BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00007264
         (4151 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I sub...  1708   0.0  
ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1706   0.0  
ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymer...  1675   0.0  
ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I sub...  1654   0.0  
ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I sub...  1651   0.0  
ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I sub...  1645   0.0  
ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymer...  1645   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1645   0.0  
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1644   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1637   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1637   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1634   0.0  
gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glyci...  1634   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1632   0.0  
emb|CDP07938.1| unnamed protein product [Coffea canephora]           1623   0.0  
ref|XP_009355260.1| PREDICTED: DNA-directed RNA polymerase I sub...  1622   0.0  
ref|XP_004486057.1| PREDICTED: DNA-directed RNA polymerase I sub...  1622   0.0  
ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I sub...  1621   0.0  
ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I sub...  1620   0.0  
ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I sub...  1615   0.0  

>ref|XP_010659082.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Vitis vinifera]
          Length = 1178

 Score = 1708 bits (4423), Expect = 0.0
 Identities = 838/1179 (71%), Positives = 987/1179 (83%), Gaps = 3/1179 (0%)
 Frame = -3

Query: 3945 LQTSLAMGRIPTA-EDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKIL 3769
            ++   A+ ++ TA  D + L+ELF+ HI+SFDH +E GLET+++ +KP++V+D  +K+ L
Sbjct: 1    MENEQALEKMATAGPDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKL 60

Query: 3768 RIWLEHPELFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERF 3589
            RIW   PEL+ P +E  +++ R+ + P ECR+A +SY G+  AD CFQ+ N G  IRE+F
Sbjct: 61   RIWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGN-GVAIREKF 119

Query: 3588 NFGHIPIMLKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMA 3409
            N G  PIMLKSKLCHLRGA P KL+S KEE++EMGGYFI +G+ER+ RLLI+PKRNYPM+
Sbjct: 120  NLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMS 179

Query: 3408 FVRDTFRNRGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIV 3229
             VR++FR+R EGY+++AVVIRCVREDQSAVT+KLYYL NGSARLGF I+GRE LLPVG+V
Sbjct: 180  MVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVV 239

Query: 3228 LKALVDTADKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQ 3049
            LKAL+DT D EIY+SLT CYSE +E G+GA+G+QLVGER KIILDEVR+LSL  R QCLQ
Sbjct: 240  LKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQ 299

Query: 3048 HIGEYFRPIMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAV 2869
            HIGE+F+ +M+ L+ ES+  V  A+LR+YIFVHL +++DKFNLLIFM+ KLF+++D+T+V
Sbjct: 300  HIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSV 359

Query: 2868 PDNADALQNQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKV 2689
            PDN D LQNQEVL PG +ITIYLKEKLQEWL+K+R LL +E+ NK + F+F +LAH+KKV
Sbjct: 360  PDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKV 418

Query: 2688 MDKCYPATIGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSF 2509
            MDK     I  A+E+M+K GRL T S LDLQQR  MT+ AERLNFLRFLSHFR+VHRG+ 
Sbjct: 419  MDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGAS 478

Query: 2508 FTGMRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIH 2329
            F G+RTT+VRKLLPE+WGFLCPVHTPDG PCGLLNH+ STCRI+S+FDS+GNT+DF KI 
Sbjct: 479  FAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIR 538

Query: 2328 KSIKDVLVGMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAAS 2149
             SI  VL+G+GM P  P++ QAGPP VL V+LDGRV+G I SSE+E  V H+RRLK++A 
Sbjct: 539  MSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAI 598

Query: 2148 SKIPDDLEVGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYM 1969
            S IPDDLEVGY+PL++GGAYPGL+LFTSPSRFVRPVRNIS+P +E   +ELIGPFEQ YM
Sbjct: 599  SVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYM 658

Query: 1968 EIRCPDGGGGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGF 1792
            EIRCPDG  GGR + FPATHEEIHPTG+LSVVASLTPWSDHNQSPRNMYQCQM KQTM F
Sbjct: 659  EIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAF 718

Query: 1791 SSQALQFRTDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMI 1612
            SSQA+  R D KLYHLQTPQ+PIVRT+AY KY MDEFPTGTNAIVAVLAY+GYDMEDAMI
Sbjct: 719  SSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMI 778

Query: 1611 LNKSSVERGLFHGHIYQVETFDLV-EQRKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQ 1435
            LNKSSV+RGL HG IYQ ET DL  E  K D+  ++F RSN+DKS N LIDSDGLPYVGQ
Sbjct: 779  LNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQ 838

Query: 1434 MINPGEPFISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPV 1255
            MINP EP+ S++N          LKGSEP IVDYV++D    K   QKVN+     RNP+
Sbjct: 839  MINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNKKH-PQKVNIRFRRPRNPI 897

Query: 1254 IGDKFSSRHGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKG 1075
            IGDKFSSRHGQKGVCSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKG
Sbjct: 898  IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKG 957

Query: 1074 GSLHGKFMDATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTE 895
            GSLHGKF+DATPF++S++ A G + ++S SLVDELG MLTSYGFNYHG+EV+YSG  GTE
Sbjct: 958  GSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTE 1017

Query: 894  LACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLA 715
            L CEIFIGPVYYQRLRHMVSDKFQVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS+LA
Sbjct: 1018 LTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLA 1077

Query: 714  HGAAYLLHDRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICH 535
            HGAAYLLHDRLHTCSD+HIADVCSLCGSIL TS IQ QKRA R IGGLPPGRAPKKV CH
Sbjct: 1078 HGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCH 1137

Query: 534  ACKTSRGMETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            AC+TS+GMETV+MP+IFR LA ELAAMN+KMTLQLS+ A
Sbjct: 1138 ACQTSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGA 1176


>ref|XP_010659083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X2
            [Vitis vinifera] gi|731414307|ref|XP_010659084.1|
            PREDICTED: DNA-directed RNA polymerase I subunit RPA2
            isoform X2 [Vitis vinifera]
          Length = 1169

 Score = 1706 bits (4419), Expect = 0.0
 Identities = 835/1164 (71%), Positives = 979/1164 (84%), Gaps = 2/1164 (0%)
 Frame = -3

Query: 3903 DLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMRE 3724
            D + L+ELF+ HI+SFDH +E GLET+++ +KP++V+D  +K+ LRIW   PEL+ P +E
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVEVVDSFTKQKLRIWFGQPELYPPQKE 66

Query: 3723 NVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLCH 3544
              +++ R+ + P ECR+A +SY G+  AD CFQ+ N G  IRE+FN G  PIMLKSKLCH
Sbjct: 67   RSARTMRDALYPFECRQAKISYSGKLLADVCFQYGN-GVAIREKFNLGQFPIMLKSKLCH 125

Query: 3543 LRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYSN 3364
            LRGA P KL+S KEE++EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR++FR+R EGY++
Sbjct: 126  LRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTD 185

Query: 3363 QAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYDS 3184
            +AVVIRCVREDQSAVT+KLYYL NGSARLGF I+GRE LLPVG+VLKAL+DT D EIY+S
Sbjct: 186  KAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYES 245

Query: 3183 LTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELDM 3004
            LT CYSE +E G+GA+G+QLVGER KIILDEVR+LSL  R QCLQHIGE+F+ +M+ L+ 
Sbjct: 246  LTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLEN 305

Query: 3003 ESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQP 2824
            ES+  V  A+LR+YIFVHL +++DKFNLLIFM+ KLF+++D+T+VPDN D LQNQEVL P
Sbjct: 306  ESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLP 365

Query: 2823 GLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIES 2644
            G +ITIYLKEKLQEWL+K+R LL +E+ NK + F+F +LAH+KKVMDK     I  A+E+
Sbjct: 366  GHLITIYLKEKLQEWLYKARRLLQDEI-NKRKNFEFSSLAHVKKVMDKNPSRQISLAVEN 424

Query: 2643 MIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLPE 2464
            M+K GRL T S LDLQQR  MT+ AERLNFLRFLSHFR+VHRG+ F G+RTT+VRKLLPE
Sbjct: 425  MLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPE 484

Query: 2463 SWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEPL 2284
            +WGFLCPVHTPDG PCGLLNH+ STCRI+S+FDS+GNT+DF KI  SI  VL+G+GM P 
Sbjct: 485  AWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPA 544

Query: 2283 PPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPLT 2104
             P++ QAGPP VL V+LDGRV+G I SSE+E  V H+RRLK++A S IPDDLEVGY+PL+
Sbjct: 545  LPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLS 604

Query: 2103 LGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR-SY 1927
            +GGAYPGL+LFTSPSRFVRPVRNIS+P +E   +ELIGPFEQ YMEIRCPDG  GGR + 
Sbjct: 605  MGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNI 664

Query: 1926 FPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLYH 1747
            FPATHEEIHPTG+LSVVASLTPWSDHNQSPRNMYQCQM KQTM FSSQA+  R D KLYH
Sbjct: 665  FPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYH 724

Query: 1746 LQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGHI 1567
            LQTPQ+PIVRT+AY KY MDEFPTGTNAIVAVLAY+GYDMEDAMILNKSSV+RGL HG I
Sbjct: 725  LQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQI 784

Query: 1566 YQVETFDLV-EQRKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNXX 1390
            YQ ET DL  E  K D+  ++F RSN+DKS N LIDSDGLPYVGQMINP EP+ S++N  
Sbjct: 785  YQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEV 844

Query: 1389 XXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGVC 1210
                    LKGSEP IVDYV++D    K   QKVN+     RNP+IGDKFSSRHGQKGVC
Sbjct: 845  TSSTRATKLKGSEPVIVDYVALDAKNKKH-PQKVNIRFRRPRNPIIGDKFSSRHGQKGVC 903

Query: 1209 SQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFAN 1030
            SQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF+DATPF++
Sbjct: 904  SQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSD 963

Query: 1029 SIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQRL 850
            S++ A G + ++S SLVDELG MLTSYGFNYHG+EV+YSG  GTEL CEIFIGPVYYQRL
Sbjct: 964  SLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRL 1023

Query: 849  RHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHTCS 670
            RHMVSDKFQVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLHDRLHTCS
Sbjct: 1024 RHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCS 1083

Query: 669  DYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAMPF 490
            D+HIADVCSLCGSIL TS IQ QKRA R IGGLPPGRAPKKV CHAC+TS+GMETV+MP+
Sbjct: 1084 DHHIADVCSLCGSILTTSIIQPQKRAVREIGGLPPGRAPKKVTCHACQTSKGMETVSMPY 1143

Query: 489  IFRQLAVELAAMNVKMTLQLSDQA 418
            IFR LA ELAAMN+KMTLQLS+ A
Sbjct: 1144 IFRFLAAELAAMNIKMTLQLSNGA 1167


>ref|XP_010067710.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
            isoform X1 [Eucalyptus grandis]
            gi|629100116|gb|KCW65881.1| hypothetical protein
            EUGRSUZ_G03213 [Eucalyptus grandis]
          Length = 1173

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 822/1166 (70%), Positives = 970/1166 (83%), Gaps = 2/1166 (0%)
 Frame = -3

Query: 3909 AEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPM 3730
            A D  AL+ELF+ HIESFDH ++ GLETM+  IKP+Q+ DP S K L+IW   PE++ P 
Sbjct: 8    AADYGALRELFRHHIESFDHLVDRGLETMLDKIKPVQIFDPSSDKTLKIWFAKPEVYQPQ 67

Query: 3729 RENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKL 3550
            +E  SK+  + +LP ECR+A  SY G+F     FQ+D+K AV  E+FNFGH+PIMLKSKL
Sbjct: 68   KEGSSKTSHDALLPFECRQAKTSYAGKFVVHLYFQYDDKVAV-HEKFNFGHLPIMLKSKL 126

Query: 3549 CHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGY 3370
            C+L GA P KL+S KEE++EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR++FR+R EGY
Sbjct: 127  CYLNGADPQKLVSWKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGY 186

Query: 3369 SNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIY 3190
            +++AVVIRCVREDQS+VT+KLYYL NGSARLGF I+ RE LLPVG+VLKAL+DT D EIY
Sbjct: 187  TDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIQAREYLLPVGVVLKALIDTNDHEIY 246

Query: 3189 DSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNEL 3010
             SLTSCYSE + RG+G +G+QLV ERAKIILDE+R+L+L  R QCLQHIGE+F+P+M+ L
Sbjct: 247  SSLTSCYSEKYGRGKGVVGNQLVSERAKIILDELRDLTLFTRRQCLQHIGEHFQPVMDGL 306

Query: 3009 DMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVL 2830
            + ES  +V  A+L+DYIFVHL +++DKFNLLIFM+ KLF+++D+T+ PDN D+LQNQEVL
Sbjct: 307  ENESFISVANAVLQDYIFVHLNNNYDKFNLLIFMVQKLFSLIDQTSSPDNPDSLQNQEVL 366

Query: 2829 QPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAI 2650
             PG +ITIYLK+KL++WL K+++LL +E+KNK + FDF +LAH+KKVMDK     IG AI
Sbjct: 367  LPGHLITIYLKDKLEDWLQKAKKLLQDELKNKAKNFDFSSLAHVKKVMDKNPGRQIGSAI 426

