BLASTX nr result
ID: Cinnamomum23_contig00006108
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00006108
(863 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III s... 239 2e-60
ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III s... 233 1e-58
ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III s... 227 9e-57
ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III s... 226 2e-56
emb|CBI36309.3| unnamed protein product [Vitis vinifera] 224 4e-56
ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citr... 224 6e-56
ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III s... 223 1e-55
ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III s... 222 2e-55
ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III s... 221 4e-55
ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phas... 221 5e-55
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 221 6e-55
ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III s... 220 1e-54
ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III s... 220 1e-54
gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [... 219 2e-54
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 219 2e-54
ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III s... 219 2e-54
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 218 3e-54
ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, p... 218 3e-54
ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III s... 218 5e-54
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 217 7e-54
>ref|XP_010927732.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806633|ref|XP_010927733.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806635|ref|XP_010927734.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis] gi|743806637|ref|XP_010927735.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Elaeis
guineensis]
Length = 237
Score = 239 bits (610), Expect = 2e-60
Identities = 120/216 (55%), Positives = 157/216 (72%), Gaps = 2/216 (0%)
Frame = -1
Query: 644 LPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLE 465
LP KR +S P LS T++ +Y LI+SKQ +GI D+K E LQ V K+LK+L+
Sbjct: 7 LPQKRPHPDSKPKLPALSETERILYELIRSKQNIGIWTADMKRETGLQTTVVTKTLKSLQ 66
Query: 464 NQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMI 285
N+ LIK+VV++H+K K +MA+EFEPSKEI+GG WY +G LDIEFIR L+E CLK+IE +
Sbjct: 67 NKNLIKDVVNIHNKARKIYMAMEFEPSKEISGGSWYSDGSLDIEFIRILREQCLKHIERL 126
Query: 284 KVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVC 105
++ T+E +++ I+ S F VE T Q++EIV A+VLD EIEE KS+G GDFS +P GK+C
Sbjct: 127 QIATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEIEELKSTGIGDFSKVPSGKIC 186
Query: 104 YRRSKRR--LSTAALTSIPCGVCPRINECTPDGIIS 3
Y+ K R AL+SIPCGVCPRI ECTPDGIIS
Sbjct: 187 YKSLKGREGPKIGALSSIPCGVCPRIGECTPDGIIS 222
>ref|XP_008813399.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera] gi|672187704|ref|XP_008813400.1| PREDICTED:
DNA-directed RNA polymerase III subunit rpc6 [Phoenix
dactylifera]
Length = 232
Score = 233 bits (594), Expect = 1e-58
Identities = 118/216 (54%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Frame = -1
Query: 644 LPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLE 465
LP KR +S LS T++ +Y LIKSKQ +GI D+K E LQ V K+LK+L+
Sbjct: 2 LPQKRPHPDSKTKLPPLSETERVLYELIKSKQNLGIWTADMKRETGLQTTVVTKTLKSLQ 61
Query: 464 NQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMI 285
N+ LIK+VV++H+K K +MAVEFEPSKEI+GG WY +G LD +FIR L+E CLK+IE +
Sbjct: 62 NKNLIKDVVNIHNKARKIYMAVEFEPSKEISGGSWYSDGSLDTDFIRILREQCLKHIERL 121
Query: 284 KVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVC 105
+V T+E +++ I+ S F VE T Q++EIV A+VLD E+EE KS+G GDFS + GK+C
Sbjct: 122 QVATMEAIYKSIQESRVFKVECTMQQIVEIVNAMVLDKEVEELKSTGIGDFSKVQSGKIC 181
