BLASTX nr result
ID: Cinnamomum23_contig00007015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00007015
(5515 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2935 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2926 0.0
ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II su... 2905 0.0
ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial... 2896 0.0
ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II su... 2892 0.0
ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II su... 2872 0.0
ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II su... 2870 0.0
ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II su... 2858 0.0
ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2851 0.0
ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II su... 2849 0.0
ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II su... 2846 0.0
ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II su... 2845 0.0
ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II su... 2830 0.0
gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium r... 2830 0.0
ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II su... 2830 0.0
ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II su... 2826 0.0
ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II su... 2825 0.0
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 2825 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 2825 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2935 bits (7609), Expect = 0.0
Identities = 1454/1535 (94%), Positives = 1495/1535 (97%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MDMRFPYSPAEVAKVR+VQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+QKIRNPK+RLK++ DACKNK KCEGGDE++ Q DS+EPVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKMIAEYK RKKND+ E LPEPVERKQQLSAERVL+VLKRISDEDC+LLGLNPK+AR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+RTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI KAK+EVK+LI+AAQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK EF V++YEID+ENWNP YMLPEHVEDLKTIREFRNVFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
GDD +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
P+VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDVDFVKSYYEMPDEEV
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
EVEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTGDCALYLND+MLQ AIELQLPSYMEGLDFGMTPS SPI+GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y DGMMSP YLLSPN+R SPITDAQFSPYVGGMAF
Sbjct: 1501 YHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2926 bits (7586), Expect = 0.0
Identities = 1451/1535 (94%), Positives = 1494/1535 (97%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFPYSPAEV+KVR VQFGILSPD IRQMSVVQIEHSETTE+GKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+Q+IRNPK+RLK+V DACKNK KCEGGDE++VQGQD+ EP+KK RGGCGAQQPKLTI
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKMIAEYKA RKKND+ E LPEPVERKQQLSAERVLSVLKRISDEDC+LLGLNP++AR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
EDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+RTSAWHSESETGFITPGDTQVRIE+GELL GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI KAK+EVK+LI+AAQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKM+K EF V+RYEID+ENWNP YMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTGDN+WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
PEV+KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDVDFVKSYYEMPDEEV
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDE+EGFKP
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYMEGLDFGMTPS SPI GTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIMGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y +GMMSP+YLLSPN R SPITDAQFSPYVGGMAF
Sbjct: 1501 YNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>ref|XP_010935180.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2905 bits (7531), Expect = 0.0
Identities = 1433/1536 (93%), Positives = 1490/1536 (97%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL DEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPKHRLKR++DACK K+KC GGD++DVQ Q DSEEP+KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 4739 IEGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
I+GMKMIAEYKA +KK+D+ E LPEPVERKQ LSAERVLSVLKRISDEDC+LLGL+PK+A
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIRTSAWHSE+ETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI KAK++VK+LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK +F V++YEID++NWNP YMLPEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
++PEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKGE+QDES+EDDVFLK+IESNMLTEMALRGIPDINKVFIKSGKVN+FDE EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
+VEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
HLRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYMEGL+FGMTPS SPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPISGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPNVRSSPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_008806151.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2902 bits (7523), Expect = 0.0
Identities = 1432/1536 (93%), Positives = 1489/1536 (96%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MDMRFPYSPAEVAKVR VQFGILSPDEIRQMSVVQIEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL DEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPKHRLKR++DACK K+KC GGD++DVQ Q DSEEP+KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 4739 IEGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
I+GMKMIAEYKA +KK+D+ E LPEPVERKQ LSAERVLSVLKRISDEDC+LLGL+PK+A
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIRTSAWHSE+ETGFITPGDT VRIEKGELL+GTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI KAK++VK+LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK EF ++YEID++NWNP YMLPEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
++PEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FD+ EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
+VEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYMEGLDFGMTPS SPISGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPNVRSSPITDAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>gb|AIO05697.1| DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2896 bits (7508), Expect = 0.0
