKGDKKGQAQAGSIIGKLK 260

Query: 2898 QEMASLGLSDDILVL-VSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDVPESAILDG 2722
            QE+++LGLSDDIL L     + +S    D             +  +PDE   PES    G
Sbjct: 261  QELSALGLSDDILALDFENQRASSYATKDTC-----------TSSVPDED--PESDDQHG 307

Query: 2721 GP---------MVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCE 2569
            G          ++ G   E C  K  E    P  IP +  V  + ++EP DV+    F E
Sbjct: 308  GSDFDMHTDHLIIGGKDSESCSSK--EFPLQP--IPSVEPVQEKTEDEPADVELGGFFSE 363

Query: 2568 DPSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWE 2389
            D     TL PE+L++QKKE+M +  + +N+ K+D IW+KG+P KIPKAVLHQLCQRSGW+
Sbjct: 364  DALFGDTLAPEILELQKKEKMRELCSDKNIEKLDGIWKKGEPHKIPKAVLHQLCQRSGWD 423

Query: 2388 APKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXX 2209
            APK++KV G    FSYAVSVLR A+GRGKSRKAGGLITL+LP + ETF            
Sbjct: 424  APKFNKVTGKNNNFSYAVSVLRKASGRGKSRKAGGLITLELPGEGETFESVEDAQNQVAA 483

Query: 2208 XALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPT 2029
             AL+ LFPDLP+H  V EPY+SL+++ +EGE+   +E +++ RRA FVD LL  D S  T
Sbjct: 484  FALHNLFPDLPIHLAVTEPYASLILRWKEGESSITIEDSDENRRAVFVDQLLRADTSSST 543

Query: 2028 TSADV---SFHEKLVKSQDQETTYANVSAEKAE-RMNYHKQVESRFLKQDFEGKLKLQRY 1861
               +V   SF + ++ + ++       +A+  + R+ Y ++VES  LKQ+ E K K+Q+Y
Sbjct: 544  AFINVPSSSFSDSVLTNVEENDNLRIAAADPNDGRVKYIREVESSRLKQEQENKKKMQKY 603

Query: 1860 QKMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYC 1681
            + M K RA+LPIA LK  +L LLKE DV+VVCGETG GKTTQVPQFILDDMI S  GG+C
Sbjct: 604  KDMSKTRAALPIATLKSDILQLLKEKDVLVVCGETGSGKTTQVPQFILDDMIESGHGGHC 663

Query: 1680 SIVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILL 1501
            +I+CTQPRRIAAISVAERVA+ERCE          GYQVRLDS+RNE+TKLLFCTTGILL
Sbjct: 664  NIICTQPRRIAAISVAERVADERCEPSPGSDGSLVGYQVRLDSARNERTKLLFCTTGILL 723

Query: 1500 RKLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDA 1321
            RK+AG+++L G+THVIVDEVHERSLLGDFLLIVL++L+E+QS+H T  LKV+LMSATVD+
Sbjct: 724  RKIAGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDS 783

Query: 1320 GLFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGP 1141
             LFSRYFG+CPVITAEGR+HPV+TYFLEDVYE + Y LASDS  ++ Y  SSK    SGP
Sbjct: 784  NLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLASDSAAAIRYEASSK----SGP 839

Query: 1140 VHNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLE 961
            V+N RGKKNLVLS WGD+S+LS+ Y+NP Y PS Y +YS++TR NLK LNEDVIDYDLLE
Sbjct: 840  VNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLE 899

Query: 960  DLISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRK 781
            DL+ ++DE    GAILVFLPGVAEI++LLD+LAASYRFG  SSDWLL LHSS+A  DQ+K
Sbjct: 900  DLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKK 959

Query: 780  VFMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQAN 601
            VF+ PPE IRKVI+AT+IAETSITIDDVVYV DCG+HKENRYNPQKK+SSMVEDWISQAN
Sbjct: 960  VFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNPQKKLSSMVEDWISQAN 1019

Query: 600  ARQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSF 421
            ARQR GRAGRVKPGIC+ LYTR+R+EKLMRPYQVPEM RMPLVELCLQIK LSLG I  F
Sbjct: 1020 ARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIF 1079

Query: 420  LLKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGC 241
            L KA+EPP++EA+T+AIS LYEVGAIEG+EELTPLG HLAKLPVDVLIGKMML+GGIFGC
Sbjct: 1080 LSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGC 1139

Query: 240  LSPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVA 61
            LSPILSI+AFLSYKSPF+YPKDEKQNV+RAK +LL DKL+  ++++  + QSDHL++MVA
Sbjct: 1140 LSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVA 1199

Query: 60   YNKWAKILHER 28
            Y KW KIL +R
Sbjct: 1200 YKKWQKILLKR 1210


>ref|XP_004300262.1| PREDICTED: ATP-dependent RNA helicase DHX36 [Fragaria vesca subsp.
            vesca]
          Length = 1456

 Score = 1333 bits (3450), Expect = 0.0
 Identities = 701/1200 (58%), Positives = 871/1200 (72%), Gaps = 5/1200 (0%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            +LQISAENE       LNSG     SA  P +  +S+AQKAKKL+++YE+LSCEGFT+DQ
Sbjct: 45   RLQISAENENRLRRLLLNSGR----SAAVPVDESLSKAQKAKKLKAVYEQLSCEGFTNDQ 100

