BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00005903
         (2624 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256146.1| PREDICTED: multisubstrate pseudouridine synt...   897   0.0  
ref|XP_010256145.1| PREDICTED: multisubstrate pseudouridine synt...   891   0.0  
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   875   0.0  
emb|CBI34194.3| unnamed protein product [Vitis vinifera]              866   0.0  
ref|XP_007030612.1| Pseudouridine synthase family protein isofor...   864   0.0  
ref|XP_010259121.1| PREDICTED: multisubstrate pseudouridine synt...   863   0.0  
ref|XP_008789997.1| PREDICTED: multisubstrate pseudouridine synt...   854   0.0  
ref|XP_010259120.1| PREDICTED: multisubstrate pseudouridine synt...   853   0.0  
ref|XP_011032429.1| PREDICTED: multisubstrate pseudouridine synt...   853   0.0  
ref|XP_009364526.1| PREDICTED: multisubstrate pseudouridine synt...   852   0.0  
ref|XP_012492855.1| PREDICTED: pseudouridylate synthase 7 homolo...   850   0.0  
ref|XP_012492856.1| PREDICTED: pseudouridylate synthase 7 homolo...   850   0.0  
ref|XP_012089238.1| PREDICTED: multisubstrate pseudouridine synt...   848   0.0  
ref|XP_010938307.1| PREDICTED: pseudouridylate synthase 7 homolo...   847   0.0  
ref|XP_008388664.1| PREDICTED: multisubstrate pseudouridine synt...   846   0.0  
ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Popu...   845   0.0  
ref|XP_007030611.1| Pseudouridine synthase family protein, putat...   844   0.0  
ref|XP_008218239.1| PREDICTED: multisubstrate pseudouridine synt...   843   0.0  
ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synt...   840   0.0  
ref|XP_008370684.1| PREDICTED: multisubstrate pseudouridine synt...   839   0.0  

>ref|XP_010256146.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X2
            [Nelumbo nucifera]
          Length = 696

 Score =  897 bits (2318), Expect = 0.0
 Identities = 479/753 (63%), Positives = 539/753 (71%), Gaps = 3/753 (0%)
 Frame = -3

Query: 2484 MKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEK 2305
            M  L+E+DVGI  YISQLPGFRGVLKQRYSDFIVNEVD DGNVVHLT  D P E +EE++
Sbjct: 1    MTTLEEADVGIYSYISQLPGFRGVLKQRYSDFIVNEVDSDGNVVHLTCLDAPQENVEEKQ 60

Query: 2304 KAQVFDSTANK--SYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDK 2131
              +  + +  K  +Y  EIE FR++AGD+DAESLK F+++I  G ESD+SPIVLSPD DK
Sbjct: 61   MIKEKEDSVQKEKNYTSEIELFRALAGDSDAESLKAFVNQITSGVESDVSPIVLSPDSDK 120

Query: 2130 LHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDS 1951
             HRT VHNFFK  FKFLVTDTLDG D T KCIRVR C                     D 
Sbjct: 121  SHRTAVHNFFKEHFKFLVTDTLDGPDDTSKCIRVRLCSGGQHSNGRNSRKRK------DR 174

Query: 1950 THKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRS 1771
              KPFDSRGSNDWP+ VGKFLRFHL KENKDTQEALGLIGKMLG+QQRSFGFAGTKDKRS
Sbjct: 175  NDKPFDSRGSNDWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQQRSFGFAGTKDKRS 234

Query: 1770 VSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSE 1591
            VSTQRVT+FKQHAKRLAALNDRL GIKVGDFC+           GNRFTITLRGVVADSE
Sbjct: 235  VSTQRVTIFKQHAKRLAALNDRLIGIKVGDFCHVDEELVLGRLLGNRFTITLRGVVADSE 294

Query: 1590 DIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAA 1411
            D IK A D LG+ GFINY+GLQRFGSGSVPTHL+G  LLRGEWK+AVG+ILDPREGER A
Sbjct: 295  DTIKAAVDALGKKGFINYYGLQRFGSGSVPTHLIGATLLRGEWKTAVGMILDPREGEREA 354

Query: 1410 IMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 1231
            I +AREY+KESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS
Sbjct: 355  IWKAREYYKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 414

Query: 1230 YQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSI 1051
            YQSYLWNHAAS R+QK+G D V++GDLVY+KG S     E +N E E DS +   D   +
Sbjct: 415  YQSYLWNHAASMRLQKHGIDHVVIGDLVYNKGGSTGMPTEAVNIEFEVDSCNEAFDSSHL 474

Query: 1050 TELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKK 871
             E++E+ L +E+  +VKAVNAEDL  G YTI DV LPLPGSRVLYPTNDIA+VYH LAKK
Sbjct: 475  NEITESTLPKEQDNNVKAVNAEDLQSGGYTIADVTLPLPGSRVLYPTNDIAQVYHDLAKK 534

Query: 870  DGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSK 691
            D I L E +H+ KEFS+  MTG YR+VFQ+PIDFEWELL+Y D N+PLAETD+DAIAK K
Sbjct: 535  DSINLAECVHNVKEFSITSMTGGYRQVFQKPIDFEWELLQYTDGNVPLAETDLDAIAKKK 594

Query: 690  PV-NVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAF 514
            P  NV EE F +    K  +V    Q+ N ++++     I     E    K + + E   
Sbjct: 595  PAHNVKEEGFTDSSQLKICSVDYEKQSMNSKDEK-----IQTCNSEAENGKEMGLSEG-- 647

Query: 513  ADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALK 334
                                                         S    D Q  Q+ALK
Sbjct: 648  --------------------------------------------DSLHICDAQKPQMALK 663

Query: 333  LSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
            L FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 664  LGFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 696


>ref|XP_010256145.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Nelumbo nucifera]
          Length = 701

 Score =  891 bits (2302), Expect = 0.0
 Identities = 479/758 (63%), Positives = 539/758 (71%), Gaps = 8/758 (1%)
 Frame = -3

Query: 2484 MKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEK 2305
            M  L+E+DVGI  YISQLPGFRGVLKQRYSDFIVNEVD DGNVVHLT  D P E +EE++
Sbjct: 1    MTTLEEADVGIYSYISQLPGFRGVLKQRYSDFIVNEVDSDGNVVHLTCLDAPQENVEEKQ 60

Query: 2304 KAQVFDSTANK--SYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDK 2131
              +  + +  K  +Y  EIE FR++AGD+DAESLK F+++I  G ESD+SPIVLSPD DK
Sbjct: 61   MIKEKEDSVQKEKNYTSEIELFRALAGDSDAESLKAFVNQITSGVESDVSPIVLSPDSDK 120

Query: 2130 LHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDS 1951
             HRT VHNFFK  FKFLVTDTLDG D T KCIRVR C                     D 
Sbjct: 121  SHRTAVHNFFKEHFKFLVTDTLDGPDDTSKCIRVRLCSGGQHSNGRNSRKRK------DR 174

Query: 1950 THKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQ-----QRSFGFAGT 1786
              KPFDSRGSNDWP+ VGKFLRFHL KENKDTQEALGLIGKMLG+Q     QRSFGFAGT
Sbjct: 175  NDKPFDSRGSNDWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQLCFWQQRSFGFAGT 234

Query: 1785 KDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGV 1606
            KDKRSVSTQRVT+FKQHAKRLAALNDRL GIKVGDFC+           GNRFTITLRGV
Sbjct: 235  KDKRSVSTQRVTIFKQHAKRLAALNDRLIGIKVGDFCHVDEELVLGRLLGNRFTITLRGV 294

Query: 1605 VADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPRE 1426
            VADSED IK A D LG+ GFINY+GLQRFGSGSVPTHL+G  LLRGEWK+AVG+ILDPRE
Sbjct: 295  VADSEDTIKAAVDALGKKGFINYYGLQRFGSGSVPTHLIGATLLRGEWKTAVGMILDPRE 354

Query: 1425 GERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM 1246
            GER AI +AREY+KESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM
Sbjct: 355  GEREAIWKAREYYKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM 414

Query: 1245 MYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGI 1066
            MYVHSYQSYLWNHAAS R+QK+G D V++GDLVY+KG S     E +N E E DS +   
Sbjct: 415  MYVHSYQSYLWNHAASMRLQKHGIDHVVIGDLVYNKGGSTGMPTEAVNIEFEVDSCNEAF 474

Query: 1065 DYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYH 886
            D   + E++E+ L +E+  +VKAVNAEDL  G YTI DV LPLPGSRVLYPTNDIA+VYH
Sbjct: 475  DSSHLNEITESTLPKEQDNNVKAVNAEDLQSGGYTIADVTLPLPGSRVLYPTNDIAQVYH 534

Query: 885  VLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDA 706
             LAKKD I L E +H+ KEFS+  MTG YR+VFQ+PIDFEWELL+Y D N+PLAETD+DA
Sbjct: 535  DLAKKDSINLAECVHNVKEFSITSMTGGYRQVFQKPIDFEWELLQYTDGNVPLAETDLDA 594

Query: 705  IAKSKPV-NVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNV 529
            IAK KP  NV EE F +    K  +V    Q+ N ++++     I     E    K + +
Sbjct: 595  IAKKKPAHNVKEEGFTDSSQLKICSVDYEKQSMNSKDEK-----IQTCNSEAENGKEMGL 649

Query: 528  IEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSS 349
             E                                                S    D Q  
Sbjct: 650  SEG----------------------------------------------DSLHICDAQKP 663

Query: 348  QIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
            Q+ALKL FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 664  QMALKLGFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 701


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1 [Vitis
            vinifera]
          Length = 694

 Score =  875 bits (2260), Expect = 0.0
 Identities = 470/749 (62%), Positives = 532/749 (71%)
 Frame = -3

Query: 2484 MKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEK 2305
            MK+L+ESDVGI  YISQLPGFRG+LKQRY DFIVNEVD DGNVVHLTS D PPE +E  K
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME--K 58

Query: 2304 KAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLH 2125
                    +NK YA EIE FRS+ GD+D E LKG +D++A G E  +SPIVLS   DK H
Sbjct: 59   NETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSH 118

Query: 2124 RTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTH 1945
            RT VHNFFK   KFLVTDT+DG D + KCIRVR                       D   
Sbjct: 119  RTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRK------DRRD 172

Query: 1944 KPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVS 1765
            KPFDSRGS++W + VGKFLRFHL KENKDTQEA+GLIGKMLG+Q RSFGFAGTKDKRSVS
Sbjct: 173  KPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVS 232

