BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00006744
         (3130 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256577.1| PREDICTED: RNA polymerase II C-terminal doma...   919   0.0  
ref|XP_010256580.1| PREDICTED: RNA polymerase II C-terminal doma...   914   0.0  
ref|XP_010256578.1| PREDICTED: RNA polymerase II C-terminal doma...   914   0.0  
ref|XP_010256576.1| PREDICTED: RNA polymerase II C-terminal doma...   914   0.0  
ref|XP_007026742.1| RNA polymerase II C-terminal domain phosphat...   894   0.0  
ref|XP_007026745.1| RNA polymerase II C-terminal domain phosphat...   893   0.0  
ref|XP_007026743.1| RNA polymerase II C-terminal domain phosphat...   893   0.0  
ref|XP_010654172.1| PREDICTED: RNA polymerase II C-terminal doma...   889   0.0  
ref|XP_010654171.1| PREDICTED: RNA polymerase II C-terminal doma...   889   0.0  
ref|XP_008243929.1| PREDICTED: RNA polymerase II C-terminal doma...   888   0.0  
ref|XP_008243921.1| PREDICTED: RNA polymerase II C-terminal doma...   888   0.0  
ref|XP_008243912.1| PREDICTED: RNA polymerase II C-terminal doma...   888   0.0  
ref|XP_007026744.1| RNA polymerase II C-terminal domain phosphat...   888   0.0  
ref|XP_007204939.1| hypothetical protein PRUPE_ppa001155mg [Prun...   884   0.0  
ref|XP_010256579.1| PREDICTED: RNA polymerase II C-terminal doma...   882   0.0  
emb|CBI30403.3| unnamed protein product [Vitis vinifera]              881   0.0  
ref|XP_012087884.1| PREDICTED: RNA polymerase II C-terminal doma...   872   0.0  
gb|KJB17086.1| hypothetical protein B456_002G264300 [Gossypium r...   872   0.0  
ref|XP_012468527.1| PREDICTED: RNA polymerase II C-terminal doma...   872   0.0  
gb|KJB17084.1| hypothetical protein B456_002G264300 [Gossypium r...   872   0.0  

>ref|XP_010256577.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X2 [Nelumbo nucifera]
          Length = 861

 Score =  919 bits (2374), Expect = 0.0
 Identities = 496/815 (60%), Positives = 606/815 (74%), Gaps = 15/815 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+SCLGE EIFP K+    FPNNEIRI ++S  SERCPPLS+LQTISP
Sbjct: 1    MSRLGFKSVVYHGDSCLGEVEIFPAKNQNVQFPNNEIRINYISQPSERCPPLSVLQTISP 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLESK+      L+ LH+SC  ELKTA           VAM +KQEK  CFWCCS
Sbjct: 61   FSVRCKLESKTVVEQSPLSRLHASCFYELKTAVVLLGEEELHLVAMTSKQEKFPCFWCCS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI+ LQR+I CETD +R  GM
Sbjct: 121  VPLGLYGSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALQRRIACETDPVRVSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY++DR LLKQY E D V+DNGK LK   EEVP +S N + ++ RP+IRL ++NI
Sbjct: 181  SAELKRYVEDRMLLKQYIEGDYVMDNGKTLKVQLEEVPPLSNNHERII-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDL+SYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLIS KQLL RV+CV+SGSRKSL NVF   ICHP+MAMVIDDRL VW+DKDQPRVHVVP
Sbjct: 300  AHLISVKQLLTRVVCVRSGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AFTPYYAP AE A  VPVLCVARNVACNVR G+FK+FDE++LR+ISEL YEDE++NLP  
Sbjct: 360  AFTPYYAPLAERANPVPVLCVARNVACNVRAGYFKEFDENLLRKISELRYEDEVINLPYA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED   V N N D+P+ EG +GA+VERRLNR D+K   +    F  +NP++R
Sbjct: 420  PDVSNYLMSEDAGFVQNANRDIPISEGTNGAEVERRLNRPDEKHIVDPAPPF-TSNPNVR 478

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
            PE + + V IS + ++P   RP +PSQKP +LGA P +     P+++ D+RR++L+LQ+G
Sbjct: 479  PE-TQKLVNISPNVISPATSRPILPSQKPSILGA-PARWDIIPPELDPDLRRRLLILQHG 536

Query: 1490 QGLRDH-SSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
            Q +RD  S   P++ RPPAQ   P IQ+ GGW  V+E I+ GQ   +P G T ESD + P
Sbjct: 537  QDVRDQCSGDPPILPRPPAQASPPLIQTRGGWL-VEEDINMGQIKNQPLGFTHESDALLP 595

Query: 1313 DKFRALRNPHNQSSDASTVSEKP---CNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCD 1143
            +K R  ++ H  ++D S+V+  P    N S+   +EAY G  K++QN     QSS     
Sbjct: 596  NK-RDQQSLHYHNAD-SSVAHGPGSSSNTSKVTSDEAYPGHEKQKQNTSQSTQSS----F 649

Query: 1142 SEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDL 963
             E+D  SLN+V  NN D   E G V     T  IGVLQEIGRRCGSK+EFR +  + KD 
Sbjct: 650  PEDDEQSLNQVPGNNRDLQTEDGKVT-LFPTSVIGVLQEIGRRCGSKMEFRFIDSTIKDR 708

Query: 962  QFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNL---ANKYVAFTAPDSGTIDSDIDK 792
            ++SVEV FTGE+IG G+GKTK++A+ QAAENALH+L   A+KY+A  APDS  +D D++K
Sbjct: 709  RYSVEVWFTGERIGVGVGKTKRDAQQQAAENALHSLADYADKYMAQIAPDSEAVDKDMNK 768

Query: 791  PSVQSENGFLMDIDSSTGLAEC--KEAFPNSTNAE 693
             SV +ENGFL D+ +S  L E   +E  P+++++E
Sbjct: 769  LSVGNENGFLWDV-ASPELEEMPKEENLPDASSSE 802


>ref|XP_010256580.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X5 [Nelumbo nucifera]
            gi|720002132|ref|XP_010256582.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 2
            isoform X5 [Nelumbo nucifera]
          Length = 817

 Score =  914 bits (2363), Expect = 0.0
 Identities = 496/817 (60%), Positives = 607/817 (74%), Gaps = 16/817 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+SCLGE EIFP K+    FPNNEIRI ++S  SERCPPLS+LQTISP
Sbjct: 1    MSRLGFKSVVYHGDSCLGEVEIFPAKNQNVQFPNNEIRINYISQPSERCPPLSVLQTISP 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLESK+      L+ LH+SC  ELKTA           VAM +KQEK  CFWCCS
Sbjct: 61   FSVRCKLESKTVVEQSPLSRLHASCFYELKTAVVLLGEEELHLVAMTSKQEKFPCFWCCS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI+ LQR+I CETD +R  GM
Sbjct: 121  VPLGLYGSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALQRRIACETDPVRVSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY++DR LLKQY E D V+DNGK LK   EEVP +S N + ++ RP+IRL ++NI
Sbjct: 181  SAELKRYVEDRMLLKQYIEGDYVMDNGKTLKVQLEEVPPLSNNHERII-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDL+SYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKS-GSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVV 2028
            AHLIS KQLL RV+CV+S GSRKSL NVF   ICHP+MAMVIDDRL VW+DKDQPRVHVV
Sbjct: 300  AHLISVKQLLTRVVCVRSVGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQPRVHVV 359

Query: 2027 PAFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPS 1848
            PAFTPYYAP AE A  VPVLCVARNVACNVR G+FK+FDE++LR+ISEL YEDE++NLP 
Sbjct: 360  PAFTPYYAPLAERANPVPVLCVARNVACNVRAGYFKEFDENLLRKISELRYEDEVINLPY 419

Query: 1847 PPDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDL 1674
             PDVS+YLM ED   V N N D+P+ EG +GA+VERRLNR D+K   +    F  +NP++
Sbjct: 420  APDVSNYLMSEDAGFVQNANRDIPISEGTNGAEVERRLNRPDEKHIVDPAPPF-TSNPNV 478

Query: 1673 RPEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQN 1494
            RPE + + V IS + ++P   RP +PSQKP +LGA P +     P+++ D+RR++L+LQ+
Sbjct: 479  RPE-TQKLVNISPNVISPATSRPILPSQKPSILGA-PARWDIIPPELDPDLRRRLLILQH 536

Query: 1493 GQGLRDH-SSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQ 1317
            GQ +RD  S   P++ RPPAQ   P IQ+ GGW  V+E I+ GQ   +P G T ESD + 
Sbjct: 537  GQDVRDQCSGDPPILPRPPAQASPPLIQTRGGWL-VEEDINMGQIKNQPLGFTHESDALL 595