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IE ALSA+ EGAT+EAA              LKFSSG S  + EG     GS+ ++ T+R
Sbjct: 101  IELALSAVKEGATYEAALDWLCLNVPGDELPLKFSSGVSMAANEG-----GSVGVVLTSR 155

Query: 3252 ADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEE--WX 3079
             DW PS    A++D+   G++IRTKG  DD  +D  +PSQADWI++Y++QQEE E   W 
Sbjct: 156  DDWTPSVDTSAKIDEDTPGIAIRTKGQWDDKTLDSCQPSQADWIKRYVEQQEEDESSTWE 215

Query: 3078 XXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKLK 2899
                                     IAKEYH ARL A EAK+K +KK+QE AG  IR LK
Sbjct: 216  DDVDDEVSGAKVRKPRSYDV-----IAKEYHAARLEAAEAKQKKDKKNQERAGKVIRDLK 270

Query: 2898 QEMASLGLSDDILVL-VSGDKCTSNCLPDLMQRD--SEPLLNPDSRELPDEGDVPESAIL 2728
            QE+++LGLSDDIL      ++            D  SEP    D     +          
Sbjct: 271  QELSALGLSDDILASEFEQEQSIERAYSAFEDTDTSSEPYKQADGLHADE---------- 320

Query: 2727 DGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTT 2548
                  +GN +E C        S PS +P  +   +  +EE  D++  N F ED   +  
Sbjct: 321  ---LKADGNDMEPCSSVQLPINSTPSDLP--VQEKIAAEEETTDMEIGNFFLEDAPSNDF 375

Query: 2547 LPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKV 2368
            L P +L++QKKE++ + ++ +NL K+D IW+KG+P KIPKAV HQLCQ+SGWEAPK++KV
Sbjct: 376  LTPTILELQKKEKLREMLSEKNLEKLDGIWKKGEPQKIPKAVFHQLCQKSGWEAPKFNKV 435

Query: 2367 LGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLF 2188
             G +  FSY +SVLR A+GRGKSRKAGGL+TLQLPD   TF             AL +LF
Sbjct: 436  RGKDNSFSYTISVLRKASGRGKSRKAGGLVTLQLPDHDVTFDSAEDAQNRVAAYALCQLF 495

Query: 2187 PDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADVSF 2008
             DLP+H ++ EPY+SL+++ +EGET+TN+E     RRA+FVDSLL  D S  T++A+V +
Sbjct: 496  NDLPIHLVITEPYASLIIQWKEGETMTNVEDGVKDRRANFVDSLLKADGSSSTSTANVVY 555

Query: 2007 HEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARASLP 1828
                  S  +      V   +   +N  K  ES +L+Q+ E K K Q++++MLKARA+LP
Sbjct: 556  DS---DSLPKVVPRLQVQEPRNSELNPRKDAESSYLRQELENKQKTQKFKEMLKARAALP 612

Query: 1827 IAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPRRIA 1648
            IA LKG +L LL++N+V+VVCGETG GKTTQVPQFILDDMI S +GG+C+I+CTQPRRIA
Sbjct: 613  IAGLKGDILQLLQDNNVLVVCGETGSGKTTQVPQFILDDMIQSGRGGHCNIICTQPRRIA 672

Query: 1647 AISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRDLAG 1468
            AISVA+RV +ERCE          GYQVRLD++ NEKTKLLFCTTGILLRK  G+R+L G
Sbjct: 673  AISVADRVTDERCEPSPGSNGSLVGYQVRLDNASNEKTKLLFCTTGILLRKFVGDRNLTG 732

Query: 1467 ITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFGNCP 1288
            +THVIVDEVHERSLLGDFLLIVL+NLIE+QS+  T  LKV+LMSATVD+ LFS YFG CP
Sbjct: 733  VTHVIVDEVHERSLLGDFLLIVLKNLIEKQSALNTPKLKVILMSATVDSNLFSNYFGGCP 792

Query: 1287 VITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKKNLV 1108
            VITAEGR+HPV+TY+LED+YE + Y LASDSP S+ Y TS++ K  +GPV+N RGKKNLV
Sbjct: 793  VITAEGRTHPVTTYYLEDIYERIDYRLASDSPASMVYGTSTEGK--TGPVNNSRGKKNLV 850

Query: 1107 LSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDEVYP 928
            LS WGD+S+LS+ +VNPNY+   Y++Y ++TR NLK LNEDVIDYDLLEDL+ ++DE   
Sbjct: 851  LSGWGDDSVLSEEFVNPNYVHDMYQSYREQTRQNLKRLNEDVIDYDLLEDLVCHVDETCA 910

Query: 927  VGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPENIRK 748
             GA+LVFLPGV+EIY L+DKLAASYRFG  +SDW+LPLHSS+A  DQ+KVF+  P+NIRK
Sbjct: 911  EGAVLVFLPGVSEIYTLVDKLAASYRFGGAASDWILPLHSSVASVDQKKVFLQAPDNIRK 970

