BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00006803
         (5287 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I sub...  1998   0.0  
ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I sub...  1913   0.0  
gb|AIO05696.1| putative RNA polymerase AI large subunit, partial...  1907   0.0  
ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I sub...  1906   0.0  
ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I sub...  1898   0.0  
emb|CBI29879.3| unnamed protein product [Vitis vinifera]             1888   0.0  
ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I sub...  1806   0.0  
ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I sub...  1801   0.0  
ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I sub...  1749   0.0  
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...  1743   0.0  
ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I sub...  1729   0.0  
ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I sub...  1729   0.0  
emb|CDP10074.1| unnamed protein product [Coffea canephora]           1695   0.0  
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...  1693   0.0  
ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I sub...  1681   0.0  
ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I sub...  1672   0.0  
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...  1671   0.0  
ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I sub...  1664   0.0  
gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus g...  1652   0.0  
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...  1646   0.0  

>ref|XP_010251904.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Nelumbo
            nucifera]
          Length = 1676

 Score = 1998 bits (5177), Expect = 0.0
 Identities = 1034/1688 (61%), Positives = 1229/1688 (72%), Gaps = 29/1688 (1%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+  VE+V FSF+TDEEVR +SFKKITNP + D+V RP+ GGLYD ALG   D   C+
Sbjct: 6    EGATEHVEAVRFSFLTDEEVRNLSFKKITNPTIFDNVERPLPGGLYDPALGPLDDRTPCQ 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S+ CPGHCGHIDLVLP+YNPLLF +L +LL++ CF+CH F   E +VQ YASQL+
Sbjct: 66   SCGQRSFHCPGHCGHIDLVLPVYNPLLFKILFALLQRVCFFCHKFKAKEEQVQKYASQLE 125

Query: 4767 LILKGDIVGAENLGTSFSKD-------------------EEND---EGDTRFHTDVCRST 4654
            LI+KGD+ GA+NL +  + +                   EEND   + DT  H+      
Sbjct: 126  LIIKGDVAGAKNLESVLASESSFPDKHELTHKTSESSSLEENDLTHKTDTAIHSVDQNCN 185

Query: 4653 TEDLVKHEWTSLQYSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAV 4474
               L +H WTSLQY  A SVL  FMK+ + +C  CGAK+  I  PTFGW     + N+ +
Sbjct: 186  PMHLQEHHWTSLQYKEAMSVLGDFMKDKHSRCQNCGAKSPSITCPTFGWFHMN-MSNADI 244

Query: 4473 RANVIRGVKLDQSLIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISM 4294
            RANV+RG KL  + +  A ++  S   E ++  +  +   +    E SGA +        
Sbjct: 245  RANVLRGCKLSDTFVHGAAQR--SHTAEAENVDDVLARGDDADILESSGAVSDGTLEFVT 302

Query: 4293 EAHKNIKEHLPPEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISG 4114
            E  K I EH+PP+FF Q+++  GP LP EVK  ++ LW+NEA LC+ I D+Q + L +SG
Sbjct: 303  ETDKKIGEHIPPDFFSQRKFLSGPLLPPEVKETMRLLWKNEARLCSLICDIQHERLHVSG 362

Query: 4113 ENKSYSMFFIEALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERS 3934
             N  +SMFF EALLVPP +FRPP K+G  V+ HPQ+VLL KV+QSNI+L NA+ N+S+RS
Sbjct: 363  MNARHSMFFTEALLVPPIKFRPPAKSGDSVMEHPQTVLLGKVLQSNIALGNAHANSSDRS 422

Query: 3933 KLVPRWMDLQLAVNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSV 3754
            K++PRWMDLQ  VN+L+DS+ + ++ D    GICQLLEKKEGIFRQKMMGKRVN+ACRSV
Sbjct: 423  KIIPRWMDLQQTVNILYDSKTSGQR-DNTATGICQLLEKKEGIFRQKMMGKRVNYACRSV 481

Query: 3753 ISPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVM 3574
            ISPDPYLAVNEIGIPPYFALRLTYPE+VTPWNVNKLR AIING E HPGATHYVDK A +
Sbjct: 482  ISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVNKLRDAIINGAEHHPGATHYVDKLATV 541

Query: 3573 KLPTSVNSRISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKP 3394
            KLP S   R+SISRKLPSSRG VT  GK+LE E+EGKVVYRHLQDGDIVLVNRQPTLHKP
Sbjct: 542  KLPPSRKMRMSISRKLPSSRGAVTQPGKNLEYEFEGKVVYRHLQDGDIVLVNRQPTLHKP 601

Query: 3393 SMMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYV 3214
            S+MAHVVRVL GEKT+RMHY NCSTYNADFDGDEMNVHFPQDEISRAEAFNI NANKQYV
Sbjct: 602  SIMAHVVRVLKGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAFNIVNANKQYV 661

Query: 3213 VPTSGDPIRGLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKIC 3034
            VPTSG PIRGLIQDHIISAVLLTK+DTFLTR+E+  LLY+S VS TAL   +G   +KI 
Sbjct: 662  VPTSGQPIRGLIQDHIISAVLLTKRDTFLTRDEFSQLLYSSGVSATALGYFVGKPGQKIS 721

Query: 3033 TISSDDEITPLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR 2854
            TI+S++E+ P+LPAIWKP+P+WTGKQVIT +LNHITRGR PF+V+K G+ P++YFGK S 
Sbjct: 722  TINSEEELEPVLPAIWKPEPLWTGKQVITAVLNHITRGRTPFSVRKAGKTPEEYFGKTSG 781

Query: 2853 ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFT 2674
            E +LLI KNE +HGVIDKAQFG YGLVHTVQELYGS+ AG+LLSV SRLFT+FLQMHGFT
Sbjct: 782  EYELLIHKNELVHGVIDKAQFGGYGLVHTVQELYGSNAAGVLLSVLSRLFTIFLQMHGFT 841

Query: 2673 CGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGE 2494
            CG+DDLLI   YD+ER + L+ +++IGE  H +F+G  +   +P KLQ E E+ IR  G+
Sbjct: 842  CGIDDLLIVHRYDLERMKKLDKNEQIGEFEHWQFVGCADGDKDPIKLQVEIEKAIRRNGD 901

Query: 2493 SAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSL 2314
            SA   LDR MS A+N+LTSEVN  LFP GL K FP NCLSLMT TGAKGG+VN TQI SL
Sbjct: 902  SAVTRLDRRMSGAMNKLTSEVNKNLFPEGLCKPFPKNCLSLMTATGAKGGMVNSTQICSL 961

Query: 2313 LGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGL 2134
            LGQQELEGKRVPRMVSGKTLPCF PWD  +RAGGFI+DRFL+GL PQEYYFHCMAGR+GL
Sbjct: 962  LGQQELEGKRVPRMVSGKTLPCFPPWDPASRAGGFISDRFLTGLRPQEYYFHCMAGREGL 1021

Query: 2133 VDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQF 1954
            VDTA+KTSRSGYLQRCLVK LE LKVCYD+TVRDADGS+VQF YGEDG+DVHKTSF+ +F
Sbjct: 1022 VDTAVKTSRSGYLQRCLVKNLEGLKVCYDYTVRDADGSVVQFIYGEDGIDVHKTSFLEEF 1081

Query: 1953 KMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXX 1774
            + LA N +IV E+ +  ++   L K D YI  LP ALE KAKD+I +LSKKK   L+   
Sbjct: 1082 EALAANHRIVQERFNNQLDSEVLFKYD-YIKKLPVALEGKAKDYIDTLSKKKLKSLNLRK 1140

Query: 1773 XXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRL 1594
                           LAQPGE VGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRL
Sbjct: 1141 RKDFMKLMRSKYISSLAQPGEPVGVVAAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRL 1200

Query: 1593 QEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQ 1414
            QEIL RAS KI TPVMTCPLRKG+T DDA+RLAAKL+KV VAD+IESMEV VVP+ V+  
Sbjct: 1201 QEILMRASEKIQTPVMTCPLRKGKTEDDAKRLAAKLQKVTVADVIESMEVGVVPFSVKKH 1260

Query: 1413 QVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKI 1234
            QVST+               YS ITL+DC  TLK  FV E+ED+I  HLL LSKI  I  
Sbjct: 1261 QVSTVYKLKLKLYPPELYPPYSGITLKDCQATLKFVFVGEMEDAIQSHLLMLSKIRGITN 1320

Query: 1233 IADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAAD 1054
            +     H T+              K    E              +DLG DAQKRKRQA D
Sbjct: 1321 VV----HSTQSNSGDGADEDGPTSKSQAAEENDDAGDDDDYEAPDDLGADAQKRKRQATD 1376

Query: 1053 EMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQIFDAE 874
            EMDYED ++NE+  TEN     E S GFESEIDQAE +    + GE        Q+FDAE
Sbjct: 1377 EMDYEDDMENEIVNTENGRSDIEASAGFESEIDQAEVEAGNIMDGE-------IQVFDAE 1429

Query: 873  DETXXXXXXXXXXXXXSEDNLAKQKKPK--ARLIKKKTDRAILVDARGLNFEVHFRFKQE 700
            DE                     +   +   R  KK +DRA  + A GL+FEVHFRF  E
Sbjct: 1430 DEASQTPSQHGTVSKSKSSGGKDEADARGMTRRTKKDSDRAFFMVAEGLDFEVHFRFTNE 1489

Query: 699  PHILLTQIAQKAAENVYVKSSGKINRCSVI-----DYEGNIPALQTAGVNFEAFWNMEDD 535
            PHILL QIAQK A+NVYVK SG I  CSV+     D E  IP LQT+GV+F  FWNM+DD
Sbjct: 1490 PHILLAQIAQKTAKNVYVKRSGNIELCSVVVPKKADGEPEIPELQTSGVDFPTFWNMQDD 1549

Query: 534  LDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGY 355
            LD+R++ SNDIHA+LNTYGVEAARATI+ +V  VF SYGI+VNIRHL+LIAD+MT  GGY
Sbjct: 1550 LDIRRLKSNDIHAVLNTYGVEAARATIIEQVNQVFKSYGIAVNIRHLSLIADFMTQTGGY 1609

Query: 354  RAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAF 175
            R M+R G+A T  SP  KMS+ETA+RF++EAA HGE++ LESPSAR+ LGLP+KMGTG F
Sbjct: 1610 RPMSRFGIAET-ISPFSKMSYETASRFVIEAAYHGEMDNLESPSARICLGLPVKMGTGCF 1668

Query: 174  DVLHNLQV 151
            D++  + +
Sbjct: 1669 DLMQKINI 1676


>ref|XP_010922210.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Elaeis
            guineensis]
          Length = 1674

 Score = 1913 bits (4955), Expect = 0.0
 Identities = 1016/1683 (60%), Positives = 1212/1683 (72%), Gaps = 23/1683 (1%)
 Frame = -2

Query: 5130 DQGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLC 4951
            ++ AS  V+SV F F T EE+RRIS KKIT P LLDS   PV  GLYD A+G   D   C
Sbjct: 7    EEAASEVVDSVRFRFYTAEEIRRISVKKITKPDLLDSKNAPVPDGLYDPAMGPINDTDSC 66

Query: 4950 KSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQL 4771
            KSCGQ S++CPGHCGHIDL  P+YNPLLF  L++LL+ TCF+C  F L+E KVQ YA QL
Sbjct: 67   KSCGQLSFRCPGHCGHIDLAKPLYNPLLFRNLQNLLQITCFFCRRFRLNEEKVQRYAEQL 126

Query: 4770 DLILKGDIVGAENLGT-SFSKDEENDEGDTRFHTDVCRSTTEDLVK-------HEWTSLQ 4615
            DLI KGD+VGA  L   S+ +    D G+T        ST E L+K         WTSLQ
Sbjct: 127  DLIAKGDVVGARTLEAHSWGEYYFPDGGETE---SAVISTNESLLKITNLKQQQTWTSLQ 183

Query: 4614 YSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQS 4435
            YS A S++  F++E  ++C  CG K   I SPTFGWL K  ++ S +R N I G  L  S
Sbjct: 184  YSEAISIMSKFLREKSKKCANCGRKNPTITSPTFGWLNKA-MQASDIRTNFIIGYDLGLS 242

Query: 4434 LIDEAEKQPVSGLEEQKDGSEYTSGSVEQPD--AELSGATAKEMPGISMEAHKNIKEHLP 4261
                 E Q   G + + D +  T    E+P   A++ G T K+    +++  K     LP
Sbjct: 243  ---STEDQNAEGSQPRGDSASQTD---EEPSSTAKVEGKTKKQSR--NLQKTKKQSRDLP 294

Query: 4260 PEFFKQ--KEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFF 4087
            PE  KQ      K   LP+EV+ +LK LW+N+A +C  I D+QR++L+ SG +K Y+MFF
Sbjct: 295  PEIAKQILSSGQKKHLLPSEVEAILKDLWKNQAKICALICDLQRRSLNASGRDKGYAMFF 354

Query: 4086 IEALLVPPCRFRPPCKNGGQ-VLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMD 3910
            ++ LLVPP +FRPP  +G + VL HPQ+VLLSKV +SNI+LRN   +  +   +V RWMD
Sbjct: 355  LKTLLVPPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVITDGPDHPDIVRRWMD 414

Query: 3909 LQLAVNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLA 3730
            LQ  VNVLFDS K   K ++E +GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLA
Sbjct: 415  LQRNVNVLFDSTKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLA 474

Query: 3729 VNEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNS 3550
            VNEIGIPPYFALRLTYPE+VTPWNVNKLR+AIING ++HPGATHY DK  + KL    N 
Sbjct: 475  VNEIGIPPYFALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNM 534

Query: 3549 RISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVR 3370
            R +ISRKLP+S+GV+   GK  ESE+EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVR
Sbjct: 535  RNAISRKLPTSKGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVR 594

Query: 3369 VLAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPI 3190
            VL GEKTLRMHY NCSTYNADFDGDEMNVH PQDEISRAEA NI NANKQYVVPTSGDPI
Sbjct: 595  VLKGEKTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPI 654

Query: 3189 RGLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEI 3010
            RGLIQDHI+SAVLLTK DTFLTREEYH LLYAS +   A  S  G F +K+CT+SSD EI
Sbjct: 655  RGLIQDHIVSAVLLTKLDTFLTREEYHQLLYASFMPPIA-SSQPGRFGRKVCTLSSDAEI 713

Query: 3009 TPLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQK 2830
             PLLPAIWKP P+WTGKQVIT ILNHITRGRPPFTV+  GRIP++Y GK+  E KLLI K
Sbjct: 714  QPLLPAIWKPIPLWTGKQVITAILNHITRGRPPFTVENKGRIPKEYLGKDHNELKLLIYK 773

Query: 2829 NEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLI 2650
            N+ IHG++DKAQFGKYGLVHTV ELYG+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+
Sbjct: 774  NDLIHGMVDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLL 833

Query: 2649 AKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDR 2470
             +  DMERKR+LE S+ + E VH +F   K+   +P KLQRE E+ +    ESA  SLDR
Sbjct: 834  DQSSDMERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQREIEKTLCRNRESATASLDR 893

Query: 2469 MMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEG 2290
            MMSS++N LTSEVN  LFPSGL K F  NCLSLMTTTGAKGGLVN TQISSLLGQQELEG
Sbjct: 894  MMSSSMNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEG 953

Query: 2289 KRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTS 2110
            KRVPRMVSGKTLPCF PWD + RAGGFI+DRFL+GL PQEYYFHCMAGRDGLVDTA+KTS
Sbjct: 954  KRVPRMVSGKTLPCFPPWDISCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTS 1013

Query: 2109 RSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQK 1930
            RSGYLQRCLVK LECLKV YDHTVRDADGS++QF YGEDGVDV KTSFI++   LA NQ 
Sbjct: 1014 RSGYLQRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQT 1073

Query: 1929 IVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXX 1750
            +VL++LS  +EDAHL+KS+ Y+ +LP  L   A  F   LSK  +  L            
Sbjct: 1074 VVLDRLSSQLEDAHLSKSNGYLKELPYLLRENATTF-ARLSKNHQGSLRQIRRKDLMKLM 1132

Query: 1749 XXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRAS 1570
                   LA+PGE VGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS
Sbjct: 1133 KLKYLSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS 1192

Query: 1569 YKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXX 1390
              I TPVM CPL  GRTR+ AE+LA+KL++VC+ADI+ESMEV  VP+ +   +VSTI   
Sbjct: 1193 ADIRTPVMKCPLHDGRTREAAEQLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKL 1252

Query: 1389 XXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHV 1210
                        +SD+TLEDC+ TL+  F+  +ED+I +HL  + KIS I  +  K E  
Sbjct: 1253 RMNLYPPELYPPHSDLTLEDCMTTLRTYFIDAMEDAIAKHLDMICKISDINSVTAKGESN 1312

Query: 1209 TRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGL 1030
                            ++              D + ED G+DA+KRK++A+DEM+YEDG+
Sbjct: 1313 LEEGTDEDEHGSKSTHREDKDNSRGFDDVDDDDGINEDEGMDAEKRKKRASDEMEYEDGI 1372

Query: 1029 DNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGE-NENVDDQSQIFD--------A 877
            + E     +EH G+  S GFESEIDQ E D+DYT+GG+ +  V+D S   +        A
Sbjct: 1373 EKENSAKADEHDGETQS-GFESEIDQVEADEDYTVGGDPSMEVEDPSLEAEETPESPSKA 1431

Query: 876  EDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQEP 697
            E                ++++ ++ KK   +  KKK +R I VDA+GL FEVH+ FK+EP
Sbjct: 1432 EPTPTLEDGKKKQKLADNKESKSESKKKTTKPRKKKINRTIFVDAKGLTFEVHYIFKKEP 1491

Query: 696  HILLTQIAQKAAENVYVKSSGKINRCSVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRK 520
             ILL ++AQKAA++VYVK S  I  CSV + + + P +LQTAGVNF+AFW++ED LD+ K
Sbjct: 1492 RILLAEVAQKAAKSVYVKESKNIELCSVPEPKKDEPLSLQTAGVNFQAFWDLEDHLDINK 1551

Query: 519  VVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNR 340
            + SNDIHAMLNTYGVEAARATI+ EVK VF +YGI VNIRHLTLIAD+MT  GGYR MNR
Sbjct: 1552 ITSNDIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNR 1611

Query: 339  IGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHN 160
            IGM N +TSP GKM+FETAT+FIV +A HGEV+ L++PSA V LG P+KMGTG FD++ N
Sbjct: 1612 IGMNNFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQN 1671

Query: 159  LQV 151
            LQ+
Sbjct: 1672 LQL 1674


>gb|AIO05696.1| putative RNA polymerase AI large subunit, partial [Cocos nucifera]
          Length = 1669

 Score = 1907 bits (4940), Expect = 0.0
 Identities = 1011/1679 (60%), Positives = 1199/1679 (71%), Gaps = 20/1679 (1%)
 Frame = -2

Query: 5130 DQGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLC 4951
            ++ AS  V+SV+F F T EE+R+IS KKIT P LLDS   PV  GLYD A+G   D   C
Sbjct: 7    EEAASEVVDSVHFHFYTAEEIRKISVKKITKPGLLDSKNAPVPDGLYDPAMGPINDTDSC 66

Query: 4950 KSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQL 4771
            KSCGQ S++CPGHCGHIDL   +YNPLLF  L++LL+ TCF+CH F L+E KVQ YA QL
Sbjct: 67   KSCGQLSFRCPGHCGHIDLAKQLYNPLLFRNLQNLLQITCFFCHRFRLNEEKVQRYAKQL 126

Query: 4770 DLILKGDIVGAENLGTSFSKDEENDEGDTRFHTDVCRSTTEDLVK-------HEWTSLQY 4612
            DLI KGDIVGA  L        E +E  +        ST E L+K         WTSLQY
Sbjct: 127  DLIAKGDIVGARTLEARSWGFPEGEETKS-----AVISTNESLLKITNLKQQQTWTSLQY 181

Query: 4611 SLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSL 4432
            S A S++  F++E  ++C  CG K   I SPTFGWL K  ++ S +R N I G  L  S 
Sbjct: 182  SEALSIMSKFLREKSKKCANCGRKNPTITSPTFGWLNKA-MQASDIRTNFIIGYDLGLS- 239

Query: 4431 IDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPEF 4252
                E Q     + + D +  T    E+P +        +     ++  K     LPPE 
Sbjct: 240  --STEDQNAEASQSRGDSASQTD---EEPSSIAKVERKTKKQSRDLQKTKKQSMDLPPEI 294

Query: 4251 FKQ--KEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEA 4078
             KQ      K   LP+EV+ +LK LW+N+A +C  + D+Q ++L+ SG +K Y+MFF++ 
Sbjct: 295  AKQMLSSGQKKHLLPSEVEAILKDLWKNQAKICALMCDLQHRSLNASGRDKGYAMFFLKT 354

Query: 4077 LLVPPCRFRPPCKNGGQ-VLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQL 3901
            LLVPP +FRPP  +G + VL HPQ+VLLSKV +SNI+LRN   N  +   +V RWMDLQ 
Sbjct: 355  LLVPPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRRWMDLQR 414

Query: 3900 AVNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNE 3721
             VNVLFDS K   K ++E +GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNE
Sbjct: 415  NVNVLFDSTKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNE 474

Query: 3720 IGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRIS 3541
            IGIPPYFALRLTYPE+VTPWNVNKLR+AIING ++HPGATHY DK  + KL    N R +
Sbjct: 475  IGIPPYFALRLTYPERVTPWNVNKLRYAIINGADIHPGATHYKDKERMYKLQLGRNMRNA 534

Query: 3540 ISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLA 3361
            ISRKLP+SRGV+   GK  ESE+EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL 
Sbjct: 535  ISRKLPTSRGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLK 594