Query: 1316 PDKFRALRNPHNQSSDASTVSEKP---CNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVC 1146
            P+K R  ++ H  ++D S+V+  P    N S+   +EAY G  K++QN     QSS    
Sbjct: 596  PNK-RDQQSLHYHNAD-SSVAHGPGSSSNTSKVTSDEAYPGHEKQKQNTSQSTQSS---- 649

Query: 1145 DSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKD 966
              E+D  SLN+V  NN D   E G V     T  IGVLQEIGRRCGSK+EFR +  + KD
Sbjct: 650  FPEDDEQSLNQVPGNNRDLQTEDGKVT-LFPTSVIGVLQEIGRRCGSKMEFRFIDSTIKD 708

Query: 965  LQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNL---ANKYVAFTAPDSGTIDSDID 795
             ++SVEV FTGE+IG G+GKTK++A+ QAAENALH+L   A+KY+A  APDS  +D D++
Sbjct: 709  RRYSVEVWFTGERIGVGVGKTKRDAQQQAAENALHSLADYADKYMAQIAPDSEAVDKDMN 768

Query: 794  KPSVQSENGFLMDIDSSTGLAEC--KEAFPNSTNAEK 690
            K SV +ENGFL D+ +S  L E   +E  P+++++E+
Sbjct: 769  KLSVGNENGFLWDV-ASPELEEMPKEENLPDASSSEQ 804


>ref|XP_010256578.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X3 [Nelumbo nucifera]
          Length = 841

 Score =  914 bits (2362), Expect = 0.0
 Identities = 496/816 (60%), Positives = 606/816 (74%), Gaps = 16/816 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+SCLGE EIFP K+    FPNNEIRI ++S  SERCPPLS+LQTISP
Sbjct: 1    MSRLGFKSVVYHGDSCLGEVEIFPAKNQNVQFPNNEIRINYISQPSERCPPLSVLQTISP 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLESK+      L+ LH+SC  ELKTA           VAM +KQEK  CFWCCS
Sbjct: 61   FSVRCKLESKTVVEQSPLSRLHASCFYELKTAVVLLGEEELHLVAMTSKQEKFPCFWCCS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI+ LQR+I CETD +R  GM
Sbjct: 121  VPLGLYGSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALQRRIACETDPVRVSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY++DR LLKQY E D V+DNGK LK   EEVP +S N + ++ RP+IRL ++NI
Sbjct: 181  SAELKRYVEDRMLLKQYIEGDYVMDNGKTLKVQLEEVPPLSNNHERII-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDL+SYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKS-GSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVV 2028
            AHLIS KQLL RV+CV+S GSRKSL NVF   ICHP+MAMVIDDRL VW+DKDQPRVHVV
Sbjct: 300  AHLISVKQLLTRVVCVRSVGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQPRVHVV 359

Query: 2027 PAFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPS 1848
            PAFTPYYAP AE A  VPVLCVARNVACNVR G+FK+FDE++LR+ISEL YEDE++NLP 
Sbjct: 360  PAFTPYYAPLAERANPVPVLCVARNVACNVRAGYFKEFDENLLRKISELRYEDEVINLPY 419

Query: 1847 PPDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDL 1674
             PDVS+YLM ED   V N N D+P+ EG +GA+VERRLNR D+K   +    F  +NP++
Sbjct: 420  APDVSNYLMSEDAGFVQNANRDIPISEGTNGAEVERRLNRPDEKHIVDPAPPF-TSNPNV 478

Query: 1673 RPEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQN 1494
            RPE + + V IS + ++P   RP +PSQKP +LGA P +     P+++ D+RR++L+LQ+
Sbjct: 479  RPE-TQKLVNISPNVISPATSRPILPSQKPSILGA-PARWDIIPPELDPDLRRRLLILQH 536

Query: 1493 GQGLRDH-SSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQ 1317
            GQ +RD  S   P++ RPPAQ   P IQ+ GGW  V+E I+ GQ   +P G T ESD + 
Sbjct: 537  GQDVRDQCSGDPPILPRPPAQASPPLIQTRGGWL-VEEDINMGQIKNQPLGFTHESDALL 595

Query: 1316 PDKFRALRNPHNQSSDASTVSEKP---CNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVC 1146
            P+K R  ++ H  ++D S+V+  P    N S+   +EAY G  K++QN     QSS    
Sbjct: 596  PNK-RDQQSLHYHNAD-SSVAHGPGSSSNTSKVTSDEAYPGHEKQKQNTSQSTQSS---- 649

Query: 1145 DSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKD 966
              E+D  SLN+V  NN D   E G V     T  IGVLQEIGRRCGSK+EFR +  + KD
Sbjct: 650  FPEDDEQSLNQVPGNNRDLQTEDGKVT-LFPTSVIGVLQEIGRRCGSKMEFRFIDSTIKD 708

Query: 965  LQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNL---ANKYVAFTAPDSGTIDSDID 795
             ++SVEV FTGE+IG G+GKTK++A+ QAAENALH+L   A+KY+A  APDS  +D D++
Sbjct: 709  RRYSVEVWFTGERIGVGVGKTKRDAQQQAAENALHSLADYADKYMAQIAPDSEAVDKDMN 768

Query: 794  KPSVQSENGFLMDIDSSTGLAEC--KEAFPNSTNAE 693
            K SV +ENGFL D+ +S  L E   +E  P+++++E
Sbjct: 769  KLSVGNENGFLWDV-ASPELEEMPKEENLPDASSSE 803


>ref|XP_010256576.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X1 [Nelumbo nucifera]
          Length = 862

 Score =  914 bits (2362), Expect = 0.0
 Identities = 496/816 (60%), Positives = 606/816 (74%), Gaps = 16/816 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+SCLGE EIFP K+    FPNNEIRI ++S  SERCPPLS+LQTISP
Sbjct: 1    MSRLGFKSVVYHGDSCLGEVEIFPAKNQNVQFPNNEIRINYISQPSERCPPLSVLQTISP 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLESK+      L+ LH+SC  ELKTA           VAM +KQEK  CFWCCS
Sbjct: 61   FSVRCKLESKTVVEQSPLSRLHASCFYELKTAVVLLGEEELHLVAMTSKQEKFPCFWCCS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI+ LQR+I CETD +R  GM
Sbjct: 121  VPLGLYGSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALQRRIACETDPVRVSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY++DR LLKQY E D V+DNGK LK   EEVP +S N + ++ RP+IRL ++NI
Sbjct: 181  SAELKRYVEDRMLLKQYIEGDYVMDNGKTLKVQLEEVPPLSNNHERII-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDL+SYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKS-GSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVV 2028
            AHLIS KQLL RV+CV+S GSRKSL NVF   ICHP+MAMVIDDRL VW+DKDQPRVHVV
Sbjct: 300  AHLISVKQLLTRVVCVRSVGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQPRVHVV 359

Query: 2027 PAFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPS 1848
            PAFTPYYAP AE A  VPVLCVARNVACNVR G+FK+FDE++LR+ISEL YEDE++NLP 
Sbjct: 360  PAFTPYYAPLAERANPVPVLCVARNVACNVRAGYFKEFDENLLRKISELRYEDEVINLPY 419

Query: 1847 PPDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDL 1674
             PDVS+YLM ED   V N N D+P+ EG +GA+VERRLNR D+K   +    F  +NP++
Sbjct: 420  APDVSNYLMSEDAGFVQNANRDIPISEGTNGAEVERRLNRPDEKHIVDPAPPF-TSNPNV 478

Query: 1673 RPEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQN 1494
            RPE + + V IS + ++P   RP +PSQKP +LGA P +     P+++ D+RR++L+LQ+
Sbjct: 479  RPE-TQKLVNISPNVISPATSRPILPSQKPSILGA-PARWDIIPPELDPDLRRRLLILQH 536

Query: 1493 GQGLRDH-SSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQ 1317
            GQ +RD  S   P++ RPPAQ   P IQ+ GGW  V+E I+ GQ   +P G T ESD + 
Sbjct: 537  GQDVRDQCSGDPPILPRPPAQASPPLIQTRGGWL-VEEDINMGQIKNQPLGFTHESDALL 595

Query: 1316 PDKFRALRNPHNQSSDASTVSEKP---CNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVC 1146
            P+K R  ++ H  ++D S+V+  P    N S+   +EAY G  K++QN     QSS    
Sbjct: 596  PNK-RDQQSLHYHNAD-SSVAHGPGSSSNTSKVTSDEAYPGHEKQKQNTSQSTQSS---- 649

Query: 1145 DSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKD 966
              E+D  SLN+V  NN D   E G V     T  IGVLQEIGRRCGSK+EFR +  + KD
Sbjct: 650  FPEDDEQSLNQVPGNNRDLQTEDGKVT-LFPTSVIGVLQEIGRRCGSKMEFRFIDSTIKD 708

