BLASTX nr result
ID: Cinnamomum23_contig00008066
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00008066
(912 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation spec... 166 2e-38
emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera] 156 2e-35
ref|XP_010651729.1| PREDICTED: cleavage and polyadenylation spec... 154 6e-35
emb|CBI26829.3| unnamed protein product [Vitis vinifera] 147 1e-32
ref|XP_010271396.1| PREDICTED: cleavage and polyadenylation spec... 143 2e-31
ref|XP_010107067.1| hypothetical protein L484_001390 [Morus nota... 140 2e-30
ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation spec... 138 5e-30
gb|KDP38118.1| hypothetical protein JCGZ_04761 [Jatropha curcas] 138 5e-30
ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation spec... 136 2e-29
ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prun... 135 4e-29
ref|XP_011463169.1| PREDICTED: cleavage and polyadenylation spec... 133 1e-28
ref|XP_009351551.1| PREDICTED: cleavage and polyadenylation spec... 131 6e-28
ref|XP_011021767.1| PREDICTED: cleavage and polyadenylation spec... 130 2e-27
ref|XP_011021766.1| PREDICTED: cleavage and polyadenylation spec... 130 2e-27
ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation spec... 130 2e-27
ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation spec... 130 2e-27
ref|XP_008381750.1| PREDICTED: cleavage and polyadenylation spec... 128 5e-27
ref|XP_007045271.1| Cleavage and polyadenylation specificity fac... 128 6e-27
gb|KDO60762.1| hypothetical protein CISIN_1g043917mg, partial [C... 127 1e-26
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 127 1e-26
>ref|XP_010271360.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Nelumbo nucifera]
Length = 694
Score = 166 bits (421), Expect = 2e-38
Identities = 85/205 (41%), Positives = 128/205 (62%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
++ + P+++ G + SEGILVMEK KKA++VH+ ELL LGVEEH+VQFAYCCPV+V +
Sbjct: 486 NTESFPMVQTG-HKVSEGILVMEKMKKAQIVHQSELLPMLGVEEHQVQFAYCCPVHVRNV 544
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
N S S+ + G S L+ + S S + + + L +S+Q WLH L+++L
Sbjct: 545 D-NSKSHEHGSESSEPVGFSTSLQPCAMSSSSIKIADPSLENILLSSEQFLWLHLLFVEL 603
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFFCCSWSLVDENLAW 371
K G + EF D+LQL SFH+ +CP+ +CP++++ E + FCC WS +DE L W
Sbjct: 604 SNKFPGEKILEFPDNLQLQSFHVHVCPDANCPYKVKEVIEDKPAVHFCCRWSTLDEKLGW 663
Query: 370 RVLSIMKDLDLSQ*TRQCHYSLGRQ 296
R++S+M+ LDL+ YS R+
Sbjct: 664 RIISVMQGLDLTYSRPHTPYSKKRK 688
>emb|CAN61405.1| hypothetical protein VITISV_014259 [Vitis vinifera]
Length = 328
Score = 156 bits (395), Expect = 2e-35
Identities = 78/192 (40%), Positives = 114/192 (59%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
++ A +++ DER +EGIL++EK+KKAKVVH++ELL +G ++H VQFAYCCPV + +
Sbjct: 165 ETKATSXLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCPVQIGNL 224
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
+ + G+ L N S SD+C+WLH+L+ KL
Sbjct: 225 ERTK-------------GMDFALSKNVVS----------------TSDECSWLHQLFAKL 255
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFFCCSWSLVDENLAW 371
K G ++Q+F HLQ+ S HI +C CP+R G + S FFCC+WS+ D NLAW
Sbjct: 256 STKLGG-NIQDFGQHLQVDSIHISVCLKDICPYRTTDGPQKESAVFFCCTWSVADVNLAW 314
Query: 370 RVLSIMKDLDLS 335
++SIM++LDLS
Sbjct: 315 EIISIMENLDLS 326
>ref|XP_010651729.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Vitis vinifera]
Length = 649
Score = 154 bits (390), Expect = 6e-35
Identities = 77/192 (40%), Positives = 113/192 (58%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
++ A ++++ DER +EGIL++EK+KKAKVVH++ELL +G ++H VQFAYCCPV + +
Sbjct: 486 ETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCPVQIGNL 545
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
+ + G+ L N S SD+C+WLH L+ KL
Sbjct: 546 ERTK-------------GMDFALSKNVVS----------------TSDECSWLHLLFAKL 576
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFFCCSWSLVDENLAW 371
K G ++Q+F HLQ+ S HI +C CP+R G + FFCC+WS+ D NLAW
Sbjct: 577 ATKLGG-NIQDFGQHLQVDSIHISVCLKDICPYRTTDGPQKEPAVFFCCTWSVADVNLAW 635
Query: 370 RVLSIMKDLDLS 335
++SIM++LDLS
Sbjct: 636 EIISIMENLDLS 647
>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
Length = 686
Score = 147 bits (370), Expect = 1e-32
Identities = 75/192 (39%), Positives = 106/192 (55%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
++ A ++++ DER +EGIL++EK+KKAKVVH++ELL +G ++H VQFAYCCP VST
Sbjct: 541 ETEATSVLQVHDERVAEGILIVEKSKKAKVVHQNELLLMIGKDKHDVQFAYCCPNVVST- 599
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
SD+C+WLH L+ KL
Sbjct: 600 ----------------------------------------------SDECSWLHLLFAKL 613
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFFCCSWSLVDENLAW 371
K G ++Q+F HLQ+ S HI +C CP+R G + FFCC+WS+ D NLAW
Sbjct: 614 ATKLGG-NIQDFGQHLQVDSIHISVCLKDICPYRTTDGPQKEPAVFFCCTWSVADVNLAW 672
Query: 370 RVLSIMKDLDLS 335
++SIM++LDLS
Sbjct: 673 EIISIMENLDLS 684
>ref|XP_010271396.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Nelumbo nucifera]
Length = 903
Score = 143 bits (360), Expect = 2e-31
Identities = 71/172 (41%), Positives = 106/172 (61%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
++ + P ++ G + SEGILVMEK KKA++VH ELL LGVEEH+VQFAYCCPV+V +
Sbjct: 731 NTESFPTVQTGHNKVSEGILVMEKMKKAQIVHRSELLPMLGVEEHQVQFAYCCPVHVRNV 790
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
N S S+ + G S L+ + S SL + + + L +S++ WLH L+++L
Sbjct: 791 -DNSKSHEHGSESSEPVGFSTSLQPCAMSSSLIKIADPSLENMLLSSEEFLWLHLLFVEL 849
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFFCCSWS 395
K G + EF D+LQ SFH+ +CP+ +CP++++ E + FCC WS
Sbjct: 850 SNKLPGEKILEFPDNLQPKSFHVHVCPDANCPYKVKEVIEDKHAVHFCCRWS 901
>ref|XP_010107067.1| hypothetical protein L484_001390 [Morus notabilis]
gi|587969209|gb|EXC54202.1| hypothetical protein
L484_001390 [Morus notabilis]
Length = 244
Score = 140 bits (352), Expect = 2e-30
Identities = 72/186 (38%), Positives = 110/186 (59%), Gaps = 1/186 (0%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ DER +EGI VMEK KKAKVVH+DELL LG ++H VQ AYCCP++V
Sbjct: 74 LQVTDERVAEGIFVMEKGKKAKVVHQDELLLMLGEKQHIVQHAYCCPIHVK--------- 124
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
NS S A+H TL+ + L +D+C W + L ++ S