Query: 3360 GEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGL 3181
            GEKTLRMHY NCSTYNADFDGDEMNVH PQDEISRAEA NI NANKQY+VPTSGDPIRGL
Sbjct: 595  GEKTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGDPIRGL 654

Query: 3180 IQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPL 3001
            IQDHI+SAVLLTK DTFLTREEYH LLYAS +   A  S  G F +K+C +S DDEI PL
Sbjct: 655  IQDHIVSAVLLTKLDTFLTREEYHQLLYASFMPPIA-SSQPGRFGRKVCILSLDDEIQPL 713

Query: 3000 LPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEF 2821
            LPAIWKP P+WTGKQVIT ILNHIT+GRPPFTV+  GRIP++Y GK+  E KLLI KN+ 
Sbjct: 714  LPAIWKPIPLWTGKQVITAILNHITQGRPPFTVENKGRIPKEYLGKDHNELKLLIYKNDL 773

Query: 2820 IHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKH 2641
            IHG+IDKAQFGKYGLVHTV ELYG+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+ + 
Sbjct: 774  IHGMIDKAQFGKYGLVHTVHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQS 833

Query: 2640 YDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMS 2461
             DMERKR+LE S+ + E VH +F   K+   +P KLQ E E + R + ESA   LDRMMS
Sbjct: 834  SDMERKRILEKSEALSEDVHIRFTAFKDGDRDPVKLQMEIEVLCRNR-ESATTLLDRMMS 892

Query: 2460 SALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRV 2281
            S++N LTSEVN  LFPSGL K F  NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRV
Sbjct: 893  SSMNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRV 952

Query: 2280 PRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSG 2101
            PRMVSGKTLPCF PWD + RAGGFI+DRFLSGL PQEYYFHCMAGRDGLVDTA+KTSRSG
Sbjct: 953  PRMVSGKTLPCFPPWDISCRAGGFISDRFLSGLRPQEYYFHCMAGRDGLVDTAVKTSRSG 1012

Query: 2100 YLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVL 1921
            YLQRCLVK LECLKV YDHTVRDADGS++QF YGEDGVDV KTSFI++   LA NQ +VL
Sbjct: 1013 YLQRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVL 1072

Query: 1920 EKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXXXXX 1741
            ++LS  +EDAHL+KS+ YI +LP  L   A  F   LSK  +  LH              
Sbjct: 1073 DRLSSQLEDAHLSKSNGYIKELPYLLRENATTF-ARLSKNHQGSLHQIRRRDLMKLMKLK 1131

Query: 1740 XXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKI 1561
                LA+PGE VGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I
Sbjct: 1132 YMSSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADI 1191

Query: 1560 LTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXX 1381
             TPVM CPL  GRTR+DAERLA+KL++VC+ADI+ESMEV  VP+ +   +VSTI      
Sbjct: 1192 RTPVMKCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLRMN 1251

Query: 1380 XXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRX 1201
                     +SD+TLEDC+ TL+  F+ ++ED+I +HL  + KIS I  +  K E     
Sbjct: 1252 LYPPELYPQHSDLTLEDCMTTLRTNFIDDMEDAIAKHLDMICKISDINSVTAKGESNLAE 1311

Query: 1200 XXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNE 1021
                          +              D + ED G+DA+KRK++A+DEM+YEDG++ E
Sbjct: 1312 GTDEGEHGSKSTHGEDKDNSRGFDDVDDDDGINEDEGMDAEKRKQRASDEMEYEDGIEKE 1371

Query: 1020 MFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGE-NENVDDQSQIFD--------AEDE 868
                 +EH G   S GFESEIDQ E D+DYT+GG+ +  V+D S   +        AE  
Sbjct: 1372 SSAKADEHDGDTQS-GFESEIDQVEADEDYTVGGDPSMEVEDPSLEVEETPESPSKAEPT 1430

Query: 867  TXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQEPHIL 688
                          S+++ ++ KK K +  KKK +R I VDA+GL FEVH+ FK+EP IL
Sbjct: 1431 PTLEDGKKKQKLADSKESKSESKKKKTKSRKKKINRTIFVDAKGLKFEVHYIFKEEPRIL 1490

Query: 687  LTQIAQKAAENVYVKSSGKINRCSVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRKVVS 511
            L ++AQK A++VYV+ S  I  CSV + + + P +LQTAGVNF+AFW++ED LDV K+ S
Sbjct: 1491 LAEVAQKTAKSVYVRDSKNIELCSVAEPKKDEPLSLQTAGVNFQAFWDLEDHLDVNKITS 1550

Query: 510  NDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGM 331
            NDIHAMLNTYGVE ARATI+ EVK VF +YGI VNIRHLTLIAD+MT  GGYR MNRIGM
Sbjct: 1551 NDIHAMLNTYGVEVARATIIKEVKGVFDAYGIRVNIRHLTLIADFMTFHGGYRPMNRIGM 1610

Query: 330  ANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQ 154
             N +TSP GKM+FETAT+FIV +A HGEV+ L++PSA V LG P+KMGTG FD++ NLQ
Sbjct: 1611 NNFNTSPFGKMTFETATKFIVGSAFHGEVDALDAPSASVCLGQPVKMGTGCFDLMQNLQ 1669


>ref|XP_008798769.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Phoenix
            dactylifera]
          Length = 1665

 Score = 1906 bits (4938), Expect = 0.0
 Identities = 1012/1679 (60%), Positives = 1196/1679 (71%), Gaps = 19/1679 (1%)
 Frame = -2

Query: 5130 DQGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLC 4951
            ++ AS  V+SV FSF T EE+R+IS KKIT P LLDS    V  GLYD ALG   D   C
Sbjct: 7    EEAASEVVDSVRFSFYTAEEIRKISVKKITKPDLLDSKNASVPDGLYDPALGPINDTDSC 66

Query: 4950 KSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQL 4771
            KSCGQ S++CPGHCGHIDL  P+YNPLLF  L++LL+ TCF+C  F L+E KVQ YA QL
Sbjct: 67   KSCGQLSFRCPGHCGHIDLARPLYNPLLFRNLQNLLQITCFFCRKFRLNEEKVQRYAEQL 126

Query: 4770 DLILKGDIVGAENLGT----SFSKDEENDEGDTRFHTDVCRSTTEDLVKHE-WTSLQYSL 4606
             LI KGDIVGA+ L       F    E +      HT    S   +L + + WTSLQ+S 
Sbjct: 127  CLIAKGDIVGAKTLEAHSWGEFYFPNEEETKSAAIHTSESLSKITNLKQQQTWTSLQHSE 186

Query: 4605 ARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLID 4426
            A S+L  F++E  ++C  C  K   I SPTFGWL K  I+ S +R+N I    L  S  +
Sbjct: 187  ALSILSKFLREKSKKCANCSRKNPTITSPTFGWLNKA-IQASDIRSNFIMESDLGLSSTE 245

Query: 4425 EAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPEFFK 4246
            +          +  +GS+    S  Q D E S  T  +         K     LPPE  K
Sbjct: 246  D----------QNTEGSQSRGDSASQLDEEPSSITKVQ------RKTKKQSRDLPPEIAK 289

Query: 4245 Q--KEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEALL 4072
            Q      K   LP+EV+ +LK LW NEA +C  I DVQR++L+  G +K Y+MFF++ LL
Sbjct: 290  QMLSSGQKKHLLPSEVEAILKDLWNNEAKICALICDVQRRSLNRLGRDKGYAMFFLKTLL 349

Query: 4071 VPPCRFRPPCKNGGQ-VLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            VPP +FRPP  +G + VL HPQ+VLLSKV +SNI+LRN   N  +   +V  WMDLQ  V
Sbjct: 350  VPPSKFRPPAGSGTRGVLEHPQNVLLSKVQESNIALRNVIANGPDHPDIVRSWMDLQRNV 409

Query: 3894 NVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG 3715
            N+LFDS K   K ++E +GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIG
Sbjct: 410  NLLFDSSKGWVKTEREVNGIRQLLEKKAGILRQKMMGKRVNFACRSVISPDPYLAVNEIG 469

Query: 3714 IPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISIS 3535
            IPPYFALRLTYPE+VTPWNVNKLRHAIING ++HPGATHY D   + KL    N R SIS
Sbjct: 470  IPPYFALRLTYPERVTPWNVNKLRHAIINGADIHPGATHYKDNERMYKLQLGRNMRNSIS 529

Query: 3534 RKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGE 3355
            RKLP+SRGV+   GK  ESE+EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 530  RKLPTSRGVLVQQGKGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 589

Query: 3354 KTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQ 3175
            KTLRMHY NCSTYNADFDGDEMNVH PQDEISRAEA NI NANKQYVVPTSGDPIRGLIQ
Sbjct: 590  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYVVPTSGDPIRGLIQ 649

Query: 3174 DHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLP 2995
            DHI+SAVLLTK DTFLTRE+YH LLYAS +   A  S  G F + +CT+SSDDEI PLLP
Sbjct: 650  DHIVSAVLLTKLDTFLTREQYHQLLYASCMPPIA-SSQPGRFGRNVCTLSSDDEIQPLLP 708

Query: 2994 AIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIH 2815
            AIWKP P+WTGKQVIT ILNHITRGRPPFTV+  GRIP++Y GKN  E KLLI  N+ IH
Sbjct: 709  AIWKPIPLWTGKQVITAILNHITRGRPPFTVENKGRIPKEYLGKNHNELKLLIYNNDLIH 768

Query: 2814 GVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYD 2635
            G++DKAQFGKYGLVHT+ ELYG+DTAGILLSVFSRLFT+FLQMHGFTCGVDDLL+ +  D
Sbjct: 769  GMVDKAQFGKYGLVHTIHELYGADTAGILLSVFSRLFTLFLQMHGFTCGVDDLLLDQSSD 828

Query: 2634 MERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSA 2455
            MERKR+LE S+ + E VH +F   K+   +P KLQRE E+++    ESA   LDRMMSS+
Sbjct: 829  MERKRILEKSEALSEDVHIRFTAFKDGDRDPMKLQREIEKVLCRNRESATTLLDRMMSSS 888

Query: 2454 LNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPR 2275
            +N LTSEVN  LFPSGL K F  NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPR
Sbjct: 889  MNVLTSEVNQTLFPSGLQKPFLRNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPR 948

Query: 2274 MVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYL 2095
            MVSGKTLPCF PWD + RAGGFI+DRFL+GL PQEYYFHCMAGRDGLVDTA+KTSRSGYL
Sbjct: 949  MVSGKTLPCFPPWDVSCRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAVKTSRSGYL 1008

Query: 2094 QRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEK 1915
            QRCLVK LECLKV YDHTVRDADGS++QF YGEDGVDV KTSFI++   LA NQ +VL++
Sbjct: 1009 QRCLVKNLECLKVSYDHTVRDADGSVIQFMYGEDGVDVLKTSFISELGALAANQTVVLDR 1068

Query: 1914 LSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXXXXXXX 1735
            LS  +EDAHL+KS+ YI +LP  L   A  F   LSK  +  LH                
Sbjct: 1069 LSSQLEDAHLSKSNGYIKELPYLLRENATTF-ARLSKNHQGSLHQIKRKDLMKLMKLKYL 1127

Query: 1734 XXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILT 1555
              LA+PGE VGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I T
Sbjct: 1128 SSLAEPGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASVDIRT 1187

Query: 1554 PVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXX 1375
            PVMTCPL  GRTR+DAERLA+KL++VC+ADI+ESMEV  VP+ +   +VSTI        
Sbjct: 1188 PVMTCPLHDGRTREDAERLASKLRRVCLADIVESMEVCSVPFCIHGNEVSTIYKLKMNLY 1247

Query: 1374 XXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXX 1195
                   +S +TLEDC+ TL+  F+  +ED+I +HL  + KIS I  +  K E       
Sbjct: 1248 PPELYPPHSSLTLEDCMITLRTDFIGAMEDAIAKHLDMICKISDISSVTAKEESNLAEGT 1307

Query: 1194 XXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMF 1015
                        +              D + ED G+DA+KRK++A+DEM+YEDG++ E  
Sbjct: 1308 DEDEHGSKSTHGEDKDNSSGFDGVDDDDGINEDEGMDAEKRKKRASDEMEYEDGIEKESS 1367

Query: 1014 VTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENE-NVDDQSQIFDAE--DETXXXXXXX 844
               +EH G+  S GFESEIDQ E D+DYT+GG++   V+D S   + E  +         
Sbjct: 1368 AKADEHDGETQS-GFESEIDQVEADEDYTVGGDHSMEVEDPSLEVEEEIPESPSKAEPTP 1426

Query: 843  XXXXXXSEDNLAKQKKPKA-------RLIKKKTDRAILVDARGLNFEVHFRFKQEPHILL 685
                   +  LA  K+ K+       +  KKK +R I VDA+GLNFEVH+ FK+EP ILL
Sbjct: 1427 TLEDGKKQQKLADSKESKSESNKTTTKPRKKKINRTIFVDAKGLNFEVHYIFKKEPRILL 1486

Query: 684  TQIAQKAAENVYVKSSGKINRCSVIDYEGNIP-ALQTAGVNFEAFWNMEDDLDVRKVVSN 508
             ++AQKAA++VYVK S  I  CSV + + + P +LQTAGVNF+AFW++ED LD+ K+ SN
Sbjct: 1487 AEVAQKAAKSVYVKESKNIELCSVTEPKKDEPLSLQTAGVNFQAFWDLEDHLDINKITSN 1546

Query: 507  DIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMA 328
            DIHAMLNTYGVEAARATI+ EVK VF +YGI VNIRHL LIAD+MT  GGYR MNRIGM 
Sbjct: 1547 DIHAMLNTYGVEAARATIIKEVKGVFDAYGIRVNIRHLMLIADFMTFHGGYRPMNRIGMT 1606

Query: 327  NTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            + +TSP GKM+FETAT+FIV +A HGEV+ L++PSA V LG P+KMGTG FD++ NLQ+
Sbjct: 1607 DFNTSPFGKMTFETATKFIVGSAFHGEVDTLDAPSASVCLGQPVKMGTGCFDLMQNLQL 1665


>ref|XP_010653802.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Vitis
            vinifera]
          Length = 1691

 Score = 1898 bits (4916), Expect = 0.0
 Identities = 1008/1719 (58%), Positives = 1202/1719 (69%), Gaps = 60/1719 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +G +  VE+V FSF TDEEVR+ SFKKIT+PL+LDSV RPV GGLYD ALGS  +   C+
Sbjct: 6    EGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQ 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S+ CPGHCGHIDLV  +YNPLLF +L +LL+KTCF+CHHF  S + VQ Y SQL+
Sbjct: 66   SCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLE 125

Query: 4767 LILKGDIVGAENLGTSFSKDEENDEGDTRFHTDVCRSTTED---------LVKHEWTSLQ 4615
            LI KGD+VGA+NL +    +    E     H   C ST            L + EWTSLQ
Sbjct: 126  LISKGDVVGAKNLDSISPSESSYPEDSDGSHVS-CSSTVNSSARDNCSVHLKQQEWTSLQ 184

Query: 4614 YSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQS 4435
               A SV+D F+K  +R C  C AK+ ++  PTFGW     + ++  RANVIRG KL++ 
Sbjct: 185  CIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLERP 244

Query: 4434 LIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKE---HL 4264
            L   AE++  S +E   D   +  G     D + + ++     GI     K ++      
Sbjct: 245  LSRVAEEKSSSEVENVNDMFPWGDGV----DTDETHSSIAPTDGIQDTVTKRLERKGAQA 300

Query: 4263 PPEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFI 4084
            P EF KQK +F GP LP+EV+ +++RLWENEA LC+ I D+ ++ L  SG    YSMFF+
Sbjct: 301  PIEFIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFL 360

Query: 4083 EALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQ 3904
            E +LVPP +FRPP K    V+ HPQ+VLL KV+Q+NI+L NA+ NNSERSK++ RWMDLQ
Sbjct: 361  ETILVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQ 420

Query: 3903 LAVNVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 3727
             ++NVLFD + A  +  ++T  GICQLLEKKEG+FRQKMMGKRVNFACRSVISPDPYLAV
Sbjct: 421  QSINVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAV 480

Query: 3726 NEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSR 3547
            NEIGIPPYFALRLTYPEKVTPWNV KLR AIING E+HPGATHYVDK + +KL  +   R
Sbjct: 481  NEIGIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMR 540

Query: 3546 ISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRV 3367
            ISISRKLPSSRGVV   G+S ++E+EGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRV
Sbjct: 541  ISISRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 600

Query: 3366 LAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIR 3187
            L GEKTLRMHY NCSTYNADFDGDEMNVHFPQDEISRAEA+NI NAN QY+VP+ GDPIR
Sbjct: 601  LKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIR 660

Query: 3186 GLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEIT 3007
            GLIQDHI+SAVLLTKKDTFLTRE+Y+ LLY+S +S +   S IG   KK+  + S+DE+ 
Sbjct: 661  GLIQDHIVSAVLLTKKDTFLTREQYNQLLYSSGLS-SGSGSFIGKPGKKVSVLDSEDEMQ 719

Query: 3006 PLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFG------------- 2866
            PLLPAIWKP+P+W+GKQVIT +LNHITRGR PFT +KDG+IP++YFG             
Sbjct: 720  PLLPAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKD 779

Query: 2865 ------------KNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLS 2722
                        K   E KLLI KNE + GVIDKAQF KYGLVH VQELYGS+TAGILLS
Sbjct: 780  PGSDRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLS 839

Query: 2721 VFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEP 2542
            V SRLFTVFLQMHGFTCGVDDLLI+ +YD+ RK  L+ S+ IGE VH KFIGS +  ++P
Sbjct: 840  VLSRLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDP 899

Query: 2541 GKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTT 2362
             KLQ E E+II + GE+A   LDRMM + LN LTS+VN  L   GL+K FP NCLSLMTT
Sbjct: 900  VKLQVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTT 959

Query: 2361 TGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGL 2182
            TGAKG  VNF+QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD  ARAGGFI+DRFL+GL
Sbjct: 960  TGAKGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGL 1019

Query: 2181 LPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCY 2002
             PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LECLKVCYD+TVRD+DGSIVQF Y
Sbjct: 1020 HPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNY 1079

Query: 2001 GEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDF 1822
            G+DGVDVH+TSFIT+F+ LA N+++V EK           K + YI  LP  L  K K F
Sbjct: 1080 GDDGVDVHQTSFITEFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKF 1133

Query: 1821 IGSLSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFH 1642
            I    ++++D  +                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH
Sbjct: 1134 IEGFMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFH 1193

Query: 1641 FAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADI 1462
             AGRGE+NVTLGIPRLQEIL  A+  I TP+MTCPL+ GR++DDAERLAAKLKKV VADI
Sbjct: 1194 LAGRGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADI 1253

Query: 1461 IESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDS 1282
             ESMEVS+VP+ VQD Q  +I               ++ I+LEDC  TL+  FVRELED+
Sbjct: 1254 TESMEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDA 1313

Query: 1281 IHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLA 1102
            I  HLL LSKIS IK     S  +                    ++             A
Sbjct: 1314 IQNHLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGG-----A 1368

Query: 1101 EDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLG 922
            EDLG+DAQKRK+QA+DEMDY D        +E E    E S G   EID  E + + +  
Sbjct: 1369 EDLGLDAQKRKQQASDEMDYGD--------SEGEPDEGEPSAGLTEEIDLVEDEVEIS-- 1418

Query: 921  GENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDA 742
              NE V     I D +DE                   AK+KK + R IKK  DRAILV A
Sbjct: 1419 -NNEEVG----ISDPKDEDSKVPSKSKSSKNKKAKTEAKRKK-RFRAIKKDFDRAILVKA 1472

Query: 741  RGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG----- 598
            +G  FEVHFRF  EPHILL QIAQKAA  VY++SSGKI+ C VID       Y G     
Sbjct: 1473 KGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKK 1532

Query: 597  ----------NIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILN 448
                       +PALQTAGV+F AFW M+D+LDVR V SN++HAMLNT+GVEAARATI+ 
Sbjct: 1533 RENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIK 1592

Query: 447  EVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIV 268
            EV  VF +YG+ VNIRHL+LIAD+MT +GGYR MNR G    S SP  KM+FETA++FIV
Sbjct: 1593 EVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIV 1652

Query: 267  EAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            EAA HG  + LES SAR+ LGLP+KMGTG FD++  +++
Sbjct: 1653 EAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1691


>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 1888 bits (4891), Expect = 0.0
 Identities = 1004/1716 (58%), Positives = 1198/1716 (69%), Gaps = 57/1716 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +G +  VE+V FSF TDEEVR+ SFKKIT+PL+LDSV RPV GGLYD ALGS  +   C+
Sbjct: 6    EGTTEFVEAVKFSFFTDEEVRKYSFKKITSPLMLDSVQRPVPGGLYDPALGSIDENTPCQ 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S+ CPGHCGHIDLV  +YNPLLF +L +LL+KTCF+CHHF  S + VQ Y SQL+
Sbjct: 66   SCGQRSFYCPGHCGHIDLVSSVYNPLLFNLLHNLLQKTCFFCHHFKTSSSLVQKYVSQLE 125

Query: 4767 LILKGDIVGAENLGTSFSKDEENDEGDTRFHTDVCRSTTED---------LVKHEWTSLQ 4615
            LI KGD+VGA+NL +    +    E     H   C ST            L + EWTSLQ
Sbjct: 126  LISKGDVVGAKNLDSISPSESSYPEDSDGSHVS-CSSTVNSSARDNCSVHLKQQEWTSLQ 184

Query: 4614 YSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQS 4435
               A SV+D F+K  +R C  C AK+ ++  PTFGW     + ++  RANVIRG KL++ 
Sbjct: 185  CIEAMSVMDNFLKLKHRDCKNCKAKSPQVTKPTFGWFHMAGLSDAQTRANVIRGSKLER- 243