Query: 747  VIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRAGRV 568
            +IVAT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+ANARQR GRAGRV
Sbjct: 971  IIVATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISKANARQRRGRAGRV 1030

Query: 567  KPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPPRKE 388
            KPGICFC+YT YRFEKLMRP+QVPEMLRMPLVELCLQIK LSLG I  FL +A+EPPR+E
Sbjct: 1031 KPGICFCMYTSYRFEKLMRPFQVPEMLRMPLVELCLQIKLLSLGHIKPFLSQALEPPREE 1090

Query: 387  AVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIAAFL 208
            A+TSAI  LYEVGA+E +EELTPLG HLAKLPVDVLIGKMM++GGIFGCLSPILSI+AFL
Sbjct: 1091 AMTSAIKILYEVGALETDEELTPLGHHLAKLPVDVLIGKMMIHGGIFGCLSPILSISAFL 1150

Query: 207  SYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKILHER 28
            SYKSPFV+PKDEK+N  RAK +LL DKLD  +E++  ++QSDHL+M+ AY KW KIL ++
Sbjct: 1151 SYKSPFVHPKDEKENAKRAKLALLTDKLDGPSESNNVDKQSDHLIMITAYKKWEKILRDK 1210


>ref|XP_006349342.1| PREDICTED: ATP-dependent RNA helicase Dhx29-like [Solanum tuberosum]
          Length = 1438

 Score = 1326 bits (3432), Expect = 0.0
 Identities = 712/1199 (59%), Positives = 877/1199 (73%), Gaps = 5/1199 (0%)
 Frame = -2

Query: 3612 KLQISAENEXXXXXXXLNSGTPPVTSAGPPPENPISRAQKAKKLRSIYEKLSCEGFTSDQ 3433
            KLQISAENE       LNSG    +    P E+ +S+AQKAKKL SIYEKLSCEGFT+DQ
Sbjct: 21   KLQISAENENRLRRLLLNSGRSTQSPTPIPAEDALSKAQKAKKLSSIYEKLSCEGFTNDQ 80

Query: 3432 IERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEGSISIISTAR 3253
            IERALSAL E ATFEAA              LKFSSGTS ++       EGS+ IISTAR
Sbjct: 81   IERALSALKERATFEAALDWLCLNLRGNELPLKFSSGTSQLN-------EGSVGIISTAR 133

Query: 3252 ADWAPSQPPP-AEV-DDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQEEQEEWX 3079
             DW PS     AEV D++I  VS+  KG  D + +   + +QADWIRQYM+QQEE E   
Sbjct: 134  QDWVPSADSSVAEVKDEKIPKVSVVPKGRSDSESLRTVERAQADWIRQYMEQQEEDEA-- 191

Query: 3078 XXXXXXXXXXXXXXXXXXXXSRAV-SIAKEYHDARLAAVEAKEKGNKKDQELAGLRIRKL 2902
                                 R+V SI +E+H ARL A+ AKE+G+KK QE A   IRK+
Sbjct: 192  -ESLESDFFDDGSLEQVPRKKRSVESIVQEFHTARLEAIHAKERGDKKGQEQASRTIRKI 250

Query: 2901 KQEMASLGLSDDILVLVSGDKCTSNCLPDLMQR--DSEPLLNPDSRELPDEGDVPESAIL 2728
            KQE++SLGL DDIL     +  + + + D+     D + + + + R      D+ E  I 
Sbjct: 251  KQEISSLGLPDDILESAH-ESASDHAVLDMSSEKLDVDDVTSHNFRT----SDIHEHEI- 304

Query: 2727 DGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCEDPSVSTT 2548
                 ++   V     +  ED  +PS +P  LG       EP DV+  +   E+ S +  
Sbjct: 305  ----GMDEVSVNNSSNEFIED--NPSSVP--LGDKAASGGEPEDVELGDFLFEEDSSADV 356

Query: 2547 LPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEAPKYSKV 2368
            L   VL++QKKE+M +  + +NL K++ IW+KGDP KIPKA LHQLCQRSGWEAPKY+K+
Sbjct: 357  LAT-VLELQKKEKMRELCSQKNLEKLEGIWKKGDPQKIPKAFLHQLCQRSGWEAPKYAKI 415

Query: 2367 LGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXXALYRLF 2188
             G     SY+VS++R A+GRGKSRKAGGL+T++LP Q                 AL+RLF
Sbjct: 416  PGKGNITSYSVSIMRKASGRGKSRKAGGLVTIELPSQDHASSTAEDAQNRVAAYALHRLF 475

Query: 2187 PDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNSGPTTSADVSF 2008
            PDLPVH  + EPY+SL+++ +EG+++ ++   +  RRA FVDSLL    S   T +DVS 
Sbjct: 476  PDLPVHMPITEPYASLILQWEEGDSVKDIVDDQVERRAYFVDSLLEASGSETITHSDVSN 535

Query: 2007 HEKLVKSQDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRYQKMLKARASLP 1828
            +    K     TT            N  K+ ES  LK++ EG+ KL++YQ+MLK+RA+LP
Sbjct: 536  NASKEKFLHPHTTEDKTVPVDFTAKNPRKEAESFSLKKEQEGRKKLKKYQEMLKSRAALP 595