Query: 2649 ESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLL 2470
            E+M+K GRL T S LDLQQR   T+ AERLNFLRFLSHFR+VHRG+ F G+RTT+VRKLL
Sbjct: 427  ENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 486

Query: 2469 PESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGME 2290
            PESWGFLCPVHTPDG PCGLLNH+T TCRI+SFFDS+GN +DF KI  SI +VL+G+GM 
Sbjct: 487  PESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGNFRDFVKIRTSILNVLIGIGMT 546

Query: 2289 PLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVP 2110
            P  P++ QAGPP VL VLLDGRV+G I S+E+EK V+++RRLK++ +S IPDDLEVGYVP
Sbjct: 547  PSLPKIVQAGPPDVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDLEVGYVP 606

Query: 2109 LTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGG-R 1933
            L+ GGAYPGL+LFT+PSRF RPVRNIS P   +  +ELIGPFEQ +MEIRCPDGG GG R
Sbjct: 607  LSFGGAYPGLYLFTNPSRFARPVRNISAPVDGSQNIELIGPFEQVFMEIRCPDGGDGGRR 666

Query: 1932 SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKL 1753
            + FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FSSQA+ FR D KL
Sbjct: 667  NEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQAIHFRADQKL 726

Query: 1752 YHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHG 1573
            YHLQTPQ+PIVRT AY+KYC+DEFPTGTNAIVAVLAY+GYDMEDAMILNKSSVERG+FHG
Sbjct: 727  YHLQTPQTPIVRTGAYTKYCIDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVERGMFHG 786

Query: 1572 HIYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHN 1396
             IYQ ET DL EQ  K D+  ++F RSN DKS +  IDSDGLPYVGQMI P EP+ SV+N
Sbjct: 787  QIYQTETIDLSEQSSKSDREQRMFRRSNTDKSAHPWIDSDGLPYVGQMIRPNEPYCSVYN 846

Query: 1395 XXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKG 1216
                       KGSE AIVDYV++D T +K  +QK N+     RNPVIGDKFSSRHGQKG
Sbjct: 847  EVTTTTKNHLRKGSESAIVDYVAVD-TKTKKGLQKANIRFRHPRNPVIGDKFSSRHGQKG 905

Query: 1215 VCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPF 1036
            VCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLESIAAK GSL G+F+DATPF
Sbjct: 906  VCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFVDATPF 965

Query: 1035 ANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQ 856
            A+S K A G   ++S+ LVD++G  L   GFNYHG+EV+YSGV GTEL CEIFIGPVYYQ
Sbjct: 966  ASSTKKANGEEKSESELLVDQIGAKLRKKGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1025

Query: 855  RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHT 676
            RLRHMVSDKFQVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS++AHGAAYLLHDRLHT
Sbjct: 1026 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMVAHGAAYLLHDRLHT 1085

Query: 675  CSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAM 496
            CSDYHIADVCSLCGSIL T F+Q Q+R  R IGGLPP RAPKKV CHAC+TSRGMETVAM
Sbjct: 1086 CSDYHIADVCSLCGSILTTQFVQPQRRPGREIGGLPPIRAPKKVTCHACQTSRGMETVAM 1145

Query: 495  PFIFRQLAVELAAMNVKMTLQLSDQA 418
            P++FR LA ELAAMN+KMTL LS+ A
Sbjct: 1146 PYVFRYLAAELAAMNIKMTLHLSNGA 1171


>ref|XP_008445376.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis melo]
          Length = 1173

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 800/1166 (68%), Positives = 970/1166 (83%), Gaps = 3/1166 (0%)
 Frame = -3

Query: 3906 EDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMR 3727
            ED +AL+ELF+ HIESFDH +++GLET++  IKP+++ D  + K LRIWL  PEL+ P +
Sbjct: 9    EDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQK 68

Query: 3726 ENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLC 3547
            E   ++ RE +LP ECR+A +SY G+F AD CFQ+D K AVIRE+FNFG  PIMLKSKLC
Sbjct: 69   ERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK-AVIREKFNFGQFPIMLKSKLC 127

Query: 3546 HLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYS 3367
            HLRG  P KL+S  EEA+EMGGYF+ +G+ER+ RLLI PKRNYPM+ VR++F +R EGY+
Sbjct: 128  HLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPMSMVRNSFSDRREGYT 187

Query: 3366 NQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYD 3187
            ++AVVIRCVREDQS+VT+KLYYL NGSARLGF ++G+E LLP+G+VLKAL+DT D EIY 
Sbjct: 188  DKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTNDHEIYA 247

Query: 3186 SLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELD 3007
            SLTSCYS+ H + +GA+ +QLVGERAKIILDEVR+L+L DR QCL HIG++F+P+M  L 
Sbjct: 248  SLTSCYSDKHGKSKGAVATQLVGERAKIILDEVRDLALFDRRQCLDHIGQHFQPVMEGLG 307

Query: 3006 MESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQ 2827
             E    V  A+L++YIFVHL +++DKFNLLIFM  KLF+++D+T+VPDN D+LQNQ+VL 
Sbjct: 308  KEKFSTVADAVLKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLL 367

Query: 2826 PGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIE 2647
            PG +IT+YLKEKL++WL KS++LL +E+ N  + F+FC+LAH+KKVMDK     I  A+E
Sbjct: 368  PGQLITLYLKEKLEDWLQKSKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQISSAVE 427

Query: 2646 SMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLP 2467
            +M+K GRL T + LDLQQR   T+ AERLNFLRF+SHFR+VHRG+ F G+RTTTVRKLLP
Sbjct: 428  NMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLP 487

Query: 2466 ESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEP 2287
            ESWGFLCPVHTPDG PCGLLNHLTSTCRI+S+F+SQG  +DF KI  SI  VL+ +GM P
Sbjct: 488  ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFYKIRTSILSVLIAVGMIP 547

Query: 2286 LPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPL 2107
              P++ Q GPP VL VLLDGR++G+I+S+E+EK VAH+RRLK+ +   IPDDLEVGYVPL
Sbjct: 548  SLPKLVQMGPPDVLNVLLDGRLVGYISSNEVEKVVAHLRRLKVLSPHVIPDDLEVGYVPL 607

Query: 2106 TLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR-S 1930
            ++ GAYPGL+LFTSPSRFVRPV+N+S+ P++N  +ELIGPFEQ +MEIRCPDGG GGR  
Sbjct: 608  SISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKD 667

Query: 1929 YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLY 1750
             FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS QA+++R D KLY
Sbjct: 668  EFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLY 727

Query: 1749 HLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGH 1570
            HLQTPQ+PIVRT+ Y+KY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERG+FHG 
Sbjct: 728  HLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ 787

Query: 1569 IYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNX 1393
            IYQ ET DL +Q  +  ++ K+F RSNID S   +ID+DGLPYVGQMI P EP+ S+++ 
Sbjct: 788  IYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDE 847

Query: 1392 XXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGV 1213
                     LKGSE  IVDYVS+D   +K+  QKVN+     RNP+IGDKFSSRHGQKGV
Sbjct: 848  VAGTTRTMKLKGSEAVIVDYVSVD-VKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGV 906

Query: 1212 CSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFA 1033
            CSQLWPDIDMPF  ATGMRPDLIINPHAFPSRMTI ML+ES+AAKGG L+G+F++ATPF 
Sbjct: 907  CSQLWPDIDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFR 966

Query: 1032 NSIKDA-YGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQ 856
            +S+K    G   T++++LVDELG  L   GFNYHGLEV+YSGV GTEL CEIFIGPVYYQ
Sbjct: 967  SSVKKTNAGDGETNAETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1026

Query: 855  RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHT 676
            RLRHMVSDK+QVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS+LAHGA+YLLHDRLHT
Sbjct: 1027 RLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHT 1086

Query: 675  CSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAM 496
            CSD+HIADVCSLCGSIL +SF+Q  KRA R IGGLPPG+APK+V CHACKTS+GMETVAM
Sbjct: 1087 CSDHHIADVCSLCGSILTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAM 1146

Query: 495  PFIFRQLAVELAAMNVKMTLQLSDQA 418
            P++F+ LA ELAAMN+KMTL+LS+ A
Sbjct: 1147 PYVFKYLAAELAAMNIKMTLELSNGA 1172


>ref|XP_010918457.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Elaeis guineensis]
          Length = 1175

 Score = 1651 bits (4275), Expect = 0.0
 Identities = 814/1171 (69%), Positives = 966/1171 (82%), Gaps = 6/1171 (0%)
 Frame = -3

Query: 3912 TAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYP 3733
            T +D +AL+ELF+PHI+SF++F++ GLE  +L I+P+++ DP     LRI+ E+P++F+P
Sbjct: 6    TKQDYEALRELFRPHIDSFNYFLDEGLEKALLSIRPVEISDPSVGGKLRIYFENPQVFHP 65

Query: 3732 MREN-VSKSR---REKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            +RE  ++KS+    E + P ECR+AG +Y+G F    C Q++++  V +   NFGH+PIM
Sbjct: 66   LREGRITKSKGGITEALYPHECRQAGTTYKGEFKVTICLQYNDQQPV-QIPMNFGHLPIM 124

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SKLCHL+ A P KLI  KEEATEMGGYFIC+G+ERL RLLI+PKRNYPM  +R +FR+
Sbjct: 125  LRSKLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSFRS 184

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            RG GYS++AVV+RCVREDQS+VT+KLYYL NGSARLGF IRGRE LLP+GIVLKAL+DT+
Sbjct: 185  RGVGYSDKAVVMRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPIGIVLKALIDTS 244

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EI+ SLT CY++ +++ RGA+GSQ++GERA+IIL+EVR+LSLL  SQCL+HIGEYFRP
Sbjct: 245  DREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYFRP 304

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
             M+  + ESH  V +A+LRDY+FVHL  +HDKFNLLIFML KL+A+VD+T  PDN DALQ
Sbjct: 305  AMDGFENESHTTVAEAVLRDYVFVHLTTNHDKFNLLIFMLQKLYALVDQTVAPDNPDALQ 364

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            NQE+L PG +ITIY+KEK Q+WL+KSR  L++E+    ++ DF  +  + K +++   A+
Sbjct: 365  NQEILLPGHLITIYVKEKFQDWLNKSRRQLLDELGKNEKKLDFSIVHQVVKFLNR-NAAS 423

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +G++IESMIK GRL T S LDL QRE MTI AERLNF RFLSHFRSVHRG+ FT MR T+
Sbjct: 424  LGRSIESMIKVGRLATSSGLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFTKMRITS 483

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+TSTCRISSF+DS+   KDF KI  SI  VLV
Sbjct: 484  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISSFYDSERKVKDFLKIRMSILTVLV 543

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
            G+GM PL P++ +AGPP VL+VLLDG V+G IASSE+EK VAHIR LK+++ S IPDDLE
Sbjct: 544  GVGMTPLLPKLERAGPPEVLHVLLDGCVVGSIASSEVEKAVAHIRSLKLSSLSGIPDDLE 603

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL+LGG YPGL+LFTSPSRF+RPVRN+S     N  +ELIGPFEQA+MEIRC DGG
Sbjct: 604  VGYVPLSLGGTYPGLYLFTSPSRFIRPVRNVSHSSDNNLNIELIGPFEQAFMEIRCADGG 663

Query: 1944 GGGRSY-FPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR   FPATHEEIHPTGILSVVA+LTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQFR
Sbjct: 664  HGGRRQSFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQFR 723

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D K YHLQTPQSPIVRTA+YSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSV+R
Sbjct: 724  ADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDR 783

Query: 1587 GLFHGHIYQVETFDLVEQR-KFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            GL  GHIYQ E+ DL +   + DQ  ++F RS+ DK+    ID+DGLPY+GQ+I+P EP 
Sbjct: 784  GLCRGHIYQTESIDLTKNHDREDQVLEIFARSS-DKTMKSSIDTDGLPYIGQVIHPNEPL 842

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S +N          LKGSEP IVDYVS+DG TSK++MQKVN+     R P+IGDKFSSR
Sbjct: 843  YSSYNTLTSVTKPTLLKGSEPVIVDYVSVDGATSKNYMQKVNIRTRRTRYPIIGDKFSSR 902

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKF+
Sbjct: 903  HGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFV 962

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF NS+ +      + + SLVDELGPML SYGFNYHG+EV+YSGV GTEL CEIFIG
Sbjct: 963  DATPFQNSVSEKDEDGPSKASSLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIG 1022

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGTVD +TRQPI GRK GGGIRFGEMERDSVLAHGAAYLLH
Sbjct: 1023 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLH 1082

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLH+CSDYHIA+VCS CG +L  S IQ QKRA R I GLPP R PK   CHACKTS+GM
Sbjct: 1083 DRLHSCSDYHIAEVCSFCGGVLTASVIQPQKRAIREIHGLPPARTPKSYTCHACKTSKGM 1142

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++F+ LA ELAAMN+KM L+LS++A
Sbjct: 1143 ETVAMPYVFKYLAAELAAMNIKMELRLSNRA 1173


>ref|XP_009414083.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Musa acuminata
            subsp. malaccensis]
          Length = 1169