Query: 4434 LIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPE 4255
                    P++G++     ++ T  S+   D  +     K +     +A        P E
Sbjct: 244  --------PLNGVD-----TDETHSSIAPTDG-IQDTVTKRLERKGAQA--------PIE 281

Query: 4254 FFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEAL 4075
            F KQK +F GP LP+EV+ +++RLWENEA LC+ I D+ ++ L  SG    YSMFF+E +
Sbjct: 282  FIKQKSFFSGPLLPSEVRDIMERLWENEAELCSFISDILQERLGASGNKAGYSMFFLETI 341

Query: 4074 LVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            LVPP +FRPP K    V+ HPQ+VLL KV+Q+NI+L NA+ NNSERSK++ RWMDLQ ++
Sbjct: 342  LVPPIKFRPPSKGQISVMEHPQTVLLGKVLQANIALGNAHANNSERSKIISRWMDLQQSI 401

Query: 3894 NVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            NVLFD + A  +  ++T  GICQLLEKKEG+FRQKMMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 402  NVLFDGKTAAGQGQRDTGSGICQLLEKKEGVFRQKMMGKRVNFACRSVISPDPYLAVNEI 461

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            GIPPYFALRLTYPEKVTPWNV KLR AIING E+HPGATHYVDK + +KL  +   RISI
Sbjct: 462  GIPPYFALRLTYPEKVTPWNVVKLRDAIINGPEIHPGATHYVDKLSTVKLAVNKKMRISI 521

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SRKLPSSRGVV   G+S ++E+EGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 522  SRKLPSSRGVVAQPGRSSDNEFEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRVLKG 581

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKTLRMHY NCSTYNADFDGDEMNVHFPQDEISRAEA+NI NAN QY+VP+ GDPIRGLI
Sbjct: 582  EKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIVPSRGDPIRGLI 641

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLL 2998
            QDHI+SAVLLTKKDTFLTRE+Y+ LLY+S +S +   S IG   KK+  + S+DE+ PLL
Sbjct: 642  QDHIVSAVLLTKKDTFLTREQYNQLLYSSGLS-SGSGSFIGKPGKKVSVLDSEDEMQPLL 700

Query: 2997 PAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFG---------------- 2866
            PAIWKP+P+W+GKQVIT +LNHITRGR PFT +KDG+IP++YFG                
Sbjct: 701  PAIWKPEPLWSGKQVITAVLNHITRGRKPFTTEKDGKIPREYFGSEIDEKKSGKGKDPGS 760

Query: 2865 ---------KNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFS 2713
                     K   E KLLI KNE + GVIDKAQF KYGLVH VQELYGS+TAGILLSV S
Sbjct: 761  DRRKEKRIEKKHGEYKLLIHKNELVRGVIDKAQFDKYGLVHMVQELYGSNTAGILLSVLS 820

Query: 2712 RLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKL 2533
            RLFTVFLQMHGFTCGVDDLLI+ +YD+ RK  L+ S+ IGE VH KFIGS +  ++P KL
Sbjct: 821  RLFTVFLQMHGFTCGVDDLLISPNYDIARKIELDKSENIGELVHCKFIGSNHGKIDPVKL 880

Query: 2532 QRETERIIRTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGA 2353
            Q E E+II + GE+A   LDRMM + LN LTS+VN  L   GL+K FP NCLSLMTTTGA
Sbjct: 881  QVEVEKIILSNGEAAITRLDRMMKNELNELTSKVNKDLLLKGLVKPFPKNCLSLMTTTGA 940

Query: 2352 KGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQ 2173
            KG  VNF+QISS LGQQ+LEGKRVPRMVSGKTLPCF PWD  ARAGGFI+DRFL+GL PQ
Sbjct: 941  KGSTVNFSQISSFLGQQDLEGKRVPRMVSGKTLPCFPPWDCAARAGGFISDRFLTGLHPQ 1000

Query: 2172 EYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGED 1993
            EYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LECLKVCYD+TVRD+DGSIVQF YG+D
Sbjct: 1001 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKVCYDYTVRDSDGSIVQFNYGDD 1060

Query: 1992 GVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGS 1813
            GVDVH+TSFIT+F+ LA N+++V EK           K + YI  LP  L  K K FI  
Sbjct: 1061 GVDVHQTSFITEFEALAVNEEVVCEKFGQD------GKFNGYIQKLPKELRKKTKKFIEG 1114

Query: 1812 LSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAG 1633
              ++++D  +                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AG
Sbjct: 1115 FMEERQDFDNMKKQKDFVNLVKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAG 1174

Query: 1632 RGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIES 1453
            RGE+NVTLGIPRLQEIL  A+  I TP+MTCPL+ GR++DDAERLAAKLKKV VADI ES
Sbjct: 1175 RGEVNVTLGIPRLQEILMTAANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITES 1234

Query: 1452 MEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHR 1273
            MEVS+VP+ VQD Q  +I               ++ I+LEDC  TL+  FVRELED+I  
Sbjct: 1235 MEVSIVPFTVQDHQTCSIYKLKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQN 1294

Query: 1272 HLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDL 1093
            HLL LSKIS IK     S  +                    ++             AEDL
Sbjct: 1295 HLLLLSKISGIKNFLPDSRSMASKETDEDASGDGLAGGNGDEDDDGEDDGG-----AEDL 1349

Query: 1092 GVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGEN 913
            G+DAQKRK+QA+DEMDY D        +E E    E S G   EID  E + + +    N
Sbjct: 1350 GLDAQKRKQQASDEMDYGD--------SEGEPDEGEPSAGLTEEIDLVEDEVEIS---NN 1398

Query: 912  ENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGL 733
            E V     I D +DE                   AK+KK + R IKK  DRAILV A+G 
Sbjct: 1399 EEVG----ISDPKDEDSKVPSKSKSSKNKKAKTEAKRKK-RFRAIKKDFDRAILVKAKGT 1453

Query: 732  NFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG-------- 598
             FEVHFRF  EPHILL QIAQKAA  VY++SSGKI+ C VID       Y G        
Sbjct: 1454 YFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDPKKREN 1513

Query: 597  -------NIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVK 439
                    +PALQTAGV+F AFW M+D+LDVR V SN++HAMLNT+GVEAARATI+ EV 
Sbjct: 1514 IPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATIIKEVF 1573

Query: 438  AVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAA 259
             VF +YG+ VNIRHL+LIAD+MT +GGYR MNR G    S SP  KM+FETA++FIVEAA
Sbjct: 1574 NVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKFIVEAA 1633

Query: 258  LHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
             HG  + LES SAR+ LGLP+KMGTG FD++  +++
Sbjct: 1634 SHGMTDNLESASARICLGLPVKMGTGCFDLMQKIEI 1669


>ref|XP_009407703.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1640

 Score = 1806 bits (4678), Expect = 0.0
 Identities = 971/1679 (57%), Positives = 1165/1679 (69%), Gaps = 20/1679 (1%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            + AS  V+SVYFSF T EEVR+IS KKIT P LLD+   PV  GLYD ALG   D   CK
Sbjct: 5    EAASGVVDSVYFSFYTSEEVRKISVKKITKPDLLDAKNSPVPDGLYDPALGPLNDTDSCK 64

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S  CPGHCGHIDL  P+YNPLLF  L+ LL+ TCF+CH F ++E KV+ Y + LD
Sbjct: 65   SCGQLSVCCPGHCGHIDLARPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVALLD 124

Query: 4767 LILKGDIVGAENL-GTSFSKDEENDEGDTRFHTDVCRSTTEDLVKH-EWTSLQYSLARSV 4594
            LI+KGDI GA +L   S+S+    +EG     T     +  D  KH  WTSLQ S A SV
Sbjct: 125  LIVKGDINGARSLEANSWSEIFFPEEGTAESVTP----SNFDKAKHLTWTSLQQSEALSV 180

Query: 4593 LDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLIDEAEK 4414
            L  FM+E  ++C  CG K   I SP FGWL K   + S +RAN I    LD S       
Sbjct: 181  LSKFMRERRKKCDNCGKKNPTIHSPIFGWLNKTT-QGSDIRANFIIDSNLDLS------- 232

Query: 4413 QPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEH-----LPPEFF 4249
                        SE    S+ Q      G +A EM   S    K +KE      LPPEF 
Sbjct: 233  -----------SSEAKYSSLTQS----RGESASEMDEESPLPQKKVKEDKELCDLPPEFI 277

Query: 4248 KQKEYF-KGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEALL 4072
            KQ     +   LP+EV+L+L  LW+NEA+LC  I  +  K+ SIS  NK  +MFF++ LL
Sbjct: 278  KQMSSSGQKHLLPSEVELILNNLWKNEANLCMLISGIHCKSSSISRGNKGCAMFFLKTLL 337

Query: 4071 VPPCRFRPPCKNGGQ-VLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            VPP +FRP  +  G+ VL HPQ+ LLSKV Q+NI L+N  + + +   ++ RWMDLQ  V
Sbjct: 338  VPPSKFRPAARTSGRGVLEHPQNTLLSKVQQANIGLKNCIIADLDHPDILRRWMDLQKTV 397

Query: 3894 NVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG 3715
            NVLFD  K   K+DKE  GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEIG
Sbjct: 398  NVLFDGTKGFAKSDKEASGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEIG 457

Query: 3714 IPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISIS 3535
            IPPYFALRLTYPE+VTPWNVNKLR AIING  +HPGATHY DK  + KL  S   R +IS
Sbjct: 458  IPPYFALRLTYPERVTPWNVNKLRCAIINGANIHPGATHYKDKERMYKLQASQTMRSAIS 517

Query: 3534 RKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGE 3355
            RKLP+SRG+    G   ESE+EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL GE
Sbjct: 518  RKLPTSRGMTAQLGMGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKGE 577

Query: 3354 KTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQ 3175
            KTLRMHY NCSTYNADFDGDEMNVH PQDEISRAEA NI NANKQY+VPTSG PIRGLIQ
Sbjct: 578  KTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLIQ 637

Query: 3174 DHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLP 2995
            DHI+SAVLLTK DTFLTREEYH LLYAS V  T+     G F +K+    SD EI PL P
Sbjct: 638  DHIVSAVLLTKMDTFLTREEYHQLLYASCVPPTSYSQRNG-FGQKVSVSWSDYEIQPLPP 696

Query: 2994 AIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFIH 2815
            AIWKP P+WTGKQVIT ILN +TRG  P T++K GRI ++Y G++     L I  N+ +H
Sbjct: 697  AIWKPTPLWTGKQVITAILNFVTRGHLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNDLVH 756

Query: 2814 GVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYD 2635
            G+IDKAQFG YGLVH V ELYG D AG+LLSVFSRLFT FLQMHGFTCGVDDLL+++  D
Sbjct: 757  GMIDKAQFGTYGLVHAVHELYGPDVAGMLLSVFSRLFTSFLQMHGFTCGVDDLLLSQKSD 816

Query: 2634 MERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSA 2455
            MERK++LE S+   E VH +F  +K+   +P +LQRE E+++R  G+SA   LDRMMS++
Sbjct: 817  MERKKILEKSETQAEEVHMRFTRTKDGDGDPMELQREIEKVLRGNGDSATALLDRMMSNS 876

Query: 2454 LNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPR 2275
            LN LTSE+N  LFP+GL K F  NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVPR
Sbjct: 877  LNSLTSEINQTLFPNGLSKPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVPR 936

Query: 2274 MVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYL 2095
            MVSGKTLPCF PWD ++R+GGFI+DRFL+GL PQEYYFHCMAGRDGLVDTAIKTSRSGYL
Sbjct: 937  MVSGKTLPCFPPWDISSRSGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGYL 996

Query: 2094 QRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEK 1915
            QRCL+K LECLKV YDHTVRDADGS+VQF YGEDGVDV KTS+I++FKML+ N+ +VL+K
Sbjct: 997  QRCLIKNLECLKVSYDHTVRDADGSVVQFIYGEDGVDVLKTSYISEFKMLSDNRNVVLQK 1056

Query: 1914 LSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXXXXXXX 1735
             S  + D  LAKS++YI +LP +L   A DF+    KK++   H                
Sbjct: 1057 FSDQIVDTSLAKSNAYIRELPCSLRDNATDFV---LKKQKSSPHQINKKDFMKLMKLKYL 1113

Query: 1734 XXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILT 1555
              LA+PGEAVGV+AAQSVGEPSTQMTLNTFH AG+G+MNVTLGIPRLQEIL  AS  I T
Sbjct: 1114 SSLAEPGEAVGVVAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIRT 1173

Query: 1554 PVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXX 1375
            P+M CPL   +T+DDAERLAAKL++V VAD++E MEV  VP+ +   Q+STI        
Sbjct: 1174 PLMNCPLHAWKTKDDAERLAAKLRRVSVADVVERMEVCTVPFSIHRNQISTIYKLKMTLY 1233

Query: 1374 XXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXX 1195
                   +S++TLEDC   L++ FV  +ED+I +H+ T+SKIS IK+++ K E+      
Sbjct: 1234 PSELYPSFSELTLEDCREVLEMTFVEAMEDAIAKHVDTISKISDIKVVSGKEENDFEEGV 1293

Query: 1194 XXXXXXXXXXXKQ---AGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDN 1024
                       ++    G E              +D G+D ++RK+QA DE++Y+DG++ 
Sbjct: 1294 DEDESRNKSSMEENADGGDEDDES---------GDDQGIDYKRRKQQANDEVEYDDGIEK 1344

Query: 1023 EMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVD------DQSQIFDAEDETX 862
            E FV   EH  +E   GFESEID  E D+DY +GG +  VD      +     D+   + 
Sbjct: 1345 ESFVAAGEH-DEETQSGFESEIDHLEADEDYLMGGGSPGVDMDLATPESPSKADSTPISE 1403

Query: 861  XXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLT 682
                         ++  +K KKPK    KKK  R I V A GL FEVH+ F+ EP ILL 
Sbjct: 1404 DDKKKSKSVEKGKKETKSKAKKPKRS--KKKIRRTIYVMAEGLKFEVHYIFRSEPRILLA 1461

Query: 681  QIAQKAAENVYVKSSGKINRCSVIDYEGNIP--ALQTAGVNFEAFWNMEDDLDVRKVVSN 508
            +IAQ+ A+ VYVK    I RCS+ + + +     LQ AGVNF+  W++E+ LD+  + SN
Sbjct: 1462 EIAQRTAKRVYVKEYKNIERCSLKENKKSTDPFMLQIAGVNFKTLWDLEEYLDINHIYSN 1521

Query: 507  DIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMA 328
            DIHAMLNTYGVEAARATI+ EV  VFG YGI VNIRHL+LIAD+MT  GGYR MNR+GM 
Sbjct: 1522 DIHAMLNTYGVEAARATIIQEVTDVFGLYGIQVNIRHLSLIADFMTFHGGYRPMNRVGMG 1581

Query: 327  NTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            + +TSP GKM+FETAT+FIVE+A HGEV+ LESPSA V+LG P+KMGTG FD++ NLQ+
Sbjct: 1582 DFNTSPFGKMTFETATKFIVESAFHGEVDTLESPSASVSLGQPVKMGTGCFDLMQNLQL 1640


>ref|XP_009394527.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Musa
            acuminata subsp. malaccensis]
          Length = 1641

 Score = 1801 bits (4665), Expect = 0.0
 Identities = 965/1683 (57%), Positives = 1162/1683 (69%), Gaps = 23/1683 (1%)
 Frame = -2

Query: 5130 DQGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLC 4951
            DQ AS  V+ V+F+F T EE+R+IS KKIT P LLD+   P+  GLYD ALG   D   C
Sbjct: 3    DQAASGVVKYVHFNFYTSEEIRKISVKKITKPDLLDAKNSPIPDGLYDPALGPLNDNDSC 62

Query: 4950 KSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQL 4771
            KSCGQ S +CPGHCGHIDL  P+YNPLLF  L+ LL+ TCF+CH F ++E KV+ Y +QL
Sbjct: 63   KSCGQLSVRCPGHCGHIDLAKPLYNPLLFKTLQGLLQITCFFCHKFKINEEKVKRYVAQL 122

Query: 4770 DLILKGDIVGAENLGTS-----FSKDEENDEGDTRFHTDVCRSTTEDLVKH-EWTSLQYS 4609
            DLI+KGDI GA +L  +     F  +EE  E  T  + D   S      KH  WTSLQ S
Sbjct: 123  DLIVKGDINGARSLEANTWSEIFFPEEETAESITS-NFDNANS------KHLTWTSLQQS 175

Query: 4608 LARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLI 4429
             A S+   FM+E  ++C  CG K   I SP FGWL K   E S +RAN I    LDQS  
Sbjct: 176  EALSIFSKFMRERRKKCDNCGKKNPTINSPIFGWLNKTTQE-SDIRANFILDSSLDQS-- 232

Query: 4428 DEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIK-EHLPPEF 4252
                             SE    S+ Q      G +A EM   S  + K +K   LPPEF
Sbjct: 233  ----------------SSEAKYSSITQS----RGESASEMDEESPLSKKKVKLGDLPPEF 272

Query: 4251 FKQKEYF-KGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEAL 4075
             KQ     +   LP+EV+ +L  LW+NEA+LC  I D+  KNLSIS  NK ++MFF++ L
Sbjct: 273  IKQMSSSGQKHLLPSEVEFILNNLWKNEANLCMLISDIHCKNLSISRGNKGFAMFFLKTL 332

Query: 4074 LVPPCRFRPPCKNGGQ-VLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLA 3898
            L+PP +FRP   + G+ VL HPQ+ LLSKV Q+NI+L+N  V N +   ++  WMDLQ  
Sbjct: 333  LIPPSKFRPAAGSSGRGVLEHPQNTLLSKVQQANIALKNCIVANPDHPDILRSWMDLQKC 392

Query: 3897 VNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            VNVLFDS K   K+DKE  GI QLLEKK GI RQKMMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 393  VNVLFDSTKGFAKSDKEASGIRQLLEKKSGILRQKMMGKRVNFACRSVISPDPYLAVNEI 452

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            GIPPYF+LRLTYPE+VTPWNVNKLR AIING ++HPGATHY DK  + KL  S N R +I
Sbjct: 453  GIPPYFSLRLTYPERVTPWNVNKLRCAIINGADIHPGATHYKDKERMYKLQASQNMRSAI 512

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SRKLP+SRG+    G   ESE+EGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL G
Sbjct: 513  SRKLPTSRGMTAQLGTGPESEFEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLKG 572

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKTLRMHY NCSTYNADFDGDEMNVH PQDEISRAEA NI NANKQY+VPTSG PIRGLI
Sbjct: 573  EKTLRMHYANCSTYNADFDGDEMNVHLPQDEISRAEAINIVNANKQYIVPTSGHPIRGLI 632

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLL 2998
            QDHI+SAVLLTK DTFLTREEYH LLYAS V  T+  S    F +K+    SD EI PL 
Sbjct: 633  QDHIVSAVLLTKMDTFLTREEYHQLLYASSVPPTSY-SQRNRFGQKVSVSWSDYEIQPLP 691

Query: 2997 PAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRENKLLIQKNEFI 2818
            PAIWKP P+WTGKQVIT ILN +TRGR P T++K GRI ++Y G++     L I  NE +
Sbjct: 692  PAIWKPTPLWTGKQVITAILNFVTRGRLPLTIEKRGRIQKEYIGEDHTLLVLHIHNNELV 751

Query: 2817 HGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHY 2638
            HG+IDKAQFG YGLVH V ELYG D AG LLSVFSRLFT FLQ+HGFTCGVDDLL+++  
Sbjct: 752  HGMIDKAQFGTYGLVHAVHELYGPDVAGTLLSVFSRLFTSFLQIHGFTCGVDDLLLSQKS 811

Query: 2637 DMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSS 2458
            D+ER+R+L+ S+     VH +F  +K+   +P KLQRE E+++R  G+SA   LDRMMS+
Sbjct: 812  DIERERILKKSEIQSGEVHMRFTRTKDGDGDPMKLQREIEKVLRGNGDSATALLDRMMSN 871

Query: 2457 ALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVP 2278
            +LN LTSE+N  LFP+GLLK F  NCLSLMTTTGAKGGLVN TQISSLLGQQELEGKRVP
Sbjct: 872  SLNSLTSEINQTLFPNGLLKPFLKNCLSLMTTTGAKGGLVNMTQISSLLGQQELEGKRVP 931

Query: 2277 RMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGY 2098
            RMVSGKTLPCF PWD ++RAGGFI+DRFL+GL PQEYYFHCMAGRDGLVDTAIKTSRSGY
Sbjct: 932  RMVSGKTLPCFPPWDISSRAGGFISDRFLTGLRPQEYYFHCMAGRDGLVDTAIKTSRSGY 991

Query: 2097 LQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLE 1918
            LQRC++K LECLKV YDHTVRDADGS++QF YGEDG+DV K S I++FKML  NQK+VL+
Sbjct: 992  LQRCIIKNLECLKVSYDHTVRDADGSVIQFIYGEDGIDVLKASHISEFKMLLDNQKVVLQ 1051

Query: 1917 KLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXXXXXX 1738
            K S  + D  LAKS++YI +LP +L  KA DFI    K ++   H               
Sbjct: 1052 KFSDQISDTSLAKSNAYIRELPCSLRDKATDFI---LKNQKSFPHQINQKDFMKLMKLKY 1108

Query: 1737 XXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKIL 1558
               LA+PGEAVGV+AAQSVGEPSTQMTLNTFH AG+G+MNVTLGIPRLQEIL  AS  I 
Sbjct: 1109 LSSLAEPGEAVGVVAAQSVGEPSTQMTLNTFHLAGKGDMNVTLGIPRLQEILMTASKDIR 1168