Query: 104 YRRSKRR--LSTAALTSIPCGVCPRINECTPDGIIS 3
YR K R A +SIPCGVCPRI+ECTPDGIIS
Sbjct: 182 YRSLKGREGPKVGAFSSIPCGVCPRISECTPDGIIS 217
>ref|XP_009386152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
gi|695003580|ref|XP_009386160.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc6-like [Musa acuminata
subsp. malaccensis]
Length = 237
Score = 227 bits (578), Expect = 9e-57
Identities = 116/219 (52%), Positives = 152/219 (69%), Gaps = 2/219 (0%)
Frame = -1
Query: 653 PLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLK 474
P P KR + +S L ++ +Y LIKS++ MGI D+K E LQ+ V K+LK
Sbjct: 4 PSMTPQKRAQPDSQSQPPALPENERILYELIKSRKNMGIWTADMKKETGLQNIVVTKALK 63
Query: 473 TLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYI 294
+L+N+ LIK+VV+VH+K K FMAVEFEPSKE++GG WY EG LD EFI L+++CLK+I
Sbjct: 64 SLQNKNLIKDVVNVHNKARKIFMAVEFEPSKEVSGGSWYSEGSLDTEFINILRKMCLKHI 123
Query: 293 EMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLG 114
E +KV TIE +++ I S V T Q+LEIV+AL LD EIEE KS+G G+FS++ G
Sbjct: 124 EELKVATIEDIWKSISASGVLKVACTMQQVLEIVRALALDKEIEELKSTGVGEFSTVQTG 183
Query: 113 KVCYR--RSKRRLSTAALTSIPCGVCPRINECTPDGIIS 3
KVCYR R + L+SIPCGVCPRI+ECTPDG+IS
Sbjct: 184 KVCYRSLRGREAPRVGHLSSIPCGVCPRISECTPDGVIS 222
>ref|XP_006465349.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Citrus sinensis]
Length = 233
Score = 226 bits (576), Expect = 2e-56
Identities = 116/218 (53%), Positives = 155/218 (71%), Gaps = 7/218 (3%)
Frame = -1
Query: 635 KRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELK--LQDGSVKKSLKTLEN 462
KR R SN S L+ ++ +Y++I+SKQ MGI D+K EL+ L D V KS+K+L+N
Sbjct: 3 KRKRPESNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 461 QKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIK 282
+ LIK VV++H K K+ MAVEFEPSKEI+GG WY EG LD EFI+ +K CLK I +K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 281 VTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCY 102
V T+EG+ + I+ S AF V+ T+ Q+ EIV+ALVLDN+I E KS+G G+F++IP+GKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 101 RRSKR-----RLSTAALTSIPCGVCPRINECTPDGIIS 3
+ + T +L SIPCGVCP+IN CTPDG+IS
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICTPDGVIS 220
>emb|CBI36309.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 224 bits (572), Expect = 4e-56
Identities = 118/230 (51%), Positives = 157/230 (68%), Gaps = 6/230 (2%)
Frame = -1
Query: 674 LLGMGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDG 495
+LGM R+ L +KR R ++N +SQ L ++ +Y+LI+SK+ MGI D+K E L D
Sbjct: 88 ILGMSRSQ-GLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDN 146
Query: 494 SVKKSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLK 315
V KSLK L+ +KLIK VV++ K K++MAVEFEPSKE+TGG WY+EG LD E+I+ LK
Sbjct: 147 VVTKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILK 206
Query: 314 ELCLKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGD 135
E C+K + +KV T EG+ E I + E + Q+ EI++ALVLDNEI E +SSG G+
Sbjct: 207 ETCVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGE 266
Query: 134 FSSIPLGKVCYRRSKR------RLSTAALTSIPCGVCPRINECTPDGIIS 3
FSSIP+G VCYR + + A+ SIPCGVCPRI +CTPDGIIS
Sbjct: 267 FSSIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIIS 316
>ref|XP_006427248.1| hypothetical protein CICLE_v10026399mg [Citrus clementina]
gi|557529238|gb|ESR40488.1| hypothetical protein
CICLE_v10026399mg [Citrus clementina]
gi|641825965|gb|KDO45213.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
gi|641825966|gb|KDO45214.1| hypothetical protein
CISIN_1g026766mg [Citrus sinensis]
Length = 233
Score = 224 bits (571), Expect = 6e-56
Identities = 115/218 (52%), Positives = 155/218 (71%), Gaps = 7/218 (3%)
Frame = -1
Query: 635 KRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELK--LQDGSVKKSLKTLEN 462
KR R +SN S L+ ++ +Y++I+SKQ MGI D+K EL+ L D V KS+K+L+N