Query: 965  LQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNL---ANKYVAFTAPDSGTIDSDID 795
             ++SVEV FTGE+IG G+GKTK++A+ QAAENALH+L   A+KY+A  APDS  +D D++
Sbjct: 709  RRYSVEVWFTGERIGVGVGKTKRDAQQQAAENALHSLADYADKYMAQIAPDSEAVDKDMN 768

Query: 794  KPSVQSENGFLMDIDSSTGLAEC--KEAFPNSTNAE 693
            K SV +ENGFL D+ +S  L E   +E  P+++++E
Sbjct: 769  KLSVGNENGFLWDV-ASPELEEMPKEENLPDASSSE 803


>ref|XP_007026742.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 1
            [Theobroma cacao] gi|508715347|gb|EOY07244.1| RNA
            polymerase II C-terminal domain phosphatase-like 2
            isoform 1 [Theobroma cacao]
          Length = 862

 Score =  894 bits (2309), Expect = 0.0
 Identities = 488/832 (58%), Positives = 587/832 (70%), Gaps = 18/832 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+ CLGE +  P  D  F FPNNEIRI H+SP SERC PLS+L T+S 
Sbjct: 1    MSRLGFKSVVYHGDVCLGELDTIPVSDTNFQFPNNEIRIHHISPPSERCIPLSVLHTVSS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES SP     L  LH+SC  ELKTA           V M +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESSSPVEQPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  +  ETD +R  GM
Sbjct: 121  VPTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLARETDTIRHLGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL ++NI
Sbjct: 181  SAELRRYIDDRMLLKQYTESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWE+LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACNVRG FFK+FDE+++R+ISE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS++LMLED    PNGN   P+ EG++G +VERRLN+L++K  ++S +  V+NNP+LR
Sbjct: 420  PDVSNHLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQLEEKHVSDSSTHLVMNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPT-----------QPDMNLD 1524
             E S  PVAI  + V P      +PSQKP LLGA      PT             D + D
Sbjct: 480  YETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDYD 539

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L  +    LR+ SSV  PL+S+ PAQ+ +  I   GGW  V+E  +    N R S
Sbjct: 540  MKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWL-VEEDNNKAHLNDRSS 598

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G  +E D  + DK R  +NP + S+  S  +  P + SQ KVEEA+ G   ++QN+    
Sbjct: 599  GSAQEFDATKSDKLRN-QNPFSHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNV---- 653

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
               P      E G + N VSS  G      G +    S LSI VLQEIGRRCGSKVEFR+
Sbjct: 654  ---PPAGHLSEIGGTQNHVSSTEG------GKLNLLPSHLSISVLQEIGRRCGSKVEFRT 704

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+K+A+ QAAE ALHNLA KY+A+ AP SG +D
Sbjct: 705  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVD 764

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAEKSGALEESKRLSVV 651
             D +K S+ +ENGFL D++ ++  A  ++  P  + +E +     S   S+V
Sbjct: 765  RDFNKLSLGTENGFLWDVNPASSEALREDGLPKDSTSEVADVEPGSNSSSLV 816


>ref|XP_007026745.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 4
            [Theobroma cacao] gi|508715350|gb|EOY07247.1| RNA
            polymerase II C-terminal domain phosphatase-like 2
            isoform 4 [Theobroma cacao]
          Length = 812

 Score =  893 bits (2307), Expect = 0.0
 Identities = 485/818 (59%), Positives = 582/818 (71%), Gaps = 18/818 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+ CLGE +  P  D  F FPNNEIRI H+SP SERC PLS+L T+S 
Sbjct: 1    MSRLGFKSVVYHGDVCLGELDTIPVSDTNFQFPNNEIRIHHISPPSERCIPLSVLHTVSS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES SP     L  LH+SC  ELKTA           V M +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESSSPVEQPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  +  ETD +R  GM
Sbjct: 121  VPTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLARETDTIRHLGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL ++NI
Sbjct: 181  SAELRRYIDDRMLLKQYTESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWE+LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACNVRG FFK+FDE+++R+ISE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS++LMLED    PNGN   P+ EG++G +VERRLN+L++K  ++S +  V+NNP+LR
Sbjct: 420  PDVSNHLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQLEEKHVSDSSTHLVMNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPT-----------QPDMNLD 1524
             E S  PVAI  + V P      +PSQKP LLGA      PT             D + D
Sbjct: 480  YETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDYD 539

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L  +    LR+ SSV  PL+S+ PAQ+ +  I   GGW  V+E  +    N R S
Sbjct: 540  MKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWL-VEEDNNKAHLNDRSS 598

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G  +E D  + DK R  +NP + S+  S  +  P + SQ KVEEA+ G   ++QN+    
Sbjct: 599  GSAQEFDATKSDKLRN-QNPFSHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNV---- 653

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
               P      E G + N VSS  G      G +    S LSI VLQEIGRRCGSKVEFR+
Sbjct: 654  ---PPAGHLSEIGGTQNHVSSTEG------GKLNLLPSHLSISVLQEIGRRCGSKVEFRT 704

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+K+A+ QAAE ALHNLA KY+A+ AP SG +D
Sbjct: 705  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVD 764

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
             D +K S+ +ENGFL D++ ++  A  ++  P  + +E
Sbjct: 765  RDFNKLSLGTENGFLWDVNPASSEALREDGLPKDSTSE 802


>ref|XP_007026743.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 2
            [Theobroma cacao] gi|508715348|gb|EOY07245.1| RNA
            polymerase II C-terminal domain phosphatase-like 2
            isoform 2 [Theobroma cacao]
          Length = 840

 Score =  893 bits (2307), Expect = 0.0
 Identities = 485/818 (59%), Positives = 582/818 (71%), Gaps = 18/818 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+ CLGE +  P  D  F FPNNEIRI H+SP SERC PLS+L T+S 
Sbjct: 1    MSRLGFKSVVYHGDVCLGELDTIPVSDTNFQFPNNEIRIHHISPPSERCIPLSVLHTVSS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES SP     L  LH+SC  ELKTA           V M +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESSSPVEQPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  +  ETD +R  GM
Sbjct: 121  VPTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLARETDTIRHLGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL ++NI
Sbjct: 181  SAELRRYIDDRMLLKQYTESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWE+LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACNVRG FFK+FDE+++R+ISE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS++LMLED    PNGN   P+ EG++G +VERRLN+L++K  ++S +  V+NNP+LR
Sbjct: 420  PDVSNHLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQLEEKHVSDSSTHLVMNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPT-----------QPDMNLD 1524
             E S  PVAI  + V P      +PSQKP LLGA      PT             D + D
Sbjct: 480  YETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDYD 539

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L  +    LR+ SSV  PL+S+ PAQ+ +  I   GGW  V+E  +    N R S
Sbjct: 540  MKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWL-VEEDNNKAHLNDRSS 598

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G  +E D  + DK R  +NP + S+  S  +  P + SQ KVEEA+ G   ++QN+    
Sbjct: 599  GSAQEFDATKSDKLRN-QNPFSHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNV---- 653

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
               P      E G + N VSS  G      G +    S LSI VLQEIGRRCGSKVEFR+
Sbjct: 654  ---PPAGHLSEIGGTQNHVSSTEG------GKLNLLPSHLSISVLQEIGRRCGSKVEFRT 704

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+K+A+ QAAE ALHNLA KY+A+ AP SG +D
Sbjct: 705  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAVD 764

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
             D +K S+ +ENGFL D++ ++  A  ++  P  + +E
Sbjct: 765  RDFNKLSLGTENGFLWDVNPASSEALREDGLPKDSTSE 802


>ref|XP_010654172.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X2 [Vitis vinifera]
          Length = 855

 Score =  889 bits (2298), Expect = 0.0
 Identities = 480/823 (58%), Positives = 590/823 (71%), Gaps = 9/823 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE +  P KD  F FPNNEIR+ H+SP SERCPPLSIL TIS 
Sbjct: 1    MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLES SP     L  LH+SC  ELKTA           VAM +KQ+K  CFWC S
Sbjct: 61   FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY+S L MLNLRCLAIVFDLDETLIVANTMKSFEDRI+ L+  I  E+D +R  GM
Sbjct: 121  VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY+DDRALLKQY+E+D V+DNGK+LK   EEV  +S + + VV RP+IR  ++NI
Sbjct: 181  SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVV-RPVIRFPERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDRLKVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             FTPYYAPQAE    VP+LCVARNVACNVR GFFK+FDE+ILR+ISEL+YEDE+VNLPS 
Sbjct: 360  PFTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED   VPNGN ++P+ EG+ GA+VERRLN+ D+K   +S +S + N+ + R
Sbjct: 420  PDVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPDEKHIVDSAASPIANSYEFR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             E    P     + V P   R  MPSQKP LLGA P +   +  + + DM+R++L++++G
Sbjct: 480  SETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGA-PIKRDFSSFESDADMKRRLLIMKHG 538

