BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00006597
         (763 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307429.2| basal transcription factor complex subunit-r...   274   4e-71
ref|XP_010999372.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010999369.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010916572.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010916571.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010916569.1| PREDICTED: general transcription factor IIH ...   271   2e-70
ref|XP_010273665.1| PREDICTED: general transcription factor IIH ...   271   3e-70
ref|XP_010273664.1| PREDICTED: general transcription factor IIH ...   271   3e-70
ref|XP_010273663.1| PREDICTED: general transcription factor IIH ...   271   3e-70
ref|XP_012078222.1| PREDICTED: general transcription factor IIH ...   270   5e-70
ref|XP_008802071.1| PREDICTED: general transcription factor IIH ...   270   9e-70
ref|XP_008802068.1| PREDICTED: general transcription factor IIH ...   270   9e-70
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...   268   2e-69
emb|CBI19033.3| unnamed protein product [Vitis vinifera]              268   3e-69
ref|XP_012078217.1| PREDICTED: general transcription factor IIH ...   266   1e-68
ref|XP_007019037.1| Basal transcription factor complex subunit-r...   265   3e-68
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   265   3e-68
ref|XP_010675067.1| PREDICTED: general transcription factor IIH ...   263   8e-68
ref|XP_002532948.1| RNA polymerase II transcription factor B sub...   262   2e-67

>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score =  274 bits (701), Expect = 4e-71
 Identities = 150/251 (59%), Positives = 165/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           M S  SKLY           DTNPFFW                   +HVL F        
Sbjct: 1   MTSVPSKLYSDDVSLVVVLLDTNPFFWT-------PPSSLSFSQFLSHVLAFVNSILLLN 53

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIA+G N+C YIYD            EDG MP ++S ++QKLEEF+IKD++L K
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGS--EDGRMPSLYSNLLQKLEEFMIKDEKLGK 111

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           ++S                LCYIQRVFRSGPLHP PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 112 EQSQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFS 171

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC VGA +SAFLQQASYITGGVY+KPQHLDGLFQYLT VFATDL SRSF+Q
Sbjct: 172 AQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQ 231

Query: 35  LPRPVGVDFRA 3
           LPRP GVDFRA
Sbjct: 232 LPRPAGVDFRA 242


>ref|XP_010999372.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Populus euphratica]
          Length = 295

 Score =  271 bits (694), Expect = 2e-70
 Identities = 148/251 (58%), Positives = 165/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           M S  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLS-------HVLAFVNSILLLN 53

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIA+G N+C YIYD            E+G +P ++S ++QKLEEF+IKD++L K
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGS--ENGRIPSLYSNLLQKLEEFMIKDEKLGK 111

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           ++S                LCYIQRVFRSGPLHP PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 112 EQSQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFS 171

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC VGA +SAFLQQASYITGGVY+KPQHLDGLFQYLT VFATDL SRSF+Q
Sbjct: 172 AQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQ 231

Query: 35  LPRPVGVDFRA 3
           LPRP GVDFRA
Sbjct: 232 LPRPAGVDFRA 242


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Populus euphratica] gi|743911031|ref|XP_010999371.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X2 [Populus euphratica]
          Length = 298

 Score =  271 bits (694), Expect = 2e-70
 Identities = 148/251 (58%), Positives = 165/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           M S  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLS-------HVLAFVNSILLLN 53

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIA+G N+C YIYD            E+G +P ++S ++QKLEEF+IKD++L K
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGS--ENGRIPSLYSNLLQKLEEFMIKDEKLGK 111

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           ++S                LCYIQRVFRSGPLHP PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 112 EQSQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFS 171

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC VGA +SAFLQQASYITGGVY+KPQHLDGLFQYLT VFATDL SRSF+Q
Sbjct: 172 AQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQ 231

Query: 35  LPRPVGVDFRA 3
           LPRP GVDFRA
Sbjct: 232 LPRPAGVDFRA 242


>ref|XP_010999369.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Populus euphratica]
          Length = 411

 Score =  271 bits (694), Expect = 2e-70
 Identities = 148/251 (58%), Positives = 165/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           M S  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLS-------HVLAFVNSILLLN 53