 Score = 1645 bits (4261), Expect = 0.0
 Identities = 812/1164 (69%), Positives = 952/1164 (81%), Gaps = 2/1164 (0%)
 Frame = -3

Query: 3903 DLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMRE 3724
            D  ALQELF+PHIESFD+F++ GLE   L I+P+++ DP +   LR+ LE P+L  PMR+
Sbjct: 8    DFQALQELFRPHIESFDYFLDEGLEKAFLSIRPIEISDPHTGIKLRVSLEKPQLLPPMRD 67

Query: 3723 NVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLCH 3544
                   E + P ECR+A +SY+G F A  CFQ+D +G V+RE  NFGH+PIMLKSKLCH
Sbjct: 68   G---RLSEPLFPHECRQARISYKGEFRALVCFQYD-EGVVVRENINFGHLPIMLKSKLCH 123

Query: 3543 LRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYSN 3364
            LRGA P KL++ KEEATEMGGYFIC+G+ERL RLLI+ K+NYPM+ VR +FRNRG GY +
Sbjct: 124  LRGADPQKLVAHKEEATEMGGYFICNGLERLVRLLIIQKQNYPMSMVRKSFRNRGPGYGD 183

Query: 3363 QAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYDS 3184
            +AVV+RCVREDQS+VTLKLYYL NGSARLGF IRGRE LLPVGIVLKAL+DT D EI+ S
Sbjct: 184  KAVVMRCVREDQSSVTLKLYYLENGSARLGFWIRGREFLLPVGIVLKALIDTNDHEIFVS 243

Query: 3183 LTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELDM 3004
            LT CY++ ++R +GA+ +QL+GERA+IILDEVR+LSL  RSQCL+HIGEYFRP MN  + 
Sbjct: 244  LTCCYNDRYQREKGAVATQLIGERAQIILDEVRDLSLWTRSQCLKHIGEYFRPAMNGFET 303

Query: 3003 ESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQP 2824
            ESH  V +A+LRDYIFVHL  +HDKFNLLIF+L KL+A+VD+TA PDN DALQNQE+L P
Sbjct: 304  ESHTTVAEAVLRDYIFVHLASNHDKFNLLIFLLQKLYALVDQTAAPDNPDALQNQEILLP 363

Query: 2823 GLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIES 2644
            G +ITIYLKE+LQ+WL KS+  L++E   K +  D  NL  +KK   +   ATIG+AIES
Sbjct: 364  GHLITIYLKERLQDWLKKSKRQLLDETAKKEKNIDIKNLTQVKKFFSRS-SATIGRAIES 422

Query: 2643 MIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLPE 2464
            M+K GRLNT S LDL QRE M+I AERLNF R+LSHFRSVHRG+ F  MRTT+VRKLLPE
Sbjct: 423  MLKIGRLNTASGLDLPQREGMSIQAERLNFFRYLSHFRSVHRGASFAKMRTTSVRKLLPE 482

Query: 2463 SWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEPL 2284
            SWGFLCPV+TPDG PCGLLNH+T  CR++SF+DS+G  KDF KI  SI  VLVG+GM PL
Sbjct: 483  SWGFLCPVNTPDGEPCGLLNHMTCACRVASFYDSEGRVKDFLKIRMSILSVLVGIGMTPL 542

Query: 2283 PPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPLT 2104
             P++ +AGPP VL+VLLDG V+G I+S +IE+ VAHIRRLK++    IP+DLEVGYVPL+
Sbjct: 543  LPKLERAGPPEVLHVLLDGCVVGSISSVKIEEAVAHIRRLKLSGICGIPEDLEVGYVPLS 602

Query: 2103 LGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR-SY 1927
             GGAYPGL++FT+ SRF+RPV N+      +  +ELIGPFEQA+MEIRCPDGG GGR  +
Sbjct: 603  FGGAYPGLYMFTNSSRFIRPVINLIQVTDGSKNIELIGPFEQAFMEIRCPDGGNGGRREF 662

Query: 1926 FPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLYH 1747
            FPATHEEIHPTGILSVVA+LTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQ+R D K YH
Sbjct: 663  FPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQYRADLKSYH 722

Query: 1746 LQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGHI 1567
            LQTPQSPIVRTA+YSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSV+RGL  GHI
Sbjct: 723  LQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGLCRGHI 782

Query: 1566 YQVETFDLV-EQRKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNXX 1390
            YQ E+ DL  +  K D+  ++F RSN D+     IDSDGLPYVGQ I+P EP  S +N  
Sbjct: 783  YQTESIDLANKHEKEDRLLEIFARSN-DRKLKSSIDSDGLPYVGQTIHPSEPLYSTYNTL 841

Query: 1389 XXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGVC 1210
                    LKGSE  I+DYV++DGT SK+++QKVN+     R P+IGDKFSSRHGQKGVC
Sbjct: 842  TSITKPTLLKGSEDVIIDYVAVDGTGSKNYLQKVNIRTRRTRYPIIGDKFSSRHGQKGVC 901

Query: 1209 SQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFAN 1030
            SQ+WPD+DMPFSA TGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKF+DATPF+ 
Sbjct: 902  SQMWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFVDATPFSR 961

Query: 1029 SIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQRL 850
            S+ +A     + S S+VDELGPMLTSYGFNYHG+EV+YSGV GTEL CEIFIGPVYYQRL
Sbjct: 962  SVCNADEDKPSKSSSVVDELGPMLTSYGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRL 1021

Query: 849  RHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHTCS 670
            RHMVSDKFQVRSTGTVD +TRQPI GRK GGGIRFGEMERD+VLAHGAAYLLHDRLH+CS
Sbjct: 1022 RHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDAVLAHGAAYLLHDRLHSCS 1081

Query: 669  DYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAMPF 490
            DYHIADVCS CGS+L  + IQ QKRA R I GLPP R PK  IC +CKT +GMETVAMP+
Sbjct: 1082 DYHIADVCSYCGSVLTATAIQPQKRAVREIHGLPPARTPKNYICQSCKTGKGMETVAMPY 1141

Query: 489  IFRQLAVELAAMNVKMTLQLSDQA 418
            +F+ LA ELAAMN+KM LQLS+QA
Sbjct: 1142 VFKYLAAELAAMNIKMELQLSNQA 1165


>ref|XP_008806649.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2
            [Phoenix dactylifera]
          Length = 1177

 Score = 1645 bits (4261), Expect = 0.0
 Identities = 810/1171 (69%), Positives = 965/1171 (82%), Gaps = 6/1171 (0%)
 Frame = -3

Query: 3912 TAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYP 3733
            T  D +AL+ELF+PHI+SF++FI+ GLE  +L I+P++V DP +   LRI+ E+P++F+P
Sbjct: 6    TKPDYEALRELFRPHIDSFNYFIDEGLEKALLSIRPVEVSDPSTGGKLRIYFENPQVFHP 65

Query: 3732 MREN---VSKSR-REKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            +RE     +K R  E + P ECR+A  +Y+G F    C Q+ N+   ++   +FGH+PIM
Sbjct: 66   VREGRITTTKGRITEALYPHECRQARTTYKGEFKVTICLQY-NERQPVQTPMSFGHLPIM 124

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+S+LCHL+ A P KLI  KEEATEMGGYFIC+G+ERL RLLI+PKRNYPM  +R +FR+
Sbjct: 125  LRSRLCHLKDADPQKLIFHKEEATEMGGYFICNGLERLGRLLIVPKRNYPMGMIRSSFRS 184

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            RG GYS++AVVIRCVREDQS+VT+KLYYL NGSARLGF IRGRE LLPVGIVLKAL+DT+
Sbjct: 185  RGVGYSDKAVVIRCVREDQSSVTVKLYYLQNGSARLGFWIRGREFLLPVGIVLKALIDTS 244

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EI+ SLT CY++ +++ RGA+GSQ++GERA+IIL+EVR+LSLL  SQCL+HIGEYFRP
Sbjct: 245  DREIFVSLTCCYNDRYQKQRGAVGSQIIGERAQIILEEVRDLSLLTSSQCLKHIGEYFRP 304

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            +M+  + E H  V +A+LRDY+FVHL  +HDKFNLLIFML KL+A+VD+T  PDN+DALQ
Sbjct: 305  VMDGFENEFHTTVAEAVLRDYVFVHLTRNHDKFNLLIFMLQKLYALVDQTVAPDNSDALQ 364

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            NQE+L PG +ITIY+KEK+Q+WL+KSR  L++E+  K +      +  + K +++   A+
Sbjct: 365  NQEILLPGHLITIYVKEKVQDWLNKSRRQLLDELAKKEKNLQISMVHQVAKFLNR-NAAS 423

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +G+++ESMIK GRL T SSLDL QRE MTI AERLNF RFLSHFRSVHRG+ F  MR T+
Sbjct: 424  VGRSVESMIKLGRLTTSSSLDLPQREGMTIQAERLNFYRFLSHFRSVHRGASFAKMRITS 483

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+TSTC ISSF+DS+G  KDF KI  SI  VLV
Sbjct: 484  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCCISSFYDSEGKVKDFLKIRMSIMTVLV 543

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
            G+GM PL P++ +AGPPVVL+VLLDG V+G IASS++EK VAHIR LK+++ S +P+DLE
Sbjct: 544  GVGMTPLLPKLERAGPPVVLHVLLDGCVVGSIASSKVEKAVAHIRSLKLSSLSGVPNDLE 603

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL+LGG YPGL+LFTSPSRF+RPVRNIS     N  +ELIGPFEQA+MEIRC DGG
Sbjct: 604  VGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISHSSDSNLNIELIGPFEQAFMEIRCADGG 663

Query: 1944 GGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR   FPATHEEIHPTGILSVVA+LTPWSDHNQSPRNMYQCQMAKQTMGFS+QALQFR
Sbjct: 664  DGGRRESFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSAQALQFR 723

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D K YHLQTPQSPIVRTA+YSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSV+R
Sbjct: 724  ADVKSYHLQTPQSPIVRTASYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVDR 783

Query: 1587 GLFHGHIYQVETFDLVEQR-KFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            GL  GHIYQ E+ DL +   + D+  ++F RS+ +K+    IDSDGLPY+GQ+I+P EP 
Sbjct: 784  GLCRGHIYQTESIDLTKNHDREDRVLEIFARSS-EKTMKSSIDSDGLPYIGQVIHPNEPL 842

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S +N          LKGSEP I+DYV++DGTTSK++MQKVN+     R P+IGDKFSSR
Sbjct: 843  YSSYNTLTSVTKPTRLKGSEPVIIDYVTVDGTTSKNYMQKVNIRTRRTRYPIIGDKFSSR 902

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPDIDMPFSA TGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKF+
Sbjct: 903  HGQKGVCSQLWPDIDMPFSAVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFV 962

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF NS+ +      + S +LVDELGPML SYGFNYHG+EV+YSGV GTEL CEIFIG
Sbjct: 963  DATPFQNSVSEKDEDRPSKSSTLVDELGPMLASYGFNYHGVEVLYSGVFGTELTCEIFIG 1022

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGTVD +TRQPI GRK GGGIRFGEMERDSVLAHGAAYLLH
Sbjct: 1023 PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIGGRKRGGGIRFGEMERDSVLAHGAAYLLH 1082

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLH+CSDYHIA+VCS CGS+L  S IQ QKRA R I GLPP R PK   CHACKTS+GM
Sbjct: 1083 DRLHSCSDYHIAEVCSFCGSVLTASVIQPQKRAVREIHGLPPARTPKSYTCHACKTSKGM 1142

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++F+ LA E+AAMN+KM LQLS++A
Sbjct: 1143 ETVAMPYVFKYLAAEMAAMNIKMELQLSNRA 1173


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Cucumis
            sativus]
          Length = 1173

 Score = 1645 bits (4260), Expect = 0.0
 Identities = 795/1166 (68%), Positives = 963/1166 (82%), Gaps = 3/1166 (0%)
 Frame = -3

Query: 3906 EDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMR 3727
            ED +AL+ELF+ HIESFDH +++GLET++  IKP+++ D  + K LRIWL  PEL+ P +
Sbjct: 9    EDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQK 68

Query: 3726 ENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLC 3547
            E   ++ RE +LP ECR+A +SY G+F AD CFQ+D K AVIRE+FNFG  PIMLKSKLC
Sbjct: 69   ERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEK-AVIREKFNFGQFPIMLKSKLC 127

Query: 3546 HLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYS 3367
            HLRG  P KL+S  EEA+EMGGYF+ +G+ER+ RLLI PKRNYP + VR++F +R EGY+
Sbjct: 128  HLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREGYT 187

Query: 3366 NQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYD 3187
            ++AVVIRCVREDQS+VT+KLYYL NGSARLGF ++G+E LLP+G+VLKAL+DT D EIY 
Sbjct: 188  DKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEIYA 247

Query: 3186 SLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELD 3007
            SLTSCYS+ H + +GA+G+QLVGERAKIILDEVR+L+L D  QCL HIG++F+P+M  L 
Sbjct: 248  SLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEGLG 307