Query: 1490 QGLRDHS-SVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
            Q +R+ S    P++SR P Q+    +   G W  V++  + G  N R SG+ +E+D ++P
Sbjct: 539  QDVRNQSLGDPPILSRLP-QISTSSLHPQGVWL-VEDDSNRGHLNNRASGLVQEADVLKP 596

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            DK R  + P   ++  ST      ++ Q K +E    + ++++NL   +Q S GV  ++ 
Sbjct: 597  DKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNLPPASQPSVGVSQNQ- 655

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
                    +S  G    EAG V      LSIGVLQEIGRRC SKVEFRSVV ++KDLQFS
Sbjct: 656  --------ASTTGREQTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFS 707

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMGKT+K+A+ QAAENALH+LA+KYVA+T P SG +D D DK S+ +E
Sbjct: 708  VEVLFTGEKIGVGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNE 767

Query: 773  NGFLMDIDSSTGLAE--CKEAFPNSTNAEKSGALEESKRLSVV 651
            NGFL D  +S G +E   ++ FP  + +E       +   SVV
Sbjct: 768  NGFLWD-TTSAGSSELLMEDGFPKESISEAGEMAHGTTSSSVV 809


>ref|XP_010654171.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X1 [Vitis vinifera]
          Length = 856

 Score =  889 bits (2297), Expect = 0.0
 Identities = 483/823 (58%), Positives = 592/823 (71%), Gaps = 9/823 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE +  P KD  F FPNNEIR+ H+SP SERCPPLSIL TIS 
Sbjct: 1    MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLES SP     L  LH+SC  ELKTA           VAM +KQ+K  CFWC S
Sbjct: 61   FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY+S L MLNLRCLAIVFDLDETLIVANTMKSFEDRI+ L+  I  E+D +R  GM
Sbjct: 121  VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY+DDRALLKQY+E+D V+DNGK+LK   EEV  +S + + VV RP+IR  ++NI
Sbjct: 181  SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVV-RPVIRFPERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDRLKVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             FTPYYAPQAE    VP+LCVARNVACNVR GFFK+FDE+ILR+ISEL+YEDE+VNLPS 
Sbjct: 360  PFTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED   VPNGN ++P+ EG+ GA+VERRLN+ D+K   +S +S + N+ + R
Sbjct: 420  PDVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPDEKHIVDSAASPIANSYEFR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             E    P     + V P   R  MPSQKP LLGA P +   +  + + DM+R++L++++G
Sbjct: 480  SETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGA-PIKRDFSSFESDADMKRRLLIMKHG 538

Query: 1490 QGLRDHS-SVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
            Q +R+ S    P++SR P Q+    +   G W  V++  + G  N R SG+ +E+D ++P
Sbjct: 539  QDVRNQSLGDPPILSRLP-QISTSSLHPQGVWL-VEDDSNRGHLNNRASGLVQEADVLKP 596

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            DK R  + P   ++  ST      ++ Q K +E    + ++++NL  P  S P      E
Sbjct: 597  DKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNL--PPASQP-----SE 649

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
             G+S N+ +S  G    EAG V      LSIGVLQEIGRRC SKVEFRSVV ++KDLQFS
Sbjct: 650  VGVSQNQ-ASTTGREQTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFS 708

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMGKT+K+A+ QAAENALH+LA+KYVA+T P SG +D D DK S+ +E
Sbjct: 709  VEVLFTGEKIGVGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNE 768

Query: 773  NGFLMDIDSSTGLAE--CKEAFPNSTNAEKSGALEESKRLSVV 651
            NGFL D  +S G +E   ++ FP  + +E       +   SVV
Sbjct: 769  NGFLWD-TTSAGSSELLMEDGFPKESISEAGEMAHGTTSSSVV 810


>ref|XP_008243929.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X3 [Prunus mume]
          Length = 806

 Score =  888 bits (2295), Expect = 0.0
 Identities = 479/787 (60%), Positives = 576/787 (73%), Gaps = 7/787 (0%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVVFHG+ CLGE +  P KD KF FPNNEIRI H+S  SERCPPLSILQTIS 
Sbjct: 1    MSRLGFKSVVFHGDLCLGELDAIPVKDQKFQFPNNEIRINHISQQSERCPPLSILQTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
             S+ CKLES SP     L  LH+ C  E KTA           VAM +KQ+K  CFWC +
Sbjct: 61   VSVRCKLESTSPVEQNHLINLHACCFYEFKTAVVVVGGEEIHLVAMPSKQKKFPCFWCYA 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY++ L MLNLRCL+IVFDLDETLIVANTMKSF+DRIE L+  I  E+D++R  GM
Sbjct: 121  VPVGLYSASLRMLNLRCLSIVFDLDETLIVANTMKSFDDRIEALRSWIARESDMVRIAGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AE+KRYMDDR LLKQY ++D VVDNGKV K   E+VP +S N + +V RPIIRL +KNI
Sbjct: 181  SAEMKRYMDDRWLLKQYIDNDCVVDNGKVYKVQQEDVPPLSDNHEKIV-RPIIRLPEKNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            +HLI SKQLLDRV+CVK+GSRKSL NVF   +CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  SHLIGSKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AFTPYYAPQAE A+ VPVLCVARNVACNVRG FFK+FDE +LRRISE++YEDE+VNLP  
Sbjct: 360  AFTPYYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED     NGN++ PV EG++G +V RR+N+ D K G +  +  + N+ + R
Sbjct: 420  PDVSNYLMSEDAGLATNGNVNAPVSEGMNGGEVARRINQSDDKFGTDLVAHSLKNHAEAR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             + S  PVAI  + V     RP MPSQKPGLLG   R+   +  D + +M+R +L    G
Sbjct: 480  SDNSQAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRR--DSFSDRDYEMKRGLLGTNPG 537

Query: 1490 QGLRDHSSVGPL-ISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
              +R+ +S   L +SR PAQ+ A  I + GGW  VD+  + G  + RPSG  +  D ++ 
Sbjct: 538  LDMRNQTSAELLHLSRVPAQMPASSIHAQGGWL-VDDDNNRGIPSNRPSGFVQPPDIIKS 596

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            +K    +NP + ++ +ST S    + S  K EE   G   ++QNL  P+Q S       E
Sbjct: 597  EKL-VHQNPFSPATPSSTPSGLLSHKSDVKREEVCSGQDLQKQNLPPPSQLS-------E 648

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
             G S N+ SS N +S LE   V    S LSIGVLQEIGRRC SKVEFRSVV ++ DLQFS
Sbjct: 649  AGASQNQASSFNRESQLETAKVNLLPSPLSIGVLQEIGRRCSSKVEFRSVVSTSNDLQFS 708

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMG+T+K+A+ QAAENALH+LA+KYVA+ AP SG +D DIDK SV +E
Sbjct: 709  VEVLFTGEKIGFGMGRTRKDAQQQAAENALHSLADKYVAYLAPRSGAVDRDIDKVSVGNE 768

Query: 773  NGFLMDI 753
            NGF++DI
Sbjct: 769  NGFVLDI 775


>ref|XP_008243921.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X2 [Prunus mume]
          Length = 821

 Score =  888 bits (2295), Expect = 0.0
 Identities = 479/787 (60%), Positives = 576/787 (73%), Gaps = 7/787 (0%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVVFHG+ CLGE +  P KD KF FPNNEIRI H+S  SERCPPLSILQTIS 
Sbjct: 1    MSRLGFKSVVFHGDLCLGELDAIPVKDQKFQFPNNEIRINHISQQSERCPPLSILQTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
             S+ CKLES SP     L  LH+ C  E KTA           VAM +KQ+K  CFWC +
Sbjct: 61   VSVRCKLESTSPVEQNHLINLHACCFYEFKTAVVVVGGEEIHLVAMPSKQKKFPCFWCYA 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY++ L MLNLRCL+IVFDLDETLIVANTMKSF+DRIE L+  I  E+D++R  GM
Sbjct: 121  VPVGLYSASLRMLNLRCLSIVFDLDETLIVANTMKSFDDRIEALRSWIARESDMVRIAGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AE+KRYMDDR LLKQY ++D VVDNGKV K   E+VP +S N + +V RPIIRL +KNI
Sbjct: 181  SAEMKRYMDDRWLLKQYIDNDCVVDNGKVYKVQQEDVPPLSDNHEKIV-RPIIRLPEKNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            +HLI SKQLLDRV+CVK+GSRKSL NVF   +CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  SHLIGSKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AFTPYYAPQAE A+ VPVLCVARNVACNVRG FFK+FDE +LRRISE++YEDE+VNLP  
Sbjct: 360  AFTPYYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED     NGN++ PV EG++G +V RR+N+ D K G +  +  + N+ + R
Sbjct: 420  PDVSNYLMSEDAGLATNGNVNAPVSEGMNGGEVARRINQSDDKFGTDLVAHSLKNHAEAR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             + S  PVAI  + V     RP MPSQKPGLLG   R+   +  D + +M+R +L    G
Sbjct: 480  SDNSQAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRR--DSFSDRDYEMKRGLLGTNPG 537

