BLASTX nr result

ID: Cinnamomum23_contig00005237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00005237
         (1303 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266776.1| PREDICTED: 30S ribosomal protein 2, chloropl...   227   2e-56
ref|XP_008775879.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   221   1e-54
ref|XP_010942624.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   214   1e-52
ref|XP_009417600.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   208   6e-51
ref|XP_002285735.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   204   2e-49
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   204   2e-49
ref|XP_007136284.1| hypothetical protein PHAVU_009G033600g [Phas...   190   2e-45
emb|CDP20861.1| unnamed protein product [Coffea canephora]            189   4e-45
gb|KHN08962.1| 28 kDa ribonucleoprotein, chloroplastic [Glycine ...   189   5e-45
ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   189   5e-45
ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chlorop...   189   5e-45
gb|ACU23303.1| unknown [Glycine max]                                  189   5e-45
ref|XP_011074215.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   188   7e-45
ref|XP_010026026.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   187   2e-44
ref|XP_007018692.1| RNA-binding family protein, putative [Theobr...   186   3e-44
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps...   186   4e-44
ref|XP_010101007.1| 28 kDa ribonucleoprotein [Morus notabilis] g...   185   8e-44
gb|KHF99254.1| 29 kDa ribonucleoprotein B, chloroplastic [Gossyp...   184   2e-43
ref|XP_011012428.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   182   4e-43
ref|XP_010421828.1| PREDICTED: 30S ribosomal protein 2, chloropl...   182   4e-43

>ref|XP_010266776.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Nelumbo nucifera]
            gi|719968894|ref|XP_010266785.1| PREDICTED: 30S ribosomal
            protein 2, chloroplastic [Nelumbo nucifera]
          Length = 302

 Score =  227 bits (578), Expect = 2e-56
 Identities = 138/309 (44%), Positives = 185/309 (59%), Gaps = 15/309 (4%)
 Frame = -3

Query: 1250 MALRLPCFPSTLFGGN------TQQKEVPNLFSWPNPSQFKPPRTLFFSXXXXXXXXXXX 1089
            MALRLP  PSTL G        + Q       S+   S    P   F             
Sbjct: 1    MALRLPWLPSTLSGDQHCRTALSLQIPFQTKLSFSTSSISPGPGLDFLPNTTKTSTTGRR 60

Query: 1088 XXXXXLFPVSLAAQQQLQTP--STDSQQQQEPIPD-------RTRLIAQNIPWTCSAQDI 936
                    +S A +QQ  +P  ST +   + P+         +TRLIAQN+PWTC+++DI
Sbjct: 61   RTNL----ISCATEQQ-DSPLASTSTVTVESPVSGADGESVIQTRLIAQNVPWTCTSEDI 115

Query: 935  RSLFEKYGTVTDVELSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSR 756
            R+LFEK+GTV DVELSM NK +NRGLAFVTMGS          L++ E  GRV+K+ +++
Sbjct: 116  RNLFEKHGTVEDVELSMHNKTRNRGLAFVTMGSEEEALAALTNLEAQEFQGRVLKVNYAK 175

Query: 755  SLKKKPSVTADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGY 576
            SLKKKPSV  + V  ++VFVGNL+W+V S DL EFFG   GN + AEV++ +NPR+  GY
Sbjct: 176  SLKKKPSVRPEPVIKHNVFVGNLSWRVRSRDLREFFGSGTGNVVSAEVIFQSNPRKSTGY 235

Query: 575  GFVSFSSKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNE 396
            GFVSFSS EE EAAI+ + GK+LMGR +RL LSK+D     +   GN+ +E S +VN + 
Sbjct: 236  GFVSFSSPEEAEAAISAFSGKKLMGRPVRLALSKRDLK--GQSEVGNQVEEMSNEVNGDG 293

Query: 395  GPANNTDEV 369
              ++N+DE+
Sbjct: 294  ELSDNSDEM 302


>ref|XP_008775879.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Phoenix
           dactylifera]
          Length = 309

 Score =  221 bits (562), Expect = 1e-54
 Identities = 116/205 (56%), Positives = 144/205 (70%)
 Frame = -3

Query: 989 RTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNRGLAFVTMGSXXXXXXXXX 810
           R RLIAQNIPWTC+A+DIR++FEK+GTVTDVELSM+N  +NRGLAFVTM S         
Sbjct: 103 RKRLIAQNIPWTCTAEDIRNIFEKHGTVTDVELSMYNSTRNRGLAFVTMASEEEALAALN 162

Query: 809 XLDSHELDGRVIKIEFSRSLKKKPSVTADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGN 630
            L+S++LDGRVIK+EF+RSLKK  SV    V  Y+VFVGNLAW+V S DL E F   +GN
Sbjct: 163 NLNSYDLDGRVIKVEFARSLKKDSSVAMVPVSKYNVFVGNLAWRVRSHDLRELFNA-SGN 221