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIA+G N+C YIYD            E+G +P ++S ++QKLEEF+IKD++L K
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGS--ENGRIPSLYSNLLQKLEEFMIKDEKLGK 111

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           ++S                LCYIQRVFRSGPLHP PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 112 EQSQRAIKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFS 171

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC VGA +SAFLQQASYITGGVY+KPQHLDGLFQYLT VFATDL SRSF+Q
Sbjct: 172 AQRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQ 231

Query: 35  LPRPVGVDFRA 3
           LPRP GVDFRA
Sbjct: 232 LPRPAGVDFRA 242


>ref|XP_010916572.1| PREDICTED: general transcription factor IIH subunit 3 isoform X4
           [Elaeis guineensis]
          Length = 286

 Score =  271 bits (694), Expect = 2e-70
 Identities = 150/255 (58%), Positives = 165/255 (64%), Gaps = 4/255 (1%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXN--HVLPFXXXXXX 582
           M S  SKLY           D NPFFWA                     HV+PF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 581 XXXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQL 402
                QVV+IATGVNSCGYIYD              GN+P + S++++K+EEFV KD++L
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGGGS------HGGNVPAVCSEILRKVEEFVAKDRRL 114

Query: 401 SK--DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMN 228
            K  D  V G             LCYIQRVFRSG LHP PRILCL GSPDGPEQYVAVMN
Sbjct: 115 GKGPDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMN 174

Query: 227 AIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSR 48
           AIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQHLDGLFQYL  VFATDLQSR
Sbjct: 175 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQSR 234

Query: 47  SFLQLPRPVGVDFRA 3
           +FLQLP+P GVDFRA
Sbjct: 235 NFLQLPKPAGVDFRA 249


>ref|XP_010916571.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Elaeis guineensis]
          Length = 296

 Score =  271 bits (694), Expect = 2e-70
 Identities = 150/255 (58%), Positives = 165/255 (64%), Gaps = 4/255 (1%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXN--HVLPFXXXXXX 582
           M S  SKLY           D NPFFWA                     HV+PF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 581 XXXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQL 402
                QVV+IATGVNSCGYIYD              GN+P + S++++K+EEFV KD++L
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGGGS------HGGNVPAVCSEILRKVEEFVAKDRRL 114

Query: 401 SK--DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMN 228
            K  D  V G             LCYIQRVFRSG LHP PRILCL GSPDGPEQYVAVMN
Sbjct: 115 GKGPDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMN 174

Query: 227 AIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSR 48
           AIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQHLDGLFQYL  VFATDLQSR
Sbjct: 175 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQSR 234

Query: 47  SFLQLPRPVGVDFRA 3
           +FLQLP+P GVDFRA
Sbjct: 235 NFLQLPKPAGVDFRA 249


>ref|XP_010916569.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Elaeis guineensis]
          Length = 305

 Score =  271 bits (694), Expect = 2e-70
 Identities = 150/255 (58%), Positives = 165/255 (64%), Gaps = 4/255 (1%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXN--HVLPFXXXXXX 582
           M S  SKLY           D NPFFWA                     HV+PF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 581 XXXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQL 402
                QVV+IATGVNSCGYIYD              GN+P + S++++K+EEFV KD++L
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGGGS------HGGNVPAVCSEILRKVEEFVAKDRRL 114

Query: 401 SK--DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMN 228
            K  D  V G             LCYIQRVFRSG LHP PRILCL GSPDGPEQYVAVMN
Sbjct: 115 GKGPDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMN 174

Query: 227 AIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSR 48
           AIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQHLDGLFQYL  VFATDLQSR
Sbjct: 175 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQSR 234

Query: 47  SFLQLPRPVGVDFRA 3
           +FLQLP+P GVDFRA
Sbjct: 235 NFLQLPKPAGVDFRA 249


>ref|XP_010273665.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Nelumbo nucifera]
          Length = 284

 Score =  271 bits (693), Expect = 3e-70
 Identities = 148/251 (58%), Positives = 166/251 (66%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPF W+                   HV  F        
Sbjct: 1   MASITSKLYSDDVSLLVVLLDTNPFLWS---GENTTTNSLSFPKFLTHVFSFLNSILLLN 57