Query: 1490 QGLRDHSSVGPL-ISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
              +R+ +S   L +SR PAQ+ A  I + GGW  VD+  + G  + RPSG  +  D ++ 
Sbjct: 538  LDMRNQTSAELLHLSRVPAQMPASSIHAQGGWL-VDDDNNRGIPSNRPSGFVQPPDIIKS 596

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            +K    +NP + ++ +ST S    + S  K EE   G   ++QNL  P+Q S       E
Sbjct: 597  EKL-VHQNPFSPATPSSTPSGLLSHKSDVKREEVCSGQDLQKQNLPPPSQLS-------E 648

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
             G S N+ SS N +S LE   V    S LSIGVLQEIGRRC SKVEFRSVV ++ DLQFS
Sbjct: 649  AGASQNQASSFNRESQLETAKVNLLPSPLSIGVLQEIGRRCSSKVEFRSVVSTSNDLQFS 708

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMG+T+K+A+ QAAENALH+LA+KYVA+ AP SG +D DIDK SV +E
Sbjct: 709  VEVLFTGEKIGFGMGRTRKDAQQQAAENALHSLADKYVAYLAPRSGAVDRDIDKVSVGNE 768

Query: 773  NGFLMDI 753
            NGF++DI
Sbjct: 769  NGFVLDI 775


>ref|XP_008243912.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X1 [Prunus mume]
          Length = 856

 Score =  888 bits (2295), Expect = 0.0
 Identities = 479/787 (60%), Positives = 576/787 (73%), Gaps = 7/787 (0%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVVFHG+ CLGE +  P KD KF FPNNEIRI H+S  SERCPPLSILQTIS 
Sbjct: 1    MSRLGFKSVVFHGDLCLGELDAIPVKDQKFQFPNNEIRINHISQQSERCPPLSILQTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
             S+ CKLES SP     L  LH+ C  E KTA           VAM +KQ+K  CFWC +
Sbjct: 61   VSVRCKLESTSPVEQNHLINLHACCFYEFKTAVVVVGGEEIHLVAMPSKQKKFPCFWCYA 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY++ L MLNLRCL+IVFDLDETLIVANTMKSF+DRIE L+  I  E+D++R  GM
Sbjct: 121  VPVGLYSASLRMLNLRCLSIVFDLDETLIVANTMKSFDDRIEALRSWIARESDMVRIAGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AE+KRYMDDR LLKQY ++D VVDNGKV K   E+VP +S N + +V RPIIRL +KNI
Sbjct: 181  SAEMKRYMDDRWLLKQYIDNDCVVDNGKVYKVQQEDVPPLSDNHEKIV-RPIIRLPEKNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            +HLI SKQLLDRV+CVK+GSRKSL NVF   +CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  SHLIGSKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AFTPYYAPQAE A+ VPVLCVARNVACNVRG FFK+FDE +LRRISE++YEDE+VNLP  
Sbjct: 360  AFTPYYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED     NGN++ PV EG++G +V RR+N+ D K G +  +  + N+ + R
Sbjct: 420  PDVSNYLMSEDAGLATNGNVNAPVSEGMNGGEVARRINQSDDKFGTDLVAHSLKNHAEAR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             + S  PVAI  + V     RP MPSQKPGLLG   R+   +  D + +M+R +L    G
Sbjct: 480  SDNSQAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRR--DSFSDRDYEMKRGLLGTNPG 537

Query: 1490 QGLRDHSSVGPL-ISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
              +R+ +S   L +SR PAQ+ A  I + GGW  VD+  + G  + RPSG  +  D ++ 
Sbjct: 538  LDMRNQTSAELLHLSRVPAQMPASSIHAQGGWL-VDDDNNRGIPSNRPSGFVQPPDIIKS 596

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            +K    +NP + ++ +ST S    + S  K EE   G   ++QNL  P+Q S       E
Sbjct: 597  EKL-VHQNPFSPATPSSTPSGLLSHKSDVKREEVCSGQDLQKQNLPPPSQLS-------E 648

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
             G S N+ SS N +S LE   V    S LSIGVLQEIGRRC SKVEFRSVV ++ DLQFS
Sbjct: 649  AGASQNQASSFNRESQLETAKVNLLPSPLSIGVLQEIGRRCSSKVEFRSVVSTSNDLQFS 708

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMG+T+K+A+ QAAENALH+LA+KYVA+ AP SG +D DIDK SV +E
Sbjct: 709  VEVLFTGEKIGFGMGRTRKDAQQQAAENALHSLADKYVAYLAPRSGAVDRDIDKVSVGNE 768

Query: 773  NGFLMDI 753
            NGF++DI
Sbjct: 769  NGFVLDI 775


>ref|XP_007026744.1| RNA polymerase II C-terminal domain phosphatase-like 2 isoform 3
            [Theobroma cacao] gi|508715349|gb|EOY07246.1| RNA
            polymerase II C-terminal domain phosphatase-like 2
            isoform 3 [Theobroma cacao]
          Length = 841

 Score =  888 bits (2295), Expect = 0.0
 Identities = 485/819 (59%), Positives = 582/819 (71%), Gaps = 19/819 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+ CLGE +  P  D  F FPNNEIRI H+SP SERC PLS+L T+S 
Sbjct: 1    MSRLGFKSVVYHGDVCLGELDTIPVSDTNFQFPNNEIRIHHISPPSERCIPLSVLHTVSS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES SP     L  LH+SC  ELKTA           V M +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESSSPVEQPHLIHLHASCFYELKTAVVLVGDEEVHLVPMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  +  ETD +R  GM
Sbjct: 121  VPTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLARETDTIRHLGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL ++NI
Sbjct: 181  SAELRRYIDDRMLLKQYTESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWE+LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACNVRG FFK+FDE+++R+ISE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNVRGLFFKEFDENVIRKISEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS++LMLED    PNGN   P+ EG++G +VERRLN+L++K  ++S +  V+NNP+LR
Sbjct: 420  PDVSNHLMLEDAGFAPNGNGGAPISEGMNGVEVERRLNQLEEKHVSDSSTHLVMNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPT-----------QPDMNLD 1524
             E S  PVAI  + V P      +PSQKP LLGA      PT             D + D
Sbjct: 480  YETSQPPVAIVPNVVGPASLTAPLPSQKPSLLGAPGLLSAPTLLGASVRRESNTIDSDYD 539

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L  +    LR+ SSV  PL+S+ PAQ+ +  I   GGW  V+E  +    N R S
Sbjct: 540  MKRRALGSKQTLDLRNQSSVQPPLLSKVPAQISSSSILPQGGWL-VEEDNNKAHLNDRSS 598

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G  +E D  + DK R  +NP + S+  S  +  P + SQ KVEEA+ G   ++QN+    
Sbjct: 599  GSAQEFDATKSDKLRN-QNPFSHSAPGSVSTGLPSHASQVKVEEAHAGLDTQKQNV---- 653

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGS-KVEFR 990
               P      E G + N VSS  G      G +    S LSI VLQEIGRRCGS KVEFR
Sbjct: 654  ---PPAGHLSEIGGTQNHVSSTEG------GKLNLLPSHLSISVLQEIGRRCGSKKVEFR 704

Query: 989  SVVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTI 810
            +VV ++KDLQFSVEV+FTGEKIG GMGKT+K+A+ QAAE ALHNLA KY+A+ AP SG +
Sbjct: 705  TVVSTSKDLQFSVEVLFTGEKIGVGMGKTRKDAQQQAAELALHNLAEKYLAYIAPRSGAV 764

Query: 809  DSDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
            D D +K S+ +ENGFL D++ ++  A  ++  P  + +E
Sbjct: 765  DRDFNKLSLGTENGFLWDVNPASSEALREDGLPKDSTSE 803


>ref|XP_007204939.1| hypothetical protein PRUPE_ppa001155mg [Prunus persica]
            gi|462400581|gb|EMJ06138.1| hypothetical protein
            PRUPE_ppa001155mg [Prunus persica]
          Length = 893