Query: 1827 IAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYCSIVCTQPRRIA 1648
            IA LKG +LH L+ENDV+V+CGETGCGKTTQVPQFILDDMI S +GG+C+I+CTQPRRIA
Sbjct: 596  IADLKGEILHSLEENDVLVICGETGCGKTTQVPQFILDDMIESGRGGHCNIICTQPRRIA 655

Query: 1647 AISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILLRKLAGNRDLAG 1468
            A SVAERVA+ERCE          GYQVRLDS+RNE+TKLLFCTTGILLR  +GN+ LAG
Sbjct: 656  ATSVAERVADERCESSPGSSESLVGYQVRLDSARNERTKLLFCTTGILLRMFSGNKSLAG 715

Query: 1467 ITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDAGLFSRYFGNCP 1288
            ++H+IVDEVHERSLLGDFLLIVL++LI++QS+  TA LKV+LMSATVD+ LFS YFG+CP
Sbjct: 716  VSHIIVDEVHERSLLGDFLLIVLKSLIQKQSALGTAKLKVILMSATVDSHLFSHYFGHCP 775

Query: 1287 VITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGPVHNHRGKKNLV 1108
            VITA+GR+HPVSTYFLED+YE + Y LASDSP S++Y TS++EK  + P+ NHRGKKNLV
Sbjct: 776  VITAQGRTHPVSTYFLEDIYESINYRLASDSPASVSYGTSTREK--NAPIGNHRGKKNLV 833

Query: 1107 LSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLEDLISYIDEVYP 928
            LS+WGDES+L++ Y+NP Y PS+Y+ YS +T+ NL+ LNED+IDYDLLEDL+ YIDE YP
Sbjct: 834  LSAWGDESLLAEEYINPYYDPSNYQNYSGQTQKNLRKLNEDIIDYDLLEDLVCYIDETYP 893

Query: 927  VGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRKVFMSPPENIRK 748
             GAILVFLPGVAEI  LLD+L+ S++F   SS+W+LPLHSS+A  DQ+KVF+ PPENIRK
Sbjct: 894  EGAILVFLPGVAEINTLLDRLSVSFQFSGQSSEWILPLHSSVASEDQKKVFIRPPENIRK 953

Query: 747  VIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQANARQRCGRAGRV 568
            VI+AT+IAETSITIDDVVYV+DCGKHKENRYNP+KK+SSMVEDWISQANARQR GRAGRV
Sbjct: 954  VIIATNIAETSITIDDVVYVVDCGKHKENRYNPKKKLSSMVEDWISQANARQRRGRAGRV 1013

Query: 567  KPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSFLLKAIEPPRKE 388
            KPGICFCLYT YR+EKLMRPYQ+PEMLRMPLVELCLQIK LSLG I  FL  A+EPP+ E
Sbjct: 1014 KPGICFCLYTSYRYEKLMRPYQIPEMLRMPLVELCLQIKLLSLGSIKLFLSMALEPPKDE 1073

Query: 387  AVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGCLSPILSIAAFL 208
            A+ SAIS LYEVGA+EG+EELTPLG+HLA+LPVDVL+GKM+LYGG+FGCLSPILSI+AFL
Sbjct: 1074 AIMSAISLLYEVGAVEGDEELTPLGYHLARLPVDVLVGKMLLYGGVFGCLSPILSISAFL 1133

Query: 207  SYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVAYNKWAKILHE 31
            SYKSPFVYPKDE+QNV+RAK +LL+DKL  E ++D GN QSDHLLMMVAY KW KIL E
Sbjct: 1134 SYKSPFVYPKDERQNVERAKLALLSDKLGCETDSDSGNWQSDHLLMMVAYKKWEKILRE 1192


>ref|XP_012467825.1| PREDICTED: ATP-dependent RNA helicase DHX29 isoform X2 [Gossypium
            raimondii]
          Length = 1258

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 711/1211 (58%), Positives = 881/1211 (72%), Gaps = 14/1211 (1%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGP-------PPENPISRAQKAKKLRSIYEKL 3460
            A +LQISAENE       LNSG    + +         PP++ +S+AQKAKKL+++YEKL
Sbjct: 32   APRLQISAENENRLRRLLLNSGHSTQSQSQSQSESDLNPPQDSLSKAQKAKKLKALYEKL 91

Query: 3459 SCEGFTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEG 3280
            SCEGF++DQIE ALS+L +GATFE A              LKFSSG S  S  G     G
Sbjct: 92   SCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGG-----G 146

Query: 3279 SISIISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQ 3100
            SIS+IS  R DW PS      + + + G+S+RTK S D++ +++ +PSQADWIRQYM+QQ
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 3099 EEQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQEL 2926
            EE E   W                          IAKEYH ARL A +AKEK +K  QE 
Sbjct: 207  EEDESKTWEDEASDEGSAEEVSGPRPYDV-----IAKEYHAARLEATKAKEKKDKNGQEK 261

Query: 2925 AGLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDV 2746
            AG RIRKLKQE+++LGLSD +L      +  S  + +     S P   P+   L D    
Sbjct: 262  AGSRIRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECN 321