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG+NSC YIYD            E+G MP + SK++Q LEEF+ +DQ+L+K
Sbjct: 58  QLNQVVVIATGLNSCDYIYDSSSSPTTVESL-ENGRMPALCSKLLQNLEEFLARDQELNK 116

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           DES  G             LCYIQ+VFRSGPLHP PRILCL GS DGPEQYVA+MNAIFS
Sbjct: 117 DESPPGIASSLLSGSLSLALCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFS 176

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPID+CV+GAQHSAFLQQASYITGGVY+KP  LDGLFQYL+ VF+TDLQSRSFLQ
Sbjct: 177 AQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQ 236

Query: 35  LPRPVGVDFRA 3
           LP+PVGVDFRA
Sbjct: 237 LPKPVGVDFRA 247


>ref|XP_010273664.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Nelumbo nucifera]
          Length = 298

 Score =  271 bits (693), Expect = 3e-70
 Identities = 148/251 (58%), Positives = 166/251 (66%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPF W+                   HV  F        
Sbjct: 1   MASITSKLYSDDVSLLVVLLDTNPFLWS---GENTTTNSLSFPKFLTHVFSFLNSILLLN 57

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG+NSC YIYD            E+G MP + SK++Q LEEF+ +DQ+L+K
Sbjct: 58  QLNQVVVIATGLNSCDYIYDSSSSPTTVESL-ENGRMPALCSKLLQNLEEFLARDQELNK 116

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           DES  G             LCYIQ+VFRSGPLHP PRILCL GS DGPEQYVA+MNAIFS
Sbjct: 117 DESPPGIASSLLSGSLSLALCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFS 176

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPID+CV+GAQHSAFLQQASYITGGVY+KP  LDGLFQYL+ VF+TDLQSRSFLQ
Sbjct: 177 AQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQ 236

Query: 35  LPRPVGVDFRA 3
           LP+PVGVDFRA
Sbjct: 237 LPKPVGVDFRA 247


>ref|XP_010273663.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Nelumbo nucifera]
          Length = 303

 Score =  271 bits (693), Expect = 3e-70
 Identities = 148/251 (58%), Positives = 166/251 (66%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPF W+                   HV  F        
Sbjct: 1   MASITSKLYSDDVSLLVVLLDTNPFLWS---GENTTTNSLSFPKFLTHVFSFLNSILLLN 57

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG+NSC YIYD            E+G MP + SK++Q LEEF+ +DQ+L+K
Sbjct: 58  QLNQVVVIATGLNSCDYIYDSSSSPTTVESL-ENGRMPALCSKLLQNLEEFLARDQELNK 116

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           DES  G             LCYIQ+VFRSGPLHP PRILCL GS DGPEQYVA+MNAIFS
Sbjct: 117 DESPPGIASSLLSGSLSLALCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFS 176

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPID+CV+GAQHSAFLQQASYITGGVY+KP  LDGLFQYL+ VF+TDLQSRSFLQ
Sbjct: 177 AQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQ 236

Query: 35  LPRPVGVDFRA 3
           LP+PVGVDFRA
Sbjct: 237 LPKPVGVDFRA 247


>ref|XP_012078222.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Jatropha curcas] gi|643723184|gb|KDP32789.1|
           hypothetical protein JCGZ_12081 [Jatropha curcas]
          Length = 296

 Score =  270 bits (691), Expect = 5e-70
 Identities = 149/251 (59%), Positives = 163/251 (64%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MASVPSKLYSDDVSLVMVLLDTNPFFWTTSSLLFSQFLS--------HVLAFLNSILLLN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG NSC Y+YD            EDG MP ++S ++Q LEEF+IKD++L K
Sbjct: 53  QLNQVVVIATGYNSCNYVYDSSLAANQSS---EDGRMPALYSNLLQALEEFMIKDEKLGK 109

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           +ES                LCYIQRVFRSGPL+P PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 110 EESQGKIASSLLSGSLSMALCYIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFS 169

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC VG+ +SAFLQQASYITGGVY+KPQHLDGLFQYL  VFATDL  RSFLQ
Sbjct: 170 AQRSMVPIDSCYVGSHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQ 229

Query: 35  LPRPVGVDFRA 3
           LPRP GVDFRA
Sbjct: 230 LPRPAGVDFRA 240


>ref|XP_008802071.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Phoenix dactylifera] gi|672164394|ref|XP_008802073.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X3 [Phoenix dactylifera]
          Length = 459