 Score =  884 bits (2285), Expect = 0.0
 Identities = 485/824 (58%), Positives = 582/824 (70%), Gaps = 44/824 (5%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVVFHG+ CLGE +  P KD KF FPNNEIRI  +S  SERCPPLSILQTIS 
Sbjct: 1    MSRLGFKSVVFHGDLCLGELDAIPVKDQKFQFPNNEIRINRISQQSERCPPLSILQTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLES SP     L  LH+ C  E KTA           VAM +KQ+K  CFWC +
Sbjct: 61   FSVRCKLESTSPVEQPHLINLHACCFYEFKTAVVVVGGEEIHLVAMPSKQKKFPCFWCYA 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY++ L MLNLRCL+IVFDLDETLIVANTMKSF+DRIE L+  I  E+D++R  GM
Sbjct: 121  VPVGLYSASLRMLNLRCLSIVFDLDETLIVANTMKSFDDRIEALRSWIARESDMVRIAGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AE+KRYMDDR LLKQY ++D VVDNGKV K   E+VP +S N + +V RPIIRL DKNI
Sbjct: 181  SAEMKRYMDDRWLLKQYIDNDCVVDNGKVYKVQQEDVPPLSDNHEKIV-RPIIRLPDKNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            +HLI SKQLLDRV+CVK+GSRKSL NVF   +CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  SHLIGSKQLLDRVVCVKTGSRKSLLNVFQHGVCHPKMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AFTPYYAPQAE A+ VPVLCVARNVACNVRG FFK+FDE +LRRISE++YEDE+VNLP  
Sbjct: 360  AFTPYYAPQAETASPVPVLCVARNVACNVRGCFFKEFDEILLRRISEVFYEDEVVNLPPA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED     NGN++ PV EG++G +V RR+N+ D K G +S +  + N+ + R
Sbjct: 420  PDVSNYLMSEDAGLATNGNVNAPVSEGMNGGEVARRINQSDDKFGTDSVAHSLKNHAEAR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             + S  PVAI  + V     RP MPSQKPGLLG   R+   +  D + +M+R +L    G
Sbjct: 480  SDNSPAPVAILPNVVGAASSRPVMPSQKPGLLGPPVRR--DSFSDRDYEMKRGLLGTNPG 537

Query: 1490 QGLRDHSSVG-PLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
              +R+ +S   P +SR PAQ+ A  I + GGW  VD+  + G  + RPSG  +  D ++ 
Sbjct: 538  LDMRNQTSAELPHLSRVPAQMPASSIHAQGGWL-VDDDNNRGPPSNRPSGFVQPPDIIKS 596

Query: 1313 DKFRALRNPHNQSSDASTVS----------EKPCNISQEKV------------------- 1221
            +K    +NP N ++ +ST S          + P  I  EK+                   
Sbjct: 597  EKL-VHQNPFNPATPSSTPSGPSNRPSGFVQPPDIIKSEKLVHQNPFSPATPSSTPSGLL 655

Query: 1220 --------EEAYLGDGKRRQNLVNPAQSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVA 1065
                    EE   G   ++QNL  P+Q S       E G S N+ SS N +SHLE+  V 
Sbjct: 656  SHKSDVKREEVCSGQDLQKQNLPPPSQLS-------EAGASQNQASSFNRESHLESAKVN 708

Query: 1064 PQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARL 885
               S LSIGVLQEIGRRC SKVEFRSVV ++ DLQFSVEV+FTGEKIG GMG+T+K+A+ 
Sbjct: 709  LLPSPLSIGVLQEIGRRCSSKVEFRSVVSTSNDLQFSVEVLFTGEKIGFGMGRTRKDAQQ 768

Query: 884  QAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSENGFLMDI 753
            QAAENALH+LA+KYVA+ AP SG +D DIDK SV +ENGF++DI
Sbjct: 769  QAAENALHSLADKYVAYLAPRSGAVDRDIDKVSVGNENGFVLDI 812


>ref|XP_010256579.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X4 [Nelumbo nucifera]
          Length = 832

 Score =  882 bits (2280), Expect = 0.0
 Identities = 473/766 (61%), Positives = 570/766 (74%), Gaps = 11/766 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HG+SCLGE EIFP K+    FPNNEIRI ++S  SERCPPLS+LQTISP
Sbjct: 1    MSRLGFKSVVYHGDSCLGEVEIFPAKNQNVQFPNNEIRINYISQPSERCPPLSVLQTISP 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLESK+      L+ LH+SC  ELKTA           VAM +KQEK  CFWCCS
Sbjct: 61   FSVRCKLESKTVVEQSPLSRLHASCFYELKTAVVLLGEEELHLVAMTSKQEKFPCFWCCS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY SCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRI+ LQR+I CETD +R  GM
Sbjct: 121  VPLGLYGSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALQRRIACETDPVRVSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY++DR LLKQY E D V+DNGK LK   EEVP +S N + ++ RP+IRL ++NI
Sbjct: 181  SAELKRYVEDRMLLKQYIEGDYVMDNGKTLKVQLEEVPPLSNNHERII-RPVIRLQERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDL+SYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLKSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKS-GSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVV 2028
            AHLIS KQLL RV+CV+S GSRKSL NVF   ICHP+MAMVIDDRL VW+DKDQPRVHVV
Sbjct: 300  AHLISVKQLLTRVVCVRSVGSRKSLLNVFQDGICHPKMAMVIDDRLNVWEDKDQPRVHVV 359

Query: 2027 PAFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPS 1848
            PAFTPYYAP AE A  VPVLCVARNVACNVR G+FK+FDE++LR+ISEL YEDE++NLP 
Sbjct: 360  PAFTPYYAPLAERANPVPVLCVARNVACNVRAGYFKEFDENLLRKISELRYEDEVINLPY 419

Query: 1847 PPDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDL 1674
             PDVS+YLM ED   V N N D+P+ EG +GA+VERRLNR D+K   +    F  +NP++
Sbjct: 420  APDVSNYLMSEDAGFVQNANRDIPISEGTNGAEVERRLNRPDEKHIVDPAPPF-TSNPNV 478

Query: 1673 RPEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQN 1494
            RPE + + V IS + ++P   RP +PSQKP +LGA P +     P+++ D+RR++L+LQ+
Sbjct: 479  RPE-TQKLVNISPNVISPATSRPILPSQKPSILGA-PARWDIIPPELDPDLRRRLLILQH 536

Query: 1493 GQGLRDH-SSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQ 1317
            GQ +RD  S   P++ RPPAQ   P IQ+ GGW  V+E I+ GQ   +P G T ESD + 
Sbjct: 537  GQDVRDQCSGDPPILPRPPAQASPPLIQTRGGWL-VEEDINMGQIKNQPLGFTHESDALL 595

Query: 1316 PDKFRALRNPHNQSSDASTVSEKP---CNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVC 1146
            P+K R  ++ H  ++D S+V+  P    N S+   +EAY G  K++QN     QSS    
Sbjct: 596  PNK-RDQQSLHYHNAD-SSVAHGPGSSSNTSKVTSDEAYPGHEKQKQNTSQSTQSS---- 649

Query: 1145 DSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKD 966
              E+D  SLN+V  NN D   E G V     T  IGVLQEIGRRCGSK+EFR +  + KD
Sbjct: 650  FPEDDEQSLNQVPGNNRDLQTEDGKVT-LFPTSVIGVLQEIGRRCGSKMEFRFIDSTIKD 708

Query: 965  LQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTA 828
             ++SVEV FTGE+IG G+GKTK++A+ QAAENALH+LA   +   A
Sbjct: 709  RRYSVEVWFTGERIGVGVGKTKRDAQQQAAENALHSLAEAMIGVDA 754


>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  881 bits (2276), Expect = 0.0
 Identities = 482/823 (58%), Positives = 589/823 (71%), Gaps = 9/823 (1%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE +  P KD  F FPNNEIR+ H+SP SERCPPLSIL TIS 
Sbjct: 1    MSRLGFKSLVYHGDLFLGELDAIPVKDQSFQFPNNEIRVHHISPISERCPPLSILHTISS 60

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            FS+ CKLES SP     L  LH+SC  ELKTA           VAM +KQ+K  CFWC S
Sbjct: 61   FSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKFPCFWCYS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY+S L MLNLRCLAIVFDLDETLIVANTMKSFEDRI+ L+  I  E+D +R  GM
Sbjct: 121  VPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRISGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY+DDRALLKQY+E+D V+DNGK+LK   EEV  +S + + VV RP+IR  ++NI
Sbjct: 181  SAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVV-RPVIRFPERNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDPE 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDRLKVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             FTPYYAPQAE    VP+LCVARNVACNVR GFFK+FDE+ILR+ISEL+YEDE+VNLPS 
Sbjct: 360  PFTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPSA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM ED   VPNGN ++P+ EG+ GA+VERRLN   Q    +S +S + N+ + R
Sbjct: 420  PDVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLN---QPHIVDSAASPIANSYEFR 476

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             E    P     + V P   R  MPSQKP LLGA P +   +  + + DM+R++L++++G
Sbjct: 477  SETLQPPALTVQNVVGPTSSRLLMPSQKPSLLGA-PIKRDFSSFESDADMKRRLLIMKHG 535

