BLASTX nr result

ID: Cinnamomum23_contig00007138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00007138
         (807 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011019269.1| PREDICTED: LOW QUALITY PROTEIN: serine/argin...    62   6e-07
ref|XP_010086758.1| Serine/arginine-rich splicing factor 7 [Moru...    60   2e-06
ref|XP_002308490.2| hypothetical protein POPTR_0006s23170g [Popu...    60   2e-06
ref|XP_002308491.2| hypothetical protein POPTR_0006s23170g [Popu...    60   2e-06
ref|XP_008783624.1| PREDICTED: serine/arginine-rich splicing fac...    59   4e-06
ref|XP_008783623.1| PREDICTED: serine/arginine-rich splicing fac...    59   4e-06

>ref|XP_011019269.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
           factor RS2Z33 [Populus euphratica]
          Length = 295

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -1

Query: 603 RSPSPEEGSP-PLKERRQVTERNGSDYXXXXXXXXXXXSAERDSPVDRKYRSPEANGSS- 430
           RSP+P+EGSP P  + R++ +    +Y           S  R SP D +YRSP+ NG S 
Sbjct: 208 RSPTPDEGSPRPSPKSRKLDDEQDREYSGSPSXRSRSRSRSR-SPRDERYRSPQTNGRSR 266

Query: 429 -PSPRDNRSPVEYDDEDNH 376
            PSPRD+RSPV+ D EDN+
Sbjct: 267 SPSPRDDRSPVDDDYEDNN 285


>ref|XP_010086758.1| Serine/arginine-rich splicing factor 7 [Morus notabilis]
           gi|587832598|gb|EXB23437.1| Serine/arginine-rich
           splicing factor 7 [Morus notabilis]
          Length = 301

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 41/86 (47%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
 Frame = -1

Query: 606 NRSPSPEEGSPPLKERRQVTERNG-----SDYXXXXXXXXXXXSAERDSPVDRKYRSP-E 445
           +RS +P++GSP  KER   + RNG     +D            S ERDSP DR+YRSP E
Sbjct: 209 SRSATPDDGSP--KERGSPSPRNGRLSDRNDDSGSPREKSRSPSPERDSPDDRRYRSPNE 266

Query: 444 ANGSS----PSPRDNRSPVEYDDEDN 379
            NG S    PSPR++RSPV+ DD+DN
Sbjct: 267 TNGRSQSPSPSPREDRSPVD-DDDDN 291


>ref|XP_002308490.2| hypothetical protein POPTR_0006s23170g [Populus trichocarpa]
           gi|550336918|gb|EEE92013.2| hypothetical protein
           POPTR_0006s23170g [Populus trichocarpa]
          Length = 293

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = -1

Query: 603 RSPSPEEGSP-PLKERRQVTERNGSDYXXXXXXXXXXXSAERDSPVDRKYRSPEANGSS- 430
           RSP+P+EGSP P  + R++ +    +Y            +   SP D +YRSP+ NG S 
Sbjct: 208 RSPTPDEGSPRPSPKSRKLDDEQDREYSGSPTGRSR---SRSRSPRDERYRSPQTNGRSR 264

Query: 429 -PSPRDNRSPVEYDDEDNH 376
            PSPRD+RSPV+ D EDN+
Sbjct: 265 IPSPRDDRSPVDDDYEDNN 283


>ref|XP_002308491.2| hypothetical protein POPTR_0006s23170g [Populus trichocarpa]
           gi|118487500|gb|ABK95577.1| unknown [Populus
           trichocarpa] gi|550336917|gb|EEE92014.2| hypothetical
           protein POPTR_0006s23170g [Populus trichocarpa]
          Length = 252

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
 Frame = -1

Query: 603 RSPSPEEGSP-PLKERRQVTERNGSDYXXXXXXXXXXXSAERDSPVDRKYRSPEANGSS- 430
           RSP+P+EGSP P  + R++ +    +Y            +   SP D +YRSP+ NG S 
Sbjct: 167 RSPTPDEGSPRPSPKSRKLDDEQDREYSGSPTGRSR---SRSRSPRDERYRSPQTNGRSR 223

Query: 429 -PSPRDNRSPVEYDDEDNH 376
            PSPRD+RSPV+ D EDN+
Sbjct: 224 IPSPRDDRSPVDDDYEDNN 242


>ref|XP_008783624.1| PREDICTED: serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Phoenix dactylifera]
           gi|672120697|ref|XP_008783625.1| PREDICTED:
           serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Phoenix dactylifera]
           gi|672120699|ref|XP_008783626.1| PREDICTED:
           serine/arginine-rich splicing factor RS2Z33-like isoform
           X2 [Phoenix dactylifera]
          Length = 261

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 41/90 (45%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
 Frame = -1

Query: 603 RSPSPEEG-----------SPPLKERRQVTERNGSDYXXXXXXXXXXXSA--ERDSP-VD 466
           RSPSP +G           SPP KERRQ  ERNGSDY               ER+SP + 
Sbjct: 168 RSPSPSKGRKHSLSPDDSRSPPPKERRQA-ERNGSDYGESPRREDSRSPMSQERESPPMG 226

Query: 465 RKYRSPEANGSSPSPRDNRSPVEYDDEDNH 376
            ++RSPE NG SPSPRD+R      D+ NH
Sbjct: 227 LRHRSPETNGRSPSPRDDR------DDGNH 250


>ref|XP_008783623.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
           X1 [Phoenix dactylifera]
          Length = 302

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 41/90 (45%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
 Frame = -1

Query: 603 RSPSPEEG-----------SPPLKERRQVTERNGSDYXXXXXXXXXXXSA--ERDSP-VD 466
           RSPSP +G           SPP KERRQ  ERNGSDY               ER+SP + 
Sbjct: 209 RSPSPSKGRKHSLSPDDSRSPPPKERRQA-ERNGSDYGESPRREDSRSPMSQERESPPMG 267

Query: 465 RKYRSPEANGSSPSPRDNRSPVEYDDEDNH 376
            ++RSPE NG SPSPRD+R      D+ NH
Sbjct: 268 LRHRSPETNGRSPSPRDDR------DDGNH 291


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