BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00006868
         (1600 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010045645.1| PREDICTED: chloroplastic group IIA intron sp...   477   e-161
gb|KCW83864.1| hypothetical protein EUGRSUZ_B00725 [Eucalyptus g...   477   e-161
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   468   e-160
ref|XP_010094746.1| Chloroplastic group IIA intron splicing faci...   467   e-159
ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron sp...   466   e-159
ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron sp...   471   e-158
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   463   e-157
ref|XP_010924281.1| PREDICTED: chloroplastic group IIA intron sp...   456   e-156
ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron sp...   457   e-155
ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron sp...   457   e-155
ref|XP_009360154.1| PREDICTED: chloroplastic group IIA intron sp...   457   e-155
ref|XP_008393315.1| PREDICTED: chloroplastic group IIA intron sp...   455   e-155
ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron sp...   461   e-154
ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron sp...   461   e-154
ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron sp...   461   e-154
gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitat...   461   e-154
ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron sp...   454   e-153
ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron sp...   451   e-153
ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron sp...   451   e-153
ref|XP_006842297.1| PREDICTED: chloroplastic group IIA intron sp...   448   e-152

>ref|XP_010045645.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Eucalyptus grandis]
            gi|629119370|gb|KCW83860.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119371|gb|KCW83861.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119372|gb|KCW83862.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
            gi|629119373|gb|KCW83863.1| hypothetical protein
            EUGRSUZ_B00725 [Eucalyptus grandis]
          Length = 861

 Score =  477 bits (1228), Expect(2) = e-161
 Identities = 256/421 (60%), Positives = 291/421 (69%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRG NY  P+S+S           I+ +GD LF+PDVS     VAE G   + 
Sbjct: 293  SGSVMVVYRGKNYEGPASRS---------QPIVREGDALFIPDVSSANRAVAESGD-DVK 342

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
               EK++ S  +P   ESLTEEE E+N LLDGLGPRF +WWGTG+LPVDADLLP  IPGY
Sbjct: 343  PEREKSEVSVRSPVLKESLTEEEIEYNDLLDGLGPRFEEWWGTGVLPVDADLLPQKIPGY 402

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+TNLRKLA+SLPCHFALGRNRNH GLAAAI++LWEKS V K
Sbjct: 403  KTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSSVVK 462

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIV YRGKDFLP +VA  L+ER EL K
Sbjct: 463  IAVKRGIQNTNNKLMADELKDLTGGVLLLRNKYYIVFYRGKDFLPPTVATALSERQELAK 522

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQDVEEK R   V  T V  A++ER+E A+     E K   G  +AA + E  G A AG
Sbjct: 523  QIQDVEEKLRTGTVPPT-VATALSERQELAKQIQDVEEKLQTGTVDAAPSKEA-GYAQAG 580

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS+                    R+EH            ++LL K
Sbjct: 581  TLAEFYEAQARWGRDISNEEREKMIEEASKSKSVRLVKRIEHKLDLAQAKKLRADKLLSK 640

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SMVPA P DDQETITDEER MFR+VGLRMKPYL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 641  IEASMVPASPDDDQETITDEERTMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREL 700

Query: 1596 V 1598
            V
Sbjct: 701  V 701



 Score =  121 bits (304), Expect(2) = e-161
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = +2

Query: 56  KKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVRL 235
           K+ VKAP+LAELT+ED  LRRLR  GM LRER+SVAKAG+TQAVLEKIH  WRK ELVRL
Sbjct: 205 KRSVKAPSLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVLEKIHDKWRKEELVRL 264

Query: 236 KFHEVLAQNMKAAHEIVE 289
           KFHEVLA +MK AHE+VE
Sbjct: 265 KFHEVLAHDMKTAHEVVE 282


>gb|KCW83864.1| hypothetical protein EUGRSUZ_B00725 [Eucalyptus grandis]
          Length = 856

 Score =  477 bits (1228), Expect(2) = e-161
 Identities = 256/421 (60%), Positives = 291/421 (69%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRG NY  P+S+S           I+ +GD LF+PDVS     VAE G   + 
Sbjct: 293  SGSVMVVYRGKNYEGPASRS---------QPIVREGDALFIPDVSSANRAVAESGD-DVK 342

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
               EK++ S  +P   ESLTEEE E+N LLDGLGPRF +WWGTG+LPVDADLLP  IPGY
Sbjct: 343  PEREKSEVSVRSPVLKESLTEEEIEYNDLLDGLGPRFEEWWGTGVLPVDADLLPQKIPGY 402

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+TNLRKLA+SLPCHFALGRNRNH GLAAAI++LWEKS V K
Sbjct: 403  KTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSSVVK 462

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIV YRGKDFLP +VA  L+ER EL K
Sbjct: 463  IAVKRGIQNTNNKLMADELKDLTGGVLLLRNKYYIVFYRGKDFLPPTVATALSERQELAK 522

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQDVEEK R   V  T V  A++ER+E A+     E K   G  +AA + E  G A AG
Sbjct: 523  QIQDVEEKLRTGTVPPT-VATALSERQELAKQIQDVEEKLQTGTVDAAPSKEA-GYAQAG 580

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS+                    R+EH            ++LL K
Sbjct: 581  TLAEFYEAQARWGRDISNEEREKMIEEASKSKSVRLVKRIEHKLDLAQAKKLRADKLLSK 640

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SMVPA P DDQETITDEER MFR+VGLRMKPYL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 641  IEASMVPASPDDDQETITDEERTMFRKVGLRMKPYLPLGIRGVFDGVIENMHLHWKHREL 700