Query: 1490 QGLRDHS-SVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQP 1314
            Q +R+ S    P++SR P Q+    +   G W  V++  + G  N R SG+ +E+D ++P
Sbjct: 536  QDVRNQSLGDPPILSRLP-QISTSSLHPQGVWL-VEDDSNRGHLNNRASGLVQEADVLKP 593

Query: 1313 DKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEE 1134
            DK R  + P   ++  ST      ++ Q K +E    + ++++NL  P  S P      E
Sbjct: 594  DKQRGHQIPFGHNTPGSTPVSLLPHLPQLKNDEVSAANERQKKNL--PPASQP-----SE 646

Query: 1133 DGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFS 954
             G+S N+ +S  G    EAG V      LSIGVLQEIGRRC SKVEFRSVV ++KDLQFS
Sbjct: 647  VGVSQNQ-ASTTGREQTEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFS 705

Query: 953  VEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSE 774
            VEV+FTGEKIG GMGKT+K+A+ QAAENALH+LA+KYVA+T P SG +D D DK S+ +E
Sbjct: 706  VEVLFTGEKIGVGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNE 765

Query: 773  NGFLMDIDSSTGLAE--CKEAFPNSTNAEKSGALEESKRLSVV 651
            NGFL D  +S G +E   ++ FP  + +E       +   SVV
Sbjct: 766  NGFLWD-TTSAGSSELLMEDGFPKESISEAGEMAHGTTSSSVV 807


>ref|XP_012087884.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            [Jatropha curcas]
          Length = 830

 Score =  872 bits (2254), Expect = 0.0
 Identities = 478/807 (59%), Positives = 566/807 (70%), Gaps = 7/807 (0%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KSVV+HGE CLGE +  P  D  F FPNNEIRI  +S  SERCPPLSILQTIS 
Sbjct: 1    MSRLGFKSVVYHGELCLGELDAIPVTDQNFQFPNNEIRIHRISQ-SERCPPLSILQTISS 59

Query: 2912 FSIPCKLESKSPA----LNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            +S+ CKLES SP     L  LH+SC  E KTA           VAM +KQ+K  CFWC +
Sbjct: 60   YSVRCKLESSSPLEQPHLINLHASCFHEFKTAVVLTGDEEIHLVAMPSKQKKFPCFWCFT 119

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            VP GLY+SCLGMLNLRCL+IVFDLDETLIVANTMKSFEDRIE L   I  E D +R  GM
Sbjct: 120  VPVGLYDSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALNIWIAREIDPVRISGM 179

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AELKRY+DDR LLKQY+E+DQV+DNGKVLK   EEVPQ+S   + +V RP+IRL D++I
Sbjct: 180  SAELKRYVDDRMLLKQYAENDQVMDNGKVLKVQLEEVPQLSETHERLV-RPVIRLQDRHI 238

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
Sbjct: 239  VLTRINPEIRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 298

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            +HLI+ KQL  RV+CVKSGSRKSL +VF   +CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 299  SHLIAPKQLQQRVVCVKSGSRKSLSHVFQDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVP 358

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
            AF PYYAPQAEMA AVPVLCVARNVACNVRG FFK+FDE++LRRISE++YEDE++NLP  
Sbjct: 359  AFMPYYAPQAEMANAVPVLCVARNVACNVRGCFFKEFDENLLRRISEVFYEDEVINLPPA 418

Query: 1844 PDVSDYLMLED--TVPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+Y+M ED   VPNGN + P  EG+SG +VERRLN+LD+K   +S +  + NN +LR
Sbjct: 419  PDVSNYMMSEDAGVVPNGNSNAPFHEGMSGVEVERRLNQLDEKNAIDSAAHSMTNNSELR 478

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGASPRQVGPTQPDMNLDMRRKILMLQNG 1491
             E +  P AI  + V P       P QKP LLGA               MRR +    +G
Sbjct: 479  SEITQPPAAIIPNIVGPMSSTTFAPLQKPSLLGA--------------PMRRDLRNPNSG 524

Query: 1490 QGLRDHSSVGPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPSGVTRESDFVQPD 1311
            Q         PL+SR PA +    IQ  GGW  ++E  +  Q N RPSG  +ES+ ++ D
Sbjct: 525  Q--------PPLLSRVPALIPPSSIQPQGGW--LEEDFNRAQMNNRPSGFAQESESLKSD 574

Query: 1310 KFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPAQSSPGVCDSEED 1131
            K RAL+NP   S+ AS  +    ++ Q K EE+  G   ++Q+        P    S E 
Sbjct: 575  KLRALQNPFVLSTPASASTVLVSHVLQVKGEESIAGHDIQKQS------PPPASGHSSEV 628

Query: 1130 GMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRSVVGSAKDLQFSV 951
            G     VS N+ +   EA  +      LSIGVLQEIGRRC SKVEFRSVV ++KDLQFSV
Sbjct: 629  G-----VSQNSKEFQPEAVKLNLLTPNLSIGVLQEIGRRCNSKVEFRSVVSTSKDLQFSV 683

Query: 950  EVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTIDSDIDKPSVQSEN 771
            EV+FTGEKIG GMGKT+K+A  QAAENALH+LA KYVA+  P SG +D D DK S+  EN
Sbjct: 684  EVLFTGEKIGVGMGKTRKDAHQQAAENALHSLAEKYVAYITPQSGAVDHDFDKLSLGKEN 743

Query: 770  GFLMDI-DSSTGLAECKEAFPNSTNAE 693
            GFL DI +  +   E ++  P    +E
Sbjct: 744  GFLWDIVNPGSSEVEPEDGLPKERTSE 770


>gb|KJB17086.1| hypothetical protein B456_002G264300 [Gossypium raimondii]
            gi|763749648|gb|KJB17087.1| hypothetical protein
            B456_002G264300 [Gossypium raimondii]
          Length = 815

 Score =  872 bits (2252), Expect = 0.0
 Identities = 477/818 (58%), Positives = 576/818 (70%), Gaps = 18/818 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE    P  D  F FPNNEIRI H+SP SERC PLSIL TIS 
Sbjct: 1    MSRLGFKSMVYHGDFFLGELNTIPITDSNFQFPNNEIRIHHISPTSERCIPLSILHTISS 60

Query: 2912 FSIPCKLES----KSPALNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES    + P L  LH+SC  E KTA           VAM +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESPFPVEQPHLIHLHASCFYEFKTAVVLVGDEEVHLVAMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            V  GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  I  E+D +R  GM
Sbjct: 121  VSTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEVLRGWIARESDPIRLSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL D+NI
Sbjct: 181  SAELRRYIDDRLLLKQYAESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQDRNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAW++LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP 
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWDELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPG 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACN RG FFK+FDE++LR++SE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNARGLFFKEFDENVLRKMSEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM E+     NGN   P+ EG++GA+VERR+N+ ++K   +S +  V NNP+LR
Sbjct: 420  PDVSNYLMSEEASFASNGNNGAPICEGMNGAEVERRMNQSEEKHVLDSSTRPVTNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGA-----SPRQVGPT-QPDMN-----LD 1524
             E S  PV   +  V P      +PSQKP +LGA     +P  +G + + D N      D
Sbjct: 480  SETSQPPV---TDIVGPASSVAPLPSQKPSILGAPGLLSNPMMLGASVRRDNNGSEGDYD 536

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L ++    LR+ SS+  PL+ + P Q  +  +   GGW  V+E I+    N RPS
Sbjct: 537  MKRRALGIKQSLDLRNQSSIQPPLLPKFPIQTSSSSVVPQGGWL-VEEDINESHLNDRPS 595

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G T+ESD ++ DK R  +NP   ++  S  +  P   SQ K+EEA  G    +QN++  A
Sbjct: 596  GTTQESDVLKSDKLRGYQNPFPHTAPGSVSTGLPSYASQVKIEEARTGLDTPKQNVLPTA 655

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
              S       E G + N + S   +   E G +    S LSIGVLQEIGRRCGSKVEFRS
Sbjct: 656  HLS-------EIGGTQNHLPSITRELQSEGGKMNLLPSHLSIGVLQEIGRRCGSKVEFRS 708

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+++A+ QAAE ALHNLA KYVA+ AP SG +D
Sbjct: 709  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRRDAQQQAAELALHNLAEKYVAYIAPRSGAVD 768

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
             D +  S+ +ENGFL D++ ++  A  KE FP    +E
Sbjct: 769  RDFNNLSLGTENGFLWDVNPASNEA-IKEGFPKDNTSE 805


>ref|XP_012468527.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 2
            isoform X2 [Gossypium raimondii]
            gi|763749646|gb|KJB17085.1| hypothetical protein
            B456_002G264300 [Gossypium raimondii]
            gi|763749649|gb|KJB17088.1| hypothetical protein
            B456_002G264300 [Gossypium raimondii]
          Length = 865