 Score =  270 bits (689), Expect = 9e-70
 Identities = 150/258 (58%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXN-----HVLPFXXX 591
           M S  SKLY           DTNPFFWA                        HV+PF   
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 590 XXXXXXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKD 411
                   QVV+IATGVNSCGYIYD              GN+P + S+++++LEEFV KD
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSAGGGS------HGGNVPAVCSEILRRLEEFVAKD 114

Query: 410 QQLSK--DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVA 237
           ++L K  D  VVG             LCYIQRVFRSG LHP PRILCL  SPDGPEQYVA
Sbjct: 115 RRLGKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVA 174

Query: 236 VMNAIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDL 57
           VMNAIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQ LDGLFQYL  VFATDL
Sbjct: 175 VMNAIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDL 234

Query: 56  QSRSFLQLPRPVGVDFRA 3
           QSR+FLQLP+P GVDFRA
Sbjct: 235 QSRNFLQLPKPAGVDFRA 252


>ref|XP_008802068.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Phoenix dactylifera] gi|672164388|ref|XP_008802069.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X1 [Phoenix dactylifera]
          Length = 475

 Score =  270 bits (689), Expect = 9e-70
 Identities = 150/258 (58%), Positives = 165/258 (63%), Gaps = 7/258 (2%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXN-----HVLPFXXX 591
           M S  SKLY           DTNPFFWA                        HV+PF   
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 590 XXXXXXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKD 411
                   QVV+IATGVNSCGYIYD              GN+P + S+++++LEEFV KD
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSAGGGS------HGGNVPAVCSEILRRLEEFVAKD 114

Query: 410 QQLSK--DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVA 237
           ++L K  D  VVG             LCYIQRVFRSG LHP PRILCL  SPDGPEQYVA
Sbjct: 115 RRLGKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVA 174

Query: 236 VMNAIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDL 57
           VMNAIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQ LDGLFQYL  VFATDL
Sbjct: 175 VMNAIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDL 234

Query: 56  QSRSFLQLPRPVGVDFRA 3
           QSR+FLQLP+P GVDFRA
Sbjct: 235 QSRNFLQLPKPAGVDFRA 252


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera]
          Length = 303

 Score =  268 bits (686), Expect = 2e-69
 Identities = 148/252 (58%), Positives = 164/252 (65%)
 Frame = -3

Query: 758 LMASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXX 579
           +MA   SKLY           DTNPFFW+ A                 HVL F       
Sbjct: 6   VMAPVPSKLYSDDVSLLVVLLDTNPFFWSTASLPFSKFLS--------HVLAFLNSILLI 57

Query: 578 XXXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLS 399
               QVVVIATG NSC +I+D            E+G MP + S ++QKLEEFV  D++LS
Sbjct: 58  NQLNQVVVIATGCNSCNFIFDSSSVPANPNL--ENGRMPALCSNLLQKLEEFVTGDEKLS 115

Query: 398 KDESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIF 219
           K+    G             LCYIQRVFR+GPLHP PRILCL GSPDGPEQYVAVMNAIF
Sbjct: 116 KEVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIF 175

Query: 218 SAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFL 39
           SAQRSMVPIDSCV+GAQHSAFLQQASYITGGVY+KPQ LDGLFQYL+ VFATDL SR FL
Sbjct: 176 SAQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFL 235

Query: 38  QLPRPVGVDFRA 3
           QLP+P GVDFRA
Sbjct: 236 QLPKPAGVDFRA 247


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  268 bits (685), Expect = 3e-69
 Identities = 148/251 (58%), Positives = 163/251 (64%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MA   SKLY           DTNPFFW+ A                 HVL F        
Sbjct: 1   MAPVPSKLYSDDVSLLVVLLDTNPFFWSTASLPFSKFLS--------HVLAFLNSILLIN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG NSC +I+D            E+G MP + S ++QKLEEFV  D++LSK
Sbjct: 53  QLNQVVVIATGCNSCNFIFDSSSVPANPNL--ENGRMPALCSNLLQKLEEFVTGDEKLSK 110

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           +    G             LCYIQRVFR+GPLHP PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 111 EVLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFS 170