Query: 3006 MESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQ 2827
             E    V  A+L+DYIFVHL +++DKFNLLIFM  KLF+++D+T+VPDN D+LQNQ+VL 
Sbjct: 308  KEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDVLL 367

Query: 2826 PGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIE 2647
            PG +IT+YLKEKL++WL K ++LL +E+ N  + F+FC+LAH+KKVMDK     +  A+E
Sbjct: 368  PGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSAVE 427

Query: 2646 SMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLP 2467
            +M+K GRL T + LDLQQR   T+ AERLNFLRF+SHFR+VHRG+ F G+RTTTVRKLLP
Sbjct: 428  NMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLP 487

Query: 2466 ESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEP 2287
            ESWGFLCPVHTPDG PCGLLNHLTSTCRI+S F+SQG  +DF KI  SI  VL+ +GM P
Sbjct: 488  ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGMIP 547

Query: 2286 LPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPL 2107
              P++ Q G P  L VLLDGR++G+I+S+E+EK VAH+RRLK+ +   IPDDLEVGYVPL
Sbjct: 548  SLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYVPL 607

Query: 2106 TLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR-S 1930
            ++ GAYPGL+LFTSPSRFVRPV+N+S+ P++N  +ELIGPFEQ +MEIRCPDGG GGR  
Sbjct: 608  SISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGRKD 667

Query: 1929 YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLY 1750
             FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS QA+++R D KLY
Sbjct: 668  EFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQKLY 727

Query: 1749 HLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGH 1570
            HLQTPQ+PIVRT+ Y+KY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERG+FHG 
Sbjct: 728  HLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ 787

Query: 1569 IYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNX 1393
            IYQ ET DL +Q  +  ++ K+F RSNID S   +ID+DGLPYVGQMI P EP+ S+++ 
Sbjct: 788  IYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIYDE 847

Query: 1392 XXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGV 1213
                     LKGSE  IVDYVS+D   +K+  QKVN+     RNP+IGDKFSSRHGQKGV
Sbjct: 848  VAGTTRTMKLKGSEAVIVDYVSVD-VKNKNNPQKVNIRFRRPRNPMIGDKFSSRHGQKGV 906

Query: 1212 CSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFA 1033
            CSQLWPD+DMPF  ATGMRPDLIINPHAFPSRMTI ML+ES+AAKGG L+G+F++ATPF 
Sbjct: 907  CSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFR 966

Query: 1032 NSI-KDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQ 856
            +S+ K   G   T+ ++LVDELG  L   GFNYHGLEV+YSGV GTEL CEIFIGPVYYQ
Sbjct: 967  SSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQ 1026

Query: 855  RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHT 676
            RLRHMVSDK+QVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS+LAHGA+YLLHDRLHT
Sbjct: 1027 RLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHT 1086

Query: 675  CSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAM 496
            CSD+HIADVCSLCGS+L +SF+Q  KRA R IGGLPPG+APK+V CHACKTS+GMETVAM
Sbjct: 1087 CSDHHIADVCSLCGSVLTSSFVQPPKRAVREIGGLPPGKAPKRVTCHACKTSKGMETVAM 1146

Query: 495  PFIFRQLAVELAAMNVKMTLQLSDQA 418
            P++F+ LA ELAAMN+KMTLQLS  A
Sbjct: 1147 PYVFKYLAAELAAMNIKMTLQLSSGA 1172


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1644 bits (4256), Expect = 0.0
 Identities = 805/1171 (68%), Positives = 966/1171 (82%), Gaps = 2/1171 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G +P   D +AL+ELFK HIESFD+ +++GL+TM+ HIKP++V D  +   LRIWL++P 
Sbjct: 6    GSVP---DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPV 62

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            L+ P +E +S++ RE +LP ECR+A +SY G+   D CFQ+ N G +IRE  NFG  PIM
Sbjct: 63   LYPPQKERISRTMREALLPFECRQAKISYSGKITIDVCFQY-NDGPIIRENVNFGQFPIM 121

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SKLC+LRGA P KL+S KEEA+EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR++F +
Sbjct: 122  LQSKLCNLRGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSD 181

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++AVVIRCVR DQS+++++LYYL NGSARLGF +RGRE LLPVGI+LKAL+DT 
Sbjct: 182  RREGYTDKAVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTT 241

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EIY +LTSCY+E +E+G+GA+G+QLVGERAKIILDE+R+LSL  R QCL++IGE+F+P
Sbjct: 242  DREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQP 301

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            +MNEL  +S+  V  A+L+D I VHL ++ DKFNLLIFML KLF+++D+T+VPDN D+LQ
Sbjct: 302  VMNELKNDSYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQ 361

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            N EVL PG +IT+YLKEKL++WL K R LL++E+  K ++FDF ++  +KKVMDK  P  
Sbjct: 362  NHEVLLPGHLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQ 421

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +  A+E+M+K GRL T + LDLQQR   T+ AERLNFLRFLSHFR+VHRG+ F G+RTTT
Sbjct: 422  VSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTT 481

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T T RI+SFFDSQGN KD+ KI  SI +VL+
Sbjct: 482  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLL 541

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
             +GM P  P++   GPP  L VLLDG V+G IASSE+EK VAHIR LK+++ + IPDD+E
Sbjct: 542  EVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDME 601

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL++GGAYPGL+L TSPSRFVRPVRNIS+    +  +ELIGPFEQ +MEIRCPDGG
Sbjct: 602  VGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGG 661

Query: 1944 GGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR S FPATHEEIHPT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R
Sbjct: 662  DGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHR 721

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT+ Y+KY +DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
Sbjct: 722  ADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 781

Query: 1587 GLFHGHIYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            G+FHG IYQ ET DL EQ  + D++ ++F +SNI+KS    IDSDGLP+VGQMI P EP+
Sbjct: 782  GMFHGQIYQTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPY 841

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S++N           KGSE   VDYV+ D   +K  +QKVN+     RNPVIGDKFSSR
Sbjct: 842  CSIYNEVTSSIHTLKRKGSEAVYVDYVAAD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSR 900

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+F+
Sbjct: 901  HGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV 960

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF +S+    G S + S SLVD+LG +L   GFNYHGLEV+YSGV GTEL CEIFIG
Sbjct: 961  DATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIG 1020

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGT+D VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLH
Sbjct: 1021 PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH 1080

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLHTCSDYHIADVCSLCGS+LAT+FIQ QKR  R IGGLPPGRAPKKV CHAC+TS+GM
Sbjct: 1081 DRLHTCSDYHIADVCSLCGSMLATTFIQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGM 1140

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++FR LA ELAAMN+KMTL+LSD A
Sbjct: 1141 ETVAMPYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1637 bits (4238), Expect = 0.0
 Identities = 801/1166 (68%), Positives = 967/1166 (82%), Gaps = 4/1166 (0%)
 Frame = -3

Query: 3903 DLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMRE 3724
            D + L+EL + HIESFD+ ++ GL  M  H+K + V D  + K L+I + +PE+F P +E
Sbjct: 8    DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67

Query: 3723 NVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGA-VIRERFNFGHIPIMLKSKLC 3547
              SK+ R+ +LP ECR+A +SY G+  AD  FQ+ + G+ V+RERFNFG  P+MLK++ C
Sbjct: 68   QGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKTRRC 127

Query: 3546 HLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYS 3367
            HL+GA   KL+SLKEEA EMGGYFI +G+ER+FR +I+PK+NYPM+ VR +FR+R EGY+
Sbjct: 128  HLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREGYT 187

Query: 3366 NQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYD 3187
            ++AVVIRCVR+DQS+VTLKLYYLLNGS RLGF ++G+E LLPVGIVLKALVDT D EI++
Sbjct: 188  DKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFN 247

Query: 3186 SLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELD 3007
             LT CY E +++ +GA+GS LV ER KIIL EV++LSL  R QCLQHIGE+F+P+++ L 
Sbjct: 248  HLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQ 307

Query: 3006 MESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQ 2827
             ES++AV + ++RDYIFVHL D++DKFNLLIFML KLF++VD T+V DN D+LQNQE+L 
Sbjct: 308  SESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILL 367

Query: 2826 PGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIE 2647
            PG +ITIYLKEKL++WL K ++L+ +E++N G++FDF NLA+IKKVM+K     IG +IE
Sbjct: 368  PGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIE 427

Query: 2646 SMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLP 2467
            +M+K GRL T + LDLQQR   T+ AERLNFLRF+S FR+VHRG+ F G+RTT+VRKLLP
Sbjct: 428  TMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLP 487

Query: 2466 ESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEP 2287
            ESWGFLCPVHTPDG PCGLLNH+TSTCR++S++DS+GN +DFSK+  SI  VL+G+GM P
Sbjct: 488  ESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIP 547

Query: 2286 LPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPL 2107
              P++ ++GPP VL VLLDGRV+G I SSEIEK VAH+RRLK++A+S IPDDLEVGYVPL
Sbjct: 548  SLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPL 607

Query: 2106 TLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGG-RS 1930
            +LGGAYPGL+LFTSP +FVRPVRNISLP +E+  +ELIGPFEQ +MEIRCPDGG GG R+
Sbjct: 608  SLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRN 667

Query: 1929 YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLY 1750
             FPATHEEIHPTG+LSVVA+LTP+SDHNQSPRNMYQCQMAKQTMGFS QAL+FR D KLY
Sbjct: 668  AFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLY 727

Query: 1749 HLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGH 1570
            HLQTPQ+PIVRT  Y+KY +DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSV+RG+ HG 
Sbjct: 728  HLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQ 787

Query: 1569 IYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNX 1393
            IYQ ET DL +   K D+  KLF R+   KS + +IDSDGLPYVGQMI+PGEP+ S+++ 
Sbjct: 788  IYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDK 847

Query: 1392 XXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGV 1213
                    + KGSE   VDYV++D   SK+  QK N+     RNP+IGDKFSSRHGQKGV
Sbjct: 848  TTNSWRTNSRKGSESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQKGV 907

Query: 1212 CSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFA 1033
            CSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKFMDATPFA
Sbjct: 908  CSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFA 967

Query: 1032 NSIKDAYGRSTTD-SDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQ 856
            NS+K   G + TD S SLVDELG ML + GFNYHG+EV+YSGV GTEL CEIFIGPVYYQ
Sbjct: 968  NSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1027

Query: 855  RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHT 676
            RLRHMVSDKFQVRSTGT+D +TRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLHDRLHT
Sbjct: 1028 RLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHT 1087

Query: 675  CSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAM 496
            CSDYH+ADVCSLCGS+L  +FI  QKRA R IGGLPP RAPKKV CHAC+TS+GMETVAM
Sbjct: 1088 CSDYHVADVCSLCGSVLTATFIHPQKRAIREIGGLPPARAPKKVTCHACQTSKGMETVAM 1147

Query: 495  PFIFRQLAVELAAMNVKMTLQLSDQA 418
            P++FR LA ELAAMN+K+TLQL D A
Sbjct: 1148 PYVFRYLAAELAAMNIKITLQLGDGA 1173


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1637 bits (4238), Expect = 0.0
 Identities = 797/1171 (68%), Positives = 965/1171 (82%), Gaps = 2/1171 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G IP   D +AL+ELFK HIESFD+  ++GLETM+ HIKP++V D  +   LRIWL++P 
Sbjct: 6    GSIP---DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPV 62

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            L+ P +E +S++ RE +LP ECR+A +SY G+   D CFQ+ N G +IRE  NFG  PIM
Sbjct: 63   LYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQY-NDGPIIRENINFGQFPIM 121

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SKLC+LRGA P KL+S +EEA+EMGGYFI +G+ER+ RLLI+PKRN+PM+ VR++F +
Sbjct: 122  LQSKLCNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSD 181

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++A+VIRCVR DQS+++++LYYL NGSARLGF +RGRE LLPVGI+LKAL+DT 
Sbjct: 182  RREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTT 241

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EIY +LTSCY+E +E+G+GA+G+QLVGERAKIILDE+R+LSL  R QCL++IGE+F+P
Sbjct: 242  DREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQP 301

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            ++ EL  +S+  V +A+L+D I VHL ++ DKFNLLIFML KLF+++D+T+VPDN D+LQ
Sbjct: 302  VITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQ 361

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            N EVL PG +IT+YLKEKL++WL K + LL++E+  K ++FDF ++  +KKVMDK  P  
Sbjct: 362  NHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQ 421

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +  A+E+M+K GRL T + LDLQQR   T+ AERLNFLRF+SHFR+VHRG+ F G+RTTT
Sbjct: 422  VSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTT 481

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T T RI+SFFDSQGN KD+ KI  SI +VL+
Sbjct: 482  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLL 541

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
             +GM P  P++   GPP  L VLLDG V+G IASSE EK VAHIR LK+++++ IPDD+E
Sbjct: 542  EVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDME 601

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL++GGAYPGL+L TSPSRFVRPVRNIS+P   +  +E IGPFEQ +MEIRCPDGG
Sbjct: 602  VGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGG 661

Query: 1944 GGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR S FPATHEEIHPT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R
Sbjct: 662  DGGRKSSFPATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHR 721

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT+ Y+KY +DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
Sbjct: 722  ADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 781