 Score =  872 bits (2252), Expect = 0.0
 Identities = 477/818 (58%), Positives = 576/818 (70%), Gaps = 18/818 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE    P  D  F FPNNEIRI H+SP SERC PLSIL TIS 
Sbjct: 1    MSRLGFKSMVYHGDFFLGELNTIPITDSNFQFPNNEIRIHHISPTSERCIPLSILHTISS 60

Query: 2912 FSIPCKLES----KSPALNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES    + P L  LH+SC  E KTA           VAM +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESPFPVEQPHLIHLHASCFYEFKTAVVLVGDEEVHLVAMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            V  GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  I  E+D +R  GM
Sbjct: 121  VSTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEVLRGWIARESDPIRLSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL D+NI
Sbjct: 181  SAELRRYIDDRLLLKQYAESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQDRNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAW++LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP 
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWDELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPG 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACN RG FFK+FDE++LR++SE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNARGLFFKEFDENVLRKMSEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM E+     NGN   P+ EG++GA+VERR+N+ ++K   +S +  V NNP+LR
Sbjct: 420  PDVSNYLMSEEASFASNGNNGAPICEGMNGAEVERRMNQSEEKHVLDSSTRPVTNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGA-----SPRQVGPT-QPDMN-----LD 1524
             E S  PV   +  V P      +PSQKP +LGA     +P  +G + + D N      D
Sbjct: 480  SETSQPPV---TDIVGPASSVAPLPSQKPSILGAPGLLSNPMMLGASVRRDNNGSEGDYD 536

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L ++    LR+ SS+  PL+ + P Q  +  +   GGW  V+E I+    N RPS
Sbjct: 537  MKRRALGIKQSLDLRNQSSIQPPLLPKFPIQTSSSSVVPQGGWL-VEEDINESHLNDRPS 595

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G T+ESD ++ DK R  +NP   ++  S  +  P   SQ K+EEA  G    +QN++  A
Sbjct: 596  GTTQESDVLKSDKLRGYQNPFPHTAPGSVSTGLPSYASQVKIEEARTGLDTPKQNVLPTA 655

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
              S       E G + N + S   +   E G +    S LSIGVLQEIGRRCGSKVEFRS
Sbjct: 656  HLS-------EIGGTQNHLPSITRELQSEGGKMNLLPSHLSIGVLQEIGRRCGSKVEFRS 708

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+++A+ QAAE ALHNLA KYVA+ AP SG +D
Sbjct: 709  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRRDAQQQAAELALHNLAEKYVAYIAPRSGAVD 768

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
             D +  S+ +ENGFL D++ ++  A  KE FP    +E
Sbjct: 769  RDFNNLSLGTENGFLWDVNPASNEA-IKEGFPKDNTSE 805


>gb|KJB17084.1| hypothetical protein B456_002G264300 [Gossypium raimondii]
          Length = 831

 Score =  872 bits (2252), Expect = 0.0
 Identities = 477/818 (58%), Positives = 576/818 (70%), Gaps = 18/818 (2%)
 Frame = -3

Query: 3092 MSRVGLKSVVFHGESCLGEAEIFPTKDPKFPFPNNEIRITHLSPASERCPPLSILQTISP 2913
            MSR+G KS+V+HG+  LGE    P  D  F FPNNEIRI H+SP SERC PLSIL TIS 
Sbjct: 1    MSRLGFKSMVYHGDFFLGELNTIPITDSNFQFPNNEIRIHHISPTSERCIPLSILHTISS 60

Query: 2912 FSIPCKLES----KSPALNCLHSSCSEELKTAXXXXXXXXXXXVAMQAKQEKLCCFWCCS 2745
            F + CKLES    + P L  LH+SC  E KTA           VAM +KQ+K  CFWC S
Sbjct: 61   FPVRCKLESPFPVEQPHLIHLHASCFYEFKTAVVLVGDEEVHLVAMPSKQKKFPCFWCFS 120

Query: 2744 VPAGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEFLQRKIGCETDVLRAGGM 2565
            V  GLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIE L+  I  E+D +R  GM
Sbjct: 121  VSTGLYNSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEVLRGWIARESDPIRLSGM 180

Query: 2564 KAELKRYMDDRALLKQYSESDQVVDNGKVLKTLPEEVPQVSGNQDAVVFRPIIRLNDKNI 2385
             AEL+RY+DDR LLKQY+ESD VVDNGK+ K   EEVP +S   + VV RP+IRL D+NI
Sbjct: 181  SAELRRYIDDRLLLKQYAESDCVVDNGKMFKVQMEEVPPLSDGHEKVV-RPVIRLQDRNI 239

Query: 2384 VLTRINPEVRDTSVLVRLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE 2205
            VLTRINPE+RDTSVLVRLRPAW++LRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDP 
Sbjct: 240  VLTRINPEIRDTSVLVRLRPAWDELRSYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPG 299

Query: 2204 AHLISSKQLLDRVICVKSGSRKSLPNVFHGVICHPRMAMVIDDRLKVWDDKDQPRVHVVP 2025
            AHLI SKQLLDRV+CVKSGSRKSL NVF    CHP+MAMVIDDR KVW+DKDQPRVHVVP
Sbjct: 300  AHLIGSKQLLDRVVCVKSGSRKSLLNVFRDGKCHPQMAMVIDDRSKVWEDKDQPRVHVVP 359

Query: 2024 AFTPYYAPQAEMATAVPVLCVARNVACNVRGGFFKQFDEHILRRISELYYEDEIVNLPSP 1845
             F PYYAPQAE A AVPVLCVARNVACN RG FFK+FDE++LR++SE++YEDE+VNLP  
Sbjct: 360  PFAPYYAPQAETANAVPVLCVARNVACNARGLFFKEFDENVLRKMSEVFYEDEVVNLPLA 419

Query: 1844 PDVSDYLMLEDT--VPNGNIDLPVPEGVSGADVERRLNRLDQKLGAESGSSFVVNNPDLR 1671
            PDVS+YLM E+     NGN   P+ EG++GA+VERR+N+ ++K   +S +  V NNP+LR
Sbjct: 420  PDVSNYLMSEEASFASNGNNGAPICEGMNGAEVERRMNQSEEKHVLDSSTRPVTNNPELR 479

Query: 1670 PEPSHQPVAISSSAVAPPIPRPTMPSQKPGLLGA-----SPRQVGPT-QPDMN-----LD 1524
             E S  PV   +  V P      +PSQKP +LGA     +P  +G + + D N      D
Sbjct: 480  SETSQPPV---TDIVGPASSVAPLPSQKPSILGAPGLLSNPMMLGASVRRDNNGSEGDYD 536

Query: 1523 MRRKILMLQNGQGLRDHSSV-GPLISRPPAQVLAPPIQSNGGWFGVDEVISGGQFNRRPS 1347
            M+R+ L ++    LR+ SS+  PL+ + P Q  +  +   GGW  V+E I+    N RPS
Sbjct: 537  MKRRALGIKQSLDLRNQSSIQPPLLPKFPIQTSSSSVVPQGGWL-VEEDINESHLNDRPS 595

Query: 1346 GVTRESDFVQPDKFRALRNPHNQSSDASTVSEKPCNISQEKVEEAYLGDGKRRQNLVNPA 1167
            G T+ESD ++ DK R  +NP   ++  S  +  P   SQ K+EEA  G    +QN++  A
Sbjct: 596  GTTQESDVLKSDKLRGYQNPFPHTAPGSVSTGLPSYASQVKIEEARTGLDTPKQNVLPTA 655

Query: 1166 QSSPGVCDSEEDGMSLNRVSSNNGDSHLEAGTVAPQLSTLSIGVLQEIGRRCGSKVEFRS 987
              S       E G + N + S   +   E G +    S LSIGVLQEIGRRCGSKVEFRS
Sbjct: 656  HLS-------EIGGTQNHLPSITRELQSEGGKMNLLPSHLSIGVLQEIGRRCGSKVEFRS 708

Query: 986  VVGSAKDLQFSVEVIFTGEKIGAGMGKTKKEARLQAAENALHNLANKYVAFTAPDSGTID 807
            VV ++KDLQFSVEV+FTGEKIG GMGKT+++A+ QAAE ALHNLA KYVA+ AP SG +D
Sbjct: 709  VVSTSKDLQFSVEVLFTGEKIGVGMGKTRRDAQQQAAELALHNLAEKYVAYIAPRSGAVD 768

Query: 806  SDIDKPSVQSENGFLMDIDSSTGLAECKEAFPNSTNAE 693
             D +  S+ +ENGFL D++ ++  A  KE FP    +E
Sbjct: 769  RDFNNLSLGTENGFLWDVNPASNEA-IKEGFPKDNTSE 805