Sbjct: 125 ------------------NSES---ADH--TLVNNVLCITDRCFWHRLFFAVLCDEFSDG 161
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTFF-CCSWSLVDENLAWRVLSIM 353
++++F +HLQ+ SFH+ +C CP+RI + +S + F CC+WS+ DE +AW+++SI+
Sbjct: 162 NVRDFGEHLQVESFHLSICSKDSCPYRITDSAQNKSESLFCCCTWSVEDEKIAWKIISIL 221
Query: 352 KDLDLS 335
K+ DL+
Sbjct: 222 KNFDLN 227
>ref|XP_012072306.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Jatropha curcas]
Length = 658
Score = 138 bits (348), Expect = 5e-30
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ DER + GILVMEK KKA+VVH+DELL LG ++H ++FAYCCPVYV
Sbjct: 493 LQVTDERVTNGILVMEKCKKARVVHQDELLLMLGKKQHDIRFAYCCPVYVE--------- 543
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
+L +A T L S++C WL +L+ +L G
Sbjct: 544 ---------------------NLDVARRELTTAHEVLDLSEKCCWLQQLFTELTTDFPGK 582
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFR--IERGREGRSTTFFCCSWSLVDENLAWRVLSI 356
Q +HL++ SFH+ +C +CP+R I+ RE + FFCCSWS+ DE AW +++
Sbjct: 583 CFQILGEHLEMESFHVSICMKDECPYRVMIDSPREKSTAMFFCCSWSVADEKFAWEIITT 642
Query: 355 MKDLDLS 335
M+ L+
Sbjct: 643 MEKCHLT 649
>gb|KDP38118.1| hypothetical protein JCGZ_04761 [Jatropha curcas]
Length = 379
Score = 138 bits (348), Expect = 5e-30
Identities = 69/187 (36%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ DER + GILVMEK KKA+VVH+DELL LG ++H ++FAYCCPVYV
Sbjct: 214 LQVTDERVTNGILVMEKCKKARVVHQDELLLMLGKKQHDIRFAYCCPVYVE--------- 264
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
+L +A T L S++C WL +L+ +L G
Sbjct: 265 ---------------------NLDVARRELTTAHEVLDLSEKCCWLQQLFTELTTDFPGK 303
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFR--IERGREGRSTTFFCCSWSLVDENLAWRVLSI 356
Q +HL++ SFH+ +C +CP+R I+ RE + FFCCSWS+ DE AW +++
Sbjct: 304 CFQILGEHLEMESFHVSICMKDECPYRVMIDSPREKSTAMFFCCSWSVADEKFAWEIITT 363
Query: 355 MKDLDLS 335
M+ L+
Sbjct: 364 MEKCHLT 370
>ref|XP_008221359.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Prunus mume]
Length = 943
Score = 136 bits (342), Expect = 2e-29
Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 2/190 (1%)
Frame = -3
Query: 895 PLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNEL 716
P + + DER +EG+LVME+ KKAKVVH+DELL LG ++H+V+FAYCCPV + +
Sbjct: 494 PRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVRFAYCCPVDIGNL----- 548
Query: 715 SCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHR-LYIKLIEKC 539
G+T S T +L S+ C+ L R L KL +
Sbjct: 549 ---------GETKSS-----------------TTNDGQLCKSETCSRLLRQLSAKLSNEF 582
Query: 538 SGMDLQEFSDHLQLSSFHICLCPNKDCPFRI-ERGREGRSTTFFCCSWSLVDENLAWRVL 362
S ++Q+F DHLQ+ SFH+ +C +CP+R+ + + + FFCCSW + DE LAW+++
Sbjct: 583 SQGNIQDFEDHLQVESFHVSICLKNNCPYRLMDVQNKSQEAAFFCCSWGMADEKLAWKII 642
Query: 361 SIMKDLDLSQ 332
SI ++ ++ Q
Sbjct: 643 SICQNFNVHQ 652
>ref|XP_007225129.1| hypothetical protein PRUPE_ppa002557mg [Prunus persica]
gi|462422065|gb|EMJ26328.1| hypothetical protein
PRUPE_ppa002557mg [Prunus persica]
Length = 658
Score = 135 bits (340), Expect = 4e-29
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Frame = -3
Query: 895 PLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNEL 716