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSKQDMGIWTRDMKRELRVNLPDNIVTKSIKSLQN 62
Query: 461 QKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIK 282
+ LIK VV++H K K+ MAVEFEPSKEI+GG WY EG LD EFI+ +K CLK I +K
Sbjct: 63 KSLIKEVVNIHSKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKLK 122
Query: 281 VTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCY 102
V T+EG+ + I+ S AF V+ T+ Q+ EIV+ALVLDN+I E KS+G G+F++IP+GKVCY
Sbjct: 123 VATLEGISDSIKRSGAFKVDLTKQQIEEIVRALVLDNQIMEVKSNGSGEFTNIPVGKVCY 182
Query: 101 RRSKR-----RLSTAALTSIPCGVCPRINECTPDGIIS 3
+ + T +L SIPCGVCP+IN C PDG+IS
Sbjct: 183 KNVSKGGGGGEPKTGSLASIPCGVCPQINICKPDGVIS 220
>ref|XP_009404340.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Musa
acuminata subsp. malaccensis]
Length = 237
Score = 223 bits (569), Expect = 1e-55
Identities = 115/223 (51%), Positives = 158/223 (70%), Gaps = 2/223 (0%)
Frame = -1
Query: 665 MGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVK 486
M R P++ P KR + +S L +++ VY LIKS++ MGI I D+K E +Q+ V
Sbjct: 1 MSRPPMT-PQKRRQPDSQTQPPALPESERIVYELIKSRKNMGIWIADIKREAGIQNIIVT 59
Query: 485 KSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELC 306
K+LK+L+++ LIK+VV+VH+K K FMAVEFEPSKE++GG WY +G LD EFI L+ +C
Sbjct: 60 KALKSLQSKNLIKDVVNVHNKSRKTFMAVEFEPSKEVSGGSWYSDGSLDTEFINILRMMC 119
Query: 305 LKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSS 126
LK+IE +++ TIE + + I S VE T Q+LEIV+AL LD EIEE KS+G +FS
Sbjct: 120 LKHIEDLRIATIEDIHKCIAASRIMKVECTMQQVLEIVRALALDKEIEELKSTGVAEFSM 179
Query: 125 IPLGKVCYRRSKRRL--STAALTSIPCGVCPRINECTPDGIIS 3
+ GK+CYRRS+ R S L+SIPCG+CPRI+ECTP+G+IS
Sbjct: 180 VQSGKICYRRSRGRQGPSVGHLSSIPCGMCPRISECTPEGVIS 222
>ref|XP_006475958.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Citrus sinensis]
Length = 252
Score = 222 bits (566), Expect = 2e-55
Identities = 119/233 (51%), Positives = 163/233 (69%), Gaps = 8/233 (3%)
Frame = -1
Query: 677 YLLGMGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKS-KQGMGILIGDLKHELK-- 507
YLLG+ + S KR R +SN S L+ ++ +Y++I+S KQ MGI D+K ELK
Sbjct: 9 YLLGLAKG--SGMSKRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVN 66
Query: 506 LQDGSVKKSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFI 327
L D V KS+K+L+N+ LIK VV++H+K K+ MAVEFEPSKEI+GG WY EG LD EFI
Sbjct: 67 LPDNIVTKSIKSLQNKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFI 126
Query: 326 RFLKELCLKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSS 147
+ +K CLK I +KV T+EG+ + I+ S AF V+ T+ Q+ EIV+A+VLDN+I E KS+
Sbjct: 127 KVVKSQCLKQIIKLKVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSN 186
Query: 146 GQGDFSSIPLGKVCYRRSKR-----RLSTAALTSIPCGVCPRINECTPDGIIS 3
G G+F++IP+GKVCY+ + T + S+PCGVCP+IN CTPDG+IS
Sbjct: 187 GSGEFTNIPVGKVCYKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVIS 239
>ref|XP_003551792.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Glycine max] gi|734354912|gb|KHN13797.1| DNA-directed
RNA polymerase III subunit RPC6 [Glycine soja]
Length = 239
Score = 221 bits (564), Expect = 4e-55
Identities = 114/204 (55%), Positives = 147/204 (72%), Gaps = 7/204 (3%)
Frame = -1
Query: 593 SVTDQE--VYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLENQKLIKNVVDVHHKL 420
S+TD E +YNLI SK+ MGI GD+K E L D VKKSLK L+++ LIK VV++ +K
Sbjct: 23 SLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIKEVVNIQNKG 82
Query: 419 NKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIKVTTIEGLFEYIRGS 240
K++MA EFEPSKEITGG WY +G+LD +FI +K++CLKYI KV T +G+ E+ R S
Sbjct: 83 RKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRKS 142
Query: 239 DAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCYR-----RSKRRLST 75
FNVE T Q+ EI++ LVLD+EI E KS+G GDFSS+P+G++CYR ++
