BLASTX nr result

ID: Cinnamomum23_contig00007958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00007958
         (1168 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006436960.1| hypothetical protein CICLE_v10031176mg [Citr...    61   1e-06
ref|XP_006485089.1| PREDICTED: U5 small nuclear ribonucleoprotei...    59   5e-06

>ref|XP_006436960.1| hypothetical protein CICLE_v10031176mg [Citrus clementina]
           gi|557539156|gb|ESR50200.1| hypothetical protein
           CICLE_v10031176mg [Citrus clementina]
          Length = 540

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/63 (47%), Positives = 43/63 (68%)
 Frame = +1

Query: 49  EETQRKS*DSKKQLARLRSQHSETGSRKAVCNGTRDVKVEHRSTSPVHIDEKLPRTQAQS 228
           EE +++  DS+ +LARLR Q +   SR +  NGT+ VKVE RS SPVHI+E   R ++QS
Sbjct: 58  EEAEKRLEDSQSKLARLRCQDNVVSSRSSPANGTKSVKVERRSVSPVHINEGSSRNKSQS 117

Query: 229 KPQ 237
           + +
Sbjct: 118 RTE 120


>ref|XP_006485089.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Citrus sinensis]
          Length = 540

 Score = 59.3 bits (142), Expect = 5e-06
 Identities = 29/63 (46%), Positives = 43/63 (68%)
 Frame = +1

Query: 49  EETQRKS*DSKKQLARLRSQHSETGSRKAVCNGTRDVKVEHRSTSPVHIDEKLPRTQAQS 228
           EE +++  DS+ +LARLR Q +   SR +  NGT+ VKVE RS SP+HI+E   R ++QS
Sbjct: 58  EEAEKRLEDSQSKLARLRCQDNVVSSRGSPANGTKSVKVERRSVSPLHINEGSSRNRSQS 117

Query: 229 KPQ 237
           + +
Sbjct: 118 RTE 120


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