P + + DER +EG+LVME+ KKAKVVH+DELL LG ++H+VQFAYCCP + +
Sbjct: 494 PRLRVSDERVAEGVLVMERNKKAKVVHQDELLLMLGEKKHQVQFAYCCPADIGHL----- 548
Query: 715 SCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHR-LYIKLIEKC 539
G+T S T +L S+ C+ L R L KL +
Sbjct: 549 ---------GETKSS-----------------TTNDGQLCKSETCSRLLRQLSAKLSNEF 582
Query: 538 SGMDLQEFSDHLQLSSFHICLCPNKDCPFRI-ERGREGRSTTFFCCSWSLVDENLAWRVL 362
S ++Q+F DHLQ+ SFH+ +C +CP+R+ + + + FFCCSW DE LAW+++
Sbjct: 583 SQGNIQDFEDHLQVESFHVSICLKNNCPYRLMDVQNKSQEAAFFCCSWGTADEKLAWKII 642
Query: 361 SIMKDLDLSQ*TRQC 317
SI ++ ++ Q + C
Sbjct: 643 SICQNFNVHQHKQGC 657
>ref|XP_011463169.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Fragaria vesca subsp. vesca]
Length = 636
Score = 133 bits (335), Expect = 1e-28
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
+S ++P + + D+R +EGILVMEK KKAKVVH+DEL LG ++H+V+FAYCCP ++
Sbjct: 479 NSKSIPRLRVSDDRVAEGILVMEKNKKAKVVHQDELPLMLGEKKHQVKFAYCCPAHIG-- 536
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
N S L S + L L KL
Sbjct: 537 -------------NSQENTSLPLSSTNNDL----------------------LQLFSAKL 561
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRI--ERGREGRSTTFFCCSWSLVDENL 377
+ S ++Q F DHLQL S H+ +C N DCP+R+ E R FFCCSW + DE L
Sbjct: 562 ANELSEGNIQHFGDHLQLESIHVSICSNNDCPYRLSDNGAEEQREPVFFCCSWEMEDEKL 621
Query: 376 AWRVLSI 356
AW+V+SI
Sbjct: 622 AWKVISI 628
>ref|XP_009351551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Pyrus x bretschneideri]
Length = 663
Score = 131 bits (330), Expect = 6e-28
Identities = 69/192 (35%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Frame = -3
Query: 895 PLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNEL 716
P +++ DER +EG+LVMEK+KK KVVH+DEL+ LG ++H+VQFAYCCPV +K +
Sbjct: 494 PGLQVSDERAAEGVLVMEKSKKTKVVHQDELMLMLGEKKHQVQFAYCCPVQTGNLKEAKS 553
Query: 715 SCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCS 536
+ N L +E G L L RL KL + S
Sbjct: 554 T-----------------SGNEDLLCKSERGSRL-------------LRRLSAKLSNELS 583
Query: 535 GMDLQEFSDHLQLSSFHICLCPNKDCPFRIERG----REGRSTTFFCCSWSLVDENLAWR 368
++Q+F DHL+++SF +C ++CP R+ G + +FCCSW++ DE LAW+
Sbjct: 584 EGNIQDFEDHLEVASFRASICLKENCPHRLLDGHGVRNKSEEAVYFCCSWAMADEKLAWQ 643
Query: 367 VLSIMKDLDLSQ 332
V+SI ++ + +
Sbjct: 644 VISICQNFSMHE 655
>ref|XP_011021767.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Populus euphratica]
gi|743822726|ref|XP_011021768.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 3-II isoform
X2 [Populus euphratica]
Length = 629
Score = 130 bits (326), Expect = 2e-27
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ DER +EGIL+MEK KKA+VVH+D+LL L ++H VQFAYCC + ++
Sbjct: 465 LQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEETR--- 521
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
N D LG SD+C+ L L+ +L SG+
Sbjct: 522 ------NRDDA-------------------------LGLSDKCSSLQLLFKELSNYFSGV 550
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFR-IERGREGRSTTFFCCSWSLVDENLAWRVLSIM 353
++Q+ +HLQ+ SFH+ +C +CP+R I+ ++ +T +FCCSWS DE LAW ++S M
Sbjct: 551 NIQDLGEHLQVESFHVSVCVKDNCPYRIIDDSQKEAATVYFCCSWSAADEKLAWEIISAM 610