Query: 1557 TPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXX 1378
            TP+M CPL   +T+DDAERLAAKL++V +AD++E MEV  VP+ +   Q+STI       
Sbjct: 1169 TPLMNCPLHVWKTKDDAERLAAKLRRVSLADVVERMEVCTVPFSIHGNQISTIYKLKMTL 1228

Query: 1377 XXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXX 1198
                    +S++TLEDC   L+  FV  +ED+I +HL  + +IS IK+ + K ++     
Sbjct: 1229 YPSELYPAFSELTLEDCKEVLETTFVEAMEDAIAKHLDMIFRISDIKVASGKEDNDFEEG 1288

Query: 1197 XXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEM 1018
                         +   +              +D G D+++RK+QA DE++Y+DG++ E 
Sbjct: 1289 VDEDESRNKSNTVEENVDGGDEDYES-----LDDQGTDSRRRKQQANDEVEYDDGIEKES 1343

Query: 1017 FVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVD------------DQSQIFDAE 874
            FV   EH  +E   GFESEID  E D+DY +GG +   D            D + +  +E
Sbjct: 1344 FVAAGEH-DEEMQSGFESEIDHVEADEDYLMGGGSPGFDMDIATPESPSKADSTPV--SE 1400

Query: 873  DETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQEPH 694
            D                     K KKPK+   KKK  R I + A GL FEVH+ F+ EP 
Sbjct: 1401 DGKKKSKLTEKGKKETKSKADKKAKKPKSS--KKKIRRTIYMMAEGLKFEVHYIFRSEPR 1458

Query: 693  ILLTQIAQKAAENVYVKSSGKINRCSVIDYEGNIP--ALQTAGVNFEAFWNMEDDLDVRK 520
            ILL +IAQ+ A+ VYVK    I RCS+ + + +     LQ AGVNF   W++E+ LD+  
Sbjct: 1459 ILLAEIAQRTAKRVYVKEYKNIERCSLKENKKSTDPFMLQIAGVNFSTLWDLEEFLDIIH 1518

Query: 519  VVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNR 340
            + SNDIHAMLNTYGVEAARATI+ EV  VFG YGI VNIRHL+LIAD+MT  GGYR MNR
Sbjct: 1519 IYSNDIHAMLNTYGVEAARATIIKEVTDVFGLYGIQVNIRHLSLIADFMTFHGGYRPMNR 1578

Query: 339  IGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHN 160
            +GM + +TSP GKM+FETAT+FI+E+A HGEV+ LESPSA V+LG P+KMGTG FD++ N
Sbjct: 1579 VGMGDFNTSPFGKMTFETATKFIIESAFHGEVDTLESPSASVSLGQPVKMGTGCFDLMQN 1638

Query: 159  LQV 151
            LQ+
Sbjct: 1639 LQL 1641


>ref|XP_012470632.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Gossypium
            raimondii] gi|763751831|gb|KJB19219.1| hypothetical
            protein B456_003G089300 [Gossypium raimondii]
          Length = 1674

 Score = 1749 bits (4531), Expect = 0.0
 Identities = 953/1726 (55%), Positives = 1170/1726 (67%), Gaps = 67/1726 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+ SV++V+F+FMT EEVR+ S  K+TN  LLD + RP+ GGLYD  LG  +D   CK
Sbjct: 6    EGATDSVDAVWFNFMTTEEVRKHSVLKLTNANLLDFMNRPMPGGLYDPVLGPLEDRTPCK 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCG     CPGHCGHIDLV PIYNPLLF  L +L+++TCF+C+HF     +V+   SQL 
Sbjct: 66   SCGLLKLHCPGHCGHIDLVSPIYNPLLFNFLHTLIQRTCFFCYHFRAERTEVEKCISQLK 125

Query: 4767 LILKGDIVGAENLGTSFSKDE----ENDEGDTRFHTDVCRSTTEDLVKHEWTSLQYSLAR 4600
            LI KGDIVGA+ L +  SKD     EN EG  +  + +  S  E +   EWTSLQ + A 
Sbjct: 126  LIGKGDIVGAKRLDSD-SKDSSSHPENSEGCQKLGSRLHES--EAVNPKEWTSLQLTEAM 182

Query: 4599 SVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLIDEA 4420
            SVL+ F+K  Y++C  C AK   I  PTFGW     +  S +R NVIRG K+  +   E 
Sbjct: 183  SVLNKFLKVKYKRCKNCDAKNPAITKPTFGWFHTSGMSGSQMRENVIRGCKMADTFSGEV 242

Query: 4419 EKQPVSGLEEQKDGSEYTSG----SVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPEF 4252
                 S +E+  D S    G      + P+    GA      G S +A K  K  +P EF
Sbjct: 243  G----SDIEDANDASSSEEGVDITKTKTPEIGFKGAD-----GTSAKARKKAK--VPLEF 291

Query: 4251 FKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEALL 4072
             KQK  F GP LP+EVK ++K LWENE  LC+ I  +Q++     GE   YSMFF+E +L
Sbjct: 292  LKQKNLFSGPLLPSEVKKVMKLLWENEIELCSLINCIQQQGF---GEKVGYSMFFLETVL 348

Query: 4071 VPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPR-WMDLQLAV 3895
            VPP +FR P K G  V+ HPQ+VLLSKV+Q+NISL NAY N+ + SK++ R WMDLQ ++
Sbjct: 349  VPPIKFRAPTKGGDSVMEHPQTVLLSKVLQANISLGNAYNNDLQSSKVIVRLWMDLQQSI 408

Query: 3894 NVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG 3715
            N+LFDS+ A+ +    + GICQLLE+KEG+FRQKMMGKRVNFACRSVISPDPYLAVNEIG
Sbjct: 409  NLLFDSKTAMSQRRDVSPGICQLLERKEGMFRQKMMGKRVNFACRSVISPDPYLAVNEIG 468

Query: 3714 IPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISIS 3535
            IPPYFALRLTYPE+VTPWNV KLR AIING+E+HPGATHYVDK +  +LP +  +RISIS
Sbjct: 469  IPPYFALRLTYPERVTPWNVVKLREAIINGSELHPGATHYVDKLSTQRLPPNRKARISIS 528

Query: 3534 RKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGE 3355
            RKLPSSR  +T  GK+ + E+EGK+V RHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 529  RKLPSSRAAITQPGKNFDYEFEGKIVLRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGE 588

Query: 3354 KTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQ 3175
            KT+RMHY NCSTYNADFDGDE+NVHFPQDEISRAEA+NI NAN QYV P++G+P+R LIQ
Sbjct: 589  KTIRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVRPSNGEPLRALIQ 648

Query: 3174 DHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLP 2995
            DHI+SAVLLTK+DTFL+R+E++ LLY+S VS  A    +G   +K+   SS++ + P+LP
Sbjct: 649  DHIVSAVLLTKRDTFLSRDEFNQLLYSSGVSGLAQHHRLGKSGQKVLISSSEEGMLPILP 708

Query: 2994 AIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSREN----------- 2848
            AI KPKP+WTGKQVIT +LNHITRGRPPFTV+K G+ P+D+F   S EN           
Sbjct: 709  AILKPKPLWTGKQVITAVLNHITRGRPPFTVEKTGKTPRDFFKNRSNENKPKSVGQEGKD 768

Query: 2847 ------------KLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLF 2704
                        K+LI KN+ + GVIDKAQF  YGLVHTVQELYGS+TAG LLSVFSRLF
Sbjct: 769  AEENSNKEPDEEKILIYKNDLVRGVIDKAQFADYGLVHTVQELYGSNTAGFLLSVFSRLF 828

Query: 2703 TVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKND-HVEPGKLQR 2527
            TVFLQMHGFTCGVDDLLI    D+ERK+ LE  +K     H +F   K D  + P +LQ 
Sbjct: 829  TVFLQMHGFTCGVDDLLIMNDKDIERKKQLEECEKKVTEAHYEFCAVKVDTEIAPIELQL 888

Query: 2526 ETERIIRTKGESAAMSLDRMMSSALNRLTSE-VNNKLFPSGLLKTFPSNCLSLMTTTGAK 2350
            + E+ IR  GE+A  +LDR M S LN+ +S+ V  +L   GL+K    NC+SLMTTTGAK
Sbjct: 889  KIEKTIRRDGEAALTALDRTMISVLNKNSSQGVLTELLSEGLVKPMGRNCISLMTTTGAK 948

Query: 2349 GGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQE 2170
            G  VNF QISS LGQQELEGKRVPRMVSGKTLPCFHPWD  ARAGGFI+DRFL+GL PQE
Sbjct: 949  GSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGFISDRFLTGLRPQE 1008

Query: 2169 YYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDG 1990
            YYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LECLK+ YDHTVRDADGSIVQF YGEDG
Sbjct: 1009 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKISYDHTVRDADGSIVQFNYGEDG 1068

Query: 1989 VDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSL 1810
            +DVH+TSF+T+F+ LA N  ++ EKLS  + + +    DS    LPD L  KA  FI   
Sbjct: 1069 IDVHQTSFVTKFEALALNCDVMSEKLSSMLGEPY----DSG-KILPDDLRDKAVQFIKDN 1123

Query: 1809 SKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGR 1630
             ++K                       LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGR
Sbjct: 1124 RQQK------IKTKNFLKLLKLKFLSSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGR 1177

Query: 1629 GEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESM 1450
            GEMNVTLGIPRLQEIL  AS  I TPVMTCPL KG+T++DA RLA K+KK+ VA+I+ESM
Sbjct: 1178 GEMNVTLGIPRLQEILMTASIDIKTPVMTCPLHKGKTKEDALRLADKMKKITVAEILESM 1237

Query: 1449 EVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRH 1270
             VSV P+ + +  + +I                SDIT+ DC   L+V F+RELED+I  H
Sbjct: 1238 GVSVTPFAIHNGDICSIYKLKMRLGKPGRYLKNSDITVTDCQHILEVVFLRELEDAIQNH 1297

Query: 1269 LLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLG 1090
            L+ LS+IS IK     S                    ++             +  AEDLG
Sbjct: 1298 LVLLSRISGIKNFMPDSR-------PNASSETDEDVPESRSHETENDDDTDDEGRAEDLG 1350

Query: 1089 VDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPD----DDYTLG 922
            +DAQK+K+QA DEMDYEDG       +E E        G ESE D +E +    ++  +G
Sbjct: 1351 LDAQKQKQQATDEMDYEDG-------SEEEQNEGASLAGLESENDMSEDENGTIENNVIG 1403

Query: 921  GENE---------NVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKK 769
             +NE         N +D S++   E  T                   K+KK + + I+K+
Sbjct: 1404 SDNEKDDIFHGSPNAEDGSKLKSREGNTRAE---------------PKRKKMRGKFIRKE 1448

Query: 768  TDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID------ 607
            TDRAI    +GL FEVHF+F  EPHILL QIA+K A+ VY++S GKI++C V D      
Sbjct: 1449 TDRAIFSATKGLVFEVHFKFVNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQV 1508

Query: 606  -YEG-------------NIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEA 469
             Y G             NIPAL TAGV+F AFW ME  LDVR + SN+IHAMLNTYGVEA
Sbjct: 1509 FYYGEDPKQRKSPSGKANIPALHTAGVDFGAFWKMEGHLDVRYLYSNNIHAMLNTYGVEA 1568

Query: 468  ARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFE 289
            AR TI++E+  VF SYGI VNIRHLTLIAD+MT +G YR M+R+G      SP  KMSFE
Sbjct: 1569 ARETIISEISNVFTSYGIGVNIRHLTLIADFMTHSGRYRPMSRLGSIAECISPFSKMSFE 1628

Query: 288  TATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            TA++FIV+AA HG V+ LE+PS+R+ LGLP+KMGTG+F ++ N+++
Sbjct: 1629 TASKFIVDAAKHGLVDNLETPSSRICLGLPVKMGTGSFGLMQNVEI 1674


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score = 1743 bits (4514), Expect = 0.0
 Identities = 947/1727 (54%), Positives = 1166/1727 (67%), Gaps = 68/1727 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+ S++S+ FSF+TDEEVR+ SF KITNP LLD V RPV GGLYD ALG   +  +CK
Sbjct: 9    KGATESIDSISFSFLTDEEVRKHSFVKITNPRLLDLVERPVPGGLYDPALGPLSERTICK 68

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            +CGQ S  CPGHCGHIDLV P+YNPLLF  L  LL++TCF C HF +   +V+    QL+
Sbjct: 69   TCGQRSTNCPGHCGHIDLVSPVYNPLLFNFLHKLLQRTCFLCFHFRMQRGQVEKCIKQLE 128

Query: 4767 LILKGDIVGAENLGTSFSKD----EEND---EGDTRFHTDVCRSTTEDLVKHEWTSLQYS 4609
            LI+KGDIVGA+ L +    +    EE+D   E     H+ V  +  E   +  WTSLQ++
Sbjct: 129  LIVKGDIVGAKRLESVSPSEALYPEESDLSHESCPTIHSGVQCNDGEHTRQQGWTSLQFT 188

Query: 4608 LARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLI 4429
             A SVL+ F+K  +++C  C +    I  PTFGW     + ++++RANVI G +L   L 
Sbjct: 189  EAMSVLNNFLKPKFKKCKNCESSNPNITKPTFGWFHTSGMSDASIRANVITGHQLGGLLG 248

Query: 4428 DEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPEFF 4249
             E E     G  + +D +E        P  + SG           + HK  +     EF 
Sbjct: 249  SEIE-----GTTDVEDAAE--------PGDQHSGT----------KKHKKKERKEVLEFT 285

Query: 4248 KQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSY-SMFFIEALL 4072
            +QK  F    LP+EVK  L+ LW+NEA +C+ I D+Q++     G+ K+  +MFF+E +L
Sbjct: 286  RQKSTFSKQLLPSEVKEKLELLWKNEARICSFISDLQQQEF---GKRKAGPAMFFLETIL 342

Query: 4071 VPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAVN 3892
            VPP +FRPP K G  V+ HPQ+VLLSKV+QSNISL +A++N  E SK+V RW+DLQ ++N
Sbjct: 343  VPPIKFRPPTKGGDSVMEHPQTVLLSKVLQSNISLGDAHINK-EHSKIVRRWLDLQQSIN 401

Query: 3891 VLFDSRKAIRKADKE-TDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIG 3715
             LFDS+ A     +E   GICQLLEKKEG+FRQKMMGKRVN+ACRSVISPDPY+ VNEIG
Sbjct: 402  TLFDSKTAKGPGQREGAPGICQLLEKKEGLFRQKMMGKRVNYACRSVISPDPYIGVNEIG 461

Query: 3714 IPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISIS 3535
            IPP FA++LTYPE+VTPWN+ KLR+A+ING+E HPGATHYVDK ++ KLP +  +RISIS
Sbjct: 462  IPPCFAVKLTYPERVTPWNIAKLRNAVINGSECHPGATHYVDKLSINKLPPARKARISIS 521

Query: 3534 RKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGE 3355
            RKLPSSRG VT  GK  E E+EGK+VYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL GE
Sbjct: 522  RKLPSSRGAVTQAGKGSECEFEGKIVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGE 581

Query: 3354 KTLRMHYVNCS-TYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            KTLRMHY NCS TYNADFDGDEMNVHFPQDE+SRAEA+NI NAN Q+V P++G+P+RGLI
Sbjct: 582  KTLRMHYANCSITYNADFDGDEMNVHFPQDEVSRAEAYNIVNANNQFVRPSNGEPLRGLI 641

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLL 2998
            QDHI+SAVLLTKKDTFL+++E++ LLY+S VS     S  G   +K+    S+DEI  L 
Sbjct: 642  QDHIVSAVLLTKKDTFLSQDEFNQLLYSSGVSTVGPNSFHGRPGQKVLWSRSEDEIQTLP 701

Query: 2997 PAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYF----------------- 2869
            PAIWKPKP+WTGKQVIT ILNHIT   PPFTV+KD +IP ++F                 
Sbjct: 702  PAIWKPKPLWTGKQVITAILNHITSDHPPFTVEKDAKIPSNFFKSRANEDKPCQEEKSDK 761

Query: 2868 ----GKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFT 2701
                 K   E K+L+ KNE + GVIDK QFG+YGLVHTV EL GS TAGILLSV SRLFT
Sbjct: 762  DAPAEKEPDEEKMLVYKNELVRGVIDKGQFGEYGLVHTVHELLGSHTAGILLSVLSRLFT 821

Query: 2700 VFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKND--HVEPGKLQR 2527
             +LQMHGFTCGVDDLLI  + D ERK+ LE  +K GE VH  FIG K++   ++P  +Q 
Sbjct: 822  AYLQMHGFTCGVDDLLILTNKDEERKKQLEWCEKSGEAVHRNFIGIKDEKIKIDPVAMQL 881

Query: 2526 ETERIIRTKGESAAMSLDRMMSSALNRLTSE-VNNKLFPSGLLKTFPSNCLSLMTTTGAK 2350
              E+ IR+ G+SA   LDR MS+ LN  TS  V + L   GLLK    NC+SLMTT+GAK
Sbjct: 882  NIEKTIRSDGDSALAYLDRQMSNELNTKTSSGVISNLLSDGLLKPSGKNCISLMTTSGAK 941

Query: 2349 GGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQE 2170
            G  VNF QISS LGQQELEGKRVPRMVSGKTLPCFHPWD  AR+GG+I DRFL+GL PQE
Sbjct: 942  GSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARSGGYITDRFLTGLRPQE 1001

Query: 2169 YYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDG 1990
            YYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LECLK+ YDHTVRDADGS+VQF YGEDG
Sbjct: 1002 YYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLKIGYDHTVRDADGSVVQFYYGEDG 1061

Query: 1989 VDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSL 1810
            VDVH+TSFI +FK LA NQ ++ ++  G      L   +SYI++LP+AL+ KA  F+   
Sbjct: 1062 VDVHQTSFIAKFKELALNQDMIYKRSGG-----QLGAFNSYISELPEALKEKADRFLDDF 1116

Query: 1809 SKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGR 1630
            S   R   +                  LAQPGE VGVLAAQSVGEPSTQMTLNTFH AGR
Sbjct: 1117 SIMGRIASNLVKREDLYNLMKQKFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGR 1176

Query: 1629 GEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESM 1450
            GEMNVTLGIPRLQEIL  AS  I TP+MTCPL++GRT +DA+ LA KL+KV VADI+ESM
Sbjct: 1177 GEMNVTLGIPRLQEILMTASIDIKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESM 1236

Query: 1449 EVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRH 1270
            EVSVVP+ +QD  V  I               Y++I++ED   TL+V F+RELED+I  H
Sbjct: 1237 EVSVVPFAIQDGGVCRIYKLKMKLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNH 1296

Query: 1269 LLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLG 1090
            +  LS+IS IK    +S                     + +E             A+DLG
Sbjct: 1297 MFLLSRISGIKDFLPESR-----SRASGEADEDVAGDMSHREERDDDNDDDDGERADDLG 1351

Query: 1089 VDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENE 910
            +DAQKRK QA DEMDY+DG + E+   E E    E   GFESEIDQ          G+NE
Sbjct: 1352 LDAQKRKLQATDEMDYDDGFEEEL--NEGESTASEEESGFESEIDQ----------GDNE 1399

Query: 909  NVDDQSQIFDAE-DET--------XXXXXXXXXXXXXSEDNLAKQKKPKAR---LIKKKT 766
                   + D E  ET                      E +  K+KKPKA+    I K  
Sbjct: 1400 TEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRISKDF 1459

Query: 765  DRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID------- 607
            DRAI V+AR ++FEVHF+F  EPHILL +IAQK A+ VY+++ GKI +C V D       
Sbjct: 1460 DRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKESQVI 1519

Query: 606  YEG---------------NIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVE 472
            Y G                +PAL   GV+F  FW M+D LDVR + SN+IHAML TYGVE
Sbjct: 1520 YYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKTYGVE 1579

Query: 471  AARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSF 292
            AAR TI+ E+  VF SYGI+V+ RHL+LIAD+MT  GGYR M+R+G    S SP  KMSF
Sbjct: 1580 AARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFSKMSF 1639

Query: 291  ETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            ETA++FIVEAALHGE++ LE+PSAR+ LGLP+KMGTG+FD++  L++
Sbjct: 1640 ETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKLEI 1686


>ref|XP_010036456.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X2
            [Eucalyptus grandis]
          Length = 1669

 Score = 1729 bits (4479), Expect = 0.0
 Identities = 938/1724 (54%), Positives = 1163/1724 (67%), Gaps = 65/1724 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +G S  VESV F F+TDEEVR+ S  K+TN +LLD+V RPV GGLYD A+G+  D   CK
Sbjct: 5    EGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTACK 64

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S+ CPGHCGHIDLV P+YNPLLF  L +LLK+TCF+C HF  S ++V    S+L+
Sbjct: 65   SCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSKLE 124

Query: 4767 LILKGDIVGAENL----GTSFSKDEENDEGDTRFHT---DVCRSTTEDLVKHEWTSLQYS 4609
            LI KGD+ GA+ L     T+ S  E ++ GD    T   D+   +     + EWTSLQ++
Sbjct: 125  LIAKGDVAGAKELDSKWATNSSLREASNGGDVSCSTVRSDLQHDSPVHQKQGEWTSLQFN 184

Query: 4608 LARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLI 4429
             A SVL+ F+K  Y++C  C AK  KI  PTFGW     +  +  R N+IRG K+D   +
Sbjct: 185  EAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRGNKMDGPFL 244

Query: 4428 D-EAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEH-LPPE 4255
            D + E + + G   Q DG         + + + S   + +  GI+ +  K  K H L  E
Sbjct: 245  DGDGEMESLEGAFLQDDGGN-------EAETQSSTFASPDGIGIAKKGQKKRKGHSLSDE 297