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCED 2566
              + ++  G +  G++ +    K     S PS +P     D +   E  D++  + F ED
Sbjct: 322  SAACVITSG-VATGSVNDTETSKELSTKSIPSLLPTQEKGDAENMSE--DLEIGDFFLED 378

Query: 2565 PSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEA 2386
             S++  L  EVLK++K+E+M +  + +NL K+D IW+KG+  KIPKAVLHQLCQRSGWEA
Sbjct: 379  SSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSGWEA 438

Query: 2385 PKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXX 2206
            PK+ K+      F+Y+VSVLR A+GRGKSRKAGGLITLQLP++ E F             
Sbjct: 439  PKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRVAAF 498

Query: 2205 ALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS---G 2035
            AL +LFPDLP   +V EPYSSL+ + + GE+LT +E  E+ RRA FVD LL  ++S    
Sbjct: 499  ALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSRSKA 558

Query: 2034 PTTSADVSFHEKLVKS--QDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRY 1861
            P    + S   +  K+  +D +T+ ++V+    ER ++ K++ES +L+Q+ E +   QRY
Sbjct: 559  PGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHTQRY 618

Query: 1860 QKMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYC 1681
            ++MLK RA+LP+A LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S  GG+C
Sbjct: 619  KEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHGGHC 678

Query: 1680 SIVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILL 1501
            SI+CTQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILL
Sbjct: 679  SIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTGILL 738

Query: 1500 RKLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDA 1321
            RKLAG+++L G+TH+IVDEVHERSLLGDFLLIVL+NLIE+QS   T  LKV+LMSATVD+
Sbjct: 739  RKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSATVDS 798

Query: 1320 GLFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGP 1141
             LFSRYFG CPVITA+GR+HPV+T FLED+YE + Y LASDSP SL   TS+++    GP
Sbjct: 799  DLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDM--RGP 856

Query: 1140 VHNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLE 961
            V+NHRGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE
Sbjct: 857  VNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLLE 916

Query: 960  DLISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRK 781
            DL+ ++DE    GAIL+FLPGV EI+ LLD+LAASYRF   SSDWLLPLHSS+A  +Q+K
Sbjct: 917  DLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQKK 976

Query: 780  VFMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQAN 601
            VF++PP+ IRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+AN
Sbjct: 977  VFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRAN 1036

Query: 600  ARQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSF 421
            A+QR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  F
Sbjct: 1037 AKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKPF 1096

Query: 420  LLKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGC 241
            L KA+EPP++EA+ SAIS LYEVGA+EG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGC
Sbjct: 1097 LSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGC 1156

Query: 240  LSPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVA 61
            LSPILSI+A LSYKSPF+YPKDEKQNV+RAK +LL++KLD  ++ +   RQSDHLLMM A
Sbjct: 1157 LSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMAA 1216

Query: 60   YNKWAKILHER 28
            Y KW KI  E+
Sbjct: 1217 YRKWEKIFREK 1227


>ref|XP_012467824.1| PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Gossypium
            raimondii] gi|763748726|gb|KJB16165.1| hypothetical
            protein B456_002G216000 [Gossypium raimondii]
          Length = 1470

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 711/1211 (58%), Positives = 881/1211 (72%), Gaps = 14/1211 (1%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGP-------PPENPISRAQKAKKLRSIYEKL 3460
            A +LQISAENE       LNSG    + +         PP++ +S+AQKAKKL+++YEKL
Sbjct: 32   APRLQISAENENRLRRLLLNSGHSTQSQSQSQSESDLNPPQDSLSKAQKAKKLKALYEKL 91

Query: 3459 SCEGFTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEG 3280
            SCEGF++DQIE ALS+L +GATFE A              LKFSSG S  S  G     G
Sbjct: 92   SCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGG-----G 146

Query: 3279 SISIISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQ 3100
            SIS+IS  R DW PS      + + + G+S+RTK S D++ +++ +PSQADWIRQYM+QQ
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 3099 EEQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQEL 2926
            EE E   W                          IAKEYH ARL A +AKEK +K  QE 
Sbjct: 207  EEDESKTWEDEASDEGSAEEVSGPRPYDV-----IAKEYHAARLEATKAKEKKDKNGQEK 261

Query: 2925 AGLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDV 2746
            AG RIRKLKQE+++LGLSD +L      +  S  + +     S P   P+   L D    
Sbjct: 262  AGSRIRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECN 321

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCED 2566
              + ++  G +  G++ +    K     S PS +P     D +   E  D++  + F ED
Sbjct: 322  SAACVITSG-VATGSVNDTETSKELSTKSIPSLLPTQEKGDAENMSE--DLEIGDFFLED 378

Query: 2565 PSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEA 2386
             S++  L  EVLK++K+E+M +  + +NL K+D IW+KG+  KIPKAVLHQLCQRSGWEA
Sbjct: 379  SSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSGWEA 438

Query: 2385 PKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXX 2206
            PK+ K+      F+Y+VSVLR A+GRGKSRKAGGLITLQLP++ E F             
Sbjct: 439  PKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRVAAF 498

Query: 2205 ALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS---G 2035
            AL +LFPDLP   +V EPYSSL+ + + GE+LT +E  E+ RRA FVD LL  ++S    
Sbjct: 499  ALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSRSKA 558