Identities = 1430/1536 (93%), Positives = 1485/1536 (96%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFPYSPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL DEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPKHRLKR++DACK K+KC GGD++DVQ Q DSEEP+KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 4739 IEGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
I+GMKMIAEYKA +KK+D+ E LPEPVERKQ LSAERVLSVLKRISDEDC+LLGLNPK+A
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIRTSAWHSE+ETGFITPGDT VRIEKG LL+GTLCK+TLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI KAK++VK+LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK EF ++YEID++NWNP YMLPEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
K EV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDV+FVKSYYEMPDE+
Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
++PEKISPWLLRIELNREMMVDKKLSMADIAEKINHEF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDEGPKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FDE +GFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
+VEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAA++AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
HLRGVTENIMLGQLAPIGTGDCALYLND+MLQ AIELQLPSYMEGLDFGMTPS SPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPNVRSSPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>ref|XP_010941355.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 2892 bits (7498), Expect = 0.0
Identities = 1425/1536 (92%), Positives = 1486/1536 (96%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVR VQFGILSPDEIRQMSV QIEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL DEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPKHRLKR+ DACK+K+KC GGD++D+Q Q DSEEP+KKSRGGCG+QQP +T
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 4739 IEGMKMIAEYKASRKKNDEEP-LPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
I+GMKM+AEYKA +KK+D++ LPEPVERKQ LSA+RVLSVLKRISDEDC+LLGLNP++A
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIRTSAWHSE+ETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQNGFS+GIGDTIADA TMEKINETI KAK++VK+LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK EF ++RYEID+ NWNP YMLPEHVEDLKTIREF+NVFDAEVQKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEI TTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KPEV+K KE AKNVQ ALEYTTLRSVT ATEVWYDPDPMSTII EDV+FVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
++PEKISPWLLR+ELNREMMVDKKLSMADIAEKINHEF D+TCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKG++QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FDETEGFK
Sbjct: 1261 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
+VEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+Y+EAD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEAD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
HLRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYMEGLDFGMTPS SPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPNVRSSPITDAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>ref|XP_009401403.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 2872 bits (7444), Expect = 0.0
Identities = 1419/1543 (91%), Positives = 1482/1543 (96%), Gaps = 9/1543 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVVQIEH ET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL IMRCVCFNCSKIL DE+D +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPK+RLKR++DACK+K+KC GGD++DVQGQ DSEEP+KKSRGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 4739 IEGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
I+GMKM+AEYKA +KK+DE E LPEP ERKQ LSAERVLSVLKRISDEDC+LLGLNPK+A
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 480
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIR SAWHSESETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 601 NLIRFSAWHSESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI KAK++VKDLIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQ 720
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE Q
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIEYQ 900
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
K DSLKMKK EF +V+RYEID++NWNP Y+ PEHVEDLKTIREFRNVFDAEVQKLEADRY
Sbjct: 901 KFDSLKMKKGEFDSVFRYEIDDDNWNPSYLQPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIATTGD S PMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDISIPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDDFLSMEAQKNATL FNILLRS+FASKRV+KEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSSFASKRVMKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KP V+K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTII EDV+FVKSYYEMPDE+
Sbjct: 1141 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
++PEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MND+ PKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FDE EGFK
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDENEGFK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
P+VEWMLDTEGVNLLAVMCHED+DATRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDIDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEGD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYME-------GLDFGMTPS 804
HLRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYM+ G DFGMTPS
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMDGGFGGPGGFDFGMTPS 1500
Query: 803 HSPISGTPYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
SPISGTPY +GMMSP+YLLSPN+R+SPITDAQFSPYVGGMAF
Sbjct: 1501 RSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1543
>ref|XP_006828844.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] gi|548833823|gb|ERM96260.1| hypothetical
protein AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2870 bits (7441), Expect = 0.0
Identities = 1422/1538 (92%), Positives = 1484/1538 (96%), Gaps = 4/1538 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MDMRFPYSPAEVAKVRVVQFGILSP+EIR MSVV+I+HSET ERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KC+TC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCS+IL DE+D +
Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDV-QGQDSEEPVKKSR-GGCGAQQPKL 4743
FKQ+ KIRNPK RLK+V D CKNK KCEGGD++D Q QDSEE VKK R GGCGAQQPK+
Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180