Query: 4254 FFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEAL 4075
            + KQK +F GP LP+EVK ++K LWENEA LC+ I D+Q++    SG + ++SMFF+  +
Sbjct: 298  YIKQKNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFLGTV 354

Query: 4074 LVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            LVPP +FRPP K G  V+ HP +VLL+KV+Q+NISL NA+ +N  R+ ++ RWMDLQ ++
Sbjct: 355  LVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQQSI 412

Query: 3894 NVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            N+LFDS+ A  +  ++   GICQLLEKKEG+FRQ MMGKRVN+ACRSVISPDPYLAVNEI
Sbjct: 413  NLLFDSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEI 472

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            GIPPYFALRLTYPE+VTPWN   LR AIING + HPGATHY+DK + +KLP +   RISI
Sbjct: 473  GIPPYFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISI 532

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SR+LPSSRGVVT  G+S ++E EGK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 533  SRRLPSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKG 592

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKTLRMHY NCSTYNADFDGDEMNVHFPQD+ISRAEA+NI NAN QYV PT+G PIR LI
Sbjct: 593  EKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALI 652

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTK--KICTISSDDEITP 3004
            QDHI+SA +LTKKDTFL  +E++HLLY+S VS     +  G+F K  K   I+ +D +  
Sbjct: 653  QDHIVSAAILTKKDTFLNYDEFNHLLYSSGVSA----AGSGSFRKLGKKVAINFEDNLLS 708

Query: 3003 LLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR---------- 2854
             +PAIWKP+P+WTGKQ+I  +L+H+TRG PPFTV+K G+IP D+F +  +          
Sbjct: 709  PVPAIWKPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTN 768

Query: 2853 ------------ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSR 2710
                        E+ +LI KN  I GVIDKAQFG YGLVHT QELYGS+ AGILLS FSR
Sbjct: 769  KDKERERNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSR 828

Query: 2709 LFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQ 2530
            LFT FLQ+HGFTCGVDDLL++K  D +R++ LE  +  GE VH + +G  ND ++P +LQ
Sbjct: 829  LFTAFLQLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVG-VNDFIDPAELQ 887

Query: 2529 RETERIIRTKGESAAMSLDRMMSSALNRLTS-EVNNKLFPSGLLKTFPSNCLSLMTTTGA 2353
             + E +IR+ G+SA  +LDR M S LN L+S ++   L   GL K    NC+SLMTT+GA
Sbjct: 888  LKIEEVIRSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGA 947

Query: 2352 KGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQ 2173
            KGG  NF QISS LGQQELEG+RVPRMVSGKTLPCF PWD  +RAGGFI DRFL+GL PQ
Sbjct: 948  KGGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQ 1007

Query: 2172 EYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGED 1993
            EYYFHCMAGR+GLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRDADGSIVQF YGED
Sbjct: 1008 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGED 1067

Query: 1992 GVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI-- 1819
            G+DVHKTSF+ +F  L  N  I+  K S       L KS+SYI DLP+AL+ KA  FI  
Sbjct: 1068 GIDVHKTSFVAKFDALLANHDIMKAKYS-----TELRKSNSYITDLPEALKDKANKFICD 1122

Query: 1818 GSLSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHF 1639
             +LS  +                       LAQPGE VG++AAQSVGEPSTQMTLNTFH 
Sbjct: 1123 RNLSVPRLARNEILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHH 1182

Query: 1638 AGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADII 1459
            AGRGEMNVTLGIPRLQEIL  AS  I TP+MTCPL +GR++ DA  LA KLKK+ VA++I
Sbjct: 1183 AGRGEMNVTLGIPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMI 1242

Query: 1458 ESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSI 1279
            ESMEV+VVP+ V + QV +I                   +++ C   L+V ++RELED+I
Sbjct: 1243 ESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKV------FSVKHCEEILEVVYLRELEDAI 1296

Query: 1278 HRHLLTLSKISTIKIIA------DKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXX 1117
              HLL LSKIS IK         D S   ++                 G +         
Sbjct: 1297 QNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDGNDN-------- 1348

Query: 1116 XDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDD 937
                 +DLG D QKRKRQA DEM+YEDG        E E    E S G ES+ DQA   +
Sbjct: 1349 -----DDLGFDGQKRKRQATDEMEYEDGY-------EEERNEPELSAGLESDGDQA---N 1393

Query: 936  DYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRA 757
            D  +G + +     +    +  +T             S+D   K+ + K   + K+ DRA
Sbjct: 1394 DVDIGEDGDGPPGIAPEIVSPSKT-----KKSKKNAKSDDEGKKRVRTK---VIKEFDRA 1445

Query: 756  ILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGN------ 595
            I V A GL+FEVHFRF  EPH+LL QIAQK A+ VY++SSGKI  C VI  + N      
Sbjct: 1446 IFVAANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYG 1505

Query: 594  ----------------IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAAR 463
                            IPA+ T G +F A W M+D LD+R + SNDIHAML TYGVEAAR
Sbjct: 1506 EDPKRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAAR 1565

Query: 462  ATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETA 283
             TI+ EV+ VFGSYGISV++RHLTLIAD+MT AGGYR MNR+G    S SP  KMSFETA
Sbjct: 1566 ETIIREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETA 1625

Query: 282  TRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            ++FIV+AA HG V+ LE+PSAR+ LGLP+KMGTG+FD+L  +++
Sbjct: 1626 SKFIVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKIEL 1669


>ref|XP_010036455.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 isoform X1
            [Eucalyptus grandis]
          Length = 1669

 Score = 1729 bits (4479), Expect = 0.0
 Identities = 938/1724 (54%), Positives = 1163/1724 (67%), Gaps = 65/1724 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +G S  VESV F F+TDEEVR+ S  K+TN +LLD+V RPV GGLYD A+G+  D   CK
Sbjct: 5    EGVSEFVESVRFGFLTDEEVRKQSCVKVTNTVLLDNVERPVAGGLYDPAMGTLNDTTACK 64

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S+ CPGHCGHIDLV P+YNPLLF  L +LLK+TCF+C HF  S ++V    S+L+
Sbjct: 65   SCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESRSQVDACVSKLE 124

Query: 4767 LILKGDIVGAENL----GTSFSKDEENDEGDTRFHT---DVCRSTTEDLVKHEWTSLQYS 4609
            LI KGD+ GA+ L     T+ S  E ++ GD    T   D+   +     + EWTSLQ++
Sbjct: 125  LIAKGDVAGAKELDSKWATNSSLREASNGGDVSCSTVRSDLQHDSPVHQKQGEWTSLQFN 184

Query: 4608 LARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLI 4429
             A SVL+ F+K  Y++C  C AK  KI  PTFGW     +  +  R N+IRG K+D   +
Sbjct: 185  EAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNIIRGNKMDGPFL 244

Query: 4428 D-EAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEH-LPPE 4255
            D + E + + G   Q DG         + + + S   + +  GI+ +  K  K H L  E
Sbjct: 245  DGDGEMESLEGAFLQDDGGN-------EAETQSSTFASPDGIGIAKKGQKKRKGHSLSDE 297

Query: 4254 FFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEAL 4075
            + KQK +F GP LP+EVK ++K LWENEA LC+ I D+Q++    SG + ++SMFF+  +
Sbjct: 298  YIKQKNFFSGPLLPSEVKEIMKLLWENEAPLCSFISDIQQQG---SGNSATHSMFFLGTV 354

Query: 4074 LVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            LVPP +FRPP K G  V+ HP +VLL+KV+Q+NISL NA+ +N  R+ ++ RWMDLQ ++
Sbjct: 355  LVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATIISRWMDLQQSI 412

Query: 3894 NVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            N+LFDS+ A  +  ++   GICQLLEKKEG+FRQ MMGKRVN+ACRSVISPDPYLAVNEI
Sbjct: 413  NLLFDSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEI 472

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            GIPPYFALRLTYPE+VTPWN   LR AIING + HPGATHY+DK + +KLP +   RISI
Sbjct: 473  GIPPYFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLKLPPARKGRISI 532

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SR+LPSSRGVVT  G+S ++E EGK+VYRHL+DGDIVLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 533  SRRLPSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKG 592

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKTLRMHY NCSTYNADFDGDEMNVHFPQD+ISRAEA+NI NAN QYV PT+G PIR LI
Sbjct: 593  EKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALI 652

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTK--KICTISSDDEITP 3004
            QDHI+SA +LTKKDTFL  +E++HLLY+S VS     +  G+F K  K   I+ +D +  
Sbjct: 653  QDHIVSAAILTKKDTFLNYDEFNHLLYSSGVSA----AGSGSFRKLGKKVAINFEDNLLS 708

Query: 3003 LLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR---------- 2854
             +PAIWKP+P+WTGKQ+I  +L+H+TRG PPFTV+K G+IP D+F +  +          
Sbjct: 709  PVPAIWKPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKLKHKPSKRKGTN 768

Query: 2853 ------------ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSR 2710
                        E+ +LI KN  I GVIDKAQFG YGLVHT QELYGS+ AGILLS FSR
Sbjct: 769  KDKERERNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSNAAGILLSAFSR 828

Query: 2709 LFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQ 2530
            LFT FLQ+HGFTCGVDDLL++K  D +R++ LE  +  GE VH + +G  ND ++P +LQ
Sbjct: 829  LFTAFLQLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVG-VNDFIDPAELQ 887

Query: 2529 RETERIIRTKGESAAMSLDRMMSSALNRLTS-EVNNKLFPSGLLKTFPSNCLSLMTTTGA 2353
             + E +IR+ G+SA  +LDR M S LN L+S ++   L   GL K    NC+SLMTT+GA
Sbjct: 888  LKIEEVIRSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGKNCISLMTTSGA 947

Query: 2352 KGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQ 2173
            KGG  NF QISS LGQQELEG+RVPRMVSGKTLPCF PWD  +RAGGFI DRFL+GL PQ
Sbjct: 948  KGGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFIIDRFLTGLRPQ 1007

Query: 2172 EYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGED 1993
            EYYFHCMAGR+GLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRDADGSIVQF YGED
Sbjct: 1008 EYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDADGSIVQFYYGED 1067

Query: 1992 GVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI-- 1819
            G+DVHKTSF+ +F  L  N  I+  K S       L KS+SYI DLP+AL+ KA  FI  
Sbjct: 1068 GIDVHKTSFVAKFDALLANHDIMKAKYS-----TELRKSNSYITDLPEALKDKANKFICD 1122

Query: 1818 GSLSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHF 1639
             +LS  +                       LAQPGE VG++AAQSVGEPSTQMTLNTFH 
Sbjct: 1123 RNLSVPRLARNEILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEPSTQMTLNTFHH 1182

Query: 1638 AGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADII 1459
            AGRGEMNVTLGIPRLQEIL  AS  I TP+MTCPL +GR++ DA  LA KLKK+ VA++I
Sbjct: 1183 AGRGEMNVTLGIPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAEKLKKITVAEMI 1242

Query: 1458 ESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSI 1279
            ESMEV+VVP+ V + QV +I                   +++ C   L+V ++RELED+I
Sbjct: 1243 ESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKV------FSVKHCEEILEVVYLRELEDAI 1296

Query: 1278 HRHLLTLSKISTIKIIA------DKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXX 1117
              HLL LSKIS IK         D S   ++                 G +         
Sbjct: 1297 QNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDGNDN-------- 1348

Query: 1116 XDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDD 937
                 +DLG D QKRKRQA DEM+YEDG        E E    E S G ES+ DQA   +
Sbjct: 1349 -----DDLGFDGQKRKRQATDEMEYEDGY-------EEERNEPELSAGLESDGDQA---N 1393

Query: 936  DYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRA 757
            D  +G + +     +    +  +T             S+D   K+ + K   + K+ DRA
Sbjct: 1394 DVDIGEDGDGPPGIAPEIVSPSKT-----KKSKKNAKSDDEGKKRVRTK---VIKEFDRA 1445

Query: 756  ILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGN------ 595
            I V A GL+FEVHFRF  EPH+LL QIAQK A+ VY++SSGKI  C VI  + N      
Sbjct: 1446 IFVAANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVITCKENQVIYYG 1505

Query: 594  ----------------IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAAR 463
                            IPA+ T G +F A W M+D LD+R + SNDIHAML TYGVEAAR
Sbjct: 1506 EDPKRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHAMLTTYGVEAAR 1565

Query: 462  ATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETA 283
             TI+ EV+ VFGSYGISV++RHLTLIAD+MT AGGYR MNR+G    S SP  KMSFETA
Sbjct: 1566 ETIIREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESISPFSKMSFETA 1625

Query: 282  TRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            ++FIV+AA HG V+ LE+PSAR+ LGLP+KMGTG+FD+L  +++
Sbjct: 1626 SKFIVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKIEL 1669


>emb|CDP10074.1| unnamed protein product [Coffea canephora]
          Length = 1680

 Score = 1695 bits (4389), Expect = 0.0
 Identities = 915/1714 (53%), Positives = 1145/1714 (66%), Gaps = 58/1714 (3%)
 Frame = -2

Query: 5124 GASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCKS 4945
            GAS +VE V FSFMT EEVR+ S  KI NP+LLD+V RP+ GGLYD A+G F +   CKS
Sbjct: 8    GASEAVEKVLFSFMTSEEVRKHSVVKIKNPVLLDTVGRPMPGGLYDPAMGPFDEQSPCKS 67

Query: 4944 CGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLDL 4765
            CGQ S+ C GHCGHI+LV P YNPLLF +L +LL++TCFYC HF  S  +V     QL+ 
Sbjct: 68   CGQRSFHCTGHCGHIELVSPAYNPLLFNMLYNLLQRTCFYCFHFRSSTEEVDKCVLQLER 127

Query: 4764 ILKGDIVGAENLGTSFSKDEENDEGDTRFHT---DVCRSTTEDLVKHEWTSLQYSLARSV 4594
            I KGD++GA+ L  + S D +N E     H    +V     E + +  W S Q++ A SV
Sbjct: 128  IAKGDVIGAKRLDAASSADLDNSEDSEGSHVSCGNVYHGAEEHMKQPSWDSFQFTEAMSV 187

Query: 4593 LDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLIDEAEK 4414
            L+ F+K    +CG+C AK  KIK PTFGW     + N+  RAN+IRG +LD         
Sbjct: 188  LNMFLKPKLSKCGKCEAKNPKIKKPTFGWFHMV-VSNAETRANIIRGHRLDGFR------ 240

Query: 4413 QPVSGLEEQKDGSEYTSG--SVEQPDAELSGATAKEM--PGISMEAHK---NIKEHLPPE 4255
               SG  E++  SE  +   S+ + D++ +G TA      GI     K   N    +  E
Sbjct: 241  ---SGGSEERSSSEVVNANDSLWEDDSQ-TGKTASYTVSDGIDTPVAKKSPNQPGRVGEE 296

Query: 4254 FFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEAL 4075
              KQKE F    LP+EV+ ++KRLWENEA LC+ I D+QR+  + +     YSMFF++++
Sbjct: 297  LKKQKEAFSEHLLPSEVRDVVKRLWENEAPLCSFICDLQREQHNSAAGIAGYSMFFLDSI 356

Query: 4074 LVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAV 3895
            LVPP +FRP  + G  V+ HP + LLSKV+QSNI+L NAY+NN+ER K+V RWMDLQ ++
Sbjct: 357  LVPPIKFRPLARTGDAVMEHPHTNLLSKVLQSNIALGNAYINNAERYKIVNRWMDLQQSI 416

Query: 3894 NVLFDSRKAIRKADKETD-GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            +VL+DS+    ++ K    GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 417  SVLYDSKTTTGQSQKAGPVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 476

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            G+PPYFALRLTYPE+VTPWNV KLR AI+NG E+HPGA  Y DK + +KLP+S   RI+I
Sbjct: 477  GVPPYFALRLTYPERVTPWNVGKLRGAIVNGPEIHPGALSYTDKVSTVKLPSSKKMRIAI 536

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SRKLPSSRGVVT  GK+ E E+EGKVVYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL G
Sbjct: 537  SRKLPSSRGVVTQLGKNSEHEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKG 596

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKTLRMHY NCS+YNADFDGDEMNVHFPQDEISRAEA+NI NAN+QY+VPT GD +RGLI
Sbjct: 597  EKTLRMHYANCSSYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTRGDTVRGLI 656

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLL 2998
            QDHI SAVLLT KDTFLT +E++ LLY S V  T    +  N++ KI  + S+  I P+L
Sbjct: 657  QDHIGSAVLLTMKDTFLTYDEFNQLLYGSGVFTTGSSCTFSNYSGKISIVDSEGIIQPIL 716

Query: 2997 PAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYF----------------- 2869
            PA+ KPKP+WTGKQVIT +LN +T+G  P +++K+ +IP+ YF                 
Sbjct: 717  PAVLKPKPLWTGKQVITALLNQLTKGCAPCSIEKEMKIPKQYFPTETYEVQQSENDDKEN 776

Query: 2868 GKNSRENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQ 2689
             +   +N LL+ KNE + GVIDKAQFG++GLVH++QELYG++TAG+LLS  SRLFT+FLQ
Sbjct: 777  DEKKADNCLLVWKNELVRGVIDKAQFGQFGLVHSIQELYGANTAGLLLSALSRLFTMFLQ 836

Query: 2688 MHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERII 2509
            MHGFTCGV+DL+I  H+D+ RK  LE  D +GE VH +F+  K   + P +LQ E E++I
Sbjct: 837  MHGFTCGVEDLIILPHFDLRRKEELEGED-VGEDVHCEFVNFKRGQIGPLELQLEIEKVI 895

Query: 2508 RTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFT 2329
                E+A  SLD  M + L +  S+++ +L   GLLK FP NC+SLMT +GAKG  VNF 
Sbjct: 896  CRDREAATASLDMKMKNKLTKKASQISKELLLKGLLKPFPKNCISLMTISGAKGSTVNFQ 955

Query: 2328 QISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMA 2149
            QISS LGQQELEGKRVPRMVSGKTLPCF PWD T+RAGG+I DRFLSGL PQEYYFHCMA
Sbjct: 956  QISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFTSRAGGYITDRFLSGLRPQEYYFHCMA 1015

Query: 2148 GRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTS 1969
            GR+GLVDTA+KTSRSGYLQRCL+K LE LKVCYD+TVRDADGSIVQF YGEDGVDVH+TS
Sbjct: 1016 GREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIVQFYYGEDGVDVHRTS 1075

Query: 1968 FITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDI 1789
            F+   + LA NQ  V +K     +       ++YI +LPD L+ KA+ F+  ++      
Sbjct: 1076 FLKNLRALALNQVPVRQKYERERD------FNAYIVELPDGLKRKAEGFLKGVNTDSH-- 1127

Query: 1788 LHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTL 1609
                                LA  GE VGV+AAQSVGEPSTQMTLNTFH AGRGEMNVTL
Sbjct: 1128 ------MDFMTLLAQKYLSSLAPSGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTL 1181

Query: 1608 GIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPY 1429
            GIPRLQEIL  A+  I TPVMTCP  + ++ DDA+ L AK+KK+ VADIIESMEV ++P 
Sbjct: 1182 GIPRLQEILMTAAQVIKTPVMTCPFLQFKSMDDAKSLVAKVKKITVADIIESMEVHLLPL 1241

Query: 1428 FVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKI 1249
             V +  +  I                   + EDC  TL+  F+RELED+I  HL+ LS+I
Sbjct: 1242 SVLNNGIGIIYKLMMTFKHHEF------ASSEDCKETLRHSFLRELEDAIQNHLVLLSRI 1295

Query: 1248 STIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRK 1069
            S IK I   +   ++              ++   E          D +AEDLG DAQKRK
Sbjct: 1296 SGIKNIMSNTR--SKGNETDEDASGVTSHEEGDDENDDGDGGKGNDDMAEDLGSDAQKRK 1353

Query: 1068 RQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVDDQSQ 889
            +QA DEMDYED  ++E   T +   GK+     E EI +         G E  +VDD+  
Sbjct: 1354 QQATDEMDYEDITEDES--TADHEQGKDGQSNDEGEIRE---------GKEAMDVDDEHA 1402

Query: 888  IFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRF 709
            I    D                +  L K+KK + + ++K+TDR I V+  G  FE HF F
Sbjct: 1403 IEMEHDN--EEMSKPKSGNKNGKSTLKKRKKAEKKFVRKETDRNIFVEVEGQKFEAHFGF 1460

Query: 708  KQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYE------------------------ 601
              EPHILL QIAQK A++VY+KSSGKIN+C +++++                        
Sbjct: 1461 TNEPHILLAQIAQKTAKHVYIKSSGKINQCKMVEHDVSENTVIWDAKKVDKKIKAKKQMK 1520

Query: 600  GNIP------ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVK 439
             N+       AL+ AGV+F  FW M+DDLD  ++ SN IHAML TYGVEAARATI+ EV 
Sbjct: 1521 ANVDDLLPYWALKAAGVDFIPFWEMQDDLDTARIYSNSIHAMLETYGVEAARATIIREVT 1580

Query: 438  AVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAA 259
             VFG YG+ ++ RHL+LIADYMT +GGYR M+R G    S SP+ KMSFETA +FIVEAA
Sbjct: 1581 NVFGIYGVQIDYRHLSLIADYMTHSGGYRPMSRHGSIAESLSPLAKMSFETAGKFIVEAA 1640

Query: 258  LHGEVERLESPSARVALGLPIKMGTGAFDVLHNL 157
             HG  + LE+PS+R+ LGLP+KMGTG FD++  L
Sbjct: 1641 SHGMTDNLETPSSRICLGLPVKMGTGCFDLMQQL 1674