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSCV+GAQHSAFLQQASYITGGVY+KPQ LDGLFQYL+ VFATDL SR FLQ
Sbjct: 171 AQRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQ 230

Query: 35  LPRPVGVDFRA 3
           LP+P GVDFRA
Sbjct: 231 LPKPAGVDFRA 241


>ref|XP_012078217.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Jatropha curcas] gi|802635559|ref|XP_012078218.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X1 [Jatropha curcas]
           gi|802635562|ref|XP_012078219.1| PREDICTED: general
           transcription factor IIH subunit 3 isoform X1 [Jatropha
           curcas] gi|802635602|ref|XP_012078220.1| PREDICTED:
           general transcription factor IIH subunit 3 isoform X1
           [Jatropha curcas]
          Length = 297

 Score =  266 bits (679), Expect = 1e-68
 Identities = 149/252 (59%), Positives = 163/252 (64%), Gaps = 1/252 (0%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MASVPSKLYSDDVSLVMVLLDTNPFFWTTSSLLFSQFLS--------HVLAFLNSILLLN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG NSC Y+YD            EDG MP ++S ++Q LEEF+IKD++L K
Sbjct: 53  QLNQVVVIATGYNSCNYVYDSSLAANQSS---EDGRMPALYSNLLQALEEFMIKDEKLGK 109

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           +ES                LCYIQRVFRSGPL+P PRILCL GSPDGPEQYVAVMNAIFS
Sbjct: 110 EESQGKIASSLLSGSLSMALCYIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFS 169

Query: 215 AQRSMVPIDSCVVGAQHSAFL-QQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFL 39
           AQRSMVPIDSC VG+ +SAFL QQASYITGGVY+KPQHLDGLFQYL  VFATDL  RSFL
Sbjct: 170 AQRSMVPIDSCYVGSHNSAFLQQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFL 229

Query: 38  QLPRPVGVDFRA 3
           QLPRP GVDFRA
Sbjct: 230 QLPRPAGVDFRA 241


>ref|XP_007019037.1| Basal transcription factor complex subunit-related isoform 2
           [Theobroma cacao] gi|508724365|gb|EOY16262.1| Basal
           transcription factor complex subunit-related isoform 2
           [Theobroma cacao]
          Length = 274

 Score =  265 bits (676), Expect = 3e-68
 Identities = 148/251 (58%), Positives = 164/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPFFW+ +                 HVL F        
Sbjct: 1   MASAPSKLYADDVSLVVVLVDTNPFFWSASSLSFSQFLS--------HVLAFLNAILTLN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG NSC YI+D            E+G MP + S ++QKLEEF+IKD+QLSK
Sbjct: 53  QLNQVVVIATGYNSCNYIFDSSSDLNQSF---ENGRMPVMCSSLLQKLEEFLIKDEQLSK 109

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           +                  LCYIQRVFRSG LHPHPRILCL GSPDGPEQYVA+MNAIFS
Sbjct: 110 EVPEGRIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFS 169

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC +GAQ+SAFLQQASYITGGV+ KPQHLDGLFQYL  +FATDL SRSFL 
Sbjct: 170 AQRSMVPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLH 229

Query: 35  LPRPVGVDFRA 3
           LP+PVGVDFRA
Sbjct: 230 LPKPVGVDFRA 240


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score =  265 bits (676), Expect = 3e-68
 Identities = 148/251 (58%), Positives = 164/251 (65%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPFFW+ +                 HVL F        
Sbjct: 1   MASAPSKLYADDVSLVVVLVDTNPFFWSASSLSFSQFLS--------HVLAFLNAILTLN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIATG NSC YI+D            E+G MP + S ++QKLEEF+IKD+QLSK
Sbjct: 53  QLNQVVVIATGYNSCNYIFDSSSDLNQSF---ENGRMPVMCSSLLQKLEEFLIKDEQLSK 109

Query: 395 DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIFS 216
           +                  LCYIQRVFRSG LHPHPRILCL GSPDGPEQYVA+MNAIFS
Sbjct: 110 EVPEGRIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFS 169

Query: 215 AQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFLQ 36
           AQRSMVPIDSC +GAQ+SAFLQQASYITGGV+ KPQHLDGLFQYL  +FATDL SRSFL 
Sbjct: 170 AQRSMVPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDLHSRSFLH 229