Query: 1587 GLFHGHIYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            G+FHG IYQ ET DL EQ  + D++ ++F +SN++KS    IDSDGLP+VGQMI P EP+
Sbjct: 782  GMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPY 841

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S++N           KGSE   VDYV++D   +K  +QKVN+     RNPVIGDKFSSR
Sbjct: 842  CSIYNEVTSSIHTLKRKGSEAVYVDYVAVD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSR 900

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+F+
Sbjct: 901  HGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV 960

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF +S+K   G S + S S+VD+LG +L   GFNYHGLEV+YSGV GTEL CEIFIG
Sbjct: 961  DATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIG 1020

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGT+D VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLH
Sbjct: 1021 PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH 1080

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLHTCSDYHIADVCSLCGS+L T+F Q QKR  R IGGLPPGRAPKKV CHAC+TS+GM
Sbjct: 1081 DRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGM 1140

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++FR LA ELAAMN+KMTL+LSD A
Sbjct: 1141 ETVAMPYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1634 bits (4232), Expect = 0.0
 Identities = 802/1176 (68%), Positives = 967/1176 (82%), Gaps = 7/1176 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G +P   D +AL+ELFK HIESFDH +++GLET +LHIKP++VLD  +   LRIWLE+P 
Sbjct: 6    GSVP---DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPV 62

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            ++ P +E +SK+ RE +LP ECR+A +SY G+   D CFQ+ N G VIRE  NFG  PIM
Sbjct: 63   VYPPQKERISKTMREALLPFECRQAKISYAGKITIDVCFQY-NDGPVIRENVNFGQFPIM 121

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SKLC+LRGA P KL+S KEEA+EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR +F +
Sbjct: 122  LQSKLCNLRGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCD 181

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++AVVIRCVR DQS+++++LYYL NGSARLGF +RGRE LLPVGIVLKAL+DT 
Sbjct: 182  RREGYTDKAVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTT 241

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EIY +LTSCY+E + +G+GA+G+QLVGERAKIILDE+R+LSL  R QCL++IGE+F+P
Sbjct: 242  DREIYVNLTSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQP 301

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            IM EL  +S+  V  A+L+D I VHL +D DKFNLLIFML KLF+++D+T+VPDN D+LQ
Sbjct: 302  IMPELMKDSYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQ 361

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            N EVL PG +I++Y+KEKL++WL K ++LLM+E++ K  +FDF ++A +KK+MDK     
Sbjct: 362  NHEVLLPGHLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKL 421

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +  ++E+++K GRL T + LDLQQR   T+ AERLNFLRF+SHFR+VHRG+ F G+RTTT
Sbjct: 422  VSASVENLLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTT 481

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T TCRI+SFFDSQGN KD+ KI KSI+D+L+
Sbjct: 482  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILM 541

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
             +GM    P++   GPP  L VLLDG V+G IASSE+EK VA+IR LK++++S IP D+E
Sbjct: 542  EVGMTSSLPKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDME 601

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL++GGAYPGL+LFTSPSRFVRPV+NIS+P   +  +ELIGPFEQ +MEIRC DGG
Sbjct: 602  VGYVPLSMGGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGG 661

Query: 1944 GGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR S FPATHEEIHPT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FSSQ +Q R
Sbjct: 662  DGGRKSSFPATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHR 721

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT+ Y+KY +DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
Sbjct: 722  ADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 781

Query: 1587 GLFHGHIYQVETFDLVEQR-KFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            G+FHG IYQ ET DL EQR K D++ ++F +SN++K     IDSDGLP+VGQMI P EP+
Sbjct: 782  GMFHGQIYQTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPY 841

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S++N           KGSE   VDYV++D   +K  +QKVN+     RNPVIGDKFSSR
Sbjct: 842  CSIYNEVTSSTQTYKRKGSEAVYVDYVAVD-VKNKKHIQKVNIRFRHPRNPVIGDKFSSR 900

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+F+
Sbjct: 901  HGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV 960

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF +S K     S + S SLVD+LG +L   GFNYHGLEV+YSGV GTEL CEIFIG
Sbjct: 961  DATPFRSSTKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIG 1020

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGT+D VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLH
Sbjct: 1021 PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH 1080

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAP-----KKVICHACK 526
            DRLHTCSDYHIADVCSLCGS+L+T+FIQ QKR  R IGGLPPGR P     KKV CHAC+
Sbjct: 1081 DRLHTCSDYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQ 1140

Query: 525  TSRGMETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            TS+GMETVAMP++FR LA ELAAMN+KMTL+L+D A
Sbjct: 1141 TSKGMETVAMPYVFRYLAAELAAMNIKMTLKLNDGA 1176


>gb|KHN35264.1| DNA-directed RNA polymerase I subunit RPA2 [Glycine soja]
          Length = 1175

 Score = 1634 bits (4230), Expect = 0.0
 Identities = 796/1171 (67%), Positives = 964/1171 (82%), Gaps = 2/1171 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G IP   D +AL+ELFK HIESFD+  ++GLETM+ HIKP++V D  +   LRIWL++P 
Sbjct: 6    GSIP---DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPV 62

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            L+ P +E +S++ RE +LP ECR+A +SY G+   D CFQ+ N G +IRE  NFG  PIM
Sbjct: 63   LYPPQKERISRTMREALLPFECRQAKISYAGKITIDVCFQY-NDGPIIRENINFGQFPIM 121

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SKLC+LRGA P KL+S +EEA+EMGGYFI +G+ER+ RLLI+PKRN+PM+ VR++F +
Sbjct: 122  LQSKLCNLRGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSD 181

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++A+VIRCVR DQS+++++LYYL NGSARLGF +RGRE LLPVGI+LKAL+DT 
Sbjct: 182  RREGYTDKAIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTT 241

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EIY +LTSCY+E +E+G+GA+G+QLVGERAKIILDE+R+LSL  R QCL++IGE+F+P
Sbjct: 242  DREIYVNLTSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQP 301

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            ++ EL  +S+  V +A+L+D I VHL ++ DKFNLLIFML KLF+++D+T+VPDN D+LQ
Sbjct: 302  VITELKNDSYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQ 361

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            N EVL PG +IT+YLKEKL++WL K + LL++E+  K ++FDF ++  +KKVMDK  P  
Sbjct: 362  NHEVLLPGHLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQ 421

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +  A+E+M+K GRL T + LDLQQR   T+ AERLNFLRF+SHFR+VHRG+ F G+RTTT
Sbjct: 422  VSTAVENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTT 481

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T T RI+SFFDSQGN KD+ KI  SI +VL+
Sbjct: 482  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLL 541

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
             +GM P  P++   GPP  L VLLDG V+G IASSE EK VAHIR LK+++++ IPDD+E
Sbjct: 542  EVGMTPSLPKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDME 601

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL++GGAYPGL+L TSPSRFVRPVRNIS+P   +  +E IGPFEQ +MEIRCPDGG
Sbjct: 602  VGYVPLSMGGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGG 661

Query: 1944 GGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGR S FPATHEEIHPT +LSVVA+LTPWSD NQSPRNMYQCQMAKQTM FSSQ +Q R
Sbjct: 662  DGGRKSSFPATHEEIHPTVMLSVVANLTPWSDQNQSPRNMYQCQMAKQTMAFSSQTIQHR 721

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT+ Y+KY +DEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER
Sbjct: 722  ADQKLYHLQTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 781

Query: 1587 GLFHGHIYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            G+FHG IYQ ET DL EQ  + D++ ++F +SN++KS    IDSDGLP+VGQMI P EP+
Sbjct: 782  GMFHGQIYQTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPY 841

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S++N           KGSE   VDYV++D   +K  +QKVN+     RNPVIGDKFSSR
Sbjct: 842  CSIYNEVTSSIHTLKRKGSEAVYVDYVAVD-VKNKKHLQKVNIRFRHPRNPVIGDKFSSR 900

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+F+
Sbjct: 901  HGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFV 960

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF +S+K   G S + S S+VD+LG +L   GFNYHGLEV+YSGV GTEL CEIFIG
Sbjct: 961  DATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIG 1020

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTGT+D VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLH
Sbjct: 1021 PVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLH 1080

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLHTCSDYHIADVCSLCGS+L T+F Q QKR  R IGGLPPGRAPKKV CHAC+TS+GM
Sbjct: 1081 DRLHTCSDYHIADVCSLCGSMLTTTFTQPQKRPVREIGGLPPGRAPKKVTCHACQTSKGM 1140

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++FR LA ELAAMN+KMTL+LSD A
Sbjct: 1141 ETVAMPYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1632 bits (4225), Expect = 0.0
 Identities = 791/1171 (67%), Positives = 952/1171 (81%), Gaps = 2/1171 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G    AE+L+ L+ELFK HIESFD+ I+ GL+ M+  +KP+Q+ D  S K LRIWL+HPE
Sbjct: 10   GPFSDAEELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPE 69

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            ++ P ++  SK+    + P ECR+A +SY G F  D CFQWD  G V+RE+ NFG  PIM
Sbjct: 70   VYPPQKDRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDG-GVVVREKLNFGEFPIM 128

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            LKSK C+LR A P KL++ KEE+ EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR++FR+
Sbjct: 129  LKSKRCYLREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRD 188

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++AVVIRCVR D S+VT+KLYYL NGSARLGF ++GRE +LPVGI+LKAL+DT 
Sbjct: 189  RREGYTDKAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTN 248

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D+EIY  LT CY+E +  G+GA+G+QLVGERAKIILDEV+ L+L  + QCLQHIGE+F+P
Sbjct: 249  DREIYTKLTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQP 308

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            IM  ++ ES+  V   +LR+YIFVHL D++DKFNLLIFM+ KLF+++D+T+ PDN+D+LQ
Sbjct: 309  IMEGMESESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQ 368

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            NQEVL PG +ITIYLKEKL++WL K ++L+ + + NK + FDFC++  +KKVM+K  P  
Sbjct: 369  NQEVLLPGHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQ 428

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            +  AIE+++K GRL T + LDLQQR   T+ AERLN+ RFLS FR VHRG+ F G+RTT+
Sbjct: 429  VSAAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTS 488

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T TCRI+S+++S GN +DF KI  SI DVLV
Sbjct: 489  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLV 548

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
            G+GM    P+V  AGPP VL VLLDGRV+G + S E EK VAH+RRLK+AA+S IPDDLE
Sbjct: 549  GVGMTTSWPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLE 608

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL+LGG YPGL+LFTSPSRFVRPVRNIS+P  +   +ELIGPFEQ +MEIRCPDGG
Sbjct: 609  VGYVPLSLGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGG 668

Query: 1944 GGGRS-YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGRS  FPATHEEI PT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS QA+  R
Sbjct: 669  NGGRSNIFPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINAR 728

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT  Y+KYCMDE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVER
Sbjct: 729  ADQKLYHLQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVER 788

Query: 1587 GLFHGHIYQVETFDLVEQR-KFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPF 1411
            G+ HG IYQ ET DL + + K D+  ++F R + D+S +  +DSDGLP+VGQ+I P EP+
Sbjct: 789  GMCHGQIYQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPY 848

Query: 1410 ISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSR 1231
             S  N           KGSE  IVDYV++D T SK  +QK N+     RNPVIGDKFSSR
Sbjct: 849  CSTINQVTNSKRLYNHKGSETVIVDYVAVD-TKSKKHLQKANIRFRHPRNPVIGDKFSSR 907

Query: 1230 HGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFM 1051
            HGQKGVCSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF+
Sbjct: 908  HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 967

Query: 1050 DATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            DATPF++S+K+A G++  +S+SLVDELG ML + GFNYHG+EV+YSGV GTEL CEIFIG
Sbjct: 968  DATPFSDSVKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIG 1027

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDK+QVR+TG VD +TRQPIKGRK GGGIRFGEMERD++LAHGAAYLLH
Sbjct: 1028 PVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLH 1087

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLHTCSDYHIADVCSLCGSIL TS +Q  KR  R IGGLPP RAPKKV CHAC+TS+GM
Sbjct: 1088 DRLHTCSDYHIADVCSLCGSILTTSIVQPPKRVVREIGGLPPARAPKKVTCHACQTSKGM 1147

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            ETVAMP++FR LA ELAAMN+ MT+QL+  A
Sbjct: 1148 ETVAMPYVFRYLAAELAAMNITMTIQLNSGA 1178


>emb|CDP07938.1| unnamed protein product [Coffea canephora]
          Length = 1209

 Score = 1623 bits (4203), Expect = 0.0
 Identities = 805/1184 (67%), Positives = 952/1184 (80%), Gaps = 21/1184 (1%)
 Frame = -3

Query: 3906 EDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILR------------- 3766
            +D  AL+ELF+ HIESFDH +E G+ETM+L+IKP+QV  P+S + LR             
Sbjct: 27   KDYSALEELFRHHIESFDHMVEYGIETMLLNIKPVQVFHPLSNQKLRNILFYHLITAWFG 86