Query: 4742 TIEGMKMIAEYKASRKKNDEEP--LPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPK 4569
TIEGMKM+AEYK RKKNDE+ LPEPVERKQQL+AE+VL+VLKRI+DEDC LLGLNPK
Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240
Query: 4568 FARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAH 4389
+ARPDWMILQV+ PSVMMDTSSRSEDDLTHQLAMVIRHNENL++QE+NGAPAH
Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300
Query: 4388 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 4209
IISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360
Query: 4208 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 4029
SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420
Query: 4028 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 3849
IIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480
Query: 3848 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 3669
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV
Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540
Query: 3668 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 3489
QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK
Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600
Query: 3488 QINLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGP 3309
QINLIR SAWHSESE+GFITPGDT VRIE+GELL+GTLCKKTLGTS+GSLIHVIWEEVGP
Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660
Query: 3308 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQE 3129
DAARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETI KAK+EVK+LIKAAQE
Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720
Query: 3128 KSLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 2949
K LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780
Query: 2948 QMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 2769
QMTACVGQQNVEGKRIP+GFN RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840
Query: 2768 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE 2589
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE
Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900
Query: 2588 SQKLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEAD 2409
SQKLDSLKMK+ EF NVY+YEID ENW+P YMLPEHVEDLKTIREF+NVFDAEVQKLEAD
Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960
Query: 2408 RYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 2229
R+QLGTEI TTGDNSWPMPVNLKRLIWNAQK FKVDLRRPSDMHPMEIVEAVDKLQERLK
Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020
Query: 2228 VVPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 2049
VVPGDD +S+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080
Query: 2048 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1869
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140
Query: 1868 YLKPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPD 1689
YLK EV+KTKEKAKNVQCALEYTTLRSVT+ATEVWYDPDPMSTII EDVDFV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200
Query: 1688 EEVSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRI 1509
EEV+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260
Query: 1508 RIMNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEG 1329
RIMNDE PKGE+QDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+NKFDE EG
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320
Query: 1328 FKPEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVIS 1149
FKPE+EWMLDTEGVNLLAVMC+E+VDATRTTSNHLIEVI+VLGIEAVR++LLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380
Query: 1148 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAE 969
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440
Query: 968 ADHLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPIS 789
ADHLRGVTENIMLGQLAPIGTGDCALYLND+MLQQAIELQLPSYMEG+DFGMTPS SP++
Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500
Query: 788 GTPYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
GTPY +GMMSP YLLSPN+RSSPITDAQFSPYVGGMAF
Sbjct: 1501 GTPYHEGMMSP-YLLSPNMRSSPITDAQFSPYVGGMAF 1537
>ref|XP_011099129.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2858 bits (7408), Expect = 0.0
Identities = 1406/1537 (91%), Positives = 1479/1537 (96%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAK+RVVQFGILSPDEIRQMSVV IEHSETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVL+I+RCVCFNCSKIL DE+D K
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ +IRNPK+RLK++ DACKNK KCEGGDE+DVQGQD++EPVKK+RGGCGAQQPK++I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
+GMKM+AEYK +KKND+ E +PEPVERKQQLSAE+VLS+LKRI+DEDC LLGLNPK+AR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+R SAWH ESE GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI AK+EVK+LI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
L+SLK+KK +F ++YRYEIDN NWNP YMLPE VEDLKTIRE R+VFDAEVQKLEADRYQ
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTGDNSWP+PVN++RL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
P+VSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII EDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRK+LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE DH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYME--GLDFGMTPSHSPISG 786
LRGVTENIMLGQLAPIGTGDCALYLN++ML+QAIE+ LPSYME GL+FGMTP+ SP++G
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 785 TPYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
TPY DGMMSP+YLLSPN+R SP+TDAQFSPYVGGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_008448514.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1837
Score = 2851 bits (7390), Expect = 0.0
Identities = 1407/1535 (91%), Positives = 1472/1535 (95%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLTIMR VCFNCSKILVDE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ +I+NPK+RL+++ DACKNK KCEGGDE+DVQGQDS++PVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKM AEYKA RKKND+ E LPEPVERKQ L+AERVL +LKRI+D+DC LLGLNPK+AR
Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L RTSAWHSESETG +TPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI AK+EVK+LIK AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK+EF ++RYE ++ENW P YMLPEHVEDLKTIREFRNVF+AEVQKLEADRYQ
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
G+D LS+EAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