Query: 2034 PTTSADVSFHEKLVKS--QDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRY 1861
            P    + S   +  K+  +D +T+ ++V+    ER ++ K++ES +L+Q+ E +   QRY
Sbjct: 559  PGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHTQRY 618

Query: 1860 QKMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYC 1681
            ++MLK RA+LP+A LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S  GG+C
Sbjct: 619  KEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHGGHC 678

Query: 1680 SIVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILL 1501
            SI+CTQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILL
Sbjct: 679  SIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTGILL 738

Query: 1500 RKLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDA 1321
            RKLAG+++L G+TH+IVDEVHERSLLGDFLLIVL+NLIE+QS   T  LKV+LMSATVD+
Sbjct: 739  RKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSATVDS 798

Query: 1320 GLFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGP 1141
             LFSRYFG CPVITA+GR+HPV+T FLED+YE + Y LASDSP SL   TS+++    GP
Sbjct: 799  DLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDM--RGP 856

Query: 1140 VHNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLE 961
            V+NHRGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE
Sbjct: 857  VNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLLE 916

Query: 960  DLISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRK 781
            DL+ ++DE    GAIL+FLPGV EI+ LLD+LAASYRF   SSDWLLPLHSS+A  +Q+K
Sbjct: 917  DLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQKK 976

Query: 780  VFMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQAN 601
            VF++PP+ IRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+AN
Sbjct: 977  VFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRAN 1036

Query: 600  ARQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSF 421
            A+QR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  F
Sbjct: 1037 AKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKPF 1096

Query: 420  LLKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGC 241
            L KA+EPP++EA+ SAIS LYEVGA+EG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGC
Sbjct: 1097 LSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGC 1156

Query: 240  LSPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVA 61
            LSPILSI+A LSYKSPF+YPKDEKQNV+RAK +LL++KLD  ++ +   RQSDHLLMM A
Sbjct: 1157 LSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMAA 1216

Query: 60   YNKWAKILHER 28
            Y KW KI  E+
Sbjct: 1217 YRKWEKIFREK 1227


>gb|KJB16163.1| hypothetical protein B456_002G216000 [Gossypium raimondii]
          Length = 1459

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 711/1211 (58%), Positives = 881/1211 (72%), Gaps = 14/1211 (1%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGP-------PPENPISRAQKAKKLRSIYEKL 3460
            A +LQISAENE       LNSG    + +         PP++ +S+AQKAKKL+++YEKL
Sbjct: 32   APRLQISAENENRLRRLLLNSGHSTQSQSQSQSESDLNPPQDSLSKAQKAKKLKALYEKL 91

Query: 3459 SCEGFTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEG 3280
            SCEGF++DQIE ALS+L +GATFE A              LKFSSG S  S  G     G
Sbjct: 92   SCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGG-----G 146

Query: 3279 SISIISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQ 3100
            SIS+IS  R DW PS      + + + G+S+RTK S D++ +++ +PSQADWIRQYM+QQ
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 3099 EEQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQEL 2926
            EE E   W                          IAKEYH ARL A +AKEK +K  QE 
Sbjct: 207  EEDESKTWEDEASDEGSAEEVSGPRPYDV-----IAKEYHAARLEATKAKEKKDKNGQEK 261

Query: 2925 AGLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDV 2746
            AG RIRKLKQE+++LGLSD +L      +  S  + +     S P   P+   L D    
Sbjct: 262  AGSRIRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECN 321

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCED 2566
              + ++  G +  G++ +    K     S PS +P     D +   E  D++  + F ED
Sbjct: 322  SAACVITSG-VATGSVNDTETSKELSTKSIPSLLPTQEKGDAENMSE--DLEIGDFFLED 378

Query: 2565 PSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEA 2386
             S++  L  EVLK++K+E+M +  + +NL K+D IW+KG+  KIPKAVLHQLCQRSGWEA
Sbjct: 379  SSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSGWEA 438

Query: 2385 PKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXX 2206
            PK+ K+      F+Y+VSVLR A+GRGKSRKAGGLITLQLP++ E F             
Sbjct: 439  PKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRVAAF 498

Query: 2205 ALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS---G 2035
            AL +LFPDLP   +V EPYSSL+ + + GE+LT +E  E+ RRA FVD LL  ++S    
Sbjct: 499  ALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSRSKA 558

Query: 2034 PTTSADVSFHEKLVKS--QDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRY 1861
            P    + S   +  K+  +D +T+ ++V+    ER ++ K++ES +L+Q+ E +   QRY
Sbjct: 559  PGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHTQRY 618

Query: 1860 QKMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYC 1681
            ++MLK RA+LP+A LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S  GG+C
Sbjct: 619  KEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHGGHC 678

Query: 1680 SIVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILL 1501
            SI+CTQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILL
Sbjct: 679  SIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTGILL 738

Query: 1500 RKLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDA 1321
            RKLAG+++L G+TH+IVDEVHERSLLGDFLLIVL+NLIE+QS   T  LKV+LMSATVD+
Sbjct: 739  RKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSATVDS 798

Query: 1320 GLFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGP 1141
             LFSRYFG CPVITA+GR+HPV+T FLED+YE + Y LASDSP SL   TS+++    GP
Sbjct: 799  DLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDM--RGP 856