Sbjct: 143 GVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGNRGEQKP 202
Query: 74 AALTSIPCGVCPRINECTPDGIIS 3
A+ SIPCGVCPRIN CTPDGIIS
Sbjct: 203 GAMASIPCGVCPRINFCTPDGIIS 226
>ref|XP_007139345.1| hypothetical protein PHAVU_008G021700g [Phaseolus vulgaris]
gi|561012478|gb|ESW11339.1| hypothetical protein
PHAVU_008G021700g [Phaseolus vulgaris]
Length = 239
Score = 221 bits (563), Expect = 5e-55
Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 5/226 (2%)
Frame = -1
Query: 665 MGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVK 486
M + S +KR R + S ++ ++ +YNLI SK+ MGI GD+K E L D VK
Sbjct: 1 MSQLQESSSLKRKRQDLALVSGSMTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVK 60
Query: 485 KSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELC 306
KSLK L+++ LIK VV++ +K K++MA EFEPSKEITGG WY +G LD +FI +KE+C
Sbjct: 61 KSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGDWYTQGSLDTDFINLVKEVC 120
Query: 305 LKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSS 126
LK I KV T +G+ E+ R S F VE T Q+ EI++ALVLD+EIEE KS+G GDFSS
Sbjct: 121 LKCIFRQKVATHDGVLEWSRKSGVFTVEVTAQQIDEILRALVLDDEIEEVKSTGLGDFSS 180
Query: 125 IPLGKVCYR-----RSKRRLSTAALTSIPCGVCPRINECTPDGIIS 3
+P+G++CYR ++ A+ SIPCGVCPRIN CTPDGIIS
Sbjct: 181 VPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIIS 226
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 221 bits (562), Expect = 6e-55
Identities = 114/220 (51%), Positives = 151/220 (68%), Gaps = 6/220 (2%)
Frame = -1
Query: 644 LPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLE 465
L +KR R ++N +SQ L ++ +Y+LI+SK+ MGI D+K E L D V KSLK L+
Sbjct: 7 LSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQ 66
Query: 464 NQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMI 285
+KLIK VV++ K K++MAVEFEPSKE+TGG WY+EG LD E+I+ LKE C+K + +
Sbjct: 67 VKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVKVLSKL 126
Query: 284 KVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVC 105
KV T EG+ E I + E + Q+ EI++ALVLDNEI E +SSG G+FSSIP+G VC
Sbjct: 127 KVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVC 186
Query: 104 YRRSKR------RLSTAALTSIPCGVCPRINECTPDGIIS 3
YR + + A+ SIPCGVCPRI +CTPDGIIS
Sbjct: 187 YRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIIS 226
>ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Populus euphratica]
Length = 258
Score = 220 bits (560), Expect = 1e-54
Identities = 118/227 (51%), Positives = 154/227 (67%), Gaps = 5/227 (2%)
Frame = -1
Query: 668 GMGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSV 489
GM R +KR R N +Q L+ ++ +Y++I+SKQ +GI D+K E KL D V
Sbjct: 19 GMSRLQGPSSLKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVV 78
Query: 488 KKSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKEL 309
KSLK L+ +KLIK VV++ +K K+FMA EFEPSKEI+GG WYLEG LD EFI LK+L
Sbjct: 79 NKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQL 138
Query: 308 CLKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFS 129
C + IE V T+E + + I AFNV+ T+ Q+ EI++ L+LDN I E KS+G G+F+
Sbjct: 139 CKRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFA 198
Query: 128 SIPLGKVCYRR-SKRRL----STAALTSIPCGVCPRINECTPDGIIS 3
SIP G+VCY+ SK L AL SIPCGVCPRI++CTPDGIIS
Sbjct: 199 SIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIIS 245
>ref|XP_006475959.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Citrus sinensis]
Length = 234
Score = 220 bits (560), Expect = 1e-54
Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 8/219 (3%)
Frame = -1
Query: 635 KRGRTNSNPSSQRLSVTDQEVYNLIKS-KQGMGILIGDLKHELK--LQDGSVKKSLKTLE 465
KR R +SN S L+ ++ +Y++I+S KQ MGI D+K ELK L D V KS+K+L+
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 464 NQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMI 285