PE +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTII ED+DFVKSYYEMPDEE+
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
+PEKISPWLLRIELNREMMVDKKLSMA+IAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFDE EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
E+EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE DH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTG CALYLND+ML+ AIELQLPSY++GLDFGMTPS SPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y +GMMSP YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_010029631.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] gi|629090320|gb|KCW56573.1| hypothetical protein
EUGRSUZ_I02304 [Eucalyptus grandis]
Length = 1852
Score = 2849 bits (7386), Expect = 0.0
Identities = 1405/1535 (91%), Positives = 1471/1535 (95%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEDD K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ +IRNPK+RLK++ DACKNK KC+GGD++D +GQ SEEP KK+ GGCGAQQPKLTI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDEEP-LPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKMIAEYKA RKKND++ +PEPVERKQ LSAERVLSVLKRISDE C LLGLNPK+AR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+R SAWHSE+ETGFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI AK EVK LIK AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF GRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK EF V+RYEID+ENWNP YMLPE+ EDL++I E R+VFDAEVQKLEADRYQ
Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSD+HP+E+VEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
G+D LS+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
PEVSKTKE AK VQCALEYTTLRSVTQATEVWYDPDP ST I ED+DFVKSY EMPDEE+
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
SPEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+GKVNKF+E +GFKP
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
E EWMLDTEGVNLLAVMCHE VDATRTTSNHLIE+IEVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA+YAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYM+GLDFGMTP+ SPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMDGLDFGMTPARSPISGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y +GMMSP+YLLSPN+R SP TDAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 1535
>ref|XP_006659128.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Oryza
brachyantha]
Length = 1855
Score = 2846 bits (7377), Expect = 0.0
Identities = 1400/1536 (91%), Positives = 1479/1536 (96%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFPYSPAEVAKV++VQFGILSPDEIRQMSVVQIEH+ET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEDD K
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPK+RLKR++DACK+K+ C GGD++DVQ Q D++EPVK+ RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179
Query: 4739 IEGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
++GMKM+AE+KA +KKND+ E LPEPVERKQ LSAERVL+VLKRISDEDC+LLGLNPKFA
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIR SAWHSE+ETGFITPGDT VRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETI AK+EVK+LIK A +K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK EF V+RYE+D+ENW P YMLPEHVEDLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900 KLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIATTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDD +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TII EDV+FV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
V P+KISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDL+CIFNDDNA+KLILR+RI
Sbjct: 1200 VDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
NDE PKGE+QDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKF++ +GFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGFK 1319
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
P+ EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1320 PDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA+YAE+D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTG CALYLND+MLQQAIELQLPSY+EGLDFGMTP+ SPISGT
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1499
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R+SPITDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535
>ref|XP_004146161.2| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Cucumis sativus]
gi|778674691|ref|XP_011650276.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 [Cucumis sativus]
gi|700200498|gb|KGN55631.1| hypothetical protein
Csa_3G002510 [Cucumis sativus]
Length = 1867
Score = 2845 bits (7375), Expect = 0.0
Identities = 1406/1535 (91%), Positives = 1470/1535 (95%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLTIMR VCFNCSKILVDE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ +I+NPK+RL+++ DACKNK KCEGGDE+DVQGQDS++PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKM AEYKA RKKND+ E LPEPVERKQ L+AERVL +LKRI+DEDC LLGLNPK+AR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFI KDVFMN LMWWEDFDGKIPAPAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L RTSAWHSESETG ITPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI AK+EVK+LIK AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK+EF ++RYE ++ENW P YMLPEHVEDLKTIREFRNVF+AEVQKLEADRYQ
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIATTG+NSWPMPVNLKRLI NAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
G+D LS+EAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
PE +KTKE+AK VQCALEYTTLRSVTQATEVWYDPDPMSTII ED+DFVKSYYEMPDEE+
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
+PEKISPWLLRIELNREMMVDKKLSMA+IAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
NDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFDE EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
E+EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE DH
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTG CALYLND+ML+ AIELQLPSY++GLDFGMTPS SPISGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYIDGLDFGMTPSRSPISGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y +GMMSP YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_012491472.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X2
[Gossypium raimondii]
Length = 1832
Score = 2830 bits (7335), Expect = 0.0
Identities = 1399/1536 (91%), Positives = 1468/1536 (95%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ KI+NPK+RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