Query: 1140 VHNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLE 961
            V+NHRGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE
Sbjct: 857  VNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLLE 916

Query: 960  DLISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRK 781
            DL+ ++DE    GAIL+FLPGV EI+ LLD+LAASYRF   SSDWLLPLHSS+A  +Q+K
Sbjct: 917  DLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQKK 976

Query: 780  VFMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQAN 601
            VF++PP+ IRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+AN
Sbjct: 977  VFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRAN 1036

Query: 600  ARQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSF 421
            A+QR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  F
Sbjct: 1037 AKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKPF 1096

Query: 420  LLKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGC 241
            L KA+EPP++EA+ SAIS LYEVGA+EG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGC
Sbjct: 1097 LSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGC 1156

Query: 240  LSPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVA 61
            LSPILSI+A LSYKSPF+YPKDEKQNV+RAK +LL++KLD  ++ +   RQSDHLLMM A
Sbjct: 1157 LSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMAA 1216

Query: 60   YNKWAKILHER 28
            Y KW KI  E+
Sbjct: 1217 YRKWEKIFREK 1227


>gb|KJB16162.1| hypothetical protein B456_002G216000 [Gossypium raimondii]
          Length = 1423

 Score = 1326 bits (3431), Expect = 0.0
 Identities = 711/1211 (58%), Positives = 881/1211 (72%), Gaps = 14/1211 (1%)
 Frame = -2

Query: 3618 ATKLQISAENEXXXXXXXLNSGTPPVTSAGP-------PPENPISRAQKAKKLRSIYEKL 3460
            A +LQISAENE       LNSG    + +         PP++ +S+AQKAKKL+++YEKL
Sbjct: 32   APRLQISAENENRLRRLLLNSGHSTQSQSQSQSESDLNPPQDSLSKAQKAKKLKALYEKL 91

Query: 3459 SCEGFTSDQIERALSALNEGATFEAAXXXXXXXXXXXXXXLKFSSGTSTVSREGAEGAEG 3280
            SCEGF++DQIE ALS+L +GATFE A              LKFSSG S  S  G     G
Sbjct: 92   SCEGFSNDQIELALSSLKDGATFETALDWLCLNLPRNELPLKFSSGISLHSDGG-----G 146

Query: 3279 SISIISTARADWAPSQPPPAEVDDQILGVSIRTKGSRDDDVMDLGKPSQADWIRQYMKQQ 3100
            SIS+IS  R DW PS      + + + G+S+RTK S D++ +++ +PSQADWIRQYM+QQ
Sbjct: 147  SISVISVEREDWTPSVDASTRIKENLHGLSVRTKSSEDENSLNMCQPSQADWIRQYMEQQ 206

Query: 3099 EEQEE--WXXXXXXXXXXXXXXXXXXXXXSRAVSIAKEYHDARLAAVEAKEKGNKKDQEL 2926
            EE E   W                          IAKEYH ARL A +AKEK +K  QE 
Sbjct: 207  EEDESKTWEDEASDEGSAEEVSGPRPYDV-----IAKEYHAARLEATKAKEKKDKNGQEK 261

Query: 2925 AGLRIRKLKQEMASLGLSDDILVLVSGDKCTSNCLPDLMQRDSEPLLNPDSRELPDEGDV 2746
            AG RIRKLKQE+++LGLSD +L      +  S  + +     S P   P+   L D    
Sbjct: 262  AGSRIRKLKQELSALGLSDAVLASDFLHERASASVSEGTVTSSMPEEQPEMISLGDAECN 321

Query: 2745 PESAILDGGPMVEGNMVEQCGLKLSEDVSDPSGIPDLLGVDVQEQEEPGDVDFSNLFCED 2566
              + ++  G +  G++ +    K     S PS +P     D +   E  D++  + F ED
Sbjct: 322  SAACVITSG-VATGSVNDTETSKELSTKSIPSLLPTQEKGDAENMSE--DLEIGDFFLED 378

Query: 2565 PSVSTTLPPEVLKMQKKERMVQSVNGQNLAKIDDIWRKGDPGKIPKAVLHQLCQRSGWEA 2386
             S++  L  EVLK++K+E+M +  + +NL K+D IW+KG+  KIPKAVLHQLCQRSGWEA
Sbjct: 379  SSINDVLASEVLKLRKQEKMKELYSEKNLEKLDGIWKKGESKKIPKAVLHQLCQRSGWEA 438

Query: 2385 PKYSKVLGNECGFSYAVSVLRTATGRGKSRKAGGLITLQLPDQYETFXXXXXXXXXXXXX 2206
            PK+ K+      F+Y+VSVLR A+GRGKSRKAGGLITLQLP++ E F             
Sbjct: 439  PKFDKMPAKGKSFAYSVSVLRKASGRGKSRKAGGLITLQLPNEQEAFESAEDSQNRVAAF 498

Query: 2205 ALYRLFPDLPVHQLVLEPYSSLVMKCQEGETLTNLEHTEDIRRADFVDSLLSTDNS---G 2035
            AL +LFPDLP   +V EPYSSL+ + + GE+LT +E  E+ RRA FVD LL  ++S    
Sbjct: 499  ALCQLFPDLPTQLIVTEPYSSLIFQWKGGESLTKIEDNEEDRRAGFVDRLLRDEDSRSKA 558