Query: 1596 V 1598
            V
Sbjct: 701  V 701



 Score =  121 bits (304), Expect(2) = e-161
 Identities = 60/78 (76%), Positives = 67/78 (85%)
 Frame = +2

Query: 56  KKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVRL 235
           K+ VKAP+LAELT+ED  LRRLR  GM LRER+SVAKAG+TQAVLEKIH  WRK ELVRL
Sbjct: 205 KRSVKAPSLAELTIEDEELRRLRRNGMYLRERISVAKAGITQAVLEKIHDKWRKEELVRL 264

Query: 236 KFHEVLAQNMKAAHEIVE 289
           KFHEVLA +MK AHE+VE
Sbjct: 265 KFHEVLAHDMKTAHEVVE 282


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  468 bits (1205), Expect(2) = e-160
 Identities = 253/421 (60%), Positives = 281/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+  +G  LF+PDVS  E      G  + +
Sbjct: 294  SGSVMVVYRGSNYKGPSK----------SQTVDREGGALFIPDVSSAETSATRSGNDATS 343

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
              +   KA    PAH+ ++TEEEAEFNSLLD LGPRFV+WWGTG+LPVDADLLP  IPGY
Sbjct: 344  GPDNNEKAVKI-PAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGY 402

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+TNLRKLA+SLPCHFALGRNRNH GLA+AI++LWEKS VAK
Sbjct: 403  KTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAK 462

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIV YRGKDFLPTSVAA LAER ELTK
Sbjct: 463  IAVKRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTK 522

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A +AA +G  EGQALAG
Sbjct: 523  QVQDVEEKMRIK-------------------------------AIDAASSGAEEGQALAG 551

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 552  TLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSK 611

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IESSM+PAGP  DQET+TDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 612  IESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 671

Query: 1596 V 1598
            V
Sbjct: 672  V 672



 Score =  125 bits (314), Expect(2) = e-160
 Identities = 63/80 (78%), Positives = 70/80 (87%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+RVKAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK ELV
Sbjct: 204 LRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKEELV 263

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 264 RLKFHEVLALDMKTAHEIVE 283


>ref|XP_010094746.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] gi|587867514|gb|EXB56911.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  467 bits (1201), Expect(2) = e-159
 Identities = 249/421 (59%), Positives = 290/421 (68%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  P  K+   +K+R         D LF+PDVS  EN +   G  S+T
Sbjct: 301  SGSVMVVYRGSNYEGPP-KTQPVNKER---------DALFIPDVSSAENFLTRSGD-SLT 349

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            ++ EK++    NP  V+++TEEEAEFNSLLD LGPRF +WWGTG++PVDADLLPP IPGY
Sbjct: 350  SNAEKSETPVRNPVSVQNMTEEEAEFNSLLDDLGPRFDEWWGTGVIPVDADLLPPKIPGY 409

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTN E+TNLRK+A+SLP HFALGRNRNH GLAAAI++LWEKS+VAK
Sbjct: 410  KTPFRLLPTGMRSRLTNGEMTNLRKVAKSLPSHFALGRNRNHQGLAAAIIKLWEKSLVAK 469

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPT+VAA LAER +L K
Sbjct: 470  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYYIVIYRGKDFLPTTVAATLAERQKLAK 529

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QD+EE+ R+  +                      E K    A ++  +GE EGQALAG
Sbjct: 530  QVQDLEEQVRVQDI----------------------EQKMQKKAVDSVPSGEEEGQALAG 567

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREI+                     R+EH            E+LL K
Sbjct: 568  TLAEFYEAQARWGREITSEEREKMIEEAAVAKHARLVKRIEHKAAVAQAKKLRAEKLLAK 627

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SMVPAGP  DQETIT+EER MFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 628  IEASMVPAGPDYDQETITEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHREL 687

Query: 1596 V 1598
            V
Sbjct: 688  V 688



 Score =  124 bits (311), Expect(2) = e-159
 Identities = 63/80 (78%), Positives = 68/80 (85%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+RV APTLAELT+ED  LRRLR  GM LR+R+SV KAGLTQAVLEKIH  WRK ELV
Sbjct: 211 LRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDRISVPKAGLTQAVLEKIHDKWRKEELV 270

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 271 RLKFHEVLAHDMKTAHEIVE 290


>ref|XP_008240263.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 820

 Score =  466 bits (1198), Expect(2) = e-159
 Identities = 252/421 (59%), Positives = 280/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+  +G  LF+PDVS  E      G  + +
Sbjct: 294  SGSVMVVYRGSNYKGPSK----------SQTVDGEGGALFIPDVSSAETSATRSGNDATS 343

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
              +   KA    PAH+ ++TEEEAEFNSLLD LGPRFV+WWGTG+LPVDADLLP  IPGY
Sbjct: 344  GPDNTEKAVKI-PAHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGY 402

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+TNLRKLA+SLPCHFALGRNRNH GLA+AI++LWEKS VAK
Sbjct: 403  KTPFRLLPTGMRSRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAK 462

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIV YRGKDFLPTSVAA LAER ELTK
Sbjct: 463  IAVKRGIQNTNNKLMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTK 522

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A + A +G  EGQALAG
Sbjct: 523  QVQDVEEKMRIK-------------------------------AIDTASSGAEEGQALAG 551

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 552  TLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEHKLGVAQAKKLRAEKLLSK 611

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IESSM+PAGP  DQET+TDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 612  IESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 671