Query: 352 KDLDLSQ*TRQCHYSLGR 299
+ L C S+ R
Sbjct: 611 ERFSLID-NLPCRNSISR 627
>ref|XP_011021766.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Populus euphratica]
Length = 657
Score = 130 bits (326), Expect = 2e-27
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 1/198 (0%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ DER +EGIL+MEK KKA+VVH+D+LL L ++H VQFAYCC + ++
Sbjct: 493 LQVNDERVAEGILIMEKGKKARVVHQDDLLLMLRQKKHDVQFAYCCAAQLDNLEETR--- 549
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
N D LG SD+C+ L L+ +L SG+
Sbjct: 550 ------NRDDA-------------------------LGLSDKCSSLQLLFKELSNYFSGV 578
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFR-IERGREGRSTTFFCCSWSLVDENLAWRVLSIM 353
++Q+ +HLQ+ SFH+ +C +CP+R I+ ++ +T +FCCSWS DE LAW ++S M
Sbjct: 579 NIQDLGEHLQVESFHVSVCVKDNCPYRIIDDSQKEAATVYFCCSWSAADEKLAWEIISAM 638
Query: 352 KDLDLSQ*TRQCHYSLGR 299
+ L C S+ R
Sbjct: 639 ERFSLID-NLPCRNSISR 655
>ref|XP_009608302.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X2 [Nicotiana tomentosiformis]
Length = 606
Score = 130 bits (326), Expect = 2e-27
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ D+R +EG+L M+K + K+VH++EL+ +G E H+VQFAYCCPV VS C
Sbjct: 450 VQVCDDRVAEGVLTMQKNQHPKIVHQNELVAMVGGENHEVQFAYCCPVRVSD------EC 503
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
++ G+ N+P + D+C WLH LY KL +
Sbjct: 504 KDVAPSPGE---------NTPPVL----------------DKCLWLHLLYTKLSNDFQDV 538
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTF-FCCSWSLVDENLAWRVLSIM 353
Q D LQ+ SF + +C + CP R + S T FCC WS+VDE LAWRV+SIM
Sbjct: 539 TYQNDGDRLQIESFTVSVCLKEKCPHRTHVSPDSTSETVNFCCLWSMVDEKLAWRVISIM 598
Query: 352 KDLDL 338
K+L+L
Sbjct: 599 KNLEL 603
>ref|XP_009608301.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II isoform X1 [Nicotiana tomentosiformis]
Length = 649
Score = 130 bits (326), Expect = 2e-27
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 1/185 (0%)
Frame = -3
Query: 889 IEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSC 710
+++ D+R +EG+L M+K + K+VH++EL+ +G E H+VQFAYCCPV VS C
Sbjct: 493 VQVCDDRVAEGVLTMQKNQHPKIVHQNELVAMVGGENHEVQFAYCCPVRVSD------EC 546
Query: 709 SIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGM 530
++ G+ N+P + D+C WLH LY KL +
Sbjct: 547 KDVAPSPGE---------NTPPVL----------------DKCLWLHLLYTKLSNDFQDV 581
Query: 529 DLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRSTTF-FCCSWSLVDENLAWRVLSIM 353
Q D LQ+ SF + +C + CP R + S T FCC WS+VDE LAWRV+SIM
Sbjct: 582 TYQNDGDRLQIESFTVSVCLKEKCPHRTHVSPDSTSETVNFCCLWSMVDEKLAWRVISIM 641
Query: 352 KDLDL 338
K+L+L
Sbjct: 642 KNLEL 646
>ref|XP_008381750.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II [Malus domestica]
Length = 663
Score = 128 bits (322), Expect = 5e-27
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 5/193 (2%)
Frame = -3
Query: 895 PLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNEL 716
P +++ DER +EG+LVMEK+KK KVVH++EL+ LG ++H+VQFAYCCPV +K
Sbjct: 494 PGLQVSDERAAEGVLVMEKSKKTKVVHQEELMLMLGEKKHQVQFAYCCPVQTGNLK---- 549
Query: 715 SCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCA-WLHRLYIKLIEKC 539