+GMKMIAEYKA RKKND+ E LPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+AR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTH LAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+RTSAWHSESETG ITPGDTQVRIEKGE+L+GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI KAK +VK LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNP-GYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
LDSLKMKK EF V+RY+ID+ENWNP YMLPEH+EDL+TI+E R+VFDAEV KLEADRY
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PG D LS+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
PE SKTKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
V+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFDE +G+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
EW+LDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYMEGL+FGMTP+ SP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>gb|KJB43259.1| hypothetical protein B456_007G190500 [Gossypium raimondii]
Length = 1809
Score = 2830 bits (7335), Expect = 0.0
Identities = 1399/1536 (91%), Positives = 1468/1536 (95%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ KI+NPK+RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
+GMKMIAEYKA RKKND+ E LPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+AR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTH LAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+RTSAWHSESETG ITPGDTQVRIEKGE+L+GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI KAK +VK LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNP-GYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
LDSLKMKK EF V+RY+ID+ENWNP YMLPEH+EDL+TI+E R+VFDAEV KLEADRY
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PG D LS+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
PE SKTKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
V+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFDE +G+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
EW+LDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYMEGL+FGMTP+ SP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>ref|XP_012491467.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|823191464|ref|XP_012491468.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1
isoform X1 [Gossypium raimondii]
gi|823191467|ref|XP_012491470.1| PREDICTED: DNA-directed
RNA polymerase II subunit 1 isoform X1 [Gossypium
raimondii] gi|823191470|ref|XP_012491471.1| PREDICTED:
DNA-directed RNA polymerase II subunit 1 isoform X1
[Gossypium raimondii] gi|763776132|gb|KJB43255.1|
hypothetical protein B456_007G190500 [Gossypium
raimondii] gi|763776133|gb|KJB43256.1| hypothetical
protein B456_007G190500 [Gossypium raimondii]
gi|763776135|gb|KJB43258.1| hypothetical protein
B456_007G190500 [Gossypium raimondii]
Length = 1846
Score = 2830 bits (7335), Expect = 0.0
Identities = 1399/1536 (91%), Positives = 1468/1536 (95%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKVGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ KI+NPK+RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDAEEPVKKSRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
+GMKMIAEYKA RKKND+ E LPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPK+AR
Sbjct: 181 DGMKMIAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTH LAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+RTSAWHSESETG ITPGDTQVRIEKGE+L+GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGSITPGDTQVRIEKGEVLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI KAK +VK LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKAKDDVKQLIVKAQNKDL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNP-GYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
LDSLKMKK EF V+RY+ID+ENWNP YMLPEH+EDL+TI+E R+VFDAEV KLEADRY
Sbjct: 901 LDSLKMKKSEFDRVFRYKIDDENWNPTSYMLPEHIEDLRTIQELRDVFDAEVNKLEADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PG D LS+EAQKNATLFF ILLRST ASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGADPLSVEAQKNATLFFCILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
PE SKTKEKAKNVQCALEYTTLRSVT ATEVWYDPDPMSTII ED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
V+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFDE +G+K
Sbjct: 1261 MNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
EW+LDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYMEGL+FGMTP+ SP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAF 1536
>ref|XP_009344822.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Pyrus x
bretschneideri]
Length = 1820
Score = 2826 bits (7327), Expect = 0.0
Identities = 1395/1535 (90%), Positives = 1460/1535 (95%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKV+ VQFGILSPDEIRQMSVV+IEHSET GKPK GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVKCVQFGILSPDEIRQMSVVEIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGFMK VL++MRCVCFNCSKILVDEDD K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSVMRCVCFNCSKILVDEDDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ +I+NPK RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKL+I
Sbjct: 121 FKQAMRIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKM AEYKA RKKND+ E LPEPVERKQ L+AERVLSVLKRISDED +LGLNPK+AR
Sbjct: 181 EGMKMNAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLSVLKRISDEDSQILGLNPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHN+NLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNDNLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L RTSAWHSESE+G ITPGDT VRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSESESGNITPGDTLVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI KAK+EVKDLI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
EAEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSL ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLDESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK EF + YE+D+ENWNP YML EHVEDLKTIREFRNVFDAEVQKLE DR Q
Sbjct: 901 LDSLKMKKTEFDRTFTYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 2220
LGTEIA TGDNSWP+PVNLKRLIWNAQKTFK+D RR SDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 2219 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 2040
GDD LS+EAQKNATLFFNILLRSTFASKRVL EYRLTREAFEWVIGEIESRFLQSLVAPG