Query: 3765 ------IWLEHPELFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAV 3604
                  +W   PE+F P  E   ++ ++ + P ECR+A +SY G F  D CFQ+ + GAV
Sbjct: 87   SLTDTILWFGKPEIFPPQTERQLRTMKDALYPFECRQARISYTGTFMMDICFQYGD-GAV 145

Query: 3603 IRERFNFGHIPIMLKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKR 3424
            IRE+FNFG  PIMLKSKLC+LR   P KL+SLKEE +EMGGYFI +G+ER+ RLLI+PKR
Sbjct: 146  IREKFNFGQFPIMLKSKLCYLRNLPPKKLVSLKEEQSEMGGYFILNGLERVVRLLILPKR 205

Query: 3423 NYPMAFVRDTFRNRGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILL 3244
            NYP + VR++FR R EGY+++AVVIRCVREDQSAV+L+LYYL NGSARL F I+GRE +L
Sbjct: 206  NYPTSMVRNSFRERREGYTDKAVVIRCVREDQSAVSLRLYYLSNGSARLAFWIQGREYML 265

Query: 3243 PVGIVLKALVDTADKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDR 3064
            PVG++LKAL DT D EI+  LTSCY + ++  +G++GSQLVGERAKIILDEV++LSL   
Sbjct: 266  PVGVMLKALADTTDHEIFACLTSCYDDNYDCVKGSVGSQLVGERAKIILDEVQDLSLFTH 325

Query: 3063 SQCLQHIGEYFRPIMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMV 2884
             QCLQHIGE+F+P+M  L+ ES   V  A+L+DYIFVHL ++HDKFNLLIFM+ KLF++V
Sbjct: 326  KQCLQHIGEHFQPVMIGLENESPSVVAAAVLKDYIFVHLDNNHDKFNLLIFMVQKLFSLV 385

Query: 2883 DRTAVPDNADALQNQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLA 2704
            D T++PDN D+LQN EVL PG +ITIYLKEKLQEWL K++ LL +E  N   +FD  +LA
Sbjct: 386  DHTSMPDNPDSLQNHEVLLPGHLITIYLKEKLQEWLLKTKNLLQDEA-NSSNKFDINSLA 444

Query: 2703 HIKKVMDKCYPATIGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSV 2524
             IKK+++K  P  I  AI++M+K G L T S LDLQQR  MT+ AERLNFLRFLSHFR+V
Sbjct: 445  DIKKLIEKNSPKQISSAIDNMLKTGTLLTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAV 504

Query: 2523 HRGSFFTGMRTTTVRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKD 2344
            HRGS F G+RTTTVRKLLPESWGFLCPVHTPDG PCGLLNH++S+CRI+S++D++GN +D
Sbjct: 505  HRGSSFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMSSSCRITSYYDNKGNVRD 564

Query: 2343 FSKIHKSIKDVLVGMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRL 2164
            F K   SI  VLVG+GM P  P++ QAGPP VL VLLDGRV+G I S  +EK V H+RRL
Sbjct: 565  FLKTRMSILSVLVGVGMTPSLPKLVQAGPPKVLSVLLDGRVVGSIPSDLVEKAVTHMRRL 624

Query: 2163 KIAASSKIPDDLEVGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPF 1984
            K++A+++IP+DLEVGYVPL++ GAYPGLFLFTSPSRFVRPVRNIS+PP+E    ELIGPF
Sbjct: 625  KLSATAQIPEDLEVGYVPLSMCGAYPGLFLFTSPSRFVRPVRNISIPPEEGNKFELIGPF 684

Query: 1983 EQAYMEIRCPDGGGGGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAK 1807
            EQ YMEI CPDGGGGGR S FPATHEEIHPTGILSVVA+LTPWSDHNQSPRNMYQCQM K
Sbjct: 685  EQVYMEISCPDGGGGGRKSMFPATHEEIHPTGILSVVANLTPWSDHNQSPRNMYQCQMGK 744

Query: 1806 QTMGFSSQALQFRTDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDM 1627
            QTMGF SQAL  R D KLYHLQTPQ+PIVRT AY KY +DEFP GTNAIVAVLAY+GYDM
Sbjct: 745  QTMGFPSQALHSRADQKLYHLQTPQTPIVRTKAYEKYHIDEFPLGTNAIVAVLAYSGYDM 804

Query: 1626 EDAMILNKSSVERGLFHGHIYQVETFDLVEQRKFD-QAFKLFGRSNIDKSKNDLIDSDGL 1450
            EDAM+LNKSSVERG+FHGHIYQ ET DL EQR       ++F RSN+DKS   L+DSDGL
Sbjct: 805  EDAMVLNKSSVERGMFHGHIYQTETIDLTEQRSNSGHGQRIFRRSNLDKSSQHLVDSDGL 864

Query: 1449 PYVGQMINPGEPFISVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXX 1270
            PYVGQ I P EP+ S++N          LKGSE  +VDYV++D   +K+ +QKVN+    
Sbjct: 865  PYVGQRIKPNEPYCSIYNEITSSTSSTKLKGSESVVVDYVAVD-VKNKNNLQKVNIRFRR 923

Query: 1269 XRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLES 1090
             RNP+IGDKFSSRHGQKGVCSQLWPDIDMPF+  TGMRPDLIINPHAFPSRMTIGMLLES
Sbjct: 924  PRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFAGLTGMRPDLIINPHAFPSRMTIGMLLES 983

Query: 1089 IAAKGGSLHGKFMDATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSG 910
            IAAKGG+LHGKFMDATPF + +K       ++S SLVDELG MLT+YGFNYHG EV+YSG
Sbjct: 984  IAAKGGALHGKFMDATPFTSLLKKGNEGQESESSSLVDELGSMLTAYGFNYHGSEVLYSG 1043

Query: 909  VLGTELACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMER 730
            V GTEL CEIFIGPVYYQRLRHMVSDKFQVRSTGTVD +TRQPIKGRK GGGIRFGEMER
Sbjct: 1044 VYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMER 1103

Query: 729  DSVLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPK 550
            DS+LAHGAAYLLHDRLH  SD+H+ADVCS+CGS+L TS I  ++RA R I GLPPGR PK
Sbjct: 1104 DSLLAHGAAYLLHDRLHISSDHHVADVCSICGSLLTTSLIPTKQRAIREIIGLPPGRIPK 1163

Query: 549  KVICHACKTSRGMETVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            KV+C AC+TS+GMETVAMP++FR LA ELAAMN+KMTLQLS  A
Sbjct: 1164 KVMCVACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLQLSSGA 1207


>ref|XP_009355260.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1
            [Pyrus x bretschneideri] gi|694328960|ref|XP_009355261.1|
            PREDICTED: DNA-directed RNA polymerase I subunit RPA2
            isoform X2 [Pyrus x bretschneideri]
          Length = 1179

 Score = 1622 bits (4201), Expect = 0.0
 Identities = 799/1170 (68%), Positives = 958/1170 (81%), Gaps = 2/1170 (0%)
 Frame = -3

Query: 3921 RIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPEL 3742
            ++   ED  A++ELF+ HIESFD+ +  GLE ++  IKP++++DP +   L IWL  P L
Sbjct: 17   QLAAGEDFAAVRELFRHHIESFDYLVTKGLEVLLSKIKPIEIVDPSTNNTLTIWLGDPAL 76

Query: 3741 FYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIML 3562
            + P +E  SK  +  +LP ECR+A LSY G+F A+ CF++++ GAVIRE+FNFG +PIML
Sbjct: 77   YRPYKEE-SKMMQVPLLPFECRQAKLSYTGKFMAEVCFKYNDSGAVIREKFNFGQLPIML 135

Query: 3561 KSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNR 3382
            +SKLCHLRGA+P KL+S KEEA+EMGGYFI +G+ER+ RL+I+PKRNYP + VR++FR+R
Sbjct: 136  QSKLCHLRGATPQKLVSYKEEASEMGGYFILNGLERVVRLVILPKRNYPTSMVRNSFRDR 195

Query: 3381 GEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTAD 3202
             EGY+++AVVIRC REDQS+VT+KLYYL NGSARLGF I+GRE LLPVG+VLKAL+DT D
Sbjct: 196  KEGYTDKAVVIRCEREDQSSVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTD 255

Query: 3201 KEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPI 3022
            +EIY+ LT CY E +E+G+GA+G+QLVGERA+IILDEVR+L L  R +CL+HIGE+FRP+
Sbjct: 256  REIYECLTCCYVENYEKGKGAVGTQLVGERAQIILDEVRDLKLFTRHECLEHIGEHFRPL 315

Query: 3021 MNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQN 2842
            M  L+ E    VG A++ +YI VHL   HDKFNLLIFM+ KLF++VD+T+VPDN D+LQN
Sbjct: 316  MGGLENERPSVVGDAVIMNYILVHLNKAHDKFNLLIFMVQKLFSLVDQTSVPDNPDSLQN 375

Query: 2841 QEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATI 2662
             EVL PG +ITIY+KEKL+EWL ++++L+ +E+ NK + F+F N+A +KK+MDK     I
Sbjct: 376  HEVLLPGHLITIYIKEKLEEWLQRTKKLIEDEI-NKNKDFEFGNIAKVKKLMDKNPAKQI 434

Query: 2661 GKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTV 2482
              A+E+M+K GRLNT S LDLQQR  +T+ AERLN+LRF+SHFR+VHRG+ F G+RTT+V
Sbjct: 435  SLAVENMLKTGRLNTQSGLDLQQRAGLTVQAERLNYLRFISHFRAVHRGASFAGLRTTSV 494

Query: 2481 RKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVG 2302
            RKLLPESWGFLCPVHTPDG PCGLLNH+T  CRI+SFFD+QGN +DFSKI +SI  VL  
Sbjct: 495  RKLLPESWGFLCPVHTPDGEPCGLLNHMTHICRITSFFDAQGNIRDFSKIRESILSVLSA 554

Query: 2301 MGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEV 2122
            +GM+   P + QAGPP    VLLDG V+G I+SS++EK VAH+RRLK+AA+  IPDDLEV
Sbjct: 555  VGMKTSKPNLVQAGPPAAFSVLLDGCVVGSISSSKVEKVVAHLRRLKVAAAPVIPDDLEV 614

Query: 2121 GYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGG 1942
            GYVPL++GGAYPGL+LFT PSRFVRPV+NIS+P  E   +ELIGPFEQ +MEIRCPDG  
Sbjct: 615  GYVPLSMGGAYPGLYLFTIPSRFVRPVKNISIPSVEGQNIELIGPFEQVFMEIRCPDGRD 674

Query: 1941 GGR-SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRT 1765
            GGR   FPATHEEIHPTG+LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS Q L  R 
Sbjct: 675  GGRKDGFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQGLCNRA 734

Query: 1764 DNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERG 1585
            D KLYHLQTPQSPIVRT+AY KYC+DE+PTGTNAIVAVL+YTGYDMEDAMILNKSSVERG
Sbjct: 735  DQKLYHLQTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDMEDAMILNKSSVERG 794

Query: 1584 LFHGHIYQVETFDLVEQRK-FDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFI 1408
            +FHGHIYQ ET DL +Q+K  D     F +SN+D  KN LIDSDGLP+VGQ I P E + 
Sbjct: 795  MFHGHIYQTETIDLSDQKKRSDNTPTYFKKSNVD--KNPLIDSDGLPHVGQTIKPYEEYY 852

Query: 1407 SVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRH 1228
            S  N           KG+EP IVDYV+IDG   K  +QK N+     RNP+IGDKFSSRH
Sbjct: 853  SFTNDTLHKPRAVKRKGTEPVIVDYVAIDG---KKLLQKANIRFRHTRNPIIGDKFSSRH 909

Query: 1227 GQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMD 1048
            GQKGVCSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGK++D
Sbjct: 910  GQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVD 969

Query: 1047 ATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGP 868
            ATPFA+S K+A G +   S +LVDELG ML   GFNYHG+EV+YSGV GTEL CEIFIGP
Sbjct: 970  ATPFASS-KNANGETGPKSKTLVDELGEMLKVKGFNYHGVEVLYSGVYGTELTCEIFIGP 1028

Query: 867  VYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHD 688
            VYYQRLRHMVSDKFQVRSTGTVD VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLHD
Sbjct: 1029 VYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHD 1088

Query: 687  RLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGME 508
            RLHTCSDYHIADVCS+CGSIL ++FIQ  KR  R + G+P  RAPKKVICHACKTS+GME
Sbjct: 1089 RLHTCSDYHIADVCSICGSILTSTFIQ-PKRVGRAVSGIPSVRAPKKVICHACKTSKGME 1147

Query: 507  TVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            TVAMP++FR LA ELA+MN+KMTLQ+S+ A
Sbjct: 1148 TVAMPYVFRYLAAELASMNIKMTLQVSNAA 1177


>ref|XP_004486057.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cicer
            arietinum] gi|502078798|ref|XP_004486058.1| PREDICTED:
            DNA-directed RNA polymerase I subunit RPA2-like [Cicer
            arietinum]
          Length = 1177

 Score = 1622 bits (4199), Expect = 0.0
 Identities = 797/1162 (68%), Positives = 954/1162 (82%), Gaps = 2/1162 (0%)
 Frame = -3