Query: 1764 TQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDI 1585
            TQRVTVFKQHA RLAALN+RL GIKVGDFC+           GNRFTITLRGVVADSE+ 
Sbjct: 233  TQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEET 292

Query: 1584 IKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIM 1405
            IK +AD LGR GFINYFGLQRFGSGSVPTHL+G ALLRGEW++AV LILDPREGER AI 
Sbjct: 293  IKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGERDAIR 352

Query: 1404 EAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 1225
            +AREY+KES DI+GTLRQ PRHLVAERAILQCLKK PGNYLQALKAIPRTLRMMYVHSYQ
Sbjct: 353  KAREYYKESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQ 412

Query: 1224 SYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITE 1045
            SYLWNHAAS RVQ YG  QV+LGDLVY KG + EK+  V+N+E +DD  S+  D     E
Sbjct: 413  SYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDE 472

Query: 1044 LSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDG 865
            +SET+L EE+   VKA++AEDLL G YTIDDV+LPLPGSR +YPTNDIA+VYH  AKKD 
Sbjct: 473  ISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDA 532

Query: 864  ITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPV 685
            I+LTES HS KEFS+  MTG +RRVFQ+PIDFEWELL Y + NIPLAETD D I KSKP 
Sbjct: 533  ISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPS 592

Query: 684  NVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADG 505
            N+I    +    +K  +   + Q+E+  +                               
Sbjct: 593  NIIGGEDSRNGNEKENSFQCMKQSESFEH------------------------------- 621

Query: 504  NMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSF 325
              N +L+ DN        NE  G+          E  LPQ++    S    +Q ALKLSF
Sbjct: 622  --NVNLSTDN--------NEPNGV---------TEIGLPQVEPQFESGAPEAQRALKLSF 662

Query: 324  TLPASCYATMAIRELLKTSTSVAFHKTLN 238
            TLPASCYATMAIRELLKTSTSVAF KTLN
Sbjct: 663  TLPASCYATMAIRELLKTSTSVAFQKTLN 691


>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  866 bits (2237), Expect = 0.0
 Identities = 466/749 (62%), Positives = 531/749 (70%)
 Frame = -3

Query: 2484 MKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEK 2305
            MK+L+ESDVGI  YISQLPGFRG+LKQRY DFIVNEVD DGNVVHLTS D PPE +E  K
Sbjct: 1    MKHLEESDVGISFYISQLPGFRGILKQRYCDFIVNEVDSDGNVVHLTSLDAPPESME--K 58

Query: 2304 KAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLH 2125
                    +NK YA EIE FRS+ GD+D E LKG +D++A G E  +SPIVLS   DK H
Sbjct: 59   NETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGIEDGVSPIVLSSSSDKSH 118

Query: 2124 RTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTH 1945
            RT VHNFFK   KFLVTDT+DG D + KCIRVR                       D   
Sbjct: 119  RTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNGRNSRKRK------DRRD 172

Query: 1944 KPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVS 1765
            KPFDSRGS++W + VGKFLRFHL KENKDTQEA+GLIGKMLG+Q RSFGFAGTKDKRSVS
Sbjct: 173  KPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFAGTKDKRSVS 232

Query: 1764 TQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDI 1585
            TQRVTVFKQHA RLAALN+RL GIKVGDFC+           GNRFTITLRGVVADSE+ 
Sbjct: 233  TQRVTVFKQHANRLAALNERLIGIKVGDFCHVREGLVLGQLLGNRFTITLRGVVADSEET 292

Query: 1584 IKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIM 1405
            IK +AD LGR GFINYFGLQRFGSGSVPTHL+G ALLRGEW++AV LILDPREG+   ++
Sbjct: 293  IKASADALGRLGFINYFGLQRFGSGSVPTHLIGAALLRGEWETAVSLILDPREGD-ILLL 351

Query: 1404 EAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 1225
            +AREY+KES DI+GTLRQ PRHLVAERAILQCLKK PGNYLQALKAIPRTLRMMYVHSYQ
Sbjct: 352  KAREYYKESDDIEGTLRQFPRHLVAERAILQCLKKYPGNYLQALKAIPRTLRMMYVHSYQ 411

Query: 1224 SYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITE 1045
            SYLWNHAAS RVQ YG  QV+LGDLVY KG + EK+  V+N+E +DD  S+  D     E
Sbjct: 412  SYLWNHAASMRVQNYGTKQVVLGDLVYCKGDNAEKVTRVVNSEFDDDGCSDAFDSSHFDE 471

Query: 1044 LSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDG 865
            +SET+L EE+   VKA++AEDLL G YTIDDV+LPLPGSR +YPTNDIA+VYH  AKKD 
Sbjct: 472  ISETDLPEERNDPVKALDAEDLLTGNYTIDDVVLPLPGSRAIYPTNDIAQVYHDFAKKDA 531

Query: 864  ITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPV 685
            I+LTES HS KEFS+  MTG +RRVFQ+PIDFEWELL Y + NIPLAETD D I KSKP 
Sbjct: 532  ISLTESAHSVKEFSITNMTGGFRRVFQKPIDFEWELLTYTEGNIPLAETDWDKITKSKPS 591

Query: 684  NVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADG 505
            N+I    +    +K  +   + Q+E+  +                               
Sbjct: 592  NIIGGEDSRNGNEKENSFQCMKQSESFEH------------------------------- 620

Query: 504  NMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSF 325
              N +L+ DN        NE  G+          E  LPQ++    S    +Q ALKLSF
Sbjct: 621  --NVNLSTDN--------NEPNGV---------TEIGLPQVEPQFESGAPEAQRALKLSF 661

Query: 324  TLPASCYATMAIRELLKTSTSVAFHKTLN 238
            TLPASCYATMAIRELLKTSTSVAF KTLN
Sbjct: 662  TLPASCYATMAIRELLKTSTSVAFQKTLN 690


>ref|XP_007030612.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719217|gb|EOY11114.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 732

 Score =  864 bits (2233), Expect = 0.0
 Identities = 458/777 (58%), Positives = 550/777 (70%)
 Frame = -3

Query: 2565 CPLKPSTRCSLKPLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGVLKQRYSDFI 2386
            CP    +  +  P+   SN +      M  + ESDVGILC+IS LPGFRG+LKQRYSDFI
Sbjct: 20   CPADSKSNLTKTPVIKSSNSLTL----MTTITESDVGILCFISHLPGFRGILKQRYSDFI 75

Query: 2385 VNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLK 2206
            VNEVD +GNVVHLTS D PPE ++E +         NK YA EI  FRS+AGD DA+ L+
Sbjct: 76   VNEVDTEGNVVHLTSLDAPPEAVQEGETKT--PDQLNKCYASEIIKFRSLAGDTDADRLE 133

Query: 2205 GFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVR 2026
             F+++I  G+E DI PIVLSPD DK HRT +HNFFK   +FLVTDT+DG D++ KCIRVR
Sbjct: 134  AFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVR 193

Query: 2025 FCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEA 1846
                                   +   KP+DSRGS+ WP+ +GKFLRFHL KENKDTQEA
Sbjct: 194  LNSGNNNKGRNSKKRK-------ERGDKPYDSRGSSHWPEHLGKFLRFHLYKENKDTQEA 246

Query: 1845 LGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXX 1666
            LGLIGKMLG+Q RSFGFAGTKDKRSVSTQRVTVFKQHA RLAALN+RL GIKVGDFCY  
Sbjct: 247  LGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLIGIKVGDFCYVK 306

Query: 1665 XXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVG 1486
                     GNRFTI LRG+VADSE+ IK + ++LGR GFINYFGLQRFGSGS+PTH +G
Sbjct: 307  DDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRFGSGSIPTHRIG 366

Query: 1485 TALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCL 1306
              LLRGEW++A   ILDPREGER  + +AREY+KE+GDI+GTLRQLPRHLVAERA+LQCL
Sbjct: 367  ATLLRGEWQAAASTILDPREGERDFVSKAREYYKETGDIEGTLRQLPRHLVAERAMLQCL 426

Query: 1305 KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSH 1126
            KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV+KYG+++V+LGDLVY KG+  
Sbjct: 427  KKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVEKYGSNEVVLGDLVYCKGNDA 486

Query: 1125 EKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVI 946
            EK V+V+ +E ED++  +  D   + E+S T+L E K   VKA+ A D+  G YTI+DV+
Sbjct: 487  EK-VKVVPSEHEDNNFEDAYDCSQLDEISGTDLPEGKNNLVKAITAADISTGNYTIEDVV 545

Query: 945  LPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFE 766
            LP+PGSR++YP NDIA VYH +AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDFE
Sbjct: 546  LPMPGSRIIYPVNDIANVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFE 605

Query: 765  WELLRYRDPNIPLAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQED 586
            WELL Y D +I L+ETD+D IAK+KPVN+++E       +KP        TE  ++  + 
Sbjct: 606  WELLSYTDGSIALSETDLDKIAKTKPVNLVKE-------EKP-----TDGTEG-QDSSDH 652

Query: 585  LPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDE 406
            +  I   ED++            F+ GN+                          E E  
Sbjct: 653  MEHIESFEDDKK-----------FSTGNV--------------------------EVEGS 675

Query: 405  REERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
            RE   PQI S   S+   +Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 676  REAEPPQIHSLPESNSLGTQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 732


>ref|XP_010259121.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X2
            [Nelumbo nucifera]
          Length = 734

 Score =  863 bits (2229), Expect = 0.0
 Identities = 469/786 (59%), Positives = 538/786 (68%), Gaps = 2/786 (0%)
 Frame = -3

Query: 2589 TFPPSAPFCPL-KPSTRCSLKPLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGV 2413
            +FPPS     L KP     LKP   + N  + + L M  L+E+ VGI  YIS LPGF  V
Sbjct: 8    SFPPSITVLALLKPF---KLKPYYYHCNSTKAETLAMTTLNEAGVGIYSYISHLPGFHAV 64

Query: 2412 LKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIA 2233
            LKQRYSDFIVNEVD DG VVHLT  D PPE + E +K +       K+Y  EIE FR++A
Sbjct: 65   LKQRYSDFIVNEVDSDGKVVHLTCLDAPPEIVAEMEKERGIPDQTYKTYTSEIELFRALA 124