Sbjct: 1021 GDDQLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 2039 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1860
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 1859 PEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEEV 1680
PE +KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDP ST+I ED+DFVK+YYEMPDEEV
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPTSTVIEEDIDFVKAYYEMPDEEV 1200
Query: 1679 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRIM 1500
+P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 1499 NDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFKP 1320
N E PKGEM DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVNKFD+ EGFK
Sbjct: 1261 NAEAPKGEMVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1320
Query: 1319 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFDG 1140
E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++E+LGIEAVR+SLLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 1139 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEADH 960
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA++AE D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDY 1440
Query: 959 LRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGTP 780
LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYM+GLDFGMTPS SP+SGTP
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSRSPVSGTP 1500
Query: 779 YRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
Y +GMMSP YLLSPN+R SPI+DAQFSPYVGGMAF
Sbjct: 1501 YHEGMMSPNYLLSPNLRLSPISDAQFSPYVGGMAF 1535
>ref|XP_011022252.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Populus
euphratica]
Length = 1837
Score = 2825 bits (7324), Expect = 0.0
Identities = 1400/1538 (91%), Positives = 1465/1538 (95%), Gaps = 4/1538 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFPYSPAEVAKVR+VQFGILSPDEIRQMSV+QIEHSETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ KI+NPK RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
EGMKMIAEYK RKKND+ E LPEPVERKQ L+AERVLSVLKRISDEDC LLGL+PK+AR
Sbjct: 181 EGMKMIAEYKVQRKKNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QER+GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP I+KPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
LIRT+AWH +SE G ITPGDT VRIEKGELL+GTLCKKTLGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETI AK+EVKDLI+ AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIPYGF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 2400
LDSLKMKK EF V+RYE D+E+WNP YM+P+HVEDL+ IRE R+VFDAEVQKLEADRYQ
Sbjct: 901 LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMPDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960
Query: 2399 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLR--RPSDMHPMEIVEAVDKLQERLKV 2226
LGTEIATTGDN+WPMPVNLKRLIWNAQKTFK+D R R SD+HPME VEAVDKLQERLKV
Sbjct: 961 LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020
Query: 2225 VPGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA 2046
VPG+D LS+EAQKNATLFF ILLRST ASKRVL+EYRL+REAF+WVIGEIESRFLQSLVA
Sbjct: 1021 VPGEDLLSVEAQKNATLFFGILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVA 1080
Query: 2045 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1866
PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY
Sbjct: 1081 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1140
Query: 1865 LKPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDE 1686
LKPE +KTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTII ED DFVKSYYEMPDE
Sbjct: 1141 LKPEFNKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDE 1200
Query: 1685 EVSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIR 1506
EV+PEKISPWLLRIELNREMM+DKKL+MADIAEKINHEFDDDLTCIFNDDNAEKLILRIR
Sbjct: 1201 EVAPEKISPWLLRIELNREMMIDKKLNMADIAEKINHEFDDDLTCIFNDDNAEKLILRIR 1260
Query: 1505 IMNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGF 1326
IMNDE PKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KV+KFDE+EGF
Sbjct: 1261 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNAKVSKFDESEGF 1320
Query: 1325 KPEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISF 1146
K EWMLDTEGVNLLAVMC+E+VDA +TTSNHLIEVIEVLGIEAVR+SLLDELRVVISF
Sbjct: 1321 KTTEEWMLDTEGVNLLAVMCNENVDARKTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 1380
Query: 1145 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEA 966
DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE
Sbjct: 1381 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAET 1440
Query: 965 DHLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISG 786
D+LRGVTENIMLGQLAPIGTG CALYLND+ML+ AIELQLPSYMEGLDFGMTP+ SP+SG
Sbjct: 1441 DYLRGVTENIMLGQLAPIGTGYCALYLNDEMLKNAIELQLPSYMEGLDFGMTPARSPVSG 1500
Query: 785 TPYRDGMMSPTYLLSPNVRSSPITD-AQFSPYVGGMAF 675
TPY DGMMSP L+SPN+R SP D FSPYVGGMAF
Sbjct: 1501 TPYHDGMMSP-MLMSPNLRMSPTVDGVAFSPYVGGMAF 1537
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 2825 bits (7323), Expect = 0.0
Identities = 1394/1536 (90%), Positives = 1467/1536 (95%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD+RFPYSPAEVAKVR+VQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+IMRCVCFNCSKIL DE++ K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQDSEEPVKKSRGGCGAQQPKLTI 4737
FKQ+ KI+NPK+RLK++ DACKNK KCEGGDE+DVQGQD+EEPVKKSRGGCGAQQPKL+I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 4736 EGMKMIAEYKASRKKNDE-EPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFAR 4560
+GMKMIAEYK RK+ND+ E LPEPVERKQ L+AERVLSVLKRISDEDC LLGLNPKFAR
Sbjct: 181 DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240
Query: 4559 PDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHIIS 4380
PDWMILQVL PSVMMDTSSRSEDDLTH LAM+IRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 4379 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 4200
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 4199 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 4020
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 4019 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 3840
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 3839 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 3660
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 3659 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 3480