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score = 1693 bits (4385), Expect = 0.0
 Identities = 928/1712 (54%), Positives = 1139/1712 (66%), Gaps = 53/1712 (3%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+ SVE+V FSF+TD+E+RR S  KIT+P+L+D +L PV  GLYD ALG F D  LCK
Sbjct: 6    EGATNSVEAVAFSFLTDDEIRRSSRVKITSPILVDFLLHPVPDGLYDAALGPFDDKSLCK 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQ S  CPGH GHI+LV P+YNPL+F +L ++L++TCF CHHF     +V    SQL+
Sbjct: 66   SCGQTSKHCPGHFGHIELVSPVYNPLMFNILSNILQRTCFTCHHFRAPSKEVDIRTSQLE 125

Query: 4767 LILKGDIVGAENLGT--------SFSKDEENDEGDTRFHTDVCRSTTEDLVKHEWTSLQY 4612
            LI+KGDI+ A+ L +        SF+ DE    GD     D  +  + + +   WTSLQ+
Sbjct: 126  LIMKGDIIRAKRLESIIPGKSVDSFNPDESIHPGDG----DESQCYSAEQLGENWTSLQF 181

Query: 4611 SLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSL 4432
            S A SVL   + + +++C +CGAK  KI  PTFGW     +     RA+ IR V      
Sbjct: 182  SEAMSVLRKLLTKKHKKCQKCGAKNPKISKPTFGWFHMNVLSADETRADTIRSV------ 235

Query: 4431 IDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAE--LSGATAKEMPGISMEAHKNIKEHLPP 4258
                        E +    + + G  +  D E   S  TAK          K  KE L  
Sbjct: 236  ------------ESETTNDDISLGGGDTTDVEDITSAGTAKR--------DKRKKEKLSY 275

Query: 4257 EFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEA 4078
            +  +Q +   G  LP++VK +L+ LWENEA LC+ I D+Q +     G+   +SMFF+E 
Sbjct: 276  KLAEQNK-LSGSLLPSQVKGILELLWENEARLCSYINDIQDQGF---GKKAGHSMFFLEN 331

Query: 4077 LLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLA 3898
            + VPP +FRPP K G  V+ HPQ+VLL+KV+Q NISL +A++N S+ SK++ RWMDLQ +
Sbjct: 332  IFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLQCNISLGDAHLNKSDPSKVLSRWMDLQQS 391

Query: 3897 VNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 3718
            VN+LFD++ A  K D  T GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI
Sbjct: 392  VNMLFDNKTASGKRDVAT-GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEI 450

Query: 3717 GIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISI 3538
            GIPPYFALRL+YPE+VTPWNV KLR+AI+NG E HPGATHY DK +++KLP         
Sbjct: 451  GIPPYFALRLSYPERVTPWNVVKLRNAILNGPESHPGATHYADKVSIVKLPPKGKLLSLT 510

Query: 3537 SRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAG 3358
            SRKLP+SRGV+ H GK  + E+EGKVVYRHL+DGD+VLVNRQPTLHKPS+MAH+VRVL G
Sbjct: 511  SRKLPTSRGVILHQGKISDHEFEGKVVYRHLKDGDVVLVNRQPTLHKPSIMAHIVRVLKG 570

Query: 3357 EKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLI 3178
            EKT+RMHY NCSTYNADFDGDE+NVHFPQDEISRAEA+NI NAN QYV PTSGDPIR LI
Sbjct: 571  EKTVRMHYANCSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALI 630

Query: 3177 QDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLL 2998
            QDHI+SA LLTKKDTFL+ EE++ LLY+S VS+  L S  G   +K+   +S+ E+    
Sbjct: 631  QDHIVSAALLTKKDTFLSYEEFNQLLYSSGVSMAGLGSFYGKHGQKVFISNSESEMFLFP 690

Query: 2997 PAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR------------ 2854
            PAIWKP+P+WTGKQVI+ +L +ITRG PPFT +K+ +IP ++F    R            
Sbjct: 691  PAIWKPEPLWTGKQVISALLYYITRGSPPFTAEKNAKIPSNFFKTQIRKGKRYTEDTSKK 750

Query: 2853 -----ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQ 2689
                 E+KLLI KN+ + GV+DKAQFG YG++HTVQELYGS+ AG LLS  SRLFT FLQ
Sbjct: 751  KDKPDEDKLLIYKNDLVRGVVDKAQFGDYGMIHTVQELYGSNVAGNLLSALSRLFTTFLQ 810

Query: 2688 MHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERI 2512
            MHGFTCGVDDL++ +  D+ER   L+S + IG+ VH +FIG KN D+++P  LQ   E+ 
Sbjct: 811  MHGFTCGVDDLMLTEGKDVERMNQLKSCEIIGDSVHREFIGVKNSDNIDPVTLQLNIEKK 870

Query: 2511 IRTKGESAAMSLDRMMSSALN-RLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVN 2335
            IR+ GE AA++LDR M+S LN R +S +  KL   G+LK    NC+SLMTT+GAKG +VN
Sbjct: 871  IRSNGE-AALTLDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNCISLMTTSGAKGSMVN 929

Query: 2334 FTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHC 2155
            F QISS LGQQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFL+ L PQEYYFHC
Sbjct: 930  FQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIIDRFLTALHPQEYYFHC 989

Query: 2154 MAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHK 1975
            MAGR+GLVDTA+KTSRSGYLQRCL+K LECLKVCYDHTVRDADGSI+QF YGEDGVDVH+
Sbjct: 990  MAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHQ 1049

Query: 1974 TSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKR 1795
            TSFIT+F  L+TN+++V            L +S  YIN LP+ALE KA+ F       K+
Sbjct: 1050 TSFITEFGALSTNKELVFSNYC-----RQLDRSSPYINKLPEALEGKAEKF------SKQ 1098

Query: 1794 DILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNV 1615
              L                   LAQPGE VGVLA+QSVGEP+TQMTLNTFH AGRGEMNV
Sbjct: 1099 RNLGSMEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNV 1158

Query: 1614 TLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVV 1435
            TLGIPRLQEIL  A+  I TP MTCPLR  ++  DA  LA KLKK+ VADII+SM+VSVV
Sbjct: 1159 TLGIPRLQEILMAAARDIKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVV 1218

Query: 1434 PYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLS 1255
            P  V   QV +I               Y+DITL+D   TL+V FVRELED+I  H+  LS
Sbjct: 1219 PVTVLGGQVCSIYKLVMKLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLS 1278

Query: 1254 KISTIKIIA--DKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDA 1081
            KIS IK      +S +                  Q   +              EDLG DA
Sbjct: 1279 KISGIKKFKTDPQSNYSNSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDA 1338

Query: 1080 QKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTLGGENENVD 901
            QKRK Q  DE+DYEDG +      E  H G+        EI+  E   D        NV 
Sbjct: 1339 QKRKLQGTDEVDYEDGPE------EETHDGE-----LSEEIEGDEDGSDVDANENYNNVT 1387

Query: 900  DQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEV 721
            D +     E  +              + NL ++KK K+    KK DRAI V+A+G +FE+
Sbjct: 1388 DANNSEGLEKPS-------KSKTIDEKQNLKREKK-KSEPTTKKYDRAIFVEAKGKHFEI 1439

Query: 720  HFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG------------ 598
            HFRF  EPHILLTQIAQ+ A+ V +++ GK+  C  I        Y G            
Sbjct: 1440 HFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVIYYGKDGRKRIEISAS 1499

Query: 597  ---NIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFG 427
                IPALQT+GV+F+ FW +EDDLDVR + SN++HAMLN YGVEAAR TI+ EV+ VF 
Sbjct: 1500 EKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFK 1559

Query: 426  SYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGE 247
            SYGISVNIRHLTLIAD+MT  G YR MNR G    STSP  KM FETA  FIVEAA HG+
Sbjct: 1560 SYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCFETAGNFIVEAAYHGQ 1619

Query: 246  VERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            V+ LE+PSAR+ LGLP+KMGTG  D++  L++
Sbjct: 1620 VDNLETPSARICLGLPVKMGTGCHDLIQKLEI 1651


>ref|XP_011020318.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Populus
            euphratica]
          Length = 1699

 Score = 1681 bits (4353), Expect = 0.0
 Identities = 918/1752 (52%), Positives = 1164/1752 (66%), Gaps = 93/1752 (5%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+VSV+SV FSF+TDEEV + SF KIT+  LLD++ +PV GGLYD A+G   D + CK
Sbjct: 5    EGATVSVDSVAFSFLTDEEVHKHSFVKITSARLLDTLDKPVPGGLYDPAMGPLGD-EPCK 63

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            +CGQ S  C GHCGHIDL+ P+YNPLLF  L  LL++TCF+C HF    N+V+ + SQL+
Sbjct: 64   TCGQRSTNCTGHCGHIDLISPVYNPLLFNFLHKLLQRTCFFCFHFRADSNQVEKFVSQLE 123

Query: 4767 LILKGDIVGAENLGTSFSKDE----ENDEGDTR----FHTDVCRSTTEDLVKHEWTSLQY 4612
            LI+KGD+VGA+ L  SFS  E    E+ +G +      H+       E   + EWTSLQ 
Sbjct: 124  LIIKGDVVGAKRLD-SFSPIEASLPEDSDGSSESCSTIHSGAPHPNNEQSKQSEWTSLQL 182

Query: 4611 SLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSL 4432
            S A S+L+ F+K   ++C  C A    I+ PTFGW     + N+A+R+N+I+        
Sbjct: 183  SEAMSILNNFLKLESKKCKNCSASNPNIRKPTFGWFHWAGLSNAAIRSNLIK-------- 234

Query: 4431 IDEAEKQPVSG-LEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEH--LP 4261
              +  + P  G  EE  D  + T     +  A                 ++N+KEH  L 
Sbjct: 235  -QQTIEGPFGGAFEELIDAEDATKSPNNKESA----------------TNRNLKEHQKLQ 277

Query: 4260 PEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKS-YSMFFI 4084
             +F  QK+      LP+E   +LK LW+NEA LC+ + D+Q++ +   G+ K+ +SMFF+
Sbjct: 278  HQFTSQKDALSSQLLPSEAMDILKLLWKNEAGLCSLMSDIQQQGV---GKKKAGHSMFFL 334

Query: 4083 EALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQ 3904
              +LVPP +FRPP K G  V+ HP SVLLSKV++ N SL +A+ +N +   +  RW++LQ
Sbjct: 335  NTVLVPPIKFRPPTKGGDSVMEHPLSVLLSKVLELNGSLADAHRSN-DFPLIARRWLELQ 393

Query: 3903 LAVNVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 3727
             ++NVLFDS  A  K  K+   GICQ+LEKKEG+FRQKMMGKRVN+ACRSVISPDPYL V
Sbjct: 394  QSINVLFDSNTA--KGQKDVISGICQILEKKEGMFRQKMMGKRVNYACRSVISPDPYLDV 451

Query: 3726 NEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSR 3547
            NEIG+PP FA++LTYPE+VTPWNV KLR+A+ING E HPGATHYVDK +  KLP +   R
Sbjct: 452  NEIGVPPCFAVKLTYPERVTPWNVAKLRNAVINGPESHPGATHYVDKLSTTKLPPNRKMR 511

Query: 3546 ISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRV 3367
            +S++RKL          G+S + EYEGK+VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRV
Sbjct: 512  VSVARKLS---------GRSFDYEYEGKIVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 562

Query: 3366 LAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIR 3187
            L GEKTLRMHY NCSTYNADFDGDEMNVHFPQDE+SRAE +NI NAN QYV P++G+PIR
Sbjct: 563  LKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEVSRAEGYNIVNANNQYVRPSNGEPIR 622

Query: 3186 GLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEIT 3007
             LIQDHIISAVLLTKKDTFLT +E + LLY+S VS     S  G   +K+  +S +DEI 
Sbjct: 623  SLIQDHIISAVLLTKKDTFLTEDEVYQLLYSSGVSNARPTSFSGRAGRKVIFLSYEDEIE 682

Query: 3006 PLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYF------GKNS---- 2857
             L PAI KP  +W+GKQ+IT +LNHITRG PPFTV+K G++  D+F      GK+S    
Sbjct: 683  TLDPAIRKPIYLWSGKQLITAVLNHITRGHPPFTVEKGGKLSYDFFKSKIKNGKSSNGEK 742

Query: 2856 ----------------------RENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSD 2743
                                   ++K++I +N  + GVIDKAQFG+YGLVHTVQEL+G+ 
Sbjct: 743  VGVSKPMKEKESGKVNPKEKQLEDDKMIIFRNVLVQGVIDKAQFGEYGLVHTVQELFGAK 802

Query: 2742 TAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGS 2563
             AG LLSVFSRLFT +LQMHGFTCGVDDLLI K  D ERK+ LE+ +K GE +H KFIG 
Sbjct: 803  AAGTLLSVFSRLFTAYLQMHGFTCGVDDLLITKIKDDERKKQLENCEKCGEQIHRKFIGI 862

Query: 2562 KNDH--VEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSE-VNNKLFPSGLLKTF 2392
            K+++  ++P +LQ   E+ IR+ GESA   LDR M++ LN  TS  V N+L   GLLK  
Sbjct: 863  KDENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNELNSKTSSGVINELLSEGLLKPS 922

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NC+SLMTT+GAKG  VNF QISS LGQQELEGKRVPRMVSGKTLPCFHPWD  ARAGG
Sbjct: 923  GKNCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGG 982

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            +I DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LECL++ YDHTVRD
Sbjct: 983  YIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLRIGYDHTVRD 1042

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            ADGSIVQF YGEDGVDVH+T FI +F+ LA N++I+ EK         L   ++YI++LP
Sbjct: 1043 ADGSIVQFYYGEDGVDVHQTGFIAKFEALAANREIIYEK------SDELGTFNAYISELP 1096

Query: 1851 DALEAKAKDFIGSLSKKK-------RDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLA 1693
            +AL+ KA+ F+ +++K++       +D                     LAQPGE VGVLA
Sbjct: 1097 EALKEKAEIFLRNIAKEQSSLHDYTKDRSSNLVEHDFYKLLKQKFFLSLAQPGEPVGVLA 1156

Query: 1692 AQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRD 1513
            AQSVGEPSTQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TP+MTCPL++GRT++
Sbjct: 1157 AQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIKTPIMTCPLQEGRTKE 1216

Query: 1512 DAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLE 1333
            DAERL+ KLKKV VADIIESMEVSV+P+ VQ+  +  I               ++DI++E
Sbjct: 1217 DAERLSDKLKKVTVADIIESMEVSVMPFAVQNDGICRIYKLKMKLYTPAHYPQHADISVE 1276

Query: 1332 DCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQA 1153
            +   TL+V FVRELED+I  HL+ LSKIS IK    +S   T                  
Sbjct: 1277 NWEETLEVLFVRELEDAIQNHLVLLSKISGIKNFLKESHSGT------PIEAEEDVSGNI 1330

Query: 1152 GKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLG 973
              E             A+DLG+D QKRK+Q  DEMDY+DG +  +   E +  G +   G
Sbjct: 1331 SHEGENDDDSDDEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGLLNEDEGDLSGSQAPSG 1390

Query: 972  FESEIDQAEPDDDYTLGGENENVDDQSQIFD----------------AEDETXXXXXXXX 841
             ES+ + A+ + + +  G    VD+ S+ F+                  + +        
Sbjct: 1391 SESDTEPADKESEISNTG---MVDNDSEYFEKPSHLGNYSKPKSRKKTSESSSQVEMHSK 1447

Query: 840  XXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAA 661
                  +   AK KK +++L+KK  DR+I V+A+GL+FE+H +F  EPHILL +IAQK A
Sbjct: 1448 LKSTEKKKQKAKGKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTA 1507

Query: 660  ENVYVKSSGKINRCSVIDYEGN----------------------IPALQTAGVNFEAFWN 547
            + V +++ GK+ RC V D + N                      IPAL T GV+F  FW 
Sbjct: 1508 KKVCIQNPGKVQRCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWK 1567

Query: 546  MEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTS 367
            M+D LDVR + SN IH ML  YGVEAAR TI+ E+K VF SYGISVN RHL+LIADYMT 
Sbjct: 1568 MQDHLDVRYMYSNSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTH 1627

Query: 366  AGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMG 187
             G YR M+RIG  + S SP+ KMSFETA++FIVEA LH EV+ LE+PSARV LGLP+KMG
Sbjct: 1628 TGEYRPMSRIGGISESISPLSKMSFETASKFIVEATLHREVDNLEAPSARVCLGLPVKMG 1687

Query: 186  TGAFDVLHNLQV 151
            TG+FD++  L++
Sbjct: 1688 TGSFDLMQKLEI 1699


>ref|XP_010546965.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Tarenaya
            hassleriana]
          Length = 1671

 Score = 1672 bits (4330), Expect = 0.0
 Identities = 906/1729 (52%), Positives = 1141/1729 (65%), Gaps = 70/1729 (4%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +GA+  VE+V FSFMTDEEVR+ SF K+T+P+LLD+V RPV GGLYD  LG   D   CK
Sbjct: 8    EGATQVVEAVKFSFMTDEEVRKHSFLKVTSPILLDNVERPVPGGLYDPILGPLDDRTPCK 67

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCG     CPGHCGHI+LV P+Y+PLLF  L SLL+ TCF+C HF +   +V+   SQL+
Sbjct: 68   SCGLLRLSCPGHCGHIELVSPVYHPLLFHFLHSLLQMTCFFCRHFRIRTQEVERVVSQLN 127

Query: 4767 LILKGDIVGAENLGTS-----FSKDEENDEGDTRFHTDVCRSTTEDL-----------VK 4636
            LI+KGD+V A  L +      +S  E   E     H+D+      D+            K
Sbjct: 128  LIIKGDVVEARLLNSDSKFARWSDSESGRESTHSEHSDMSYEFGLDIDSSEKCRDPGTPK 187

Query: 4635 HEWTSLQYSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIR 4456
              WTSLQ+S A +VL+ F+K    +C RC AK  K++ PTFGW  +  +  SA+ AN+I+
Sbjct: 188  QRWTSLQFSEATAVLNAFLKLKTEKCKRCKAKNPKVRKPTFGWFHRAGMTGSAIGANIIQ 247

Query: 4455 GVKLDQSLIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNI 4276
            G+K                              V +P + +      E  GI   +    
Sbjct: 248  GLK------------------------------VRKPSSTVEDLDNDENDGIDAVSEAED 277

Query: 4275 KEHLPPEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYS 4096
               +  EF K K +     LPTEVK +LK LW+NE   C+ I D+Q+       +   ++
Sbjct: 278  SAKVVNEFVKHKNFSTSHLLPTEVKEILKDLWQNEFEFCSFIGDLQQ----CGSKKVDHN 333

Query: 4095 MFFIEALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRW 3916
            MFF+E++LVPP +FR P K G  V+ HPQ+V L+ V++SNISL NAY N  E+SK + RW
Sbjct: 334  MFFLESILVPPIKFRAPTKGGASVMEHPQTVALTTVLESNISLGNAYFNKLEKSKKIRRW 393

Query: 3915 MDLQLAVNVLFDSRKAIRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY 3736
            MDLQ ++NVLFDS+ A  ++ +E  GICQLLEKKEG+FRQKMMGKRVN ACRSVISPDPY
Sbjct: 394  MDLQQSINVLFDSKTATARSQREASGICQLLEKKEGLFRQKMMGKRVNHACRSVISPDPY 453

Query: 3735 LAVNEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSV 3556
            +AVNEIGIPPYFAL+LTYPE+VTPWNV KLR AIING ++HPGATHY D+ + +KLP + 
Sbjct: 454  IAVNEIGIPPYFALKLTYPERVTPWNVEKLREAIINGPDIHPGATHYSDRLSTVKLPPTR 513

Query: 3555 NSRISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHV 3376
             +RI+++RKL SSRG      K+ +  +EGK+VYRH+QDGD VLVNRQPTLHKPS+MAH 
Sbjct: 514  KARIALARKLLSSRGTHMEPEKACDINFEGKIVYRHMQDGDAVLVNRQPTLHKPSIMAHK 573

Query: 3375 VRVLAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGD 3196
            VRVL GEKTLR+HY NCSTYNADFDGDEMNVHFPQDEISRAEA+NI NAN QYV P++GD
Sbjct: 574  VRVLKGEKTLRLHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYVRPSNGD 633

Query: 3195 PIRGLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDD 3016
            P+R LIQDH++SAVLLTK+DTFL ++++  LL++S VS   L S  G   KK+   +SD 
Sbjct: 634  PLRALIQDHVVSAVLLTKRDTFLDKDQFDQLLFSSGVSDMVLSSFSGKPGKKVIVSASDA 693

Query: 3015 EITPLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSRE----- 2851
            E+  + PAI KP P+WTGKQVIT +LNHIT+G+PPFTV+K  ++P D+F   SRE     
Sbjct: 694  ELLAVEPAILKPVPLWTGKQVITAVLNHITKGQPPFTVEKATKLPLDFFKIRSREANSKS 753

Query: 2850 -------------------------NKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGS 2746
                                     +KLLI KN+F+ GVIDKAQF  YGLVH VQELYGS
Sbjct: 754  KENNVRKHSSKKNDNDESWKRELDEDKLLINKNDFVRGVIDKAQFADYGLVHIVQELYGS 813

Query: 2745 DTAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIG 2566
            + AG LLSV SRLFTV+LQMHGFTCGVDDL+I K  D +R + LE S+ +GE V  K IG
Sbjct: 814  NAAGNLLSVLSRLFTVYLQMHGFTCGVDDLIINKDMDDKRMKQLEESELVGERVLRKAIG 873