Query: 2232 GDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSD 2053
            GD+DAESLK  L++I  G +S++SPIVLSPD DK HRT VH FFK  FKFL+TDT+DG D
Sbjct: 125  GDSDAESLKSLLNQITSGGQSNVSPIVLSPDSDKSHRTAVHKFFKEHFKFLLTDTVDGPD 184

Query: 2052 ATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLC 1873
             TLKCIRVR                       D   KPFDSRGSN+WP+ VGKFLRFHL 
Sbjct: 185  DTLKCIRVRLSSIGQDSNARNSKKRK------DRKDKPFDSRGSNNWPEHVGKFLRFHLY 238

Query: 1872 KENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGI 1693
            KENKDTQE LGL+GKMLG+QQRSFGFAGTKDKRSVSTQRVTVFKQ+AKRLAALNDRL GI
Sbjct: 239  KENKDTQEVLGLLGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQYAKRLAALNDRLIGI 298

Query: 1692 KVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGS 1513
            KVGDFC+           GNRFTITLRGVVADSED IK A D LG+ GFINY+GLQRFGS
Sbjct: 299  KVGDFCHVKEELLLGQLLGNRFTITLRGVVADSEDTIKAAVDALGKKGFINYYGLQRFGS 358

Query: 1512 GSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLV 1333
            GS+P HL+G  LLRGEWK AV +ILDPREGER  I +AREY+K+SGDI+GTLRQLP HLV
Sbjct: 359  GSMPNHLIGATLLRGEWKMAVSMILDPREGEREGIRKAREYYKDSGDIEGTLRQLPHHLV 418

Query: 1332 AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGD 1153
            AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ++G D V++GD
Sbjct: 419  AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASIRVQRHGIDGVVIGD 478

Query: 1152 LVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLR 973
            LVYSK  S     E I++  EDDS ++      + E +E  L +EK   VKAV+AEDL R
Sbjct: 479  LVYSKSGSTGMPTEAISSGFEDDSCNDKFGCSDLDETTEATLPKEKGSIVKAVDAEDLQR 538

Query: 972  GEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRR 793
            G+YTI DVILPLPGSRVLYPT+DIA+VY  LAKKDGI+L ES+HS KEFS+ CMTG YR 
Sbjct: 539  GDYTIADVILPLPGSRVLYPTHDIAQVYRDLAKKDGISLMESVHSTKEFSITCMTGGYRH 598

Query: 792  VFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPV-NVIEETFANGKTDKPLAVHNVAQ 616
            VFQ+PIDF+WEL++Y D N+PL ETD+D IAK+ PV N+ EE   +   DK         
Sbjct: 599  VFQKPIDFDWELIQYIDGNVPLVETDLDVIAKTGPVHNIREEGCTDAGGDKICTTGCAKL 658

Query: 615  TENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEG 436
            + NL+ND        EAEDE+ +             GN  +                   
Sbjct: 659  SVNLKNDTTYTQYDSEAEDEKEVG----------LHGNCGHG------------------ 690

Query: 435  LPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVA 256
                                    D +  Q+ALKL FTLPASCYATMAIRELLKTSTSVA
Sbjct: 691  -----------------------CDAREPQVALKLGFTLPASCYATMAIRELLKTSTSVA 727

Query: 255  FHKTLN 238
            F KT N
Sbjct: 728  FQKTQN 733


>ref|XP_008789997.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Phoenix dactylifera]
          Length = 687

 Score =  854 bits (2206), Expect = 0.0
 Identities = 462/749 (61%), Positives = 530/749 (70%), Gaps = 1/749 (0%)
 Frame = -3

Query: 2481 KNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKK 2302
            K+LDE+DVGI CY+S LPGFRGVLKQRYSDFIVNEVD D  +VHLTSFDLPPE  E +++
Sbjct: 3    KSLDENDVGISCYVSSLPGFRGVLKQRYSDFIVNEVDLDEKIVHLTSFDLPPECTEVKEE 62

Query: 2301 AQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHR 2122
                  T+ K  A E+ESFRS+ GD DAE+LKG L++I  G E DI+PIVLSPD DK HR
Sbjct: 63   EN--PPTSGKDCASEVESFRSLCGDHDAEALKGLLEKILSGVEGDIAPIVLSPDSDKSHR 120

Query: 2121 TEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHK 1942
             EVHNFFK  FKFLVTDT++GS+   KCIRVRFC                  D       
Sbjct: 121  AEVHNFFKKNFKFLVTDTVEGSEGGSKCIRVRFCLVQGGGRSRRGKKRKNMGDSDLKDVM 180

Query: 1941 PFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVST 1762
            PFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG QQRSFGFAGTKDKRSVST
Sbjct: 181  PFDSRGSDNWPENLGKFLRFHLYKENKDTQEALGVIGKMLGFQQRSFGFAGTKDKRSVST 240

Query: 1761 QRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDII 1582
            QRVT+FKQHA+RLAALN RLFGIKVGDFCY           GNRFTITLRGVVADSED I
Sbjct: 241  QRVTIFKQHAERLAALNGRLFGIKVGDFCYVREGLVLGQLFGNRFTITLRGVVADSEDTI 300

Query: 1581 KGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIME 1402
            K AA+ LGR+GFINY+GLQRFGSGSVPTHL+G ALLRGEWK A  LILDPREGER  I E
Sbjct: 301  KEAANGLGRNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKGAANLILDPREGERDIIRE 360

Query: 1401 AREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQS 1222
            AR  +KE GDID  L++LPRHLVAERAILQ LKKCPGNYLQALKAIPRTLRMMYVHSYQS
Sbjct: 361  ARVSYKEHGDIDLILKKLPRHLVAERAILQFLKKCPGNYLQALKAIPRTLRMMYVHSYQS 420

Query: 1221 YLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITEL 1042
            YLWNHAASRRVQKYG  QV+LGDLV+ K SS  ++  V ++EPEDD S     Y  + + 
Sbjct: 421  YLWNHAASRRVQKYGISQVVLGDLVFCKESSAREVAAVDSSEPEDDCSD---PYNCLPDT 477

Query: 1041 SETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGI 862
            SE  + EEKV+SVK V++EDLL+  YT +DV+LPLPGSR+LYP NDIA+VYH +AKKDGI
Sbjct: 478  SEEAVPEEKVQSVKTVDSEDLLKAIYTFEDVVLPLPGSRILYPANDIADVYHDMAKKDGI 537

Query: 861  TLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPVN 682
            +LTES+HSAKEFS+  M G YR+VFQRPID+ W LL Y D  +PLAETD+D I K KP +
Sbjct: 538  SLTESVHSAKEFSITNMRGGYRQVFQRPIDYVWGLLSYTDDTVPLAETDLDIIHKRKPAD 597

Query: 681  VIEETF-ANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADG 505
            +IEE   ANG               NL +   D       E + S+S  V          
Sbjct: 598  LIEEELHANG---------------NLGSQSNDF------ESQGSVSNHV---------- 626

Query: 504  NMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSF 325
                                         A+D  E    Q++S  +SD Q S++ALKL F
Sbjct: 627  -----------------------------AQDGSEGGSLQVESICSSDAQPSKLALKLGF 657

Query: 324  TLPASCYATMAIRELLKTSTSVAFHKTLN 238
             LPAS YATMAIRELLK STSVA  KT+N
Sbjct: 658  ALPASSYATMAIRELLKMSTSVAHQKTMN 686


>ref|XP_010259120.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Nelumbo nucifera]
          Length = 737

 Score =  853 bits (2205), Expect = 0.0
 Identities = 464/779 (59%), Positives = 533/779 (68%), Gaps = 2/779 (0%)
 Frame = -3

Query: 2589 TFPPSAPFCPL-KPSTRCSLKPLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGV 2413
            +FPPS     L KP     LKP   + N  + + L M  L+E+ VGI  YIS LPGF  V
Sbjct: 8    SFPPSITVLALLKPF---KLKPYYYHCNSTKAETLAMTTLNEAGVGIYSYISHLPGFHAV 64

Query: 2412 LKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIA 2233
            LKQRYSDFIVNEVD DG VVHLT  D PPE + E +K +       K+Y  EIE FR++A
Sbjct: 65   LKQRYSDFIVNEVDSDGKVVHLTCLDAPPEIVAEMEKERGIPDQTYKTYTSEIELFRALA 124

Query: 2232 GDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSD 2053
            GD+DAESLK  L++I  G +S++SPIVLSPD DK HRT VH FFK  FKFL+TDT+DG D
Sbjct: 125  GDSDAESLKSLLNQITSGGQSNVSPIVLSPDSDKSHRTAVHKFFKEHFKFLLTDTVDGPD 184

Query: 2052 ATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLC 1873
             TLKCIRVR                       D   KPFDSRGSN+WP+ VGKFLRFHL 
Sbjct: 185  DTLKCIRVRLSSIGQDSNARNSKKRK------DRKDKPFDSRGSNNWPEHVGKFLRFHLY 238

Query: 1872 KENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGI 1693
            KENKDTQE LGL+GKMLG+QQRSFGFAGTKDKRSVSTQRVTVFKQ+AKRLAALNDRL GI
Sbjct: 239  KENKDTQEVLGLLGKMLGIQQRSFGFAGTKDKRSVSTQRVTVFKQYAKRLAALNDRLIGI 298

Query: 1692 KVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGS 1513
            KVGDFC+           GNRFTITLRGVVADSED IK A D LG+ GFINY+GLQRFGS
Sbjct: 299  KVGDFCHVKEELLLGQLLGNRFTITLRGVVADSEDTIKAAVDALGKKGFINYYGLQRFGS 358

Query: 1512 GSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLV 1333
            GS+P HL+G  LLRGEWK AV +ILDPREGER  I +AREY+K+SGDI+GTLRQLP HLV
Sbjct: 359  GSMPNHLIGATLLRGEWKMAVSMILDPREGEREGIRKAREYYKDSGDIEGTLRQLPHHLV 418

Query: 1332 AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGD 1153
            AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQ++G D V++GD
Sbjct: 419  AERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASIRVQRHGIDGVVIGD 478

Query: 1152 LVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLR 973
            LVYSK  S     E I++  EDDS ++      + E +E  L +EK   VKAV+AEDL R
Sbjct: 479  LVYSKSGSTGMPTEAISSGFEDDSCNDKFGCSDLDETTEATLPKEKGSIVKAVDAEDLQR 538