N+ LIK VV++H+K K+ MAVEFEPSKEI+GG WY EG LD EFI+ +K CLK I +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKEISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 284 KVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVC 105
KV T+EG+ + I+ S AF V+ T+ Q+ EIV+A+VLDN+I E KS+G G+F++IP+GKVC
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 104 YRRSKR-----RLSTAALTSIPCGVCPRINECTPDGIIS 3
Y+ + T + S+PCGVCP+IN CTPDG+IS
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVIS 221
>gb|KDO80021.1| hypothetical protein CISIN_1g0254932mg, partial [Citrus sinensis]
Length = 234
Score = 219 bits (557), Expect = 2e-54
Identities = 113/219 (51%), Positives = 156/219 (71%), Gaps = 8/219 (3%)
Frame = -1
Query: 635 KRGRTNSNPSSQRLSVTDQEVYNLIKS-KQGMGILIGDLKHELK--LQDGSVKKSLKTLE 465
KR R +SN S L+ ++ +Y++I+S KQ MGI D+K ELK L D V KS+K+L+
Sbjct: 3 KRKRPDSNAPSDSLTDHERLIYDVIRSNKQDMGIWTRDMKRELKVNLPDNIVTKSIKSLQ 62
Query: 464 NQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMI 285
N+ LIK VV++H+K K+ MAVEFEPSK+I+GG WY EG LD EFI+ +K CLK I +
Sbjct: 63 NKSLIKEVVNIHNKGKKHLMAVEFEPSKDISGGAWYSEGSLDTEFIKVVKSQCLKQIIKL 122
Query: 284 KVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVC 105
KV T+EG+ + I+ S AF V+ T+ Q+ EIV+A+VLDN+I E KS+G G+F++IP+GKVC
Sbjct: 123 KVATLEGISDSIKRSGAFKVDLTKQQIEEIVRAVVLDNQIMEVKSNGSGEFTNIPVGKVC 182
Query: 104 YRRSKR-----RLSTAALTSIPCGVCPRINECTPDGIIS 3
Y+ + T + S+PCGVCP+IN CTPDG+IS
Sbjct: 183 YKNVSKGGGGGEPKTGSSASVPCGVCPQINFCTPDGVIS 221
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 219 bits (557), Expect = 2e-54
Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 6/218 (2%)
Frame = -1
Query: 638 VKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLENQ 459
+KR R ++N +SQ L ++ +Y+LI+SK+ MGI D+K E L D V KSLK L+ +
Sbjct: 9 LKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVK 68
Query: 458 KLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIKV 279
KLIK VV++ K K++MAVEFEPSKE+TGG WY+EG LD E+I+ LKE C++ + +KV
Sbjct: 69 KLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKETCVRVLSKLKV 128
Query: 278 TTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCYR 99
T EG+ E I + E + Q+ EI++ALVLDNEI E +SSG G+FSSIP+G VCYR
Sbjct: 129 ATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYR 188
Query: 98 RSKR------RLSTAALTSIPCGVCPRINECTPDGIIS 3
+ + + A+ SIPCGVCPRI +CTPDGIIS
Sbjct: 189 CTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIIS 226
>ref|XP_012073203.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Jatropha
curcas] gi|317106726|dbj|BAJ53222.1| JHL06P13.1
[Jatropha curcas] gi|643729216|gb|KDP37096.1|
hypothetical protein JCGZ_06152 [Jatropha curcas]
Length = 235
Score = 219 bits (557), Expect = 2e-54
Identities = 112/215 (52%), Positives = 147/215 (68%), Gaps = 4/215 (1%)
Frame = -1
Query: 635 KRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLENQK 456
KR + SN S+Q L+ +Q +YN I+SKQ MGI D+K E L D V KSLK L+ +
Sbjct: 8 KRKQPESNSSAQSLTEHEQALYNAIRSKQDMGIWTRDMKRETNLPDTVVNKSLKVLQAKN 67
Query: 455 LIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIKVT 276
LIK VV++ +K KY+MA EFEPSKEITGG WY+EG LD FI LK+ C K IE +KV
Sbjct: 68 LIKEVVNIQNKGRKYYMATEFEPSKEITGGTWYVEGNLDTMFIGVLKDQCKKQIEKLKVA 127
Query: 275 TIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCYRR 96
T+E + ++I + V T+ Q+ EI++ALVLDN++ E KS+G G+F+SIP+GKVCY+
Sbjct: 128 TVEAVTDFINRTGVSTVHLTKQQIEEILKALVLDNKVTEVKSNGMGEFASIPVGKVCYKS 187
Query: 95 SKRRLS----TAALTSIPCGVCPRINECTPDGIIS 3
+ S A+ SIPCGVCPRI CTP+GIIS
Sbjct: 188 IGKGSSGDPKIGAMASIPCGVCPRIKHCTPNGIIS 222
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 218 bits (556), Expect = 3e-54
Identities = 115/228 (50%), Positives = 156/228 (68%), Gaps = 6/228 (2%)
Frame = -1
Query: 668 GMGRTPLSLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSV 489