Query: 629 ALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFER 450
            L AEVV+ +NPRR AGYGFVSF+SKEE EAAIA ++GK+LMGR I L   K      E 
Sbjct: 222 VLSAEVVFQSNPRRSAGYGFVSFASKEEAEAAIATFNGKKLMGRPINLAFGKIQTDSAEA 281

Query: 449 ESKGNKFKEDSVKVNDNEGPANNTD 375
           +   N+  +++    +  G  +N D
Sbjct: 282 KLSTNEQLDEASSAANGSGEQSNQD 306


>ref|XP_010942624.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic isoform X1
            [Elaeis guineensis] gi|743859195|ref|XP_010942625.1|
            PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic
            isoform X1 [Elaeis guineensis]
          Length = 289

 Score =  214 bits (545), Expect = 1e-52
 Identities = 118/237 (49%), Positives = 154/237 (64%), Gaps = 1/237 (0%)
 Frame = -3

Query: 1067 PVSLAAQQQLQTPSTDSQQQQE-PIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVEL 891
            P++  +     T +  +++  E P   R RLIAQNIPWTC+A+DIR LFE++GTV DVEL
Sbjct: 56   PIAALSTTSSATETAAAEESTEIPGEVRKRLIAQNIPWTCTAEDIRKLFEQHGTVIDVEL 115

Query: 890  SMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPSVTADSVKM 711
            SM+N+ +NRGLAFVTM S          L+S+ELDGRVIK+EF+RSLKK  S     V  
Sbjct: 116  SMYNRTRNRGLAFVTMASEEEAVAALNNLNSYELDGRVIKVEFARSLKKDSSAATIPVPK 175

Query: 710  YDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAI 531
            ++VFVGNL+W+V S DL E F   +GN L AEV++ +NPRR AGYGFVSF+SKEE EAAI
Sbjct: 176  FNVFVGNLSWRVRSRDLRELFNA-SGNVLSAEVIFQSNPRRSAGYGFVSFASKEEAEAAI 234

Query: 530  ANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANNTDEVSSE 360
            A Y+GK+LMGR + L          E +   N+      +++D    AN   E S+E
Sbjct: 235  ATYNGKKLMGRPVNLAFGTIQTDSAEAKLSRNE------QLDDTSNAANGRREQSNE 285


>ref|XP_009417600.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Musa acuminata
            subsp. malaccensis] gi|695058564|ref|XP_009417601.1|
            PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic
            [Musa acuminata subsp. malaccensis]
          Length = 272

 Score =  208 bits (530), Expect = 6e-51
 Identities = 114/221 (51%), Positives = 147/221 (66%)
 Frame = -3

Query: 1064 VSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSM 885
            +S  A      P+   +  +     RTRLIAQN+PWTC+  DIR+LF K+G V DVELSM
Sbjct: 51   ISAFAALSSSAPAAPVETAESSGAARTRLIAQNVPWTCTPDDIRTLFSKHGNVVDVELSM 110

Query: 884  FNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPSVTADSVKMYD 705
            +N  +NRGLAFVTM S          L+S++LDGRVIK+EF+RS+KK P V A  V  Y+
Sbjct: 111  YNSSRNRGLAFVTMASEEEALAALSHLNSYDLDGRVIKVEFARSVKKAPVVAAGPVPKYN 170

Query: 704  VFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIAN 525
            VFVGNL W+V S DL E F   +GN L AEV++ +NPRR AGYGFVSF+SKEE EAAI  
Sbjct: 171  VFVGNLTWRVRSRDLRELFS-GSGNILSAEVIFQSNPRRSAGYGFVSFASKEEAEAAITT 229

Query: 524  YDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVND 402
             +G +LMGR IRL L K  +   + E+K + + E S +++D
Sbjct: 230  LNGNKLMGRRIRLVLGK--DQAVDAENKVDTY-EQSDEISD 267


>ref|XP_002285735.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
            gi|731428489|ref|XP_010664354.1| PREDICTED: 28 kDa
            ribonucleoprotein, chloroplastic [Vitis vinifera]
            gi|731428491|ref|XP_010664355.1| PREDICTED: 28 kDa
            ribonucleoprotein, chloroplastic [Vitis vinifera]
            gi|302142004|emb|CBI19207.3| unnamed protein product
            [Vitis vinifera]
          Length = 294

 Score =  204 bits (518), Expect = 2e-49
 Identities = 115/249 (46%), Positives = 155/249 (62%), Gaps = 10/249 (4%)
 Frame = -3

Query: 1070 FPVSLAAQQQLQTPSTDS--------QQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKY 915
            F VS +AQ Q   P++ S        Q  +E    RTRLIAQNIPWTC+AQDIRSLFEKY
Sbjct: 53   FHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKY 112