Query: 972  GEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRR 793
            G+YTI DVILPLPGSRVLYPT+DIA+VY  LAKKDGI+L ES+HS KEFS+ CMTG YR 
Sbjct: 539  GDYTIADVILPLPGSRVLYPTHDIAQVYRDLAKKDGISLMESVHSTKEFSITCMTGGYRH 598

Query: 792  VFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPV-NVIEETFANGKTDKPLAVHNVAQ 616
            VFQ+PIDF+WEL++Y D N+PL ETD+D IAK+ PV N+ EE   +   DK         
Sbjct: 599  VFQKPIDFDWELIQYIDGNVPLVETDLDVIAKTGPVHNIREEGCTDAGGDKICTTGCAKL 658

Query: 615  TENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEG 436
            + NL+ND        EAEDE+ +             GN  +                   
Sbjct: 659  SVNLKNDTTYTQYDSEAEDEKEVG----------LHGNCGHG------------------ 690

Query: 435  LPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSV 259
                                    D +  Q+ALKL FTLPASCYATMAIRELLKTSTSV
Sbjct: 691  -----------------------CDAREPQVALKLGFTLPASCYATMAIRELLKTSTSV 726


>ref|XP_011032429.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1
            [Populus euphratica]
          Length = 699

 Score =  853 bits (2203), Expect = 0.0
 Identities = 457/757 (60%), Positives = 539/757 (71%), Gaps = 6/757 (0%)
 Frame = -3

Query: 2487 TMKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEE 2308
            T K ++ESDVGILCYISQLPGFRG+LKQRY+DFIVNEVD DGNVVHLT  + PP+ +EE 
Sbjct: 3    TSKAMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEET 62

Query: 2307 KK--AQVFDS--TANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESD--ISPIVLS 2146
            K+  A+V D   +  KS+  E+E FRS+AGD+DAE L+  + ++    ES+  +  IVLS
Sbjct: 63   KECEAKVSDEKMSERKSHEAEMELFRSLAGDSDAEKLESLISQVDSRTESEDSVPHIVLS 122

Query: 2145 PDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXX 1966
            PD DK HRT VHNFFK  FKFLVTDT DG DA+ KCIRVR                    
Sbjct: 123  PDSDKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRK--- 179

Query: 1965 DCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGT 1786
               +   KPFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG+Q +SFGFAGT
Sbjct: 180  ---ERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGT 236

Query: 1785 KDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGV 1606
            KDKR+VSTQRVTVFKQ A RLAALNDRL GIKVGDFC+           GNRFT+TLRGV
Sbjct: 237  KDKRAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGKLLGNRFTVTLRGV 296

Query: 1605 VADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPRE 1426
            +ADSED IK AAD+LGR GFINYFGLQRFG+GSVPTHL+G ALLRGEWK+AV +ILDPRE
Sbjct: 297  IADSEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPRE 356

Query: 1425 GERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRM 1246
            GER  I +AREY+KES DI+GTLRQLPRHLVAERA+LQCLKKCPG+YLQA+KAIPRTLRM
Sbjct: 357  GERDVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTLRM 416

Query: 1245 MYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGI 1066
            MYVH YQSYLWNHAAS R+QKYG DQV+LGDLVY KG  +EK    +N+E  DD+  +  
Sbjct: 417  MYVHGYQSYLWNHAASERLQKYGFDQVVLGDLVYCKGDDNEKETVGVNSESNDDNCDDTY 476

Query: 1065 DYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYH 886
            D   + E S T+L E K   VK V  ED+  G YT+DDVILP+PGSRV++PTN+IA VYH
Sbjct: 477  DCSHLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVILPMPGSRVIFPTNEIATVYH 536

Query: 885  VLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDA 706
             LAKKD I LTES+H  KEFS+  MTGSYRRVFQ+P+DFEWELL Y D N PLAETD+D 
Sbjct: 537  DLAKKDAINLTESVHHVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDK 596

Query: 705  IAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVI 526
            I+K+   N+I++    GK D+          +N  +D  +LP                  
Sbjct: 597  ISKTGSTNIIKQE-EQGKGDE----------DNDLSDCTELPVC---------------- 629

Query: 525  EEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQ 346
                      NS+A+ +V   E+                ERE    Q+   S S+ Q +Q
Sbjct: 630  --------SRNSIALSSVTNEES----------------EREVESEQV---SGSNWQETQ 662

Query: 345  IALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
            +ALKLS TLPASCYATMAIRELLKTSTSVA+HKTLNQ
Sbjct: 663  MALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLNQ 699


>ref|XP_009364526.1| PREDICTED: multisubstrate pseudouridine synthase 7 [Pyrus x
            bretschneideri]
          Length = 715

 Score =  852 bits (2201), Expect = 0.0
 Identities = 456/782 (58%), Positives = 545/782 (69%), Gaps = 8/782 (1%)
 Frame = -3

Query: 2559 LKPSTRC--SLKPLCNYSNPVQFQNLTMKNL------DESDVGILCYISQLPGFRGVLKQ 2404
            LKP+  C   LKP C+ + P       +K L      +ESDVGI+CYISQLPGFRG+LKQ
Sbjct: 3    LKPAPSCFPMLKPYCSATPPPPPLTTALKALMATKTTEESDVGIVCYISQLPGFRGILKQ 62

Query: 2403 RYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDA 2224
            RYSDF+VNEVD +GNVVHLT+ D P E ++E   A       +K Y  EIESFR++A   
Sbjct: 63   RYSDFMVNEVDKEGNVVHLTNLDAPVEAVQES--ATTTGDGTSKDYTTEIESFRALADRN 120

Query: 2223 DAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATL 2044
            DAE L+ F+ +I  G E  + PIVLSPD DK HRT VHNFFK  FKFLVTDT+DG D++ 
Sbjct: 121  DAERLETFIKQINSGGEDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDSSS 180

Query: 2043 KCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKEN 1864
            KCIRVR                       +   KPFDSRGS DW + VGKFLRFHL KEN
Sbjct: 181  KCIRVRINSGGQNSRGRNSRKRK------ERGDKPFDSRGSEDWSEHVGKFLRFHLYKEN 234

Query: 1863 KDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVG 1684
            KDTQEALG+IGKMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKVG
Sbjct: 235  KDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKVG 294

Query: 1683 DFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSV 1504
            DFCY           GNRFTITLRGVVADSED IK +A  LGR GFINYFGLQRFGSGSV
Sbjct: 295  DFCYVTEGLVLGQLLGNRFTITLRGVVADSEDTIKASASALGRQGFINYFGLQRFGSGSV 354

Query: 1503 PTHLVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAER 1324
            PTHL+G +LLRGEWKS V + LDPREGE+  I EAREY+KE+ DI+GTLR+LPRHLV+ER
Sbjct: 355  PTHLIGASLLRGEWKSTVSMFLDPREGEKNMITEAREYYKETNDIEGTLRKLPRHLVSER 414

Query: 1323 AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVY 1144
            AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RV+KYG DQV+LGDLVY
Sbjct: 415  AILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDQVVLGDLVY 474

Query: 1143 SKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEY 964
             KG+  EK  EV+++E  D++  + +D   + +++ET L EEK+  VKAV AED+  G Y
Sbjct: 475  CKGNETEKATEVVSSECVDENGDDTLDPNDLGDIAETNLPEEKLSLVKAVTAEDIQSGNY 534

Query: 963  TIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQ 784
            TI DV+LP+PGSRV++P NDIA+V+H LAKKD I LTES+H+ KEFS+  +TG+YRR+FQ
Sbjct: 535  TIADVVLPMPGSRVIFPENDIADVFHNLAKKDEINLTESVHNVKEFSITSVTGNYRRIFQ 594

Query: 783  RPIDFEWELLRYRDPNIPLAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENL 604
            +P+DFEWE+L+Y D NIPL +TD+D IAK+KP +V                         
Sbjct: 595  KPMDFEWEILKYSDGNIPLVDTDLDKIAKTKPASV------------------------- 629

Query: 603  RNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDT 424
              D+ED   ++  E  R                        DN  Q E + N+       
Sbjct: 630  --DKEDPASLNGDEGLR------------------------DNAKQTECVDNDIR----- 658

Query: 423  YEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKT 244
                 ++ E+LP+  S   ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHKT
Sbjct: 659  -----DKGEKLPEFGSLCDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHKT 713

Query: 243  LN 238
            LN
Sbjct: 714  LN 715


>ref|XP_012492855.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Gossypium
            raimondii]
          Length = 733

 Score =  850 bits (2197), Expect = 0.0
 Identities = 451/765 (58%), Positives = 534/765 (69%)
 Frame = -3

Query: 2529 PLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVH 2350
            P+  YSN   + +LTM  + ESDVGILC+IS LPGFRG+LKQRYSDFIVNEVD +GNVVH
Sbjct: 33   PITKYSN---YSSLTMTTITESDVGILCFISNLPGFRGILKQRYSDFIVNEVDTEGNVVH 89

Query: 2349 LTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAES 2170
            LTS D PPE  +E +         NK+YA EIE FRS+A + D + L+ F+++I  G+E 
Sbjct: 90   LTSLDAPPEAFQEGETK--ISDQLNKNYASEIEKFRSLACEIDVDQLEAFINQITSGSEE 147

Query: 2169 DISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXX 1990
            DISPIVLSPD DK HRT +HNFFK   +FLVTDT+DG D++ KCIRVR            
Sbjct: 148  DISPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNKNKGRNS 207

Query: 1989 XXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQ 1810
                           +P+DSRGS+ WP  +G FLRFHL KENKDTQEALGLIGKMLG+Q 
Sbjct: 208  NKRKRGD--------RPYDSRGSSHWPAHLGNFLRFHLFKENKDTQEALGLIGKMLGIQP 259

Query: 1809 RSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNR 1630
            RSFGFAGTKDKRSVSTQRVTVFKQ+A RLAALNDRL GIKVGDFCY           GNR
Sbjct: 260  RSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKVGDFCYVKDDLLLGQLLGNR 319

Query: 1629 FTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAV 1450
            FTI LRGVVADSED I+ +A++LGR GFINYFGLQRFGSGS+PTH +G  LLRGEWK+A 
Sbjct: 320  FTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAA 379

Query: 1449 GLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALK 1270
              ILDPREGER  I +AREY+K++GDIDGTL+QLPRHLVAERA+LQCLKK PGNYLQALK
Sbjct: 380  STILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAERAMLQCLKKSPGNYLQALK 439