Query: 3903 DLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMRE 3724
            + DAL++L KPHIESFDH I++GL+TM + IKPL+V  P     L+I +++P++F P +E
Sbjct: 16   NFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKE 75

Query: 3723 NVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLCH 3544
                  R  + P ECR+A +SY G F A+ CFQ+DN G ++RE+FNFG  PIML+SKLC+
Sbjct: 76   RGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDN-GPIVREKFNFGQFPIMLQSKLCN 134

Query: 3543 LRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYSN 3364
            LRGASP KL+S KEEA+E+GGYFI +G+ER+ RLLIMPKRNYPM+ VR +F  R EGY++
Sbjct: 135  LRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYTD 194

Query: 3363 QAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIYDS 3184
            +AVVIRCVR DQ++V++KLYYL NGSARLGF I GRE +LPVGIVLKAL+DT D+EIY +
Sbjct: 195  KAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYVN 254

Query: 3183 LTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNELDM 3004
            LTSCY+E +E+G+GA+G+QLVGERAKIILDEVR+LSL  R QCLQ+IGE+F+PI+  L  
Sbjct: 255  LTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLKN 314

Query: 3003 ESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVLQP 2824
            ESH  V  A+LRDYI VHL ++ DKFNLLIFML KLF+++D+T+VPDN D+LQNQEVL P
Sbjct: 315  ESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLLP 374

Query: 2823 GLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAIES 2644
            G +IT+YLKEKL+EWL K + LL++E++ KG  F+F  +A +KKV++K +   I  AIE+
Sbjct: 375  GHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIEN 434

Query: 2643 MIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLLPE 2464
            M+K GRL T + LDL QR   T+ AER+NFLRF+SHFR+VHRGS F G+RTTTVRKLLPE
Sbjct: 435  MLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLPE 494

Query: 2463 SWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGMEPL 2284
            SWGFLCPVHTPDG PCGLLNH+T TCR++SF+DS+GN KD+ KI  SI ++LV +GM   
Sbjct: 495  SWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQS 554

Query: 2283 PPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVPLT 2104
             P++   GPP VL VLLDG ++GFI S+E+EK VAHIR LK+++++ IP+D+EVGYVPL+
Sbjct: 555  LPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPLS 614

Query: 2103 LGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR-SY 1927
            +GGAYPGL+LFTSPSRFVRPVRN+S+ P  N  VELIGPFEQ +MEIRCPDGG GGR S 
Sbjct: 615  MGGAYPGLYLFTSPSRFVRPVRNLSI-PSTNENVELIGPFEQVFMEIRCPDGGDGGRKSP 673

Query: 1926 FPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKLYH 1747
            FPATHEEIHPTG+LSVV +LTPWSDHNQSPRNMYQCQMAKQTMGFSSQ +Q R D KLYH
Sbjct: 674  FPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLYH 733

Query: 1746 LQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHGHI 1567
            LQTPQ+PIVRT AYS+Y +DE+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERG+FHG I
Sbjct: 734  LQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQI 793

Query: 1566 YQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHNXX 1390
            YQ ET DL E+  K DQ+ ++F +S +DK     IDSDGLP+VGQMI P EP+ S +N  
Sbjct: 794  YQTETIDLTEKGGKSDQSARVFRKSKLDKPCPS-IDSDGLPHVGQMIWPDEPYCSTYNEV 852

Query: 1389 XXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKGVC 1210
                     KGSEP  VDYV++D  T K+ + KVN+     RNPVIGDKFSSRHGQKGVC
Sbjct: 853  TNKTYLFKKKGSEPVYVDYVAVDTKTKKN-LNKVNIRFRHPRNPVIGDKFSSRHGQKGVC 911

Query: 1209 SQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPFAN 1030
            SQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF DATPF +
Sbjct: 912  SQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRS 971

Query: 1029 SIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQRL 850
            S+K     S + S SLVDELG ML   GFNYHG EV+YSGV GTEL CEIFIGPVYYQRL
Sbjct: 972  SVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRL 1031

Query: 849  RHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHTCS 670
            RHMVSDK+QVRSTGT+D VTRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLHDRLHTCS
Sbjct: 1032 RHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1091

Query: 669  DYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGMETVAMPF 490
            DYHIADVCS+CGS+L T+F Q +KR  R IGGLPP RAP+KV CHAC++S+GME VAMP+
Sbjct: 1092 DYHIADVCSICGSMLTTTFQQPRKRPVREIGGLPPARAPRKVTCHACQSSKGMEKVAMPY 1151

Query: 489  IFRQLAVELAAMNVKMTLQLSD 424
            IFR LA ELAAMN+KMTL+L+D
Sbjct: 1152 IFRYLAAELAAMNIKMTLKLTD 1173


>ref|XP_012068704.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa2 isoform X1
            [Jatropha curcas]
          Length = 1179

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 793/1168 (67%), Positives = 977/1168 (83%), Gaps = 9/1168 (0%)
 Frame = -3

Query: 3903 DLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMRE 3724
            D   LQEL K HI+SFD+ +E GLE M+ +IKP+++ D  +   L+++L +P+++ P+RE
Sbjct: 14   DFRELQELAKHHIDSFDYMVERGLEVMLDNIKPVEIHDSFTNTSLKLYLSNPKVYEPVRE 73

Query: 3723 NVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLCH 3544
             + +++ +++LP ECR+A +SY G+F AD CF++  +  VIRE++NFG +PIMLKS+LCH
Sbjct: 74   AL-RTKIKRLLPFECRQAKVSYCGKFEADVCFEYRGR-PVIREKYNFGQLPIMLKSRLCH 131

Query: 3543 LRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGYSN 3364
            L GA   KL+S+KEE++EMGGYFI +G+ER+ R LIMPKRNYPM+ VR +FR+R EGY++
Sbjct: 132  LYGADSQKLVSMKEESSEMGGYFILNGLERVVRCLIMPKRNYPMSMVRGSFRDRREGYTD 191

Query: 3363 QAVVIRCVRE------DQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTAD 3202
            +AVVIRCVRE      DQS+VT+KLYYL +GSARLGF I+GRE LLPVGIVLKAL +T D
Sbjct: 192  KAVVIRCVREYQSSLTDQSSVTVKLYYLRSGSARLGFWIQGREYLLPVGIVLKALAETTD 251

Query: 3201 KEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPI 3022
             EIY+ LT C+ E +++ +GA+GSQ VGERAKIILDEVR LSL  +++CL+HIGE+F+P+
Sbjct: 252  WEIYEKLTCCFDEKYDKTKGAVGSQFVGERAKIILDEVRGLSLFTQTECLRHIGEHFQPV 311

Query: 3021 MNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQN 2842
            M+ L+ ES   V  A+L+DY+FVHL +  DKFNLLIFML KLF++VD+T+V DN D+LQN
Sbjct: 312  MDGLEKESFSNVAHAVLKDYVFVHLTNYDDKFNLLIFMLQKLFSLVDKTSVEDNPDSLQN 371

Query: 2841 QEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATI 2662
            QE+L PG +ITIYLKEKL+EWL K+++++  E++ K ++ +F +++ +KKVMDK + +++
Sbjct: 372  QEILLPGHLITIYLKEKLEEWLRKAKKVIQEEIE-KNKKLNFLSVSDVKKVMDKNHSSSV 430

Query: 2661 GKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTV 2482
              A+E+++K GRL T + LDLQQR   T+ AERLNFLRFLS FR+VHRG+ F G+RTT+V
Sbjct: 431  SLAVENLLKTGRLITQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSV 490

Query: 2481 RKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVG 2302
            RKLLPESWGFLCPVHTPDG PCGLLNH+T +CR++S+FDS G  KDF  + KSI  VL G
Sbjct: 491  RKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRVTSYFDSHGAVKDFFDMRKSILGVLTG 550

Query: 2301 MGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEV 2122
            +GM    P++ QAGPP VL VLLDGRV+G I SSE+EK VAH+RRLK++A+S IPDDLEV
Sbjct: 551  LGMISSLPKLVQAGPPQVLSVLLDGRVVGSIPSSEVEKVVAHLRRLKVSAASMIPDDLEV 610

Query: 2121 GYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGG 1942
            GY+PL++GGAYPGL+LFTSPSRF+RPVRNIS+P  ++  +ELIGPFEQ YMEIRCPDGG 
Sbjct: 611  GYIPLSMGGAYPGLYLFTSPSRFIRPVRNISIPADDSRNIELIGPFEQVYMEIRCPDGGN 670

Query: 1941 GGRS-YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRT 1765
            GGRS  FPATHEEIHPT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS Q+L+FR 
Sbjct: 671  GGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRA 730

Query: 1764 DNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERG 1585
            D KLYHLQTPQ+PIVRT+AY+KYC+DE+PTGTNAIVAVLAYTGYDMEDAMILNKSSVERG
Sbjct: 731  DQKLYHLQTPQTPIVRTSAYTKYCIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERG 790

Query: 1584 LFHGHIYQVETFDLVEQ-RKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFI 1408
            +FHG IYQ ET DL E+  K  +A K+F RSNID+S + +IDSDGLPY+GQMI+P EP+ 
Sbjct: 791  MFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSVIDSDGLPYIGQMIHPNEPYC 850

Query: 1407 SVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRH 1228
            S+++           KGS+P  VDYV++D T +K+ +QKVN+     RNP+IGDKFSSRH
Sbjct: 851  SIYDEVTNTTKTNNRKGSDPVFVDYVAVD-TKNKNNIQKVNIRFRHPRNPIIGDKFSSRH 909

Query: 1227 GQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMD 1048
            GQKGVCSQLWPDIDMPFS ATGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKF+D
Sbjct: 910  GQKGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVD 969

Query: 1047 ATPFANSIKDAY-GRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIG 871
            ATPFANS+K A  G + +DS+SLVD+LG ML S+GFNYHG+EV+YSGV GTELACEIFIG
Sbjct: 970  ATPFANSVKKAEGGDNKSDSESLVDDLGEMLRSHGFNYHGVEVLYSGVYGTELACEIFIG 1029

Query: 870  PVYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLH 691
            PVYYQRLRHMVSDKFQVRSTG VD VTRQPIKGRK GGGIRFGEMERD++LAHGAAYLLH
Sbjct: 1030 PVYYQRLRHMVSDKFQVRSTGVVDQVTRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLH 1089

Query: 690  DRLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGM 511
            DRLHTCSDYHIADVCS+CGSIL +SF+Q QKR  R IGGLPP RAPKKV CHAC+TS+GM
Sbjct: 1090 DRLHTCSDYHIADVCSICGSILTSSFVQTQKRVVRDIGGLPPVRAPKKVACHACQTSKGM 1149

Query: 510  ETVAMPFIFRQLAVELAAMNVKMTLQLS 427
            ETVAMP++FR LA ELAAMN+KMT+QLS
Sbjct: 1150 ETVAMPYVFRYLAAELAAMNIKMTVQLS 1177


>ref|XP_011087223.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Sesamum
            indicum]
          Length = 1196

 Score = 1620 bits (4195), Expect = 0.0
 Identities = 800/1165 (68%), Positives = 956/1165 (82%), Gaps = 5/1165 (0%)
 Frame = -3

Query: 3906 EDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPELFYPMR 3727
            +D +AL+ELFK HI+SFDH +E G+E M+L IKP++V D  S   LRIW E+PE++ P +
Sbjct: 29   KDYEALRELFKHHIDSFDHMVEHGIERMLLSIKPVEVFDSFSNLKLRIWFENPEIYPPQK 88

Query: 3726 ENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIMLKSKLC 3547
            E  S++  + + P ECR+A L+Y GRF  D  FQ+D+ G  +RE+ NFG  P+MLKSKLC
Sbjct: 89   ERFSRTMADALYPFECRQAKLTYAGRFMIDVKFQYDD-GVSVREKINFGQFPVMLKSKLC 147

Query: 3546 HLRGAS-PHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRNRGEGY 3370
            HLR A+ P KL+  KEE +EMGGYFI +G+ER+ RLLI+PKRNYPM+ VR++FR R EGY
Sbjct: 148  HLRAANDPKKLVRHKEEPSEMGGYFIMNGLERVIRLLILPKRNYPMSMVRNSFRERREGY 207

Query: 3369 SNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTADKEIY 3190
            S++AVVIRCVREDQSAVT+KLYYL NGSARLGF I+GRE LLPVGI++KAL+DT D EIY
Sbjct: 208  SDKAVVIRCVREDQSAVTVKLYYLNNGSARLGFWIQGREYLLPVGIIMKALIDTTDHEIY 267

Query: 3189 DSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRPIMNEL 3010
             SLT CY+E ++R +G++G+QLVGERAKIILDE++ +SL  R+QCLQHIGE+F+P+M  L
Sbjct: 268  VSLTCCYNEKYDRVKGSVGTQLVGERAKIILDELQNMSLYTRAQCLQHIGEHFQPLMAGL 327

Query: 3009 DMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQNQEVL 2830
            + ES+  V  A+LRDYIFVHL D+ DKFNLLIFML KLF++VD+T+VPDN D+LQNQEVL
Sbjct: 328  EKESYSVVADAVLRDYIFVHLDDNIDKFNLLIFMLQKLFSLVDQTSVPDNPDSLQNQEVL 387