Query: 1596 V 1598
            V
Sbjct: 672  V 672



 Score =  125 bits (314), Expect(2) = e-159
 Identities = 63/80 (78%), Positives = 70/80 (87%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+RVKAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK ELV
Sbjct: 204 LRKRRVKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKEELV 263

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 264 RLKFHEVLALDMKTAHEIVE 283


>ref|XP_010265125.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 838

 Score =  471 bits (1213), Expect(2) = e-158
 Identities = 257/421 (61%), Positives = 285/421 (67%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGS+MVVYRGSNY  P S+           T+  +G+ LFVPDVS   N +++I    I 
Sbjct: 308  SGSIMVVYRGSNYE-PFSRL---------KTVESEGNALFVPDVSSSANSISKINN-DIM 356

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            ++ EK      NP   ES+TEEEAE+NSLLDGLGPRFVDWWGTG+LPVDADLLP  IP Y
Sbjct: 357  SAPEKKDPGVQNPNQAESMTEEEAEYNSLLDGLGPRFVDWWGTGILPVDADLLPQTIPSY 416

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMR  LTNAE+TNLRKLA+SLPCHFALGRNRNH GLAAAIV+LW+KS+VAK
Sbjct: 417  KTPFRLLPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIVKLWDKSLVAK 476

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPTSVA  LAER ELTK
Sbjct: 477  IAVKRGIQNTNNKLMAEELKKLTGGVLLLRNKYYIVIYRGKDFLPTSVAFALAERQELTK 536

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
            +IQDVEEKAR                                GA  +A   E+ GQALAG
Sbjct: 537  EIQDVEEKAR-------------------------------SGAVVSAHVEEIGGQALAG 565

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TL+E  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 566  TLSEYREAQARWGREISAEEHEKMKEEASRAKNAKAVKRIEHKLTVAQAKKLRAEKLLAK 625

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE SMVP GPSDDQETITDEERFMFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 626  IEKSMVPVGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHREL 685

Query: 1596 V 1598
            V
Sbjct: 686  V 686



 Score =  118 bits (296), Expect(2) = e-158
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +2

Query: 53  RKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVR 232
           +KKRVKAPTLAELT+ED+ LRRLR  GM LRERV++ KAG+TQ +LEKIH+ WRKSELVR
Sbjct: 219 KKKRVKAPTLAELTIEDAELRRLRTLGMTLRERVNIPKAGVTQVILEKIHEKWRKSELVR 278

Query: 233 LKFHEVLAQNMKAAHEIVE 289
           LKFHE LA +MK A EIVE
Sbjct: 279 LKFHETLAHDMKTALEIVE 297


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  463 bits (1192), Expect(2) = e-157
 Identities = 254/423 (60%), Positives = 283/423 (66%), Gaps = 2/423 (0%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLV--AEIGRRS 509
            SGSVMVVYRGSNY  PS           S +I  +G+ LF+PDVS   N V  +E G+  
Sbjct: 357  SGSVMVVYRGSNYEGPSR----------SQSIDREGEALFIPDVSSASNAVRGSETGK-- 404

Query: 510  ITTSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIP 689
             T++ EK +     P   ES+TEEEAE+NSLLDG+GPRFV+WWGTG+LPVDADLLP  IP
Sbjct: 405  -TSTPEKCEPVVVKPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLLPQKIP 463

Query: 690  GYKTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIV 869
            GYKTPFRLLP GMR  LTNAE+TNLRKLA+SLPCHFALGRNRNH GLAAAI++LWEKS+V
Sbjct: 464  GYKTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLV 523

Query: 870  AKIAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVEL 1049
             KIA+KRGIQNTNNKLMA             RNKY+IVIYRGKDFLPTSVAA LAER EL
Sbjct: 524  VKIAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALAERQEL 583

Query: 1050 TKDIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQAL 1229
            TK IQDVEEK RI                                A E A +GE +G+A 
Sbjct: 584  TKQIQDVEEKVRIR-------------------------------AVEPAQSGEDKGEAP 612

Query: 1230 AGTLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLL 1409
            AGTLAE  EAQA WGREIS                     R+EH            ERLL
Sbjct: 613  AGTLAEFYEAQACWGREISAEEREKMIEEASKAKHARLVKRVEHKLAVAQAKKLRAERLL 672

Query: 1410 GKIESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYR 1589
             KIESSM+PA P  DQETITDEER MFRRVGLRMKPYL LG+RGVFDG+IENMHLHWK+R
Sbjct: 673  AKIESSMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGIRGVFDGVIENMHLHWKHR 732

Query: 1590 ELV 1598
            ELV
Sbjct: 733  ELV 735



 Score =  121 bits (304), Expect(2) = e-157
 Identities = 60/80 (75%), Positives = 69/80 (86%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           ++K+RV+APTLAELT+ED  LRRLR  GM LRER++V KAG+TQAVLEKIH  WRK ELV
Sbjct: 267 VKKRRVRAPTLAELTIEDEELRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELV 326

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 327 RLKFHEVLATDMKTAHEIVE 346


>ref|XP_010924281.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Elaeis guineensis]
          Length = 846

 Score =  456 bits (1173), Expect(2) = e-156
 Identities = 245/421 (58%), Positives = 285/421 (67%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY WPS +S S D +  S  +  +G TLF+P VS    LV E    SI+
Sbjct: 302  SGSVMVVYRGSNYKWPS-RSQSSDLEAKSTKLSDEGSTLFIPAVSGAPKLVDEKDIHSIS 360