Query: 1269 AIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPE 1090
            AIPRTLRMMYVHSYQSYLWNHAAS RVQKYG+ +V+LGDLVYSKG   EK  EV+  E E
Sbjct: 440  AIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSKGDDAEK-TEVVPPEHE 498

Query: 1089 DDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPT 910
            D+S  +  D G + E+S  +L  EK   VK + A D+  G Y I+DV+LP+PGSR++YP 
Sbjct: 499  DNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNYNIEDVVLPMPGSRIIYPM 558

Query: 909  NDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIP 730
            N++A+VYH +AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDF W+LL Y D N+ 
Sbjct: 559  NEVADVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFRWDLLSYTDGNLA 618

Query: 729  LAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERS 550
            L+ETD+D IAK+KPVN ++E      T+     +++ Q E+              EDE+ 
Sbjct: 619  LSETDIDKIAKTKPVNPVKEENPTNGTEGEEPFNHLEQLESF-------------EDEKK 665

Query: 549  ISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFS 370
             S   N                                     E E  RE   PQ+ S  
Sbjct: 666  FSTDDN-------------------------------------EVEVSREAEHPQVHSPP 688

Query: 369  TSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
              +    Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 689  DLNSLEPQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 733


>ref|XP_012492856.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Gossypium
            raimondii] gi|763777866|gb|KJB44989.1| hypothetical
            protein B456_007G284000 [Gossypium raimondii]
          Length = 730

 Score =  850 bits (2196), Expect = 0.0
 Identities = 452/765 (59%), Positives = 536/765 (70%)
 Frame = -3

Query: 2529 PLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVH 2350
            P+  YSN   + +LTM  + ESDVGILC+IS LPGFRG+LKQRYSDFIVNEVD +GNVVH
Sbjct: 33   PITKYSN---YSSLTMTTITESDVGILCFISNLPGFRGILKQRYSDFIVNEVDTEGNVVH 89

Query: 2349 LTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAES 2170
            LTS D PPE+ E +   Q+     NK+YA EIE FRS+A + D + L+ F+++I  G+E 
Sbjct: 90   LTSLDAPPEEGETKISDQL-----NKNYASEIEKFRSLACEIDVDQLEAFINQITSGSEE 144

Query: 2169 DISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXX 1990
            DISPIVLSPD DK HRT +HNFFK   +FLVTDT+DG D++ KCIRVR            
Sbjct: 145  DISPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDGPDSSSKCIRVRLNSGNKNKGRNS 204

Query: 1989 XXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQ 1810
                           +P+DSRGS+ WP  +G FLRFHL KENKDTQEALGLIGKMLG+Q 
Sbjct: 205  NKRKRGD--------RPYDSRGSSHWPAHLGNFLRFHLFKENKDTQEALGLIGKMLGIQP 256

Query: 1809 RSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNR 1630
            RSFGFAGTKDKRSVSTQRVTVFKQ+A RLAALNDRL GIKVGDFCY           GNR
Sbjct: 257  RSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKVGDFCYVKDDLLLGQLLGNR 316

Query: 1629 FTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAV 1450
            FTI LRGVVADSED I+ +A++LGR GFINYFGLQRFGSGS+PTH +G  LLRGEWK+A 
Sbjct: 317  FTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGSIPTHHIGATLLRGEWKAAA 376

Query: 1449 GLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALK 1270
              ILDPREGER  I +AREY+K++GDIDGTL+QLPRHLVAERA+LQCLKK PGNYLQALK
Sbjct: 377  STILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAERAMLQCLKKSPGNYLQALK 436

Query: 1269 AIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPE 1090
            AIPRTLRMMYVHSYQSYLWNHAAS RVQKYG+ +V+LGDLVYSKG   EK  EV+  E E
Sbjct: 437  AIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSKGDDAEK-TEVVPPEHE 495

Query: 1089 DDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPT 910
            D+S  +  D G + E+S  +L  EK   VK + A D+  G Y I+DV+LP+PGSR++YP 
Sbjct: 496  DNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNYNIEDVVLPMPGSRIIYPM 555

Query: 909  NDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIP 730
            N++A+VYH +AKKDGI+LTES+H+ KEFS+  MTGSYRRVFQ+PIDF W+LL Y D N+ 
Sbjct: 556  NEVADVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPIDFRWDLLSYTDGNLA 615

Query: 729  LAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERS 550
            L+ETD+D IAK+KPVN ++E      T+     +++ Q E+              EDE+ 
Sbjct: 616  LSETDIDKIAKTKPVNPVKEENPTNGTEGEEPFNHLEQLESF-------------EDEKK 662

Query: 549  ISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFS 370
             S   N                                     E E  RE   PQ+ S  
Sbjct: 663  FSTDDN-------------------------------------EVEVSREAEHPQVHSPP 685

Query: 369  TSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
              +    Q ALKL+FTLPASCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 686  DLNSLEPQKALKLAFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 730


>ref|XP_012089238.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X2
            [Jatropha curcas]
          Length = 700

 Score =  848 bits (2191), Expect = 0.0
 Identities = 449/749 (59%), Positives = 528/749 (70%), Gaps = 3/749 (0%)
 Frame = -3

Query: 2475 LDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEE-KKA 2299
            ++E DVGILCYISQLPGFRG+LKQRYSDFIVNEVD DGNVVHLTS ++PP+ +E    +A
Sbjct: 8    IEERDVGILCYISQLPGFRGILKQRYSDFIVNEVDTDGNVVHLTSLEVPPQIVEAVGDRA 67

Query: 2298 QVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAE--SDISPIVLSPDPDKLH 2125
                +  +K Y  EIESFR +A + D + L+ F+ +I   +E  S ISPI+LSPD DK H
Sbjct: 68   NKVSNELDKDYKSEIESFRLLASEPDTQCLEAFIAQITSASEDRSSISPILLSPDSDKAH 127

Query: 2124 RTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTH 1945
            RT +HNFFK KFKFLVTDT+DG DA+ KCIR+R                       +   
Sbjct: 128  RTAMHNFFKEKFKFLVTDTVDGPDASSKCIRIRLNSGGHKNGGRNSKKRK------ERGD 181

Query: 1944 KPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVS 1765
            KPFDSRGS+DWP+ +GKFLRFHL KENKDTQEA+ LIGKMLG+Q RSFGFAGTKDKR++S
Sbjct: 182  KPFDSRGSDDWPEHLGKFLRFHLYKENKDTQEAMSLIGKMLGLQPRSFGFAGTKDKRAIS 241

Query: 1764 TQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDI 1585
            TQRVTVFKQHA RLAALNDRL GIKVGDFC+           GNRFT+TLRGVVADSED 
Sbjct: 242  TQRVTVFKQHASRLAALNDRLIGIKVGDFCHVKEGLLLGQLLGNRFTVTLRGVVADSEDT 301

Query: 1584 IKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIM 1405
            IK +AD+LGR+GFINYFGLQRFGSGSVPTHL+G AL RGEWK+ V +ILDPREGER A+ 
Sbjct: 302  IKRSADSLGRNGFINYFGLQRFGSGSVPTHLIGAALFRGEWKNVVSMILDPREGERDAVR 361

Query: 1404 EAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQ 1225
            +AREY+KE+GDI+GTLRQLPR+L+AERAILQCLKKCPGNY QALK+IPRTLRMMYVHSYQ
Sbjct: 362  KAREYYKETGDIEGTLRQLPRYLIAERAILQCLKKCPGNYSQALKSIPRTLRMMYVHSYQ 421

Query: 1224 SYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITE 1045
            SYLWNHAAS RVQKYG DQV++GDLVY K +  EK     N+E ED S  +  D  ++ E
Sbjct: 422  SYLWNHAASMRVQKYGTDQVVVGDLVYCKENDTEKDAADFNSECEDGSCGDIYDCSNLDE 481

Query: 1044 LSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDG 865
             + T+  E K   VKAV AED+  G Y +DDVILP+PGSRV YPTNDIAE YH LAKKD 
Sbjct: 482  TTGTDCPERKNALVKAVTAEDISTGNYNVDDVILPMPGSRVCYPTNDIAEAYHDLAKKDA 541

Query: 864  ITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPV 685
            I L ES+H+ KEFS+  MTGSYRRVFQ+P+DFEWEL+ Y D N PLAETD++ +AK K  
Sbjct: 542  INLAESVHNVKEFSITSMTGSYRRVFQKPMDFEWELVSYTDCNTPLAETDLEKVAKRKTH 601

Query: 684  NVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADG 505
             +I+E     + +          T +  ND+      HE  D+                 
Sbjct: 602  TLIKEEERVNRDEGKSLSDGTELTASFENDE------HERVDK----------------- 638

Query: 504  NMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSF 325
                                        EAE + EE LPQ +S + S+   +Q ALKLSF
Sbjct: 639  ----------------------------EAESDGEEGLPQAESPTGSNSHGAQTALKLSF 670

Query: 324  TLPASCYATMAIRELLKTSTSVAFHKTLN 238
            TLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 671  TLPASCYATMAIRELLKTSTSVAFHKTLN 699


>ref|XP_010938307.1| PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Elaeis
            guineensis] gi|743760689|ref|XP_010938316.1| PREDICTED:
            pseudouridylate synthase 7 homolog isoform X1 [Elaeis
            guineensis]
          Length = 717

 Score =  847 bits (2187), Expect = 0.0
 Identities = 465/791 (58%), Positives = 545/791 (68%), Gaps = 4/791 (0%)
 Frame = -3

Query: 2598 TVLTFPPSAPFCPLKPSTRCSLKPLCNYSNPVQFQNLTM-KNLDESDVGILCYISQLPGF 2422
            + L  PP  P      S   SLKP      P   + L M K+LDE DVGI CY+S +PGF
Sbjct: 4    SALLSPP--PALAALSSLFLSLKP---QRPPKPSETLAMAKSLDEPDVGISCYVSSVPGF 58

Query: 2421 RGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPE--KIEEEKKAQVFDSTANKSYADEIES 2248
            RGVLKQRYSDFIVNEVD D  +VHL+SFDLPPE  +++EE+   +    + K Y   +ES
Sbjct: 59   RGVLKQRYSDFIVNEVDLDEKIVHLSSFDLPPECTEVKEEENPPM----SGKDYFSTVES 114