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 3479 LIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 3300
L+R SAWHSE+ETGFITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660
Query: 3299 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKSL 3120
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI KAK EVK+LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720
Query: 3119 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2940
E EPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2939 ACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2760
ACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2759 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 2580
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2579 LDSLKMKKREFLNVYRYEIDNENWNP-GYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
LDSLKMKK EF V+RY ID+E+WNP YMLPEH+EDL+TI+E R+VF+AEVQKL+ADRY
Sbjct: 901 LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEIA TGD++WP+PVNLKRLIWNAQKTFKVD RR SD+HP+EIV++VDKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PG D LS+EAQKNATLFF+ILLRST ASKRVL+EYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
PE SKTKEKAKNVQCALEYTTLRSVT ATEVWYDPDP STII ED+DFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
V+PEKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
MNDEGPKGE+ DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIK K +KFDE +G+K
Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
EW+LDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAA+YAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 1440
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
+LRGVTENIMLGQLAPIGTGDCALYLND+ML+ AIELQLPSYMEGL+FGMTP+ SP+SGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT 1500
Query: 782 PYRDGMMSPTYLLSPNVRSSPITDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R SPITDAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1536
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Setaria italica]
Length = 1852
Score = 2825 bits (7322), Expect = 0.0
Identities = 1392/1537 (90%), Positives = 1473/1537 (95%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5276 MDMRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 5097
MD RFPYSPAEVAKV++VQFGILSPDEIRQMSV+QIEH+ET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5096 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRCVCFNCSKILVDEDDLK 4917
DRK+KCETCMA MAECPGHFGHLELAKPMFHIGF+KTVL+IMRCVCFNCSKIL DEDD K
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 4916 FKQSQKIRNPKHRLKRVFDACKNKQKCEGGDEMDVQGQ-DSEEPVKKSRGGCGAQQPKLT 4740
FKQ+ KIRNPK+RLKR++DACK+K+ C GGD++DVQ Q D++EPVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 4739 IEGMKMIAEYKASRKK-NDEEPLPEPVERKQQLSAERVLSVLKRISDEDCMLLGLNPKFA 4563
++GMKM+AE+KA +KK +D++ LPEPVERKQ LSAERVL+VLKRISDEDC+LLGLNPKFA
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 4562 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMVIRHNENLRKQERNGAPAHII 4383
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4382 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4203
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4202 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4023
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4022 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 3843
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 3842 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 3663
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 3662 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 3483
TLLGCRKITKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599
Query: 3482 NLIRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 3303
NLIR SAWHSE+ETGFITPGDT VRIEKGELL+GTLCKK+LGT +GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659
Query: 3302 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKAKSEVKDLIKAAQEKS 3123
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETI KAK+EVK+LIK AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719
Query: 3122 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2943
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2942 TACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2763
TACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2762 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 2583
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 2582 KLDSLKMKKREFLNVYRYEIDNENWNPGYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 2403
KLDSLKMKK EF NV+RYE+D+ENW P YMLPEHV+DLKTIREFRNVF+AEVQKLEADR+
Sbjct: 900 KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2402 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2223
QLGTEI TTGDNSWPMPVNLKRLIWNAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2222 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2043
PGDD +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 2042 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1863
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 1862 KPEVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIAEDVDFVKSYYEMPDEE 1683
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TII EDV+FV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 1682 VSPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1503
+ P+KISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259
Query: 1502 MNDEGPKGEMQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDETEGFK 1323
ND+ PKGE+QDES+EDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVNKFD++EGFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFK 1319
Query: 1322 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1143
+ EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1142 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAALYAEAD 963
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAA+YAEAD
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEAD 1439
Query: 962 HLRGVTENIMLGQLAPIGTGDCALYLNDKMLQQAIELQLPSYMEGLDFGMTPSHSPISGT 783
LRGVTENIMLGQLAPIGTG CALYLND+MLQQAIELQLPSY+EGLDFGMTP+ SPISGT
Sbjct: 1440 LLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1499
Query: 782 PYRDGMMSPTYLLSPNVRSSPI-TDAQFSPYVGGMAF 675
PY +GMMSP+YLLSPN+R+SPI TDA FSPYVG MAF
Sbjct: 1500 PYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536