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            ++ E+A+ S   P   ES+TEEEAE+N LLD LGPRFVDWWGTG+LPVDADLLP  IPGY
Sbjct: 361  STAEQARPSLMIPESTESMTEEEAEYNQLLDELGPRFVDWWGTGILPVDADLLPQTIPGY 420

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMRS LTNAE+TN+RKLA++LPCHFALGRNR+H GLA AI++LWEKS+V K
Sbjct: 421  KTPFRLLPMGMRSRLTNAEMTNMRKLAKTLPCHFALGRNRHHQGLAVAILKLWEKSLVVK 480

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPTSVA+ L+ER ELT+
Sbjct: 481  IAVKRGIQNTNNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPTSVASALSERQELTR 540

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
            +IQD+EEKAR    NR                     G++H     A         AL G
Sbjct: 541  NIQDLEEKAR----NR-------------------MVGESHADGLGA--------HALVG 569

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EA+ARWGR +S                     ++EH            ERLL K
Sbjct: 570  TLAEFQEAEARWGRNVSAEEYEAMKEEASRSERAKLFKKIEHKLHIAQAKKLRAERLLAK 629

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SMVP  PSDDQETITDEER +FRR+GLRMK YL LG+RGVFDG+IENMHLHWK+RE+
Sbjct: 630  IEASMVPVSPSDDQETITDEERSVFRRIGLRMKAYLPLGIRGVFDGVIENMHLHWKHREV 689

Query: 1596 V 1598
            V
Sbjct: 690  V 690



 Score =  124 bits (311), Expect(2) = e-156
 Identities = 59/80 (73%), Positives = 72/80 (90%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L+K+RV+APTLAELT+EDS LRRLR  GM+LRER+++ KAG+TQA++EKIH AWRKSELV
Sbjct: 212 LKKRRVRAPTLAELTIEDSELRRLRRHGMMLRERMTIPKAGVTQAIVEKIHDAWRKSELV 271

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHE LA +MK AHE+VE
Sbjct: 272 RLKFHEALAHDMKTAHELVE 291


>ref|XP_009347186.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 832

 Score =  457 bits (1175), Expect(2) = e-155
 Identities = 251/421 (59%), Positives = 278/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+  +   LF+PDVS  E  V   G  + T
Sbjct: 298  SGSVMVVYRGSNYKGPSQ----------SQTVDGERGGLFIPDVSSAETSVTRSGNDA-T 346

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +  +  + +   P  V ++TEEEAEF+SLLD LGPRF +WWGTG+LPVDADLLP  IPGY
Sbjct: 347  SGPDNTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFEEWWGTGVLPVDADLLPKTIPGY 406

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+T LRKLA+SLPCHFALGRNRNH GLA AI++LWEKS VAK
Sbjct: 407  KTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAK 466

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPTSVAA LAER ELTK
Sbjct: 467  IAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK 526

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A +AA TG VEGQALAG
Sbjct: 527  QVQDVEEKMRIK-------------------------------AIDAASTGAVEGQALAG 555

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 556  TLAEFYEAQARWGREISAEERERMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSK 615

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IES M+PAGP  DQETITDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 616  IESLMLPAGPDYDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 675

Query: 1596 V 1598
            V
Sbjct: 676  V 676



 Score =  123 bits (308), Expect(2) = e-155
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+R KAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK+ELV
Sbjct: 208 LRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKTELV 267

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 268 RLKFHEVLALDMKTAHEIVE 287


>ref|XP_008374754.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Malus domestica]
          Length = 827

 Score =  457 bits (1175), Expect(2) = e-155
 Identities = 251/421 (59%), Positives = 279/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+  +   LF+PDVS  E  V   G  + T
Sbjct: 295  SGSVMVVYRGSNYKGPSQ----------SQTVDGERGGLFIPDVSSAETSVMRSGNDA-T 343

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +  +K + +   P  V ++TEEEAEF+SLLD LGPRF +WWGTG+LPVDADLLP  IPGY
Sbjct: 344  SGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFEEWWGTGVLPVDADLLPKTIPGY 403

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+T LRKLA+SLPCHFALGRNRNH GLA AI++LWEKS VAK
Sbjct: 404  KTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAK 463

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPTSVAA LAER ELTK
Sbjct: 464  IAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK 523

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A +AA +G VEGQALAG
Sbjct: 524  QVQDVEEKMRIK-------------------------------AIDAASSGAVEGQALAG 552

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 553  TLAEFYEAQARWGREISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSK 612

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IES M+PAGP  DQETITDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 613  IESLMLPAGPDYDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 672

Query: 1596 V 1598
            V
Sbjct: 673  V 673



 Score =  123 bits (308), Expect(2) = e-155
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+R KAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK+ELV
Sbjct: 205 LRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKTELV 264

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 265 RLKFHEVLALDMKTAHEIVE 284


>ref|XP_009360154.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Pyrus x bretschneideri]
          Length = 824

 Score =  457 bits (1175), Expect(2) = e-155
 Identities = 248/421 (58%), Positives = 280/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+  +   LF+P++S PE      G  + T
Sbjct: 294  SGSVMVVYRGSNYKGPSQ----------SQTVDGERSGLFIPEISSPETSEMRSGNEA-T 342

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +  +K + +   P  V ++TEEEAEF+SLLD LGPRFV+WWGTG+LPVDADLLP  IPGY
Sbjct: 343  SGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGY 402