E+ S S + +L S++C+ L RL KL +
Sbjct: 550 ------------------EAKSTSGN---------DDQLCKSERCSRLLRRLSAKLSNEF 582
Query: 538 SGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERG----REGRSTTFFCCSWSLVDENLAW 371
S ++Q+F DHL+++SF +C ++CP R+ G + +FCCSW++ DE LAW
Sbjct: 583 SEGNIQDFEDHLEVASFRASVCLKENCPHRLLDGHGVRNKSEEAVYFCCSWAMADEKLAW 642
Query: 370 RVLSIMKDLDLSQ 332
+V+SI ++ + +
Sbjct: 643 QVISICQNFSMHE 655
>ref|XP_007045271.1| Cleavage and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao] gi|508709206|gb|EOY01103.1| Cleavage
and polyadenylation specificity factor 73 kDa subunit-II
[Theobroma cacao]
Length = 657
Score = 128 bits (321), Expect = 6e-27
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 1/192 (0%)
Frame = -3
Query: 910 DSAALPLIEIGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTI 731
DS A+P +++ DER +EGILV+EK KKAKV+H+DELL LG +H+VQFAYC P+ +
Sbjct: 485 DSKAIPGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMRTERL 544
Query: 730 KGNELSCSIISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKL 551
+ ++ S L A+ L D+C + L KL
Sbjct: 545 E----------------------KTRSEDLPSAD-------DLLCGLDKCTLISLLSTKL 575
Query: 550 IEKCSGMDLQEFSDHLQLSSFHICLCPNKDCPFRIERGREGRS-TTFFCCSWSLVDENLA 374
+ S ++Q+ + LQ+ SF + +C +CP RI + S FFCCSWS+ DE LA
Sbjct: 576 SNELSDGNIQDLGEQLQVESFCLSICLKDNCPHRISDSLQNDSEVVFFCCSWSVADEMLA 635
Query: 373 WRVLSIMKDLDL 338
W+++SIMK+ L
Sbjct: 636 WKIISIMKNYTL 647
>gb|KDO60762.1| hypothetical protein CISIN_1g043917mg, partial [Citrus sinensis]
Length = 423
Score = 127 bits (318), Expect = 1e-26
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = -3
Query: 883 IGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSCSI 704
I DER +EGILV+EK++KAKVVH+DELL LG + H+VQFAYCCPV V ++
Sbjct: 267 IKDERVAEGILVLEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEK------- 319
Query: 703 ISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGMDL 524
+ + L + N SL + L KL K S ++
Sbjct: 320 FTTTSLTPTARMLRDPNKSSL----------------------IRLLVAKLSRKLSEGNI 357
Query: 523 QEFSDHLQLSSFHICLCPNKDCPFRIERGREGR-STTFFCCSWSLVDENLAWRVLSIMKD 347
Q+F +HLQ+ SFH+ +C CP+RI G E + T FFCC+WS D+ LA +++S M++
Sbjct: 358 QDFGEHLQVESFHLSVCLKDTCPYRITNGLEDKPRTAFFCCTWSAADDKLARKIISAMEN 417
Query: 346 LDL 338
DL
Sbjct: 418 RDL 420
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 127 bits (318), Expect = 1e-26
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
Frame = -3
Query: 883 IGDERTSEGILVMEKTKKAKVVHEDELLQTLGVEEHKVQFAYCCPVYVSTIKGNELSCSI 704
I DER +EGILV+EK++KAKVVH+DELL LG + H+VQFAYCCPV V ++
Sbjct: 490 IKDERVAEGILVLEKSEKAKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEK------- 542
Query: 703 ISKPNGDTGVSCLLESNSPSLSLAEHGQTLMGSELGASDQCAWLHRLYIKLIEKCSGMDL 524
+ + L + N SL + L KL K S ++
Sbjct: 543 FTTTSLTPTARMLRDPNKSSL----------------------IRLLVAKLSRKLSEGNI 580
Query: 523 QEFSDHLQLSSFHICLCPNKDCPFRIERGREGR-STTFFCCSWSLVDENLAWRVLSIMKD 347
Q+F +HLQ+ SFH+ +C CP+RI G E + T FFCC+WS D+ LA +++S M++
Sbjct: 581 QDFGEHLQVESFHLSVCLKDTCPYRITNGLEDKPRTAFFCCTWSAADDKLARKIISAMEN 640
Query: 346 LDL 338
DL
Sbjct: 641 RDL 643