Query: 2034 PTTSADVSFHEKLVKS--QDQETTYANVSAEKAERMNYHKQVESRFLKQDFEGKLKLQRY 1861
            P    + S   +  K+  +D +T+ ++V+    ER ++ K++ES +L+Q+ E +   QRY
Sbjct: 559  PGHDTNESALNEFQKACLEDNKTSSSSVADPVYERKSHAKEMESVYLRQEEEKRKHTQRY 618

Query: 1860 QKMLKARASLPIAQLKGHLLHLLKENDVVVVCGETGCGKTTQVPQFILDDMIASSQGGYC 1681
            ++MLK RA+LP+A LK  +L LLKEN+V+VVCGETG GKTTQVPQFILDDMI S  GG+C
Sbjct: 619  KEMLKTRAALPVAGLKNDILQLLKENNVLVVCGETGSGKTTQVPQFILDDMIESGHGGHC 678

Query: 1680 SIVCTQPRRIAAISVAERVAEERCEXXXXXXXXXXGYQVRLDSSRNEKTKLLFCTTGILL 1501
            SI+CTQPRRIAAISVAERVA+ERCE          GYQVRLD++RNEKTKLLFCTTGILL
Sbjct: 679  SIICTQPRRIAAISVAERVADERCEPSPGSNWSLVGYQVRLDNARNEKTKLLFCTTGILL 738

Query: 1500 RKLAGNRDLAGITHVIVDEVHERSLLGDFLLIVLRNLIEQQSSHKTANLKVVLMSATVDA 1321
            RKLAG+++L G+TH+IVDEVHERSLLGDFLLIVL+NLIE+QS   T  LKV+LMSATVD+
Sbjct: 739  RKLAGDKNLTGVTHIIVDEVHERSLLGDFLLIVLKNLIEKQSVSNTPKLKVILMSATVDS 798

Query: 1320 GLFSRYFGNCPVITAEGRSHPVSTYFLEDVYEDLKYSLASDSPVSLTYLTSSKEKIRSGP 1141
             LFSRYFG CPVITA+GR+HPV+T FLED+YE + Y LASDSP SL   TS+++    GP
Sbjct: 799  DLFSRYFGLCPVITAQGRTHPVTTCFLEDIYERINYHLASDSPASLRCETSTRDM--RGP 856

Query: 1140 VHNHRGKKNLVLSSWGDESILSQSYVNPNYLPSSYETYSDRTRNNLKILNEDVIDYDLLE 961
            V+NHRGKKNLVLS+WGD+S+LS+ YVNP+Y  SSY++YS++T+ NLK LNEDVIDYDLLE
Sbjct: 857  VNNHRGKKNLVLSAWGDDSLLSEEYVNPHYDSSSYQSYSEQTQQNLKRLNEDVIDYDLLE 916

Query: 960  DLISYIDEVYPVGAILVFLPGVAEIYMLLDKLAASYRFGSLSSDWLLPLHSSLAPADQRK 781
            DL+ ++DE    GAIL+FLPGV EI+ LLD+LAASYRF   SSDWLLPLHSS+A  +Q+K
Sbjct: 917  DLVCHVDETCDKGAILIFLPGVVEIHTLLDRLAASYRFAGPSSDWLLPLHSSIAADEQKK 976

Query: 780  VFMSPPENIRKVIVATDIAETSITIDDVVYVIDCGKHKENRYNPQKKMSSMVEDWISQAN 601
            VF++PP+ IRKVI+AT+IAETSITIDDVVYVIDCGKHKENRYNPQKK+SSMVEDWIS+AN
Sbjct: 977  VFLNPPDGIRKVIIATNIAETSITIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWISRAN 1036

Query: 600  ARQRCGRAGRVKPGICFCLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKSLSLGDITSF 421
            A+QR GRAGRVKPGICFCLYTR+RFEKLMRPYQVPEMLRMPLVELCLQIK LSLG I  F
Sbjct: 1037 AKQRRGRAGRVKPGICFCLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLSLGQIKPF 1096

Query: 420  LLKAIEPPRKEAVTSAISTLYEVGAIEGEEELTPLGFHLAKLPVDVLIGKMMLYGGIFGC 241
            L KA+EPP++EA+ SAIS LYEVGA+EG+EELTPLG HLAKLPVDVLIGKM+LYGGIFGC
Sbjct: 1097 LSKALEPPKEEAMNSAISLLYEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGC 1156

Query: 240  LSPILSIAAFLSYKSPFVYPKDEKQNVDRAKSSLLADKLDNENEADVGNRQSDHLLMMVA 61
            LSPILSI+A LSYKSPF+YPKDEKQNV+RAK +LL++KLD  ++ +   RQSDHLLMM A
Sbjct: 1157 LSPILSISACLSYKSPFLYPKDEKQNVERAKLALLSEKLDESSDLNDAERQSDHLLMMAA 1216

Query: 60   YNKWAKILHER 28
            Y KW KI  E+
Sbjct: 1217 YRKWEKIFREK 1227