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+T LRKLA+SLPCHFALGRNRNH GLA AI++LWEKS VAK
Sbjct: 403  KTPFRLLPTGMRSRLTNAEMTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAK 462

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDF+PTSVAA L+ER ELTK
Sbjct: 463  IAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFVPTSVAAALSERQELTK 522

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A +AA +G VEGQALAG
Sbjct: 523  QVQDVEEKMRIK-------------------------------AIDAASSGAVEGQALAG 551

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 552  TLAEFYEAQARWGREISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSK 611

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IES M+PAGP  DQETITDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 612  IESLMLPAGPDYDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 671

Query: 1596 V 1598
            V
Sbjct: 672  V 672



 Score =  120 bits (302), Expect(2) = e-155
 Identities = 61/80 (76%), Positives = 69/80 (86%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L K+R KAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK+ELV
Sbjct: 204 LSKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDTWRKTELV 263

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 264 RLKFHEVLALDMKTAHEIVE 283


>ref|XP_008393315.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Malus domestica]
          Length = 813

 Score =  455 bits (1170), Expect(2) = e-155
 Identities = 248/421 (58%), Positives = 278/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS           S T+      LF+P++S PE      G  + T
Sbjct: 296  SGSVMVVYRGSNYKGPSQ----------SQTVDGXRSGLFIPEISSPETSEMRSGNEA-T 344

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +  +K + +   P  V ++TEEEAEF+SLLD LGPRFV+WWGTG+LPVDADLLP  IPGY
Sbjct: 345  SGPDKTEQALKIPERVHNMTEEEAEFHSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGY 404

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE T LRKLA+SLPCHFALGRNRNH GLA AI++LWEKS VAK
Sbjct: 405  KTPFRLLPTGMRSRLTNAEXTTLRKLAKSLPCHFALGRNRNHQGLALAIIKLWEKSSVAK 464

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDF+PTSVAA L+ER ELTK
Sbjct: 465  IAVKRGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFVPTSVAAALSERQELTK 524

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             +QDVEEK RI                                A +AA +G VEGQALAG
Sbjct: 525  QVQDVEEKVRIK-------------------------------AIDAASSGAVEGQALAG 553

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGREIS                     R+EH            E+LL K
Sbjct: 554  TLAEFYEAQARWGREISAEEREKMIEEDSRAKNAKLVRRIEHKLGVAQAKKLRAEKLLSK 613

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IES M+PAGP  DQETITDEER MFRRVGLRMK YL LG+RGVFDG++ENMHLHWK+REL
Sbjct: 614  IESLMLPAGPDYDQETITDEERVMFRRVGLRMKAYLPLGIRGVFDGVVENMHLHWKHREL 673

Query: 1596 V 1598
            V
Sbjct: 674  V 674



 Score =  122 bits (307), Expect(2) = e-155
 Identities = 62/80 (77%), Positives = 70/80 (87%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           LRK+R KAP+LAELT+ED  L+RLR  GMVLRER+SV KAG+TQAVLEKIH  WRK+ELV
Sbjct: 206 LRKRRGKAPSLAELTIEDEELKRLRRMGMVLRERISVPKAGITQAVLEKIHDMWRKTELV 265

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHEVLA +MK AHEIVE
Sbjct: 266 RLKFHEVLALDMKTAHEIVE 285


>ref|XP_012440290.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763785914|gb|KJB52985.1| hypothetical protein
            B456_008G286900 [Gossypium raimondii]
          Length = 868

 Score =  461 bits (1186), Expect(2) = e-154
 Identities = 250/421 (59%), Positives = 278/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS     +            G+ LF+PDVS      +E G  S  
Sbjct: 285  SGSVMVVYRGSNYEGPSKSQSGE------------GEALFIPDVSSAGKRESETGSGS-- 330

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
             + EK+      P   ES+TEEEAE+NSLLDGLGPRFV+WWGTG+LPVDADLLPP IPGY
Sbjct: 331  -TSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADLLPPKIPGY 389

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR  LTNAE+TNLRK+A+SLPCHFALGRNRNH GLAAAI++LWEKS+VAK
Sbjct: 390  KTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKLWEKSVVAK 449

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKY+IVIYRGKDFLPT+VAA LAER +LTK
Sbjct: 450  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAALAERQDLTK 509

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQD EEK RI                                A E A +GE +GQA AG
Sbjct: 510  QIQDAEEKLRIK-------------------------------AVEPAQSGEDKGQAPAG 538

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R+EH            ERLL K
Sbjct: 539  TLAEFYEAQARWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAK 598

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SM+PA P  DQETITDEER MFRRVGLRMKPYL LGVRGVFDG+IENMHLHWK+REL
Sbjct: 599  IEASMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHREL 658

Query: 1596 V 1598
            V
Sbjct: 659  V 659



 Score =  114 bits (285), Expect(2) = e-154
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L+K+ VKAPTLAELT+ED  LRRLR  GM LRER++V KAG+T+ VLEKIH  WRK ELV
Sbjct: 195 LKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELV 254

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHE LA +M+ AHEIVE
Sbjct: 255 RLKFHEFLAVDMRTAHEIVE 274


>ref|XP_012440292.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Gossypium raimondii]
          Length = 854

 Score =  461 bits (1186), Expect(2) = e-154
 Identities = 250/421 (59%), Positives = 278/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS     +            G+ LF+PDVS      +E G  S  
Sbjct: 285  SGSVMVVYRGSNYEGPSKSQSGE------------GEALFIPDVSSAGKRESETGSGS-- 330