Query: 35  LPRPVGVDFRA 3
           LP+PVGVDFRA
Sbjct: 230 LPKPVGVDFRA 240


>ref|XP_010675067.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Beta vulgaris subsp. vulgaris]
           gi|870868920|gb|KMT19706.1| hypothetical protein
           BVRB_1g007610 [Beta vulgaris subsp. vulgaris]
          Length = 306

 Score =  263 bits (672), Expect = 8e-68
 Identities = 146/255 (57%), Positives = 164/255 (64%), Gaps = 4/255 (1%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MA  ASKLY           DTNP+FW  +                 HVL F        
Sbjct: 1   MAPVASKLYTDDVSLVVLLLDTNPYFWTSSSPSSSLSFSHFLS----HVLSFVNSILLLN 56

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXS----EDGNMPGIFSKVIQKLEEFVIKDQ 408
              QVV+IATG N+CGYI+D           S    ++  MP   S V++ LEEFV KD+
Sbjct: 57  QLNQVVIIATGHNTCGYIFDSSLSSVSSSISSNQSSDNATMPSFCSDVMKNLEEFVTKDE 116

Query: 407 QLSKDESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMN 228
            LS  + V G             LCYIQRVFRSGPLHP PRILCLHGSPDGPEQYVAVMN
Sbjct: 117 SLSSVDVVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAVMN 176

Query: 227 AIFSAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSR 48
           AIFSAQRSMVPIDSCV+G QHSAFLQQASYITGGVY+KPQ L+GLFQYL+ VFATDL SR
Sbjct: 177 AIFSAQRSMVPIDSCVIGGQHSAFLQQASYITGGVYLKPQQLEGLFQYLSTVFATDLHSR 236

Query: 47  SFLQLPRPVGVDFRA 3
           +F+QLP+PVGVDFRA
Sbjct: 237 NFIQLPKPVGVDFRA 251


>ref|XP_002532948.1| RNA polymerase II transcription factor B subunit, putative [Ricinus
           communis] gi|223527277|gb|EEF29432.1| RNA polymerase II
           transcription factor B subunit, putative [Ricinus
           communis]
          Length = 266

 Score =  262 bits (669), Expect = 2e-67
 Identities = 145/252 (57%), Positives = 163/252 (64%), Gaps = 1/252 (0%)
 Frame = -3

Query: 755 MASTASKLYXXXXXXXXXXXDTNPFFWAIAXXXXXXXXXXXXXXXXNHVLPFXXXXXXXX 576
           MAS  SKLY           DTNPFFW  +                 HVL F        
Sbjct: 1   MASVPSKLYSDDVSLVMVLLDTNPFFWTTSSLPFSQFLS--------HVLAFLNSILLLN 52

Query: 575 XXXQVVVIATGVNSCGYIYDXXXXXXXXXXXSEDGNMPGIFSKVIQKLEEFVIKDQQLSK 396
              QVVVIA G NSC YIYD            ++G +P ++S ++QKLE+F+I+D++L K
Sbjct: 53  QLNQVVVIANGYNSCDYIYDSSLVMNHSS---DEGRIPALYSDLLQKLEDFMIRDEKLGK 109

Query: 395 -DESVVGNPXXXXXXXXXXXLCYIQRVFRSGPLHPHPRILCLHGSPDGPEQYVAVMNAIF 219
            +ES                LCYIQR+FRSGPLHP PRILCL GSPDGPEQYVAVMN+IF
Sbjct: 110 GEESKRKIASSLLSGSLSMALCYIQRIFRSGPLHPQPRILCLQGSPDGPEQYVAVMNSIF 169

Query: 218 SAQRSMVPIDSCVVGAQHSAFLQQASYITGGVYIKPQHLDGLFQYLTMVFATDLQSRSFL 39
           SAQRSMVPIDSC VG  +SAFLQQASYITGGVY+KPQHLDGLFQYL  VFATDL SRSFL
Sbjct: 170 SAQRSMVPIDSCYVGGHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHSRSFL 229

Query: 38  QLPRPVGVDFRA 3
           QLPRP GVDFRA
Sbjct: 230 QLPRPAGVDFRA 241