Query: 2247 FRSIAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDT 2068
            FRS+ GD DAE+LKG L++I+  AE DI+P+VLSPD +K HR EVHNFFK  FKF VTDT
Sbjct: 115  FRSLCGDHDAEALKGLLEKISSSAEGDIAPVVLSPDSEKSHRAEVHNFFKKNFKFFVTDT 174

Query: 2067 LDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFL 1888
            ++GS+   KC+RVRFC                          PFDSRGS++WP+ +GKFL
Sbjct: 175  VEGSEGASKCVRVRFCSVQGGGGSRRGKKRKDIGASDLKDDMPFDSRGSDNWPENLGKFL 234

Query: 1887 RFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALND 1708
            RFHL KENKDTQEALG+IGKMLG+QQRSFGFAGTKDKRS+STQRVT+FKQHAKRLAALN 
Sbjct: 235  RFHLYKENKDTQEALGVIGKMLGIQQRSFGFAGTKDKRSISTQRVTIFKQHAKRLAALNS 294

Query: 1707 RLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGL 1528
            RLFGIKVGDFCY           GNRFTITLRGVVADSED+IK AA+ LGR+GFINY+GL
Sbjct: 295  RLFGIKVGDFCYVREGLVLGRLFGNRFTITLRGVVADSEDVIKEAANGLGRNGFINYYGL 354

Query: 1527 QRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQL 1348
            QRFGSGSVPTHL+G ALLRGEWKSA  LILDPREGE + I EAR  +KE GDID TL++L
Sbjct: 355  QRFGSGSVPTHLIGAALLRGEWKSAANLILDPREGEHSIIREARVSYKEHGDIDLTLKKL 414

Query: 1347 PRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQ 1168
            PRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYG  Q
Sbjct: 415  PRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGISQ 474

Query: 1167 VMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNA 988
            V+LGDLV+ K SS  ++  V  +EPEDD +            +   + EE V+SVK V++
Sbjct: 475  VILGDLVFCKESSAREVDAVDISEPEDDCND---------PYNCQAIPEENVESVKTVDS 525

Query: 987  EDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMT 808
            EDLL+G YT +DV+LPLPGSR+ YP NDIA+VYH +AKKDG++LTES+H+AKEFS+  M 
Sbjct: 526  EDLLKGIYTFEDVVLPLPGSRIFYPANDIADVYHDMAKKDGVSLTESVHNAKEFSITNMR 585

Query: 807  GSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPVNVI-EETFANGKTDKPLAV 631
            G YRRVFQRPID+ WELL Y D N+PLAETD+D I K KP ++I EE  ANG        
Sbjct: 586  GGYRRVFQRPIDYVWELLSYTDDNVPLAETDLDVIHKKKPADLIKEELLANG-------- 637

Query: 630  HNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLI 451
             N     N            + E + S+S  V        DG+   SL            
Sbjct: 638  -NPGGQSN------------DFESQGSVSNHV------AKDGSDGGSL------------ 666

Query: 450  NEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKT 271
                                 Q++S  +SD Q S++ALKL FTLPAS YATMAIRELLK 
Sbjct: 667  ---------------------QVESVCSSDAQPSKLALKLGFTLPASSYATMAIRELLKM 705

Query: 270  STSVAFHKTLN 238
            STSVA  KT+N
Sbjct: 706  STSVAHQKTMN 716


>ref|XP_008388664.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Malus
            domestica]
          Length = 703

 Score =  846 bits (2185), Expect = 0.0
 Identities = 451/771 (58%), Positives = 543/771 (70%), Gaps = 5/771 (0%)
 Frame = -3

Query: 2535 LKPLCNYSNPVQFQNLTMKNL-----DESDVGILCYISQLPGFRGVLKQRYSDFIVNEVD 2371
            LKP C+ + P       +K L     +ESDVGI CYISQLPGFRG+LKQRYSDF+ NEVD
Sbjct: 2    LKPYCSATPPPPPLTTALKALVATTTEESDVGIFCYISQLPGFRGILKQRYSDFMXNEVD 61

Query: 2370 FDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDR 2191
             +GNVVHLT+ D P E ++E       D T+ K Y  EIESFR++AG  DAE L+ F+ +
Sbjct: 62   KEGNVVHLTNLDAPVEAVQESGTT-TGDGTS-KDYTTEIESFRALAGPNDAERLETFIKQ 119

Query: 2190 IAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXX 2011
            I  G E  + PIVLSPD DK HRT VHNFFK  FKFLVTDT+DG DA+ KCIRVR     
Sbjct: 120  INSGGEDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDASSKCIRVRINSGG 179

Query: 2010 XXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIG 1831
                              +   KPFDSRGS DW + VGKFLRFHL KENKDTQEALG+IG
Sbjct: 180  QNSRGRNSRKRK------ERXDKPFDSRGSEDWSEXVGKFLRFHLYKENKDTQEALGVIG 233

Query: 1830 KMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXX 1651
            KMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKVGDFCY       
Sbjct: 234  KMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKVGDFCYVTXGLVL 293

Query: 1650 XXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLR 1471
                GN FTITLRGVVADSED IK +A  LG+ GFINYFGLQRFGSGSVPTHL+G +LLR
Sbjct: 294  GQLLGNXFTITLRGVVADSEDTIKASASALGKQGFINYFGLQRFGSGSVPTHLIGXSLLR 353

Query: 1470 GEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPG 1291
            GEWKS   + LDPREGER  I EAREY+KE+ DI+GTLR+LPRHLV+ERAILQCLKKCPG
Sbjct: 354  GEWKSTXSMFLDPREGERNVITEAREYYKETNDIEGTLRKLPRHLVSERAILQCLKKCPG 413

Query: 1290 NYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVE 1111
            NYLQAL+AIPRTLRMMYVHSYQSYLWNHAAS RV+KYG DQV+LGDLVY KG+  EK+ E
Sbjct: 414  NYLQALRAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDQVVLGDLVYCKGNETEKVTE 473

Query: 1110 VINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPG 931
            V+++E  D++  + +D   + ++++T L EEK+  VKAV AED+  G YTI+DV+LP+PG
Sbjct: 474  VVSSECVDENGDDTLDPNDLGDIADTNLPEEKLSLVKAVTAEDIQSGNYTIEDVVLPMPG 533

Query: 930  SRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLR 751
            SRV++P NDIA+V+H LAKKD I+LTES+H  KEFS+  +TG+YRR+FQ+P+DFEW +L+
Sbjct: 534  SRVIFPENDIADVFHDLAKKDEISLTESVHDVKEFSITSVTGNYRRIFQKPMDFEWXILK 593

Query: 750  YRDPNIPLAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIH 571
            Y D  IPL +TD+D IAK+KP +V                                    
Sbjct: 594  YSDGTIPLVDTDLDKIAKTKPASV------------------------------------ 617

Query: 570  EAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERL 391
            + ED  S++           DG+++     DN  Q E + N+  G            E+L
Sbjct: 618  DKEDPASLN----------GDGSLH-----DNAKQTECVDNDIGG----------NREKL 652

Query: 390  PQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 238
            P++ S S ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 653  PEVGSLSDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 703


>ref|XP_006382775.1| hypothetical protein POPTR_0005s05300g [Populus trichocarpa]
            gi|550338143|gb|ERP60572.1| hypothetical protein
            POPTR_0005s05300g [Populus trichocarpa]
          Length = 752

 Score =  845 bits (2182), Expect = 0.0
 Identities = 457/759 (60%), Positives = 538/759 (70%), Gaps = 11/759 (1%)
 Frame = -3

Query: 2478 NLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKK- 2302
            +++ESDVGILCYISQLPGFRG+LKQRY+DFIVNEVD DGNVVHLT  + PP+ +EE K+ 
Sbjct: 54   SMEESDVGILCYISQLPGFRGILKQRYADFIVNEVDTDGNVVHLTCLEPPPQMVEETKEC 113

Query: 2301 -AQVFDS--TANKSYADEIESFRSIAGDADAESLKGFLDRI--AIGAESDISPIVLSPDP 2137
             A+V D   + +KSY  EIE FRS+AGD+DAE L+  + ++    G+E  +  IVLSPD 
Sbjct: 114  GAKVSDEKMSESKSYEAEIELFRSLAGDSDAEKLESLISQVDSCTGSEDSVPHIVLSPDS 173

Query: 2136 DKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCV 1957
            DK HRT VHNFFK  FKFLVTDT DG DA+ KCIRVR                       
Sbjct: 174  DKTHRTAVHNFFKQNFKFLVTDTTDGPDASSKCIRVRLDSGGHKNNGRNSKKRK------ 227

Query: 1956 DSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDK 1777
            +   KPFDSRGS++WP+ +GKFLRFHL KENKDTQEALG+IGKMLG+Q +SFGFAGTKDK
Sbjct: 228  ERGEKPFDSRGSSNWPEHLGKFLRFHLYKENKDTQEALGIIGKMLGIQSKSFGFAGTKDK 287

Query: 1776 RSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVAD 1597
            R+VSTQRVTVFKQ A RLAALNDRL GIKVGDFC+           GNRFT+TLRGV+AD
Sbjct: 288  RAVSTQRVTVFKQQASRLAALNDRLIGIKVGDFCHVKEGLLLGRLLGNRFTVTLRGVIAD 347

Query: 1596 SEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGER 1417
            SED IK AAD+LGR GFINYFGLQRFG+GSVPTHL+G ALLRGEWK+AV +ILDPREG+ 
Sbjct: 348  SEDTIKAAADSLGRHGFINYFGLQRFGTGSVPTHLIGAALLRGEWKTAVSMILDPREGDI 407

Query: 1416 A-----AIMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTL 1252
                   I +AREY+KES DI+GTLRQLPRHLVAERA+LQCLKKCPG+YLQA+KAIPRTL
Sbjct: 408  LLLFPYVIRKAREYYKESNDIEGTLRQLPRHLVAERAVLQCLKKCPGDYLQAMKAIPRTL 467

Query: 1251 RMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSN 1072
            RMMYVH YQSYLWNHAAS RVQKYG DQV+LGDLVY KG   EK    +N+E  DD+  +
Sbjct: 468  RMMYVHGYQSYLWNHAASERVQKYGFDQVLLGDLVYCKGDDSEKETVGVNSECNDDNCDD 527

Query: 1071 GIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEV 892
              D   + E S T+L E K   VK V  ED+  G YT+DDV+LP+PGSRV++PTN+IA+V
Sbjct: 528  TYDCSHLDETSGTDLLERKNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKV 587