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
             + EK+      P   ES+TEEEAE+NSLLDGLGPRFV+WWGTG+LPVDADLLPP IPGY
Sbjct: 331  -TSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADLLPPKIPGY 389

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR  LTNAE+TNLRK+A+SLPCHFALGRNRNH GLAAAI++LWEKS+VAK
Sbjct: 390  KTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKLWEKSVVAK 449

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKY+IVIYRGKDFLPT+VAA LAER +LTK
Sbjct: 450  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAALAERQDLTK 509

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQD EEK RI                                A E A +GE +GQA AG
Sbjct: 510  QIQDAEEKLRIK-------------------------------AVEPAQSGEDKGQAPAG 538

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R+EH            ERLL K
Sbjct: 539  TLAEFYEAQARWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAK 598

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SM+PA P  DQETITDEER MFRRVGLRMKPYL LGVRGVFDG+IENMHLHWK+REL
Sbjct: 599  IEASMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHREL 658

Query: 1596 V 1598
            V
Sbjct: 659  V 659



 Score =  114 bits (285), Expect(2) = e-154
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L+K+ VKAPTLAELT+ED  LRRLR  GM LRER++V KAG+T+ VLEKIH  WRK ELV
Sbjct: 195 LKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELV 254

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHE LA +M+ AHEIVE
Sbjct: 255 RLKFHEFLAVDMRTAHEIVE 274


>ref|XP_012440291.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Gossypium raimondii]
          Length = 854

 Score =  461 bits (1186), Expect(2) = e-154
 Identities = 250/421 (59%), Positives = 278/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS     +            G+ LF+PDVS      +E G  S  
Sbjct: 285  SGSVMVVYRGSNYEGPSKSQSGE------------GEALFIPDVSSAGKRESETGSGS-- 330

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
             + EK+      P   ES+TEEEAE+NSLLDGLGPRFV+WWGTG+LPVDADLLPP IPGY
Sbjct: 331  -TSEKSDKVVVKPERSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADLLPPKIPGY 389

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR  LTNAE+TNLRK+A+SLPCHFALGRNRNH GLAAAI++LWEKS+VAK
Sbjct: 390  KTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKLWEKSVVAK 449

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKY+IVIYRGKDFLPT+VAA LAER +LTK
Sbjct: 450  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAALAERQDLTK 509

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQD EEK RI                                A E A +GE +GQA AG
Sbjct: 510  QIQDAEEKLRIK-------------------------------AVEPAQSGEDKGQAPAG 538

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R+EH            ERLL K
Sbjct: 539  TLAEFYEAQARWGRDISAEEREKMIEEASKAKHAKLVKRVEHKLAIAQAKKLRAERLLAK 598

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SM+PA P  DQETITDEER MFRRVGLRMKPYL LGVRGVFDG+IENMHLHWK+REL
Sbjct: 599  IEASMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHREL 658

Query: 1596 V 1598
            V
Sbjct: 659  V 659



 Score =  114 bits (285), Expect(2) = e-154
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L+K+ VKAPTLAELT+ED  LRRLR  GM LRER++V KAG+T+ VLEKIH  WRK ELV
Sbjct: 195 LKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELV 254

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHE LA +M+ AHEIVE
Sbjct: 255 RLKFHEFLAVDMRTAHEIVE 274


>gb|KHG01961.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 823

 Score =  461 bits (1185), Expect(2) = e-154
 Identities = 252/421 (59%), Positives = 280/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            SGSVMVVYRGSNY  PS     +            G+ LF+PDVS      +E G  S +
Sbjct: 286  SGSVMVVYRGSNYEGPSKSQSGE------------GEALFIPDVSSAGKRESETG--SAS 331

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            TSE+  K     P   ES+TEEEAE+NSLLDGLGPRFV+WWGTG+LPVDADLLPP IPGY
Sbjct: 332  TSEKSDKVV-VKPECSESMTEEEAEYNSLLDGLGPRFVEWWGTGILPVDADLLPPKIPGY 390

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR  LTNAE+TNLRK+A+SLPCHFALGRNRNH GLAAAI++LWEKS+VAK
Sbjct: 391  KTPFRLLPAGMRPRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLVAK 450

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKY+IVIYRGKDFLPT+VAA LAER +LTK
Sbjct: 451  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTNVAAALAERQDLTK 510

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQD EEK RI                                A E A +GE +GQA AG
Sbjct: 511  QIQDAEEKLRIK-------------------------------AVEPAQSGEDKGQAPAG 539

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R+EH            ERLL K
Sbjct: 540  TLAEFYEAQARWGRDISAEEREKMIEEASKAKHAKLIKRVEHKLAIAQAKKLRAERLLAK 599

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SM+PA P  DQETITDEER MFRRVGLRMKPYL LGVRGVFDG+IENMHLHWK+REL
Sbjct: 600  IEASMIPAAPDYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVIENMHLHWKHREL 659

Query: 1596 V 1598
            V
Sbjct: 660  V 660



 Score =  114 bits (285), Expect(2) = e-154
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = +2

Query: 50  LRKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELV 229
           L+K+ VKAPTLAELT+ED  LRRLR  GM LRER++V KAG+T+ VLEKIH  WRK ELV
Sbjct: 196 LKKRTVKAPTLAELTIEDEELRRLRRMGMHLRERINVPKAGITKVVLEKIHDKWRKEELV 255