GM R+ S +KR R ++N +SQ L ++ +Y+LI+SK+ MGI D+K E L D V
Sbjct: 61 GMSRSQGS-SLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 119
Query: 488 KKSLKTLENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKEL 309
KSLK L+ +KLIK VV++ K K++MAVEFEPSKE+TGG WY+EG LD E+I+ LK+
Sbjct: 120 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 179
Query: 308 CLKYIEMIKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFS 129
C++ + +KV T EG+ E I + E + Q+ EI++ALVLDNEI E +SSG G+FS
Sbjct: 180 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 239
Query: 128 SIPLGKVCYRRSKR------RLSTAALTSIPCGVCPRINECTPDGIIS 3
SIP+G VCYR + + + A+ SIPCGVCPRI +CTPDGIIS
Sbjct: 240 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIIS 287
>ref|XP_002509507.1| DNA-directed RNA polymerase III subunit F, putative [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 218 bits (556), Expect = 3e-54
Identities = 116/221 (52%), Positives = 153/221 (69%), Gaps = 6/221 (2%)
Frame = -1
Query: 647 SLPVKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTL 468
S +KR + S+ +Q L+ + +YN+I SKQ MGI D+K E L D V KSLK L
Sbjct: 4 SQALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVL 63
Query: 467 ENQKLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEM 288
+ + LIK VV++ +K K++MA EFEPSKEITGG WY+EG LD EFI+ LKE+C K +
Sbjct: 64 QAKNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLK 123
Query: 287 IKVTTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKV 108
+KV T+EG+ + I+ S FN E T+ Q+ EIV+ALVLDN + E KS+G +FS IP+GKV
Sbjct: 124 LKVATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKV 183
Query: 107 CYRRSKRRLSTA------ALTSIPCGVCPRINECTPDGIIS 3
CY + + STA A+ SIPCGVCPRI++CTPDGIIS
Sbjct: 184 CY-KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIIS 223
>ref|XP_011003009.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X1 [Populus euphratica]
Length = 239
Score = 218 bits (554), Expect = 5e-54
Identities = 115/217 (52%), Positives = 151/217 (69%), Gaps = 5/217 (2%)
Frame = -1
Query: 638 VKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLENQ 459
+KR R N +Q L+ ++ +Y++I+SKQ +GI D+K E KL D V KSLK L+ +
Sbjct: 10 LKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNVVNKSLKALQVK 69
Query: 458 KLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIKV 279
KLIK VV++ +K K+FMA EFEPSKEI+GG WYLEG LD EFI LK+LC + IE V
Sbjct: 70 KLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQLCKRQIERSGV 129
Query: 278 TTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCYR 99
T+E + + I AFNV+ T+ Q+ EI++ L+LDN I E KS+G G+F+SIP G+VCY+
Sbjct: 130 ATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEFASIPFGEVCYK 189
Query: 98 R-SKRRL----STAALTSIPCGVCPRINECTPDGIIS 3
SK L AL SIPCGVCPRI++CTPDGIIS
Sbjct: 190 YVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIIS 226
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 217 bits (553), Expect = 7e-54
Identities = 111/218 (50%), Positives = 151/218 (69%), Gaps = 6/218 (2%)
Frame = -1
Query: 638 VKRGRTNSNPSSQRLSVTDQEVYNLIKSKQGMGILIGDLKHELKLQDGSVKKSLKTLENQ 459
+KR R ++N +SQ L ++ +Y+LI+SK+ MGI D+K E L D V KSLK L+ +
Sbjct: 9 LKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVK 68
Query: 458 KLIKNVVDVHHKLNKYFMAVEFEPSKEITGGCWYLEGKLDIEFIRFLKELCLKYIEMIKV 279
KLIK VV++ K K++MAVEFEPSKE+TGG WY+EG LD E+I+ LK+ C++ + +KV
Sbjct: 69 KLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKV 128
Query: 278 TTIEGLFEYIRGSDAFNVEFTRDQMLEIVQALVLDNEIEEEKSSGQGDFSSIPLGKVCYR 99
T EG+ E I + E + Q+ EI++ALVLDNEI E +SSG G+FSSIP+G VCYR
Sbjct: 129 ATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYR 188
Query: 98 RSKR------RLSTAALTSIPCGVCPRINECTPDGIIS 3
+ + + A+ SIPCGVCPRI +CTPDGIIS
Sbjct: 189 CTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIIS 226