Query: 891  YHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDM 712
            YH LAKKD I LTES+H  KEFS+  MTGSYRRVFQ+P+DFEWELL Y D N PLAETD+
Sbjct: 588  YHDLAKKDAINLTESVHRVKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDL 647

Query: 711  DAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVN 532
            D I+K+   N+I++    GK D+          +N  +D   LP                
Sbjct: 648  DKISKTGSTNIIKQE-EQGKGDE----------DNDLSDCTKLPVC-------------- 682

Query: 531  VIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQS 352
                        NS+A+ +               DT E E ERE    Q+   S S+ Q 
Sbjct: 683  ----------SRNSIALSS---------------DTNE-ESEREVESEQV---SGSNWQE 713

Query: 351  SQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNQ 235
            +Q+ALKLS TLPASCYATMAIRELLKTSTSVA+HKTLNQ
Sbjct: 714  TQMALKLSLTLPASCYATMAIRELLKTSTSVAYHKTLNQ 752


>ref|XP_007030611.1| Pseudouridine synthase family protein, putative isoform 1 [Theobroma
            cacao] gi|508719216|gb|EOY11113.1| Pseudouridine synthase
            family protein, putative isoform 1 [Theobroma cacao]
          Length = 763

 Score =  844 bits (2180), Expect = 0.0
 Identities = 456/806 (56%), Positives = 548/806 (67%), Gaps = 29/806 (3%)
 Frame = -3

Query: 2565 CPLKPSTRCSLKPLCNYSNPVQFQNLTMKNLDESDVGILCYISQLPGFRGVLKQRYSDFI 2386
            CP    +  +  P+   SN +      M  + ESDVGILC+IS LPGFRG+LKQRYSDFI
Sbjct: 20   CPADSKSNLTKTPVIKSSNSLTL----MTTITESDVGILCFISHLPGFRGILKQRYSDFI 75

Query: 2385 VNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTA-----------NKSYADEIESFRS 2239
            VNEVD +GNVVHLTS D PPE + +      F               NK YA EI  FRS
Sbjct: 76   VNEVDTEGNVVHLTSLDAPPEVMIDVFSLNKFTQAVQEGETKTPDQLNKCYASEIIKFRS 135

Query: 2238 IAGDADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDG 2059
            +AGD DA+ L+ F+++I  G+E DI PIVLSPD DK HRT +HNFFK   +FLVTDT+DG
Sbjct: 136  LAGDTDADRLEAFINQITSGSEEDICPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVDG 195

Query: 2058 SDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFH 1879
             D++ KCIRVR                       +   KP+DSRGS+ WP+ +GKFLRFH
Sbjct: 196  PDSSSKCIRVRLNSGNNNKGRNSKKRK-------ERGDKPYDSRGSSHWPEHLGKFLRFH 248

Query: 1878 LCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLF 1699
            L KENKDTQEALGLIGKMLG+Q RSFGFAGTKDKRSVSTQRVTVFKQHA RLAALN+RL 
Sbjct: 249  LYKENKDTQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQHASRLAALNERLI 308

Query: 1698 GIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRF 1519
            GIKVGDFCY           GNRFTI LRG+VADSE+ IK + ++LGR GFINYFGLQRF
Sbjct: 309  GIKVGDFCYVKDDFLLGQLLGNRFTIILRGIVADSEETIKASVESLGRHGFINYFGLQRF 368

Query: 1518 GSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAAI------------------MEARE 1393
            GSGS+PTH +G  LLRGEW++A   ILDPREG+  ++                    ARE
Sbjct: 369  GSGSIPTHRIGATLLRGEWQAAASTILDPREGDILSLTFFFPFLLGKALFRCLTTQRARE 428

Query: 1392 YFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 1213
            Y+KE+GDI+GTLRQLPRHLVAERA+LQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLW
Sbjct: 429  YYKETGDIEGTLRQLPRHLVAERAMLQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLW 488

Query: 1212 NHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSET 1033
            NHAAS RV+KYG+++V+LGDLVY KG+  EK V+V+ +E ED++  +  D   + E+S T
Sbjct: 489  NHAASMRVEKYGSNEVVLGDLVYCKGNDAEK-VKVVPSEHEDNNFEDAYDCSQLDEISGT 547

Query: 1032 ELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLT 853
            +L E K   VKA+ A D+  G YTI+DV+LP+PGSR++YP NDIA VYH +AKKDGI+LT
Sbjct: 548  DLPEGKNNLVKAITAADISTGNYTIEDVVLPMPGSRIIYPVNDIANVYHDMAKKDGISLT 607

Query: 852  ESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPVNVIE 673
            ES+H+ KEFS+  MTGSYRRVFQ+PIDFEWELL Y D +I L+ETD+D IAK+KPVN+++
Sbjct: 608  ESVHNIKEFSITSMTGSYRRVFQKPIDFEWELLSYTDGSIALSETDLDKIAKTKPVNLVK 667

Query: 672  ETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNN 493
            E       +KP        TE  ++  + +  I   ED++            F+ GN+  
Sbjct: 668  E-------EKP-----TDGTEG-QDSSDHMEHIESFEDDKK-----------FSTGNV-- 701

Query: 492  SLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPA 313
                                    E E  RE   PQI S   S+   +Q ALKL+FTLPA
Sbjct: 702  ------------------------EVEGSREAEPPQIHSLPESNSLGTQKALKLAFTLPA 737

Query: 312  SCYATMAIRELLKTSTSVAFHKTLNQ 235
            SCYATMAIRELLKTSTSVAFHKTLNQ
Sbjct: 738  SCYATMAIRELLKTSTSVAFHKTLNQ 763


>ref|XP_008218239.1| PREDICTED: multisubstrate pseudouridine synthase 7 isoform X1 [Prunus
            mume]
          Length = 713

 Score =  843 bits (2178), Expect = 0.0
 Identities = 462/779 (59%), Positives = 546/779 (70%), Gaps = 5/779 (0%)
 Frame = -3

Query: 2559 LKPSTRC--SLKPLCNYSNP--VQFQNLT-MKNLDESDVGILCYISQLPGFRGVLKQRYS 2395
            LKP   C   LKP C+ + P     + +T MK  +E DVGI CYISQLPGFRG+LKQRYS
Sbjct: 3    LKPVPSCFSMLKPYCSATPPPPTTLKFITAMKTTEEPDVGIFCYISQLPGFRGILKQRYS 62

Query: 2394 DFIVNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGDADAE 2215
            DF+VNEVD +GNVVHLT+ D P E ++E +  +  D+T+ K Y  EIESFRS+    DAE
Sbjct: 63   DFMVNEVDTEGNVVHLTNLDAPAETVKEIE-TKTHDATS-KDYTTEIESFRSLVDPDDAE 120

Query: 2214 SLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDATLKCI 2035
             L+  +++I  G+E  I PIVLSPD DK HR  VHNFFK  FKFLVTDT+DG DA+ KCI
Sbjct: 121  RLEAIINQINSGSEDSILPIVLSPDYDKSHRRAVHNFFKENFKFLVTDTVDGPDASSKCI 180

Query: 2034 RVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKENKDT 1855
            RVR                       +   KPFDSRGS+DW + VGKFLRFHL KENKDT
Sbjct: 181  RVRINSGGQNSRGRNSRKRK------ERGDKPFDSRGSDDWSENVGKFLRFHLYKENKDT 234

Query: 1854 QEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKVGDFC 1675
            QEALG+I KMLG+Q RSFGFAGTKDKR+V+TQRVTVFKQ A RLAALNDRL GIKVGDFC
Sbjct: 235  QEALGIIAKMLGIQPRSFGFAGTKDKRAVTTQRVTVFKQLATRLAALNDRLIGIKVGDFC 294

Query: 1674 YXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGSVPTH 1495
            Y           GNRFTITLRGVVADSED IK +A  LG+ GFINYFGLQRFGSGSVPTH
Sbjct: 295  YVKEGLVLGQLLGNRFTITLRGVVADSEDTIKASAIALGKQGFINYFGLQRFGSGSVPTH 354

Query: 1494 LVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAERAIL 1315
            L+G  LLRGEWKS V L LDPREGE+ AI EAREY+KE+ DI+GTLR+LPRHLV+E+AIL
Sbjct: 355  LIGATLLRGEWKSTVSLFLDPREGEKNAITEAREYYKETNDIEGTLRRLPRHLVSEKAIL 414

Query: 1314 QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLVYSKG 1135
            QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAAS RVQKYG D+V+LGDLVY KG
Sbjct: 415  QCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLVYCKG 474

Query: 1134 SSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGEYTID 955
            +  EK+ EV+++E  D++ ++ +D   + ++S T L EE++  VKAV AED+L G YTID
Sbjct: 475  NETEKVSEVVSSECVDENGNDTLDPIDLDDISGTNLPEERLNLVKAVTAEDILSGNYTID 534

Query: 954  DVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVFQRPI 775
            DV+LP+PGSRV++P NDIA V+H LAKKD I+LTES+H+ KEFS+  MTGSYRRVFQ+P+
Sbjct: 535  DVVLPMPGSRVIFPENDIAHVFHDLAKKDAISLTESVHNVKEFSITSMTGSYRRVFQKPM 594

Query: 774  DFEWELLRYRDPNIPLAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTENLRND 595
            DFEWE+L+Y D N PL +TD D IAK+KP ++ E+   + KT          Q+E L ND
Sbjct: 595  DFEWEILKYIDGNKPLVDTDFDKIAKTKPSSLNEDGRLHDKT---------KQSECLDND 645

Query: 594  QEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPDTYEA 415
                 D                                DN A+ +      E LP     
Sbjct: 646  IGLQTD--------------------------------DNGAKAKG-----EELP----- 663

Query: 414  EDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 238
                     Q +S   ++ Q +Q A KLSFTLPASCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 664  ---------QAESLCDTNPQETQTAFKLSFTLPASCYATMAIRELLKTSTSVAFHKTLN 713


>ref|XP_006471920.1| PREDICTED: multisubstrate pseudouridine synthase 7-like isoform X1
            [Citrus sinensis]
          Length = 739

 Score =  840 bits (2170), Expect = 0.0
 Identities = 448/751 (59%), Positives = 528/751 (70%), Gaps = 1/751 (0%)
 Frame = -3