Query: 230 RLKFHEVLAQNMKAAHEIVE 289
           RLKFHE LA +M+ AHEIVE
Sbjct: 256 RLKFHEFLAVDMRTAHEIVE 275


>ref|XP_012093011.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Jatropha curcas]
            gi|802797401|ref|XP_012093012.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            [Jatropha curcas] gi|643686960|gb|KDP20125.1|
            hypothetical protein JCGZ_05894 [Jatropha curcas]
          Length = 839

 Score =  454 bits (1168), Expect(2) = e-153
 Identities = 247/421 (58%), Positives = 281/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            +GSVM+VYRGSNY  P SK  S DK+         GD LF+PDVS P+          ++
Sbjct: 282  AGSVMMVYRGSNYEGPPSKPQSVDKE---------GDALFIPDVSSPDTETLR-NHDGVS 331

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            ++ +K + +       E++TEEEAEFNSLLD LGPRF +WWGTG+LPVDADLLPP IPGY
Sbjct: 332  STVKKRELAIGRMNSAENMTEEEAEFNSLLDSLGPRFEEWWGTGILPVDADLLPPKIPGY 391

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLPTGMRS LTNAE+TNLRKLA++LPCHFALGRNRNH GLAAAI ++WEKS+VAK
Sbjct: 392  KTPFRLLPTGMRSRLTNAEMTNLRKLAKTLPCHFALGRNRNHQGLAAAIRKIWEKSLVAK 451

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLPTSVAA LAER ELTK
Sbjct: 452  IAVKRGIQNTNNKLMADELKMLTGGILLLRNKYYIVIYRGKDFLPTSVAAALAERQELTK 511

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQDVEEK R   V                               E A + E +G+ALAG
Sbjct: 512  QIQDVEEKVRSRGV-------------------------------ETALSEEGQGKALAG 540

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWG+ IS                     R+EH            ERLL K
Sbjct: 541  TLAEFYEAQARWGKTISAEEREKMIEDAARSKRARVVKRIEHKLAVAQAKKLRAERLLSK 600

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE+SM+P+GP  DQETITDEER MFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 601  IEASMLPSGPDYDQETITDEERAMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHREL 660

Query: 1596 V 1598
            V
Sbjct: 661  V 661



 Score =  117 bits (292), Expect(2) = e-153
 Identities = 59/79 (74%), Positives = 65/79 (82%)
 Frame = +2

Query: 53  RKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVR 232
           RK+ VKAPTLAELT+ED  LRRLR  GM +RER+SV KAGLT+ VLEKIH  WRK ELVR
Sbjct: 193 RKRTVKAPTLAELTIEDEELRRLRKMGMFVRERISVPKAGLTKDVLEKIHDKWRKQELVR 252

Query: 233 LKFHEVLAQNMKAAHEIVE 289
           LKFHEVLA +MK AHEI E
Sbjct: 253 LKFHEVLAHDMKTAHEITE 271


>ref|XP_011045859.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 806

 Score =  451 bits (1160), Expect(2) = e-153
 Identities = 242/421 (57%), Positives = 281/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            +GSVMVV+RG+NY  P SK    D++         GD LFVPDVS  ++++      + T
Sbjct: 276  AGSVMVVFRGTNYQGPPSKLQPADRE---------GDALFVPDVSSTDSVITRSSNIA-T 325

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +S EK+K         E++TEEEAE NSLLDGLGPRF +WWGTGLLPVDADLLPP +PGY
Sbjct: 326  SSSEKSKLVMRITEPTENMTEEEAELNSLLDGLGPRFEEWWGTGLLPVDADLLPPKVPGY 385

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR+ LTNAE+TN+RKLA++LPCHFALGRNRNH GLA AI++LWEKS+VAK
Sbjct: 386  KTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAK 445

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVI+RGKDFLP SVAA LAER E TK
Sbjct: 446  IAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEATK 505

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQDVEE+ R                                 + EAA +GE EG+ALAG
Sbjct: 506  QIQDVEERVR-------------------------------SNSVEAAPSGEDEGKALAG 534

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R EH            ERLL K
Sbjct: 535  TLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAERLLSK 594

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE++MVP+GP  DQETI++EER MFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 595  IETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHREL 654

Query: 1596 V 1598
            V
Sbjct: 655  V 655



 Score =  120 bits (300), Expect(2) = e-153
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = +2

Query: 53  RKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVR 232
           RK+RVKAPTLAELT+ED  LRRLR  GM +RER+S+ KAG+T AVLE IH  WRK ELVR
Sbjct: 187 RKRRVKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVR 246

Query: 233 LKFHEVLAQNMKAAHEIVE 289
           LKFHEVLA +MK AHEIVE
Sbjct: 247 LKFHEVLAHDMKTAHEIVE 265


>ref|XP_011045860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 802

 Score =  451 bits (1160), Expect(2) = e-153
 Identities = 242/421 (57%), Positives = 281/421 (66%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAWPSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSIT 515
            +GSVMVV+RG+NY  P SK    D++         GD LFVPDVS  ++++      + T
Sbjct: 276  AGSVMVVFRGTNYQGPPSKLQPADRE---------GDALFVPDVSSTDSVITRSSNIA-T 325

Query: 516  TSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPGY 695
            +S EK+K         E++TEEEAE NSLLDGLGPRF +WWGTGLLPVDADLLPP +PGY
Sbjct: 326  SSSEKSKLVMRITEPTENMTEEEAELNSLLDGLGPRFEEWWGTGLLPVDADLLPPKVPGY 385