Query: 2565 SKND-HVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTSE-VNNKLFPSGLLKTF 2392
              ND  ++P  L+   ERII + GE+A +SLDR + + LN+ TS+ V N L   GLLK+ 
Sbjct: 874  IGNDVQIDPKDLKSRVERIICSDGEAALLSLDRSIVNELNQCTSKGVMNDLLSDGLLKST 933

Query: 2391 PSNCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGG 2212
              NC+SLMT +GAKG  VNF QISS LGQQ+LEGKRVPRMVSGKTLPCFHPWD + RAGG
Sbjct: 934  GKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPRMVSGKTLPCFHPWDWSPRAGG 993

Query: 2211 FIADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRD 2032
            FI+DRFLSGL PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCL+K LE LKV YD+TVRD
Sbjct: 994  FISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVNYDYTVRD 1053

Query: 2031 ADGSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLP 1852
            +DGSI+QF YGEDGVDVH+TSFI +FK L  N+ ++L++ S   ED  L++S+ YI DLP
Sbjct: 1054 SDGSIIQFQYGEDGVDVHRTSFIDKFKELTANRDMILQRCS---EDM-LSESNCYITDLP 1109

Query: 1851 DALEAKAKDFIGSLSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
              L+ +A+ F+ +L  K+R I                    LAQPGE VGVLAAQSVGEP
Sbjct: 1110 VTLKKQAEKFVEALPLKER-IASKLVKEELLKLVKPKYFASLAQPGEPVGVLAAQSVGEP 1168

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TP+M+CPL KG+T+DDA  +A 
Sbjct: 1169 STQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASADIKTPIMSCPLLKGKTKDDANDIAD 1228

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KL+K+ VADIIE MEVSVVP+ + ++++ +I                + IT +D   TL 
Sbjct: 1229 KLRKITVADIIEGMEVSVVPFTILEKELCSIHKLKMKLYKPEHYPKNTGITAKDWEETLT 1288

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXX 1132
            V F+R LED+I  H++ LSK+S IK        V                  A K+    
Sbjct: 1289 VVFLRALEDAIQNHIVLLSKMSGIK------NFVEETPSKAGNGEDDGDGSVAQKQVRED 1342

Query: 1131 XXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQ 952
                      +DLG DAQKRK+QA DEMDYE+  D E     +  G +      + E+D 
Sbjct: 1343 EDEDAEGQDIDDLGSDAQKRKKQATDEMDYEESSDEEKNEPSSVSGIE------DPEVD- 1395

Query: 951  AEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKK 772
               D+D  +  E+   DD  +    E +                +   K+KK +     K
Sbjct: 1396 -NEDEDMEISKEDLVGDDGEEPKPEEGK------------KTKAEKTEKKKKKRKAFEVK 1442

Query: 771  KTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVID----- 607
            +TDR + V A+G+ FEVHF+FK+EPHILL QIAQK A+ VY+++ G+I RC+V D     
Sbjct: 1443 ETDRHVFVKAKGMEFEVHFKFKKEPHILLAQIAQKTAQKVYIQNCGEIQRCTVTDCGDAQ 1502

Query: 606  --YEGN---------------IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYG 478
              Y G                 PAL  AG++F  FW ++D++DVR + SN IHAMLNTYG
Sbjct: 1503 VIYYGENPKERKDVSNDEKKAKPALHAAGIDFTTFWELQDEIDVRYLYSNSIHAMLNTYG 1562

Query: 477  VEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKM 298
            VEAAR TI+ E+  VF SYGISV+IRHL LIADYMT +GGYR M+R+G    STSP  +M
Sbjct: 1563 VEAARETIIREINHVFKSYGISVSIRHLNLIADYMTYSGGYRPMSRMGGIAESTSPFCRM 1622

Query: 297  SFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            SFETATRFIV+AA +GEV+ LE+PS+R+ LGLP++ GTG+FDVL  LQ+
Sbjct: 1623 SFETATRFIVQAATYGEVDNLETPSSRICLGLPVQSGTGSFDVLQRLQL 1671


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score = 1671 bits (4327), Expect = 0.0
 Identities = 909/1705 (53%), Positives = 1138/1705 (66%), Gaps = 46/1705 (2%)
 Frame = -2

Query: 5127 QGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCK 4948
            +G + SV++V FSF+T +E+ R S  KITNP+LL+ +L PV GGLYD ALG   D  LCK
Sbjct: 6    EGVTNSVKAVGFSFLTSDELLRSSRVKITNPILLNPLLNPVSGGLYDPALGPLDDKSLCK 65

Query: 4947 SCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLD 4768
            SCGQGS  CPGH GHI+LV P+YNPL+F +L S+L++TCF CHHF  S  +V+   SQ +
Sbjct: 66   SCGQGSKHCPGHFGHIELVSPVYNPLMFNILSSILQRTCFSCHHFHASRKEVEMRTSQFE 125

Query: 4767 LILKGDIVGAENLGTSFSKDEENDEGDTRFHTDVCRSTTEDLVKHEWTSLQYSLARSVLD 4588
            LI+KGDI+ A++L +  S DE N  GD         S   + +   W+SLQ+S A SVL 
Sbjct: 126  LIMKGDIIRAKSLDSIIS-DESNHSGDGD------ESQGVEQLGENWSSLQFSEAMSVLR 178

Query: 4587 TFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKLDQSLIDEAEKQP 4408
             F+   Y++C  CG    +I  PTFGW     + +   RAN +R ++             
Sbjct: 179  KFLLRKYKKCQNCGVVNPRISKPTFGWFHMNVLSDDEARANTMRALES------------ 226

Query: 4407 VSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLPPEFFKQKEYFK 4228
                E   D      G   + +   S  TAK          K  K  L  +   Q +   
Sbjct: 227  ----ETINDDMSLGGGETTEEEDITSTGTAKR--------DKRKKGKLSSKLAAQNK-LS 273

Query: 4227 GPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIEALLVPPCRFRP 4048
            G  LP++VK +L+ LWENEA LC+ I D+Q +     G+   +SMFF+E + VPP +FRP
Sbjct: 274  GSLLPSQVKGILELLWENEARLCSYISDIQDQGF---GKKAGHSMFFLENIFVPPIKFRP 330

Query: 4047 PCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQLAVNVLFDSRKA 3868
            P K G  V+ HPQ+VLL+KV+Q NISL +A++N  + SK++ RWMDLQ +VN+LFD++ +
Sbjct: 331  PTKGGDDVMEHPQTVLLTKVLQGNISLGDAHINKLDPSKVLSRWMDLQQSVNLLFDNKTS 390

Query: 3867 IRKADKETDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 3688
             +   +   GICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL
Sbjct: 391  GQ--GEVAAGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRL 448

Query: 3687 TYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRISISRKLPSSRGV 3508
            +YPE+VTPWNV  LR+AI+NG + HPGATHY D+ A +KLP +      ISRKLPSSRGV
Sbjct: 449  SYPERVTPWNVTMLRNAILNGPQSHPGATHYTDQQATVKLPPNGKLLSFISRKLPSSRGV 508

Query: 3507 VTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVLAGEKTLRMHYVN 3328
            +  HGK  + E+EGK+VYRHL+DGD+VLVNRQPTLHKPS+MAHVVRVL GEKT+RMHY N
Sbjct: 509  ILDHGKISDQEFEGKIVYRHLKDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYAN 568

Query: 3327 CSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRGLIQDHIISAVLL 3148
            CSTYNADFDGDE+NVHFPQDEISRAEA+NI NAN QYV PTSGDPIR LIQDHI+SA LL
Sbjct: 569  CSTYNADFDGDEINVHFPQDEISRAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALL 628

Query: 3147 TKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITPLLPAIWKPKPMW 2968
            TKKDTF+T E +  LLY+S VS+T L S  G   +K+   +S+ E+    PAIWKP+P+W
Sbjct: 629  TKKDTFITYEVFIQLLYSSGVSMTGLGSFSGKHGQKVFMTNSEFEMFLFPPAIWKPEPLW 688

Query: 2967 TGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR------------------ENKL 2842
            TGKQVI+ +L +ITR  PPFTV+K+ +IP ++F    R                  E+KL
Sbjct: 689  TGKQVISALLYYITRDSPPFTVEKNAKIPSNFFKTQVRDGKRHTRDKSRNKVEPDDEDKL 748

Query: 2841 LIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHGFTCGVD 2662
            LI KN+ + GV+DKAQFG YG++HTVQELYGS  AG LLS  SRLFT FLQMHGFTCGVD
Sbjct: 749  LIYKNDLVRGVVDKAQFGDYGIIHTVQELYGSKVAGNLLSALSRLFTTFLQMHGFTCGVD 808

Query: 2661 DLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKN-DHVEPGKLQRETERIIRTKGESAA 2485
            DL+I +  D+ER   L S ++IG+ VH +FIG  N D ++P  LQ   E+ IR+ GE+A 
Sbjct: 809  DLMITEEKDVERMDQLRSCEEIGDIVHREFIGVMNSDIIDPITLQLNIEKKIRSNGEAAL 868

Query: 2484 MSLDRMMSSALN-RLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFTQISSLLG 2308
              LDR M+S LN R +S +   L   G+LK    NC+SLMTT+GAKG +VNF QISS LG
Sbjct: 869  TYLDRKMTSNLNSRTSSGILKDLLSDGILKPSGKNCISLMTTSGAKGSMVNFQQISSHLG 928

Query: 2307 QQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMAGRDGLVD 2128
            QQELEGKRVPRMVSGKTLPCF PWD + RAGGFI DRFL+GL PQEYYFHCMAGR+GLVD
Sbjct: 929  QQELEGKRVPRMVSGKTLPCFAPWDCSPRAGGFIIDRFLTGLHPQEYYFHCMAGREGLVD 988

Query: 2127 TAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTSFITQFKM 1948
            TA+KTSRSGYLQRCL+K LECLKVCYDHTVRDADGSI+QF YGEDGVDVH TSFI +F+ 
Sbjct: 989  TAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGSIIQFHYGEDGVDVHHTSFINKFEA 1048

Query: 1947 LATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFIGSLSKKKRDILHXXXXX 1768
            L+TN+++V            L +S  YIN LPDAL+ KA++F     K++   L      
Sbjct: 1049 LSTNKELVYGNCC-----RQLDRSSPYINKLPDALKEKAENFFRDSLKQRN--LGSLKRA 1101

Query: 1767 XXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTFHFAGRGEMNVTLGIPRLQE 1588
                         LAQPGE+VGVLA+QSVGEP+TQMTLNTFH AGRGEMNVTLGIPRLQE
Sbjct: 1102 EFLKLMEHKYVSCLAQPGESVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQE 1161

Query: 1587 ILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVADIIESMEVSVVPYFVQDQQV 1408
            I+  A+  I TP MTCPLR  ++ ++A  LA KLKK+ VADII+SM+VSVVP  V   QV
Sbjct: 1162 IVMAAARDIKTPFMTCPLRSNKSMEEAICLADKLKKITVADIIKSMKVSVVPVSVLGGQV 1221

Query: 1407 STIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELEDSIHRHLLTLSKISTIKIIA 1228
             +I               YSDITLED   TL++ FVRELED+I  H+  LSKIS IK   
Sbjct: 1222 CSIYKLVMKLYKPKQYPKYSDITLEDWEDTLRISFVRELEDAIENHMALLSKISGIKKFK 1281

Query: 1227 DKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEM 1048
               +  +               K    +              EDLG DAQKRKRQ  DE+
Sbjct: 1282 TDPQSHSNSSEDAHGNGSESETKGKSNDDDDDDDVVEDTEGYEDLGSDAQKRKRQGTDEV 1341

Query: 1047 DYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTL-GGENENVDDQSQ---IFD 880
            DYEDG +      E  H G    L  E E D+   DD+ TL   ++E +D+ S+   IF+
Sbjct: 1342 DYEDGPE------EETHDG---VLSEEIENDEDNVDDNMTLDASDSEGLDELSESKSIFE 1392

Query: 879  AEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDRAILVDARGLNFEVHFRFKQE 700
                               +D+L ++KK K+R   +K DRA+ V A+G++F++HF+F  E
Sbjct: 1393 -------------------KDSLKREKK-KSRPTTRKYDRAVFVKAKGMHFQIHFKFTGE 1432

Query: 699  PHILLTQIAQKAAENVYVKSSGKINRCSVID-------YEG---------------NIPA 586
            P ILL +IA ++A+ V +++SG++  C  +        Y G                IPA
Sbjct: 1433 PDILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDIPASVKEKIPA 1492

Query: 585  LQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAARATILNEVKAVFGSYGISVN 406
            LQT+GV+F+ FW ++DDLDVR + SN++HAMLN YGVEAAR TI+ EV+ VF SYGISVN
Sbjct: 1493 LQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVN 1552

Query: 405  IRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETATRFIVEAALHGEVERLESP 226
            IRHLTLIAD+MT +GGYR MNR G     TSP  KM FETA++FIVEAA HG+V+ LE+P
Sbjct: 1553 IRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAYHGQVDNLETP 1612

Query: 225  SARVALGLPIKMGTGAFDVLHNLQV 151
            S+R+ LGLP+KMGTG  D++  L++
Sbjct: 1613 SSRICLGLPVKMGTGCHDLIQKLEI 1637


>ref|XP_011075204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Sesamum
            indicum]
          Length = 1701

 Score = 1664 bits (4308), Expect = 0.0
 Identities = 900/1733 (51%), Positives = 1133/1733 (65%), Gaps = 80/1733 (4%)
 Frame = -2

Query: 5109 VESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLCKSCGQGS 4930
            VE+V F FMTDEEVRR S  KITNP LLD + +P+ GGLYD A+G   +   CKSCGQ +
Sbjct: 7    VEAVRFGFMTDEEVRRHSVVKITNPNLLDILEKPIPGGLYDPAMGPLDENSPCKSCGQRA 66

Query: 4929 WQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQLDLILKGD 4750
            + CPGHCGHI+LV P YNPLLF  L +LL KTCFYC  F  S  +V++  SQL+LI+KGD
Sbjct: 67   YHCPGHCGHIELVSPAYNPLLFNTLNNLLNKTCFYCFQFRTSRREVENCVSQLELIVKGD 126

Query: 4749 IVGAE------------NLGTSFSKDEENDEGDTRFHTDVCRSTTEDLVKHE------WT 4624
            IVGA+            N+    S D  + E     HT      + D   +E      W 
Sbjct: 127  IVGAKRLSMRQNLQDKKNMDWVLSDDIVDPEDSQGSHTSHSSGISGDQNHYEQNSQACWD 186

Query: 4623 SLQYSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVIRGVKL 4444
            S Q + A SVL+ F+K+  R+C  C     K+  PTFGW     + ++ +R+N IR  +L
Sbjct: 187  SSQLTEAMSVLNEFLKKKGRKCKNCECNNPKLNKPTFGWFHVSGLSDTQLRSNAIRRSRL 246

Query: 4443 DQSLIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHL 4264
            D +     E++P S   E  + S+Y+     +     S   A + P  S +  K + +  
Sbjct: 247  DVAHSGGGEERPSS---EVVNASDYSWKDDSETAEANSFIAASDTPKKSSK--KGVNQAR 301

Query: 4263 PPEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFI 4084
                 +   YF GP LP+EV+ +L+RLWENEA LC+ + D+Q++   +SG    YSMFF+
Sbjct: 302  NQGLEETNNYFSGPLLPSEVRDILRRLWENEAPLCSYMCDIQQQQCKLSGNVAGYSMFFL 361

Query: 4083 EALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQ 3904
            E++LVPP +FRPP K G  V+ HPQ+VLL KV+QSNI+L NA+VNN+ERSK++ RWMDLQ
Sbjct: 362  ESILVPPIKFRPPAKGGDSVMEHPQTVLLGKVLQSNIALGNAHVNNAERSKIINRWMDLQ 421

Query: 3903 LAVNVLFDSRKAIRKADKE-TDGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 3727
            L++NVLFDS+ A  +A K+ T GICQ LEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV
Sbjct: 422  LSINVLFDSKTANSQAQKDGTSGICQFLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAV 481

Query: 3726 NEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSR 3547
            NEIGIPPYFALRLTYPE+VTPWN  KLR A+ING E+HPGAT YVD  + +KLP+S   R
Sbjct: 482  NEIGIPPYFALRLTYPERVTPWNAGKLRGAVINGPEIHPGATTYVDSVSTVKLPSSKKMR 541

Query: 3546 ISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRV 3367
            ++ISRKLPSSRG+V+  GK  E E+EGK VYRHLQDGDIVLVNRQPTLHKPS+MAHVVRV
Sbjct: 542  VAISRKLPSSRGLVSQSGKINELEFEGKFVYRHLQDGDIVLVNRQPTLHKPSIMAHVVRV 601

Query: 3366 LAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIR 3187
            L GEKTLRMHY NCS+YNADFDGDE+NVHFPQDEISRAEA+NI NAN+QY+VPT GD +R
Sbjct: 602  LKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVR 661

Query: 3186 GLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEIT 3007
            GLIQDHI+ AVLLT K+TFLTR E+  LLY S V      S  G  ++K+  + S+  + 
Sbjct: 662  GLIQDHIVGAVLLTLKNTFLTRSEFSQLLYGSGVFAGGPGSLAGKQSRKVSLVDSEGLVE 721

Query: 3006 PLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSREN------- 2848
             +LP+IWKP+P+WTGKQVIT +LNHITRG  P TVK  G++P++YF  +S +N       
Sbjct: 722  SVLPSIWKPEPLWTGKQVITALLNHITRGCAPCTVKNQGKVPKNYFTGSSYKNGEEDEDQ 781

Query: 2847 ----KLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQMHG 2680
                 LLI KNE + GVIDKAQFGK+GLVHT+QELYGS++AGILLS  SRLFT+FLQ+HG
Sbjct: 782  NAEHNLLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNSAGILLSALSRLFTIFLQIHG 841

Query: 2679 FTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERIIRTK 2500
            FTCGVDDL+I  HYD++RK  LE  D +GE VH  F+  K   +   +LQ E E++I   
Sbjct: 842  FTCGVDDLIILPHYDVQRKEKLEGED-VGEEVHCDFVKFKPGQIGHEELQLEIEKVICRD 900

Query: 2499 GESAAMSLDRMMSSAL-NRLT---SEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNF 2332
             ESA  +LD  M + L NRLT   S++   L  +GLLK FP NC+S+MTTTGAKG  VNF
Sbjct: 901  RESATGALDMKMKNKLTNRLTREGSQILKHLLTAGLLKPFPKNCISVMTTTGAKGSTVNF 960

Query: 2331 TQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCM 2152
             QIS+ LGQQELEGKRVPRMVSGKTLPCF PWD TARAGGFI DRFL+GL PQEYYFHCM
Sbjct: 961  QQISAYLGQQELEGKRVPRMVSGKTLPCFPPWDFTARAGGFITDRFLTGLRPQEYYFHCM 1020

Query: 2151 AGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKT 1972
            AGR+GLVDTA+KTSRSGYLQRCL+K LE LKVCYD+TVRDADGSI+QF YGEDGVDVH+T
Sbjct: 1021 AGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHQT 1080

Query: 1971 SFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDFI---GSLS-- 1807
            SF+  FK L  NQ+ +L+K           + DSYI  LP+ LE +A+ FI   G LS  
Sbjct: 1081 SFLKNFKALEDNQETILQKYRNR------RQFDSYIQKLPEGLEEEARRFIQEAGDLSSE 1134

Query: 1806 -------------KKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPST 1666
                         +K R  +                   LAQ GE VGV+AAQS+GEPST
Sbjct: 1135 NQKASGIKHLNKSRKARKKVTGKVQDKFIELVKQKYLSSLAQSGEPVGVIAAQSIGEPST 1194

Query: 1665 QMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKL 1486
            QMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TP++TCP  + R++ D   L + +
Sbjct: 1195 QMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDVIKTPILTCPFLQWRSKHDVVSLVSNV 1254

Query: 1485 KKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVP 1306
            KKV VAD+IESMEV +  +  +  ++                     ++L D   TLK  
Sbjct: 1255 KKVTVADLIESMEVQLSIHQARIYKLKM------------KLKDTEFVSLRDIQETLKTV 1302

Query: 1305 FVRELEDSIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXX 1126
            F+RELED+I  H++ LS++S IK     S                       +E      
Sbjct: 1303 FLRELEDAIENHVIFLSRVSGIKNFMSSSR------SEESNEAYEDDSGPRAQEEIDDDD 1356

Query: 1125 XXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAE 946
                    +DLG D QKRK+QA+DEMDYED  ++++   E+E  GK  S G   E     
Sbjct: 1357 ADDDYDKGDDLGSDVQKRKQQASDEMDYED--ESDVDPGEDEGLGKGKSDGDHLE----- 1409

Query: 945  PDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKT 766
             D D     E ++ DD+    + ++                  +    K  +  L  KK 
Sbjct: 1410 -DIDTRKDEETDDFDDKDDASNVQNVDEVMAEAKSSGKKDRAISKGIDKSIEELLSDKKI 1468

Query: 765  DRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYEGNIP- 589
             RAI ++ +GL+FEVHF F  EPH+LL QIAQK A+ V++K +GKI++C V+ Y+ +   
Sbjct: 1469 RRAIYMEVKGLSFEVHFTFTSEPHVLLAQIAQKTAKKVFIKRTGKISQCKVVQYDPDEKT 1528

Query: 588  ---------------------------ALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAML 490
                                       A++ +G +F++ W M+DDLD+ ++ SN+IHAML
Sbjct: 1529 VIWDNKKKPKKGDAEKQQADGEDSAYWAVKASGEDFKSIWEMQDDLDLSRLYSNNIHAML 1588

Query: 489  NTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSP 310
             TYGVEAARAT++ EV  VF  YG+ ++ RHL+LIADYMT  GGYR M+R G  + S SP
Sbjct: 1589 KTYGVEAARATLIREVTQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMSRHGSISESLSP 1648