Query: 2487 TMKNLDESDVGILCYISQLPGFRGVLKQRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEE 2308
            TMK +DESD GILC+IS LPGFRG+LKQRY DFIVNEVD D  VVHLTS D+PPE+   E
Sbjct: 44   TMKTVDESDAGILCFISNLPGFRGILKQRYCDFIVNEVDTDRKVVHLTSLDVPPEEAAVE 103

Query: 2307 KKAQVFDSTANKSYADEIESFRSIAGDADAESLKGFLDRIAIGAESD-ISPIVLSPDPDK 2131
                      N+SYA EIESFRS+AGD+DA+ L+  ++++  G   D I PIVLS + DK
Sbjct: 104  HNETKASDQLNRSYASEIESFRSLAGDSDAQCLETLINQVTSGKNEDSIPPIVLSANSDK 163

Query: 2130 LHRTEVHNFFKAKFKFLVTDTLDGSDATLKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDS 1951
             HRT +HNFFK  FKFLVTDT+DG DA+ KCIRVR                       + 
Sbjct: 164  SHRTAIHNFFKDNFKFLVTDTVDGPDASSKCIRVRLNSGGNNNSMGRNSKKRK-----ER 218

Query: 1950 THKPFDSRGSNDWPDGVGKFLRFHLCKENKDTQEALGLIGKMLGMQQRSFGFAGTKDKRS 1771
               PFDSRGS +WP+ +GKFLRFHL KENKDTQEALGLI KMLG+  RSFGFAGTKDKRS
Sbjct: 219  GDNPFDSRGSENWPEQLGKFLRFHLYKENKDTQEALGLISKMLGILPRSFGFAGTKDKRS 278

Query: 1770 VSTQRVTVFKQHAKRLAALNDRLFGIKVGDFCYXXXXXXXXXXXGNRFTITLRGVVADSE 1591
            VSTQRVTVFKQ A +LAALN RL GI++GDFCY           GNRFTITLRGVV DSE
Sbjct: 279  VSTQRVTVFKQRASKLAALNKRLIGIRLGDFCYVKEGLLLGQLLGNRFTITLRGVVVDSE 338

Query: 1590 DIIKGAADNLGRDGFINYFGLQRFGSGSVPTHLVGTALLRGEWKSAVGLILDPREGERAA 1411
            D+IK +A++LGR+GFINYFGLQRFGSGSVPTHLVG  LLRGEWKSAV +ILDPREGER  
Sbjct: 339  DVIKASANSLGRNGFINYFGLQRFGSGSVPTHLVGATLLRGEWKSAVKMILDPREGERNE 398

Query: 1410 IMEAREYFKESGDIDGTLRQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 1231
            I +AREY+KE+ DIDGTLR+LPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS
Sbjct: 399  ISKAREYYKETDDIDGTLRKLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHS 458

Query: 1230 YQSYLWNHAASRRVQKYGNDQVMLGDLVYSKGSSHEKLVEVINAEPEDDSSSNGIDYGSI 1051
            YQS+LWNHAAS RVQK+G + V++GDLV+ KG   EK +  +N E E +SS++  D   +
Sbjct: 459  YQSFLWNHAASARVQKHGTEHVVVGDLVFCKGDDTEKELGCVNPEFEYESSNDADDSSHL 518

Query: 1050 TELSETELFEEKVKSVKAVNAEDLLRGEYTIDDVILPLPGSRVLYPTNDIAEVYHVLAKK 871
             E+ ET+  + +   VK V AED+  G+YTIDDV+LPLPGSRV+YP ND+AEVYH LA+K
Sbjct: 519  DEVPETDHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEK 578

Query: 870  DGITLTESMHSAKEFSMICMTGSYRRVFQRPIDFEWELLRYRDPNIPLAETDMDAIAKSK 691
            DGI LTES+H+ KEFS+  MTG+YRRVFQ+P+DFEWELL Y D N PLAETD+D IAK K
Sbjct: 579  DGINLTESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDK 638

Query: 690  PVNVIEETFANGKTDKPLAVHNVAQTENLRNDQEDLPDIHEAEDERSISKSVNVIEEAFA 511
              N+++E                A   N + D  D       +   S+SK + +  E   
Sbjct: 639  LANIVKE--------------EEAVCGNKKKDPSDC-----MKQSESLSKDIKLSTE--- 676

Query: 510  DGNMNNSLAVDNVAQRENLINEQEGLPDTYEAEDEREERLPQIKSFSTSDVQSSQIALKL 331
                NN                        EA   +E + P ++S   +D Q  Q+ALKL
Sbjct: 677  ----NN------------------------EAACAKEVKQPHVESVCGADSQGKQMALKL 708

Query: 330  SFTLPASCYATMAIRELLKTSTSVAFHKTLN 238
              TLP+SCYATMAIRELLKTSTSVAFHKTLN
Sbjct: 709  GLTLPSSCYATMAIRELLKTSTSVAFHKTLN 739


>ref|XP_008370684.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Malus
            domestica]
          Length = 716

 Score =  839 bits (2167), Expect = 0.0
 Identities = 454/783 (57%), Positives = 548/783 (69%), Gaps = 9/783 (1%)
 Frame = -3

Query: 2559 LKPSTRC--SLKPLCNYSNPVQFQNLTM-------KNLDESDVGILCYISQLPGFRGVLK 2407
            LKP+  C   LKP C+ + P      T        K  +ESDVGI CYISQLPGFRGVLK
Sbjct: 3    LKPAPSCFSMLKPYCSATPPPPPPPTTALKALMAXKTXEESDVGIFCYISQLPGFRGVLK 62

Query: 2406 QRYSDFIVNEVDFDGNVVHLTSFDLPPEKIEEEKKAQVFDSTANKSYADEIESFRSIAGD 2227
            QRYSDF+VNEVD +GNVVHLT+ D P E ++E          A+K Y  EIESFR++A  
Sbjct: 63   QRYSDFMVNEVDKEGNVVHLTNLDAPVEAVKES--GTTTSDGASKDYTTEIESFRALADP 120

Query: 2226 ADAESLKGFLDRIAIGAESDISPIVLSPDPDKLHRTEVHNFFKAKFKFLVTDTLDGSDAT 2047
             DAE L+  +++I   ++  + PIVLSPD DK HRT VHNFFK  FKFLVTDT+DG DA+
Sbjct: 121  NDAERLETLINQINSSSDDGVMPIVLSPDYDKSHRTAVHNFFKQHFKFLVTDTVDGPDAS 180

Query: 2046 LKCIRVRFCXXXXXXXXXXXXXXXXXXDCVDSTHKPFDSRGSNDWPDGVGKFLRFHLCKE 1867
             KCIRVR                       +   KPFDSRGS DW + VGKFLRFHL KE
Sbjct: 181  SKCIRVRINSGGQSNRGRNSRKRK------ERGDKPFDSRGSEDWSEHVGKFLRFHLYKE 234

Query: 1866 NKDTQEALGLIGKMLGMQQRSFGFAGTKDKRSVSTQRVTVFKQHAKRLAALNDRLFGIKV 1687
            NKDTQEALG+IGKMLG+Q RSFGFAGTKDKR+V+TQRVTVFK+ A +LAALNDRL GIKV
Sbjct: 235  NKDTQEALGVIGKMLGVQPRSFGFAGTKDKRAVTTQRVTVFKKLASKLAALNDRLIGIKV 294

Query: 1686 GDFCYXXXXXXXXXXXGNRFTITLRGVVADSEDIIKGAADNLGRDGFINYFGLQRFGSGS 1507
            GDFCY           GNRFTITLRGVVADSED IK +A  LG+ GFINYFGLQRFGSGS
Sbjct: 295  GDFCYVTEGLVLGQLLGNRFTITLRGVVADSEDTIKASASALGKQGFINYFGLQRFGSGS 354

Query: 1506 VPTHLVGTALLRGEWKSAVGLILDPREGERAAIMEAREYFKESGDIDGTLRQLPRHLVAE 1327
            VPTH +G +LLRGEWKS V + LDPREGER  I EAREY+KE+ DI+GTLR+LPRHLV+E
Sbjct: 355  VPTHRIGASLLRGEWKSTVSMFLDPREGERNVITEAREYYKETNDIEGTLRKLPRHLVSE 414

Query: 1326 RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASRRVQKYGNDQVMLGDLV 1147
            RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWN+AAS RV+KYG D+V+LGDLV
Sbjct: 415  RAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNNAASMRVKKYGTDRVVLGDLV 474

Query: 1146 YSKGSSHEKLVEVINAEPEDDSSSNGIDYGSITELSETELFEEKVKSVKAVNAEDLLRGE 967
            Y KG+  EK+ EV+ +E  D++  + +D   + +++ET L EEK+  VKAV AED+  G 
Sbjct: 475  YCKGNETEKVTEVVTSECIDENGDDMLDPNDLGDIAETNLPEEKLNLVKAVTAEDIRSGI 534

Query: 966  YTIDDVILPLPGSRVLYPTNDIAEVYHVLAKKDGITLTESMHSAKEFSMICMTGSYRRVF 787
            YTI+DV+LP+PGSRV++P NDIA+V+H LAKKD I+LTES+H+ KEFS+  +TG+YRRVF
Sbjct: 535  YTIEDVVLPMPGSRVIFPENDIADVFHDLAKKDAISLTESVHNVKEFSITSVTGNYRRVF 594

Query: 786  QRPIDFEWELLRYRDPNIPLAETDMDAIAKSKPVNVIEETFANGKTDKPLAVHNVAQTEN 607
            Q+P+DFEWE+L+Y D N+PL +TD+D I+K+KP  V                        
Sbjct: 595  QKPMDFEWEILKYVDGNVPLVDTDLDKISKAKPAKV------------------------ 630

Query: 606  LRNDQEDLPDIHEAEDERSISKSVNVIEEAFADGNMNNSLAVDNVAQRENLINEQEGLPD 427
               D+ED               SVN       DG+++     D+  Q E + N+   + D
Sbjct: 631  ---DKED-------------PSSVN------GDGSLH-----DSAXQSECIDND---IXD 660

Query: 426  TYEAEDEREERLPQIKSFSTSDVQSSQIALKLSFTLPASCYATMAIRELLKTSTSVAFHK 247
            T        E++  + S S ++ Q +Q+ALKLSFTLPASCYATMAIRELLKTSTSVAFHK
Sbjct: 661  T-------GEKVXXVGSLSDTNPQETQMALKLSFTLPASCYATMAIRELLKTSTSVAFHK 713

Query: 246  TLN 238
            TLN
Sbjct: 714  TLN 716