Query: 696  KTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVAK 875
            KTPFRLLP GMR+ LTNAE+TN+RKLA++LPCHFALGRNRNH GLA AI++LWEKS+VAK
Sbjct: 386  KTPFRLLPVGMRARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAK 445

Query: 876  IAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELTK 1055
            IA+KRGIQNTNNKLMA             RNKYYIVI+RGKDFLP SVAA LAER E TK
Sbjct: 446  IAVKRGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEATK 505

Query: 1056 DIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQALAG 1235
             IQDVEE+ R                                 + EAA +GE EG+ALAG
Sbjct: 506  QIQDVEERVR-------------------------------SNSVEAAPSGEDEGKALAG 534

Query: 1236 TLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLLGK 1415
            TLAE  EAQARWGR+IS                     R EH            ERLL K
Sbjct: 535  TLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLVKRTEHKLAIAQAKKLRAERLLSK 594

Query: 1416 IESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYREL 1595
            IE++MVP+GP  DQETI++EER MFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+REL
Sbjct: 595  IETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHREL 654

Query: 1596 V 1598
            V
Sbjct: 655  V 655



 Score =  120 bits (300), Expect(2) = e-153
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = +2

Query: 53  RKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVR 232
           RK+RVKAPTLAELT+ED  LRRLR  GM +RER+S+ KAG+T AVLE IH  WRK ELVR
Sbjct: 187 RKRRVKAPTLAELTIEDEELRRLRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVR 246

Query: 233 LKFHEVLAQNMKAAHEIVE 289
           LKFHEVLA +MK AHEIVE
Sbjct: 247 LKFHEVLAHDMKTAHEIVE 265


>ref|XP_006842297.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  448 bits (1153), Expect(2) = e-152
 Identities = 244/423 (57%), Positives = 284/423 (67%), Gaps = 2/423 (0%)
 Frame = +3

Query: 336  SGSVMVVYRGSNYAW-PSSKSVSQDKQRTSPTILHDGDTLFVPDVSPPENLVAEIGRRSI 512
            SGSVMVVYRGS Y   PSS+  + +++  +  ++H+GDTLFVPDV+  E +     + SI
Sbjct: 274  SGSVMVVYRGSTYGQQPSSRPNTSEEEVIATNLVHEGDTLFVPDVAHSEKIPESARKNSI 333

Query: 513  TTSEEKAKASNTNPAHVESLTEEEAEFNSLLDGLGPRFVDWWGTGLLPVDADLLPPHIPG 692
             T+E   K S  +   V +LTEEE E+NS+LDGLGPRFV+WWGTG LPVDADLLP  +PG
Sbjct: 334  ITAE---KPSLFSVDEVPTLTEEEKEYNSILDGLGPRFVEWWGTGFLPVDADLLPQKVPG 390

Query: 693  YKTPFRLLPTGMRSSLTNAELTNLRKLARSLPCHFALGRNRNHHGLAAAIVRLWEKSIVA 872
            YK PFRLLP GMRS LTNAE+TNLRK AR LP HFALGRNRNH G+AAAI++LWE+S++ 
Sbjct: 391  YKPPFRLLPIGMRSRLTNAEMTNLRKFARKLPSHFALGRNRNHQGMAAAIIKLWERSLIV 450

Query: 873  KIAIKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIVIYRGKDFLPTSVAAVLAERVELT 1052
            KIA+KRGIQNTNNKLMA             RNKYYIVIYRGKDFLP SVA+ LAER  LT
Sbjct: 451  KIAVKRGIQNTNNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPPSVASALAERQALT 510

Query: 1053 KDIQDVEEKARIAPVNRTCVNAAITEREESAEDNTIFEGKAHCGAAEAADTGEVEGQ-AL 1229
            K+IQD EE+AR                            K   GAAEA    E+E Q  L
Sbjct: 511  KNIQDEEERAR----------------------------KGAIGAAEA----ELEKQEVL 538

Query: 1230 AGTLAESLEAQARWGREISDHXXXXXXXXXXXXXXXXXXNRLEHXXXXXXXXXXXXERLL 1409
            AGTLAE  EAQARWGREI+                     R+EH            E+ L
Sbjct: 539  AGTLAEFKEAQARWGREIAAEEQEKMKEEISKAKHAGLVRRIEHKFAVAQAKKLRAEKQL 598

Query: 1410 GKIESSMVPAGPSDDQETITDEERFMFRRVGLRMKPYLHLGVRGVFDGIIENMHLHWKYR 1589
             KIE+SMVP GPSDDQET+TDEER+MFRRVGLRMK YL LG+RGVFDG+IENMHLHWK+R
Sbjct: 599  SKIEASMVPVGPSDDQETVTDEERYMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 658

Query: 1590 ELV 1598
            ELV
Sbjct: 659  ELV 661



 Score =  120 bits (301), Expect(2) = e-152
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +2

Query: 53  RKKRVKAPTLAELTLEDSVLRRLRGEGMVLRERVSVAKAGLTQAVLEKIHQAWRKSELVR 232
           + +R+KAPTLAELT+EDS LRRLR  G+ LRER++V KAG+TQAVLEKIH AWRKSELVR
Sbjct: 185 KSRRIKAPTLAELTIEDSELRRLRKLGITLRERINVPKAGVTQAVLEKIHMAWRKSELVR 244

Query: 233 LKFHEVLAQNMKAAHEIVE 289
           LKFHE L  +MK AHEIVE
Sbjct: 245 LKFHETLVHDMKTAHEIVE 263