Query: 309  IGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
              KMSFETA++FIVEAA H   + LE+PS+R+ LGLP+KMGTG FD++  L +
Sbjct: 1649 FLKMSFETASKFIVEAASHALTDNLETPSSRICLGLPVKMGTGCFDLMQKLDI 1701


>gb|KCW48062.1| hypothetical protein EUGRSUZ_K01811 [Eucalyptus grandis]
          Length = 1606

 Score = 1652 bits (4278), Expect = 0.0
 Identities = 901/1675 (53%), Positives = 1118/1675 (66%), Gaps = 65/1675 (3%)
 Frame = -2

Query: 4980 LGSFQDGQLCKSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSE 4801
            +G+  D   CKSCGQ S+ CPGHCGHIDLV P+YNPLLF  L +LLK+TCF+C HF  S 
Sbjct: 1    MGTLNDTTACKSCGQRSFNCPGHCGHIDLVSPVYNPLLFNTLYNLLKRTCFFCFHFRESR 60

Query: 4800 NKVQHYASQLDLILKGDIVGAENL----GTSFSKDEENDEGDTRFHT---DVCRSTTEDL 4642
            ++V    S+L+LI KGD+ GA+ L     T+ S  E ++ GD    T   D+   +    
Sbjct: 61   SQVDACVSKLELIAKGDVAGAKELDSKWATNSSLREASNGGDVSCSTVRSDLQHDSPVHQ 120

Query: 4641 VKHEWTSLQYSLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANV 4462
             + EWTSLQ++ A SVL+ F+K  Y++C  C AK  KI  PTFGW     +  +  R N+
Sbjct: 121  KQGEWTSLQFNEAMSVLNKFLKPTYKECKNCKAKNPKISKPTFGWFHMSGMTGAQTRGNI 180

Query: 4461 IRGVKLDQSLID-EAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAH 4285
            IRG K+D   +D + E + + G   Q DG         + + + S   + +  GI+ +  
Sbjct: 181  IRGNKMDGPFLDGDGEMESLEGAFLQDDGGN-------EAETQSSTFASPDGIGIAKKGQ 233

Query: 4284 KNIKEH-LPPEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGEN 4108
            K  K H L  E+ KQK +F GP LP+E          NEA LC+ I D+Q++    SG +
Sbjct: 234  KKRKGHSLSDEYIKQKNFFSGPLLPSE----------NEAPLCSFISDIQQQG---SGNS 280

Query: 4107 KSYSMFFIEALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKL 3928
             ++SMFF+  +LVPP +FRPP K G  V+ HP +VLL+KV+Q+NISL NA+ +N  R+ +
Sbjct: 281  ATHSMFFLGTVLVPPIKFRPPSKGGDSVMEHPHTVLLAKVLQANISLGNAHQSN--RATI 338

Query: 3927 VPRWMDLQLAVNVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVI 3751
            + RWMDLQ ++N+LFDS+ A  +  ++   GICQLLEKKEG+FRQ MMGKRVN+ACRSVI
Sbjct: 339  ISRWMDLQQSINLLFDSKTATGQGRRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVI 398

Query: 3750 SPDPYLAVNEIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMK 3571
            SPDPYLAVNEIGIPPYFALRLTYPE+VTPWN   LR AIING + HPGATHY+DK + +K
Sbjct: 399  SPDPYLAVNEIGIPPYFALRLTYPERVTPWNTVSLRKAIINGADTHPGATHYIDKLSTLK 458

Query: 3570 LPTSVNSRISISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPS 3391
            LP +   RISISR+LPSSRGVVT  G+S ++E EGK+VYRHL+DGDIVLVNRQPTLHKPS
Sbjct: 459  LPPARKGRISISRRLPSSRGVVTQAGRSSDNEVEGKIVYRHLRDGDIVLVNRQPTLHKPS 518

Query: 3390 MMAHVVRVLAGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVV 3211
            +MAHVVRVL GEKTLRMHY NCSTYNADFDGDEMNVHFPQD+ISRAEA+NI NAN QYV 
Sbjct: 519  IMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVK 578

Query: 3210 PTSGDPIRGLIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTK--KI 3037
            PT+G PIR LIQDHI+SA +LTKKDTFL  +E++HLLY+S VS     +  G+F K  K 
Sbjct: 579  PTNGSPIRALIQDHIVSAAILTKKDTFLNYDEFNHLLYSSGVSA----AGSGSFRKLGKK 634

Query: 3036 CTISSDDEITPLLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNS 2857
              I+ +D +   +PAIWKP+P+WTGKQ+I  +L+H+TRG PPFTV+K G+IP D+F +  
Sbjct: 635  VAINFEDNLLSPVPAIWKPEPLWTGKQLIGAVLDHLTRGYPPFTVEKQGKIPSDFFKRKL 694

Query: 2856 R----------------------ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSD 2743
            +                      E+ +LI KN  I GVIDKAQFG YGLVHT QELYGS+
Sbjct: 695  KHKPSKRKGTNKDKERERNEEPGEDTVLIFKNYLICGVIDKAQFGDYGLVHTFQELYGSN 754

Query: 2742 TAGILLSVFSRLFTVFLQMHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGS 2563
             AGILLS FSRLFT FLQ+HGFTCGVDDLL++K  D +R++ LE  +  GE VH + +G 
Sbjct: 755  AAGILLSAFSRLFTAFLQLHGFTCGVDDLLLSKDIDEKRQQQLEECENCGEEVHCEVVG- 813

Query: 2562 KNDHVEPGKLQRETERIIRTKGESAAMSLDRMMSSALNRLTS-EVNNKLFPSGLLKTFPS 2386
             ND ++P +LQ + E +IR+ G+SA  +LDR M S LN L+S ++   L   GL K    
Sbjct: 814  VNDFIDPAELQLKIEEVIRSNGDSALTNLDRRMISRLNELSSKKIEKNLLSEGLFKPTGK 873

Query: 2385 NCLSLMTTTGAKGGLVNFTQISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFI 2206
            NC+SLMTT+GAKGG  NF QISS LGQQELEG+RVPRMVSGKTLPCF PWD  +RAGGFI
Sbjct: 874  NCISLMTTSGAKGGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCFPPWDWASRAGGFI 933

Query: 2205 ADRFLSGLLPQEYYFHCMAGRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDAD 2026
             DRFL+GL PQEYYFHCMAGR+GLVDTA+KTSRSGYLQRCLVK LECLKV YDHTVRDAD
Sbjct: 934  IDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLECLKVSYDHTVRDAD 993

Query: 2025 GSIVQFCYGEDGVDVHKTSFITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDA 1846
            GSIVQF YGEDG+DVHKTSF+ +F  L  N  I+  K S       L KS+SYI DLP+A
Sbjct: 994  GSIVQFYYGEDGIDVHKTSFVAKFDALLANHDIMKAKYS-----TELRKSNSYITDLPEA 1048

Query: 1845 LEAKAKDFI--GSLSKKKRDILHXXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEP 1672
            L+ KA  FI   +LS  +                       LAQPGE VG++AAQSVGEP
Sbjct: 1049 LKDKANKFICDRNLSVPRLARNEILKPEDFVKSVEQKYFSSLAQPGEPVGIVAAQSVGEP 1108

Query: 1671 STQMTLNTFHFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAA 1492
            STQMTLNTFH AGRGEMNVTLGIPRLQEIL  AS  I TP+MTCPL +GR++ DA  LA 
Sbjct: 1109 STQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASTDIKTPIMTCPLWRGRSKQDANSLAE 1168

Query: 1491 KLKKVCVADIIESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLK 1312
            KLKK+ VA++IESMEV+VVP+ V + QV +I                   +++ C   L+
Sbjct: 1169 KLKKITVAEMIESMEVAVVPFAVNNHQVCSIYKLKMKLKRPKV------FSVKHCEEILE 1222

Query: 1311 VPFVRELEDSIHRHLLTLSKISTIKIIA------DKSEHVTRXXXXXXXXXXXXXXKQAG 1150
            V ++RELED+I  HLL LSKIS IK         D S   ++                 G
Sbjct: 1223 VVYLRELEDAIQNHLLLLSKISGIKNFTSSETDEDASGSASQHAEERTVDDDADDGDDDG 1282

Query: 1149 KEXXXXXXXXXXDVLAEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGF 970
             +              +DLG D QKRKRQA DEM+YEDG        E E    E S G 
Sbjct: 1283 NDN-------------DDLGFDGQKRKRQATDEMEYEDGY-------EEERNEPELSAGL 1322

Query: 969  ESEIDQAEPDDDYTLGGENENVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPK 790
            ES+ DQA   +D  +G + +     +    +  +T             S+D   K+ + K
Sbjct: 1323 ESDGDQA---NDVDIGEDGDGPPGIAPEIVSPSKT-----KKSKKNAKSDDEGKKRVRTK 1374

Query: 789  ARLIKKKTDRAILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVI 610
               + K+ DRAI V A GL+FEVHFRF  EPH+LL QIAQK A+ VY++SSGKI  C VI
Sbjct: 1375 ---VIKEFDRAIFVAANGLDFEVHFRFTNEPHVLLGQIAQKVAKKVYLRSSGKIESCQVI 1431

Query: 609  DYEGN----------------------IPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHA 496
              + N                      IPA+ T G +F A W M+D LD+R + SNDIHA
Sbjct: 1432 TCKENQVIYYGEDPKRRQKIEAKDKEAIPAINTNGADFCALWQMQDQLDIRYIYSNDIHA 1491

Query: 495  MLNTYGVEAARATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTST 316
            ML TYGVEAAR TI+ EV+ VFGSYGISV++RHLTLIAD+MT AGGYR MNR+G    S 
Sbjct: 1492 MLTTYGVEAARETIIREVQNVFGSYGISVDMRHLTLIADFMTHAGGYRPMNRLGGIAESI 1551

Query: 315  SPIGKMSFETATRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            SP  KMSFETA++FIV+AA HG V+ LE+PSAR+ LGLP+KMGTG+FD+L  +++
Sbjct: 1552 SPFSKMSFETASKFIVDAAYHGVVDNLETPSARICLGLPMKMGTGSFDLLQKIEL 1606


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score = 1646 bits (4262), Expect = 0.0
 Identities = 888/1724 (51%), Positives = 1112/1724 (64%), Gaps = 64/1724 (3%)
 Frame = -2

Query: 5130 DQGASVSVESVYFSFMTDEEVRRISFKKITNPLLLDSVLRPVEGGLYDMALGSFQDGQLC 4951
            +QGAS +VE+V+FSFMTDEEVRR S  K+T+P LLD +  PV  GLYD A+G       C
Sbjct: 2    NQGASEAVEAVHFSFMTDEEVRRHSVVKVTSPNLLDGLQLPVPNGLYDPAMGPLDHYSQC 61

Query: 4950 KSCGQGSWQCPGHCGHIDLVLPIYNPLLFPVLRSLLKKTCFYCHHFMLSENKVQHYASQL 4771
            K C Q +  C GHCGHI+LV P+YNPLLF +L +LL++TCFYC HF  S  +V+   S+L
Sbjct: 62   KFCCQSN--CSGHCGHIELVSPVYNPLLFNMLHNLLQRTCFYCFHFRASRAEVEKCVSEL 119

Query: 4770 DLILKGDIVGAENLGTSFSKDEENDEGDTRFHTDVCRSTTEDLVKHE-------WTSLQY 4612
            +LI KGD+VGA+ +  + S D   D  ++      C     ++  H        W + Q+
Sbjct: 120  ELIAKGDVVGAKMID-ALSPDNSTDREESEGSHMSCAMDDLNMQDHREYNKRPSWDNFQF 178

Query: 4611 SLARSVLDTFMKENYRQCGRCGAKAAKIKSPTFGWLRKEPIENSAVRANVI---RGVKLD 4441
            + A +V+D  +K    +C  C AK  KI+ P+FG    + I N  +R N I   R   L 
Sbjct: 179  TEAMAVIDRILKTKTEKCSNCKAKNPKIRKPSFGRFHMD-ISNKQIRENYINSGRRFNLH 237

Query: 4440 QSLIDEAEKQPVSGLEEQKDGSEYTSGSVEQPDAELSGATAKEMPGISMEAHKNIKEHLP 4261
             +   E    P      +  G   TS  V   D   +    K   G   +  +       
Sbjct: 238  DTGGSEENPSPEVVNATEPLGEAETSLCVTSTDGVENSKARKRQGGDQSDVVE------- 290

Query: 4260 PEFFKQKEYFKGPFLPTEVKLLLKRLWENEAHLCNRIFDVQRKNLSISGENKSYSMFFIE 4081
                +QK+ F    LP++V+ +++ LWENEA LC    D+Q ++ + SG+    SMFF++
Sbjct: 291  ----QQKDSFSVAHLPSQVRSIIEHLWENEAPLCTFFCDIQSQHHNTSGKVAGPSMFFLD 346

Query: 4080 ALLVPPCRFRPPCKNGGQVLSHPQSVLLSKVVQSNISLRNAYVNNSERSKLVPRWMDLQL 3901
            ++LVPP +FRPP K G  ++ HP +VLL KVVQ+NI+L NA++N + RSK++ R MDLQ 
Sbjct: 347  SILVPPIKFRPPAKGGDSIMEHPHTVLLGKVVQANIALGNAHINRAGRSKIISRLMDLQQ 406

Query: 3900 AVNVLFDSRKAIRKADKET-DGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPYLAVN 3724
            +VNVLFDS+ A     K+   GICQ+LEKKEGIFRQKMMGKRVNFACRSVISPDPYL+VN
Sbjct: 407  SVNVLFDSKTASGPGQKDVGSGICQMLEKKEGIFRQKMMGKRVNFACRSVISPDPYLSVN 466

Query: 3723 EIGIPPYFALRLTYPEKVTPWNVNKLRHAIINGTEVHPGATHYVDKSAVMKLPTSVNSRI 3544
            EIGIPPYFALRLTYPE++TPWN  K+R A+ING E HPGA  + D+ A +KLP++   R+
Sbjct: 467  EIGIPPYFALRLTYPERLTPWNAVKMRDAVINGPENHPGAVSFADRIATVKLPSNKKMRV 526

Query: 3543 SISRKLPSSRGVVTHHGKSLESEYEGKVVYRHLQDGDIVLVNRQPTLHKPSMMAHVVRVL 3364
            +ISRKLPSSRG VT  G++ E E+EGKVVYRHLQDGD+VLVNRQPTLHKPS+MAHVVRVL
Sbjct: 527  AISRKLPSSRGAVTQSGRNNEYEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVL 586

Query: 3363 AGEKTLRMHYVNCSTYNADFDGDEMNVHFPQDEISRAEAFNIANANKQYVVPTSGDPIRG 3184
             GEKTLRMHY NCSTYNADFDGDEMNVHFPQDEISRAEA+NI NAN+QY+VPT GD +RG
Sbjct: 587  KGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIVPTKGDTVRG 646

Query: 3183 LIQDHIISAVLLTKKDTFLTREEYHHLLYASHVSVTALRSSIGNFTKKICTISSDDEITP 3004
            LIQDHI+ AV+LT K+TFLT  E++ LLY S V       + GN + K+  +  +  +  
Sbjct: 647  LIQDHIVGAVILTMKNTFLTLHEFNQLLYGSGVFAAGPAPTSGNHSNKVSVVDFEGVVQT 706

Query: 3003 LLPAIWKPKPMWTGKQVITTILNHITRGRPPFTVKKDGRIPQDYFGKNSR---------- 2854
            +LPA+WKPKP+WTGKQVIT +LNH+T+G  P TVK  G+IP  YF   SR          
Sbjct: 707  VLPAVWKPKPLWTGKQVITALLNHLTKGCAPCTVKNKGKIPYPYFLSESRLVEYQSREEQ 766

Query: 2853 -----ENKLLIQKNEFIHGVIDKAQFGKYGLVHTVQELYGSDTAGILLSVFSRLFTVFLQ 2689
                 EN+ LI KNE + GVIDKAQFGK+GLVHT+QELYGS+ AGILLS  SRLFT+FLQ
Sbjct: 767  EDRTAENEFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGSNKAGILLSALSRLFTIFLQ 826

Query: 2688 MHGFTCGVDDLLIAKHYDMERKRMLESSDKIGEHVHAKFIGSKNDHVEPGKLQRETERII 2509
            +HGFTCGVDDL+I  HYD+ RK  LE  D +GE  H  F+  K   + P +LQ E E+ +
Sbjct: 827  LHGFTCGVDDLVILPHYDIRRKEELEGDD-VGEEAHCDFVKFKRGEIGPLELQLEIEKAM 885

Query: 2508 RTKGESAAMSLDRMMSSALNRLTSEVNNKLFPSGLLKTFPSNCLSLMTTTGAKGGLVNFT 2329
             +  E+A  +LD  M + L    S+ N +L   GLLK FP NC++LMT TGAKG  VNF 
Sbjct: 886  SSNKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGAKGSTVNFQ 945

Query: 2328 QISSLLGQQELEGKRVPRMVSGKTLPCFHPWDSTARAGGFIADRFLSGLLPQEYYFHCMA 2149
            QISS LGQQELEGKRVPRMVSGKTLPCF PWD  +RAGG+++DRFLSGL PQEYYFHCMA
Sbjct: 946  QISSYLGQQELEGKRVPRMVSGKTLPCFPPWDCASRAGGYVSDRFLSGLRPQEYYFHCMA 1005

Query: 2148 GRDGLVDTAIKTSRSGYLQRCLVKTLECLKVCYDHTVRDADGSIVQFCYGEDGVDVHKTS 1969
            GR+GLVDTA+KTSRSGYLQRCL+K LE LKVCYD+TVRDADGSI+QF YGEDGVDVH+TS
Sbjct: 1006 GREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGEDGVDVHRTS 1065

Query: 1968 FITQFKMLATNQKIVLEKLSGHVEDAHLAKSDSYINDLPDALEAKAKDF----------- 1822
            F+  FK L  NQ+ + +KL       H  K +SYI  LPD LE K K F           
Sbjct: 1066 FLKNFKALKNNQETICQKL------RHGRKLNSYIEKLPDGLEEKVKHFWEKRTKKLEKK 1119

Query: 1821 IGSLSKKKRDILH-XXXXXXXXXXXXXXXXXXLAQPGEAVGVLAAQSVGEPSTQMTLNTF 1645
            +G L KK+  +                     LA  GE VGVLA QSVGEPSTQMTLNTF
Sbjct: 1120 LGKLVKKEEMVKQLKEEEADFLELVRQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLNTF 1179

Query: 1644 HFAGRGEMNVTLGIPRLQEILQRASYKILTPVMTCPLRKGRTRDDAERLAAKLKKVCVAD 1465
            H AGRGEMNVTLGIPRLQEIL  AS  I TP++TCP    ++++DA+ L AK+KK+ VAD
Sbjct: 1180 HLAGRGEMNVTLGIPRLQEILMTASEAIKTPILTCPFLGWQSKNDAQSLLAKVKKITVAD 1239

Query: 1464 IIESMEVSVVPYFVQDQQVSTIXXXXXXXXXXXXXXXYSDITLEDCVGTLKVPFVRELED 1285
            +IESMEV ++P  + + QVS +                  ++ EDC  TLK  F+RELED
Sbjct: 1240 MIESMEVKLLPLSIYNHQVSQLYKLTVKLKKHDF------VSSEDCEYTLKFVFLRELED 1293

Query: 1284 SIHRHLLTLSKISTIKIIADKSEHVTRXXXXXXXXXXXXXXKQAGKEXXXXXXXXXXDVL 1105
            +I  HL  LSKI+ I+     SE V                +    E             
Sbjct: 1294 AIESHLALLSKINGIQNFKTSSESVDSDETEENASSTRHEEEMLDDEDEDER-------- 1345

Query: 1104 AEDLGVDAQKRKRQAADEMDYEDGLDNEMFVTENEHGGKEHSLGFESEIDQAEPDDDYTL 925
             EDL  DAQKRK+Q  DEMDY+D         ENE    E     E E +++E  D+   
Sbjct: 1346 TEDLSSDAQKRKQQTTDEMDYDD--------DENE---DEAETTAEIEDEKSEQTDEIDN 1394

Query: 924  GGENE-----NVDDQSQIFDAEDETXXXXXXXXXXXXXSEDNLAKQKKPKARLIKKKTDR 760
            G E E     N +  S++   ED+                    KQ K K R  KK +DR
Sbjct: 1395 GDEEEIGNRGNEEQMSKLQSTEDD---ISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDR 1451

Query: 759  AILVDARGLNFEVHFRFKQEPHILLTQIAQKAAENVYVKSSGKINRCSVIDYE------- 601
             + VD  GL+FEVHFRF  EPHILL Q+AQK A+ VY+K+SGKI++C ++ YE       
Sbjct: 1452 CVFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVM 1511

Query: 600  --------------GNIPALQTAGVNFEAFWNMEDDLDVRKVVSNDIHAMLNTYGVEAAR 463
                              AL+ AGV+F  FW M+DDLDV ++ +N+I AMLNTYGVEAAR
Sbjct: 1512 WDEYQTKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAAR 1571

Query: 462  ATILNEVKAVFGSYGISVNIRHLTLIADYMTSAGGYRAMNRIGMANTSTSPIGKMSFETA 283
            A+IL EVK VFG YG+ ++ RHL+LIAD+MT  GGY+ M+R G  + S SP  KMSFETA
Sbjct: 1572 ASILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETA 1631

Query: 282  TRFIVEAALHGEVERLESPSARVALGLPIKMGTGAFDVLHNLQV 151
            ++FIVEAA HG  + LE+PS+R+ LGLP+KMGTG FD++  L +
Sbjct: 1632 SKFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKLDI 1675