Query: 2829 QPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPATIGKAI 2650
             PG +ITIYLKEKLQ+WL K++  L +E+ N+ ++F+  +LA +KKV++K  P  IG AI
Sbjct: 388  LPGHLITIYLKEKLQDWLLKAKRTLQDEVDNRTKKFELSSLADVKKVIEKNTPRQIGAAI 447

Query: 2649 ESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTTVRKLL 2470
            E+++K GRL T S LDLQQR  MT+ AERLNFLRFLSHFR+VHRG+ F G+RTT+VRKLL
Sbjct: 448  ENLLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 507

Query: 2469 PESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLVGMGME 2290
            PESWGFLCPVHTPDG PCGLLN++TS+CRI+S++DS+G  KDF ++ KSI  VLV +GM 
Sbjct: 508  PESWGFLCPVHTPDGEPCGLLNNMTSSCRITSYYDSKGKVKDFLEVRKSILKVLVSIGMT 567

Query: 2289 PLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLEVGYVP 2110
            P  P++ QAGPP VL VLLDGRV+G IAS  IEK V H+RRLK+AA+  IP+DLEVGY+P
Sbjct: 568  PSLPKLVQAGPPEVLPVLLDGRVVGSIASDIIEKAVCHLRRLKVAATFAIPEDLEVGYIP 627

Query: 2109 LTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGGGGGR- 1933
            L++GGAYPGL LFTS SRFVRPVRNI +PP+E   +ELIGPFEQ YMEI CPDGG GGR 
Sbjct: 628  LSMGGAYPGLHLFTSASRFVRPVRNILIPPEEGNNIELIGPFEQVYMEISCPDGGDGGRK 687

Query: 1932 SYFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFRTDNKL 1753
            + FPATHEEIHPTGILSVV +LTPWSDHNQSPRNMYQCQM KQTMGFS QAL  R D KL
Sbjct: 688  NVFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSCQALVARADQKL 747

Query: 1752 YHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGLFHG 1573
            YHLQTPQ+PIVRT  Y KY +D++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RG+  G
Sbjct: 748  YHLQTPQTPIVRTKTYEKYNIDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCRG 807

Query: 1572 HIYQVETFDLVEQR-KFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFISVHN 1396
            +IYQ ET DL EQ  + D++ + FGRSN+D+S + LIDSDGLPYVGQ I+P EP+ S++N
Sbjct: 808  YIYQTETIDLTEQNLRSDRSQRSFGRSNLDRSTHHLIDSDGLPYVGQRISPNEPYCSIYN 867

Query: 1395 XXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRHGQKG 1216
                      LKGSEP  VDYV++D   +K  +QK N+     RNP+IGDKFSSRHGQKG
Sbjct: 868  EITSKVTTNKLKGSEPVYVDYVAVD-VKNKKHIQKANIRLRHPRNPIIGDKFSSRHGQKG 926

Query: 1215 VCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMDATPF 1036
            VCSQLWPD DMPFS  TGMRPDLIINPHAFPSRMTI MLLESIAAKGG+LHG F+DATPF
Sbjct: 927  VCSQLWPDTDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGNFVDATPF 986

Query: 1035 ANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGPVYYQ 856
            ++S+K     S ++S SLVDELG ML + GFNYHG+EV+YSGV GTEL CEIFIGPVYYQ
Sbjct: 987  SSSMKKNSVGSESESSSLVDELGSMLIARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1046

Query: 855  RLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHDRLHT 676
            RLRHMVSDKFQVRSTGTVD VTRQPIKGRK GGG+RFGEMERDS+LAHGAAYLLHDRLHT
Sbjct: 1047 RLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLHT 1106

Query: 675  CSDYHIADVCSLCGSILATSFIQHQKRATRHIGG--LPPGRAPKKVICHACKTSRGMETV 502
             SD+HIADVCSLCGSIL TS IQ QK+A R + G  LPPGRAPKKV C AC+TS GMETV
Sbjct: 1107 SSDHHIADVCSLCGSILTTSLIQSQKKAVRDMIGRDLPPGRAPKKVTCVACQTSTGMETV 1166

Query: 501  AMPFIFRQLAVELAAMNVKMTLQLS 427
            AMP++FR LA ELAAMN+KM LQLS
Sbjct: 1167 AMPYVFRYLAAELAAMNIKMALQLS 1191


>ref|XP_012455618.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Gossypium
            raimondii] gi|763806239|gb|KJB73177.1| hypothetical
            protein B456_011G220100 [Gossypium raimondii]
          Length = 1178

 Score = 1615 bits (4181), Expect = 0.0
 Identities = 787/1170 (67%), Positives = 953/1170 (81%), Gaps = 1/1170 (0%)
 Frame = -3

Query: 3924 GRIPTAEDLDALQELFKPHIESFDHFIESGLETMILHIKPLQVLDPISKKILRIWLEHPE 3745
            G+ P+ ++L+ L+ELFK HIESFD+ I+ GLE M+  +KP+Q+ DP S K LRIWL+HPE
Sbjct: 10   GQPPSVKELEELKELFKHHIESFDYMIDEGLEIMLKRVKPVQIFDPNSTKTLRIWLDHPE 69

Query: 3744 LFYPMRENVSKSRREKILPSECREAGLSYRGRFCADACFQWDNKGAVIRERFNFGHIPIM 3565
            +F P ++  SK+    +LP ECR+A +SY G    D CFQW N G VIRE+ NFG  PIM
Sbjct: 70   IFPPQKDRSSKTSAGALLPFECRQAKISYTGSLHMDVCFQW-NGGVVIREKVNFGEFPIM 128

Query: 3564 LKSKLCHLRGASPHKLISLKEEATEMGGYFICSGMERLFRLLIMPKRNYPMAFVRDTFRN 3385
            L+SK C+L+GA+P KL++ KEEA EMGGYFI +G+ER+ R LI+PKRNYPM+  R++FR 
Sbjct: 129  LRSKRCYLQGANPEKLVACKEEAREMGGYFILNGLERVVRALILPKRNYPMSLERNSFRE 188

Query: 3384 RGEGYSNQAVVIRCVREDQSAVTLKLYYLLNGSARLGFTIRGREILLPVGIVLKALVDTA 3205
            R EGY+++AVVIRCVR+D S+VT+KLYYL NGSARLGF I+G+E +LPVGIVLKAL+DT 
Sbjct: 189  RREGYTDKAVVIRCVRDDLSSVTVKLYYLRNGSARLGFWIQGKEYMLPVGIVLKALIDTN 248

Query: 3204 DKEIYDSLTSCYSEMHERGRGAIGSQLVGERAKIILDEVRELSLLDRSQCLQHIGEYFRP 3025
            D EIY  LT CY+E     +GA+GSQLVGERAKIILDEVR L+L  + QCL HIGE+F+P
Sbjct: 249  DHEIYTKLTCCYNEKDGNIKGAVGSQLVGERAKIILDEVRHLALFTKDQCLLHIGEHFQP 308

Query: 3024 IMNELDMESHFAVGKALLRDYIFVHLVDDHDKFNLLIFMLWKLFAMVDRTAVPDNADALQ 2845
            +M  ++ ES+ +V  A+LR+ IFVHL D++DKFNLLIFM+ KLF++VD+T+ PDN+D+LQ
Sbjct: 309  VMEGMETESYSSVADAVLRNRIFVHLNDNNDKFNLLIFMVQKLFSLVDQTSAPDNSDSLQ 368

Query: 2844 NQEVLQPGLVITIYLKEKLQEWLHKSRELLMNEMKNKGEQFDFCNLAHIKKVMDKCYPAT 2665
            NQE+L PG +ITIYLKEKL++WL K ++L+ +++ N  + FDFC+L  +KKVMDK     
Sbjct: 369  NQEILLPGHLITIYLKEKLEDWLRKGKKLVEDKINNNSQNFDFCSLKDVKKVMDKNSSKQ 428

Query: 2664 IGKAIESMIKNGRLNTPSSLDLQQRESMTIPAERLNFLRFLSHFRSVHRGSFFTGMRTTT 2485
            IG AIE+++K GRL T + LDLQQR   T+ AERLN+LRF+S FRSVHRG+ F G+RTT+
Sbjct: 429  IGTAIENLLKTGRLITQTGLDLQQRAGFTVQAERLNYLRFISFFRSVHRGASFAGLRTTS 488

Query: 2484 VRKLLPESWGFLCPVHTPDGTPCGLLNHLTSTCRISSFFDSQGNTKDFSKIHKSIKDVLV 2305
            VRKLLPESWGFLCPVHTPDG PCGLLNH+T TCRI+S+++SQGN +DF KI  SI DVLV
Sbjct: 489  VRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSQGNIRDFFKIRMSILDVLV 548

Query: 2304 GMGMEPLPPRVGQAGPPVVLYVLLDGRVIGFIASSEIEKFVAHIRRLKIAASSKIPDDLE 2125
            G+GM    P+V  AGPP  L VLLDG VIG ++S E +K VAH+RRLK++A+S IPDDLE
Sbjct: 549  GVGMTTSWPKVDHAGPPRSLPVLLDGCVIGSLSSGEADKVVAHLRRLKVSAASVIPDDLE 608

Query: 2124 VGYVPLTLGGAYPGLFLFTSPSRFVRPVRNISLPPKENGGVELIGPFEQAYMEIRCPDGG 1945
            VGYVPL+LGG YPGL+LFTSPSRF+RPVRNIS+P  +   +E IGPFEQ +MEI+CPDGG
Sbjct: 609  VGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISIPSSDGKDIEHIGPFEQVFMEIKCPDGG 668

Query: 1944 GGGRS-YFPATHEEIHPTGILSVVASLTPWSDHNQSPRNMYQCQMAKQTMGFSSQALQFR 1768
             GGRS  FPATHEE+ PT +LSVVA+LTPWSDHNQSPRNMYQCQMAKQTM FS QAL  R
Sbjct: 669  NGGRSTTFPATHEELMPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQALHSR 728

Query: 1767 TDNKLYHLQTPQSPIVRTAAYSKYCMDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVER 1588
             D KLYHLQTPQ+PIVRT  Y+KY +D++P+GTNAIVAVLAYTGYDMEDAMILNKS+VER
Sbjct: 729  ADQKLYHLQTPQTPIVRTKTYTKYGLDDYPSGTNAIVAVLAYTGYDMEDAMILNKSAVER 788

Query: 1587 GLFHGHIYQVETFDLVEQRKFDQAFKLFGRSNIDKSKNDLIDSDGLPYVGQMINPGEPFI 1408
            G+  G IYQ ET DL E  K +Q  ++F R + DK+ +  +DSDGLPYVGQ+I+  EP+ 
Sbjct: 789  GMCRGQIYQTETIDLCE-GKSNQGQRIFKREHSDKAISSFVDSDGLPYVGQVIHGNEPYC 847

Query: 1407 SVHNXXXXXXXXXTLKGSEPAIVDYVSIDGTTSKDFMQKVNVXXXXXRNPVIGDKFSSRH 1228
            S  N           KGSE AIVDYV++D T +K  ++KVN+     RNP+IGDKFSSRH
Sbjct: 848  STINQVTNSKRVYNHKGSEMAIVDYVAVD-TKNKQHLEKVNIRFRHPRNPIIGDKFSSRH 906

Query: 1227 GQKGVCSQLWPDIDMPFSAATGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLHGKFMD 1048
            GQKGVCSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLHGKF+D
Sbjct: 907  GQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVD 966

Query: 1047 ATPFANSIKDAYGRSTTDSDSLVDELGPMLTSYGFNYHGLEVMYSGVLGTELACEIFIGP 868
            ATPF+ ++K A G++ T+S+SLVDELG ML + GFN HG+EV+YSGV GTEL CEIFIGP
Sbjct: 967  ATPFSGAVKGANGKTETESESLVDELGSMLRARGFNCHGVEVLYSGVYGTELTCEIFIGP 1026

Query: 867  VYYQRLRHMVSDKFQVRSTGTVDPVTRQPIKGRKSGGGIRFGEMERDSVLAHGAAYLLHD 688
            VYYQRLRHMVSDK+QVR+TG VD +TRQPIKGRK GGGIRFGEMERDS+LAHGAAYLLHD
Sbjct: 1027 VYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHD 1086

Query: 687  RLHTCSDYHIADVCSLCGSILATSFIQHQKRATRHIGGLPPGRAPKKVICHACKTSRGME 508
            RLHTCSDYHIADVCSLCGSIL T+ IQ QKR  R IGGLPP RAPKKV+CHAC+TS+GME
Sbjct: 1087 RLHTCSDYHIADVCSLCGSILTTAIIQPQKRVVREIGGLPPARAPKKVMCHACQTSKGME 1146

Query: 507  TVAMPFIFRQLAVELAAMNVKMTLQLSDQA 418
            TVAMP++FR LA ELAAMN+KMT+QL  +A
Sbjct: 1147 TVAMPYVFRYLAAELAAMNIKMTIQLGSEA 1176