Query: 914  GTVTDVELSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPS 735
            GTV DVELSM NK +NRGLAF++MGS          L+S+EL+GR IK+ ++   KKKPS
Sbjct: 113  GTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPS 172

Query: 734  --VTADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSF 561
              +    V  Y++F+ NL ++  + DL EFF   N N + AEV++H NPRR +GYGFVSF
Sbjct: 173  SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSF 232

Query: 560  SSKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANN 381
             SKEE + A++++ G+  MGR +R+  S++     +RE+K +   ED         P N+
Sbjct: 233  GSKEEADTALSSFQGQMFMGRPLRVARSRR---FVKRENKMSDQTEDVA------NPLNS 283

Query: 380  TDEVSSEAE 354
              E S E +
Sbjct: 284  NSEQSGEGD 292


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  204 bits (518), Expect = 2e-49
 Identities = 115/249 (46%), Positives = 155/249 (62%), Gaps = 10/249 (4%)
 Frame = -3

Query: 1070 FPVSLAAQQQLQTPSTDS--------QQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKY 915
            F VS +AQ Q   P++ S        Q  +E    RTRLIAQNIPWTC+AQDIRSLFEKY
Sbjct: 53   FHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKY 112

Query: 914  GTVTDVELSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPS 735
            GTV DVELSM NK +NRGLAF++MGS          L+S+EL+GR IK+ ++   KKKPS
Sbjct: 113  GTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPS 172

Query: 734  --VTADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSF 561
              +    V  Y++F+ NL ++  + DL EFF   N N + AEV++H NPRR +GYGFVSF
Sbjct: 173  SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSF 232

Query: 560  SSKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANN 381
             SKEE + A++++ G+  MGR +R+  S++     +RE+K +   ED         P N+
Sbjct: 233  GSKEEADTALSSFQGQMFMGRPLRVARSRR---FVKRENKMSDQTEDVA------NPLNS 283

Query: 380  TDEVSSEAE 354
              E S E +
Sbjct: 284  NSEQSGEGD 292


>ref|XP_007136284.1| hypothetical protein PHAVU_009G033600g [Phaseolus vulgaris]
            gi|593268215|ref|XP_007136285.1| hypothetical protein
            PHAVU_009G033600g [Phaseolus vulgaris]
            gi|561009371|gb|ESW08278.1| hypothetical protein
            PHAVU_009G033600g [Phaseolus vulgaris]
            gi|561009372|gb|ESW08279.1| hypothetical protein
            PHAVU_009G033600g [Phaseolus vulgaris]
          Length = 306

 Score =  190 bits (482), Expect = 2e-45
 Identities = 95/189 (50%), Positives = 134/189 (70%), Gaps = 6/189 (3%)
 Frame = -3

Query: 1019 SQQQQEPIPD----RTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNRGLAF 852
            S+QQ +P+ +    RTRL+AQN+PWT + +DIRSLFEK+G V DVELSM+ K +NRGLAF
Sbjct: 65   SEQQAQPVTEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLDVELSMYKKDRNRGLAF 124

Query: 851  VTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFVGNLAWK 678
            V MGS          L+S+E +GRV+++ ++R  KKK  P V   S   +++FV NL+++
Sbjct: 125  VEMGSPEEALEALNKLESYEFEGRVMRVNYARPKKKKTPPPVKPSSGVTFNLFVANLSYE 184

Query: 677  VTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKELMGR 498
              S+DL EFF    G  +RAEVV+H +PR+P+GYGFVSF SK+E EAA++ + GK+ MGR
Sbjct: 185  AKSTDLKEFFDSGTGKVVRAEVVFHESPRKPSGYGFVSFKSKKEAEAALSEFQGKDFMGR 244

Query: 497  SIRLHLSKK 471
            SIR+   ++
Sbjct: 245  SIRVDRGRR 253


>emb|CDP20861.1| unnamed protein product [Coffea canephora]
          Length = 302

 Score =  189 bits (480), Expect = 4e-45
 Identities = 114/305 (37%), Positives = 163/305 (53%), Gaps = 19/305 (6%)
 Frame = -3

Query: 1256 LVMALRLPCFPSTLFGGNTQQKEVPNLFSWPNPSQFKPPR---TLFFSXXXXXXXXXXXX 1086
            L+  L LP  P+  F  +            P P+  +PP    TL F             
Sbjct: 3    LLRLLHLPSCPTNFFCFHQNLSSAS-----PQPATHRPPTLNATLSFPSLSFKLPFKSQR 57

Query: 1085 XXXXLFPVSLAAQQQLQTPST-----DSQQQQEPIPD---------RTRLIAQNIPWTCS 948
                 F V  +AQ Q  T ++     D+Q+++E   D         +TR++AQN+PWT +
Sbjct: 58   FNLFEFQVPFSAQAQPITQNSENAEKDNQEEEEEEEDDEGEEEELSKTRILAQNVPWTST 117

Query: 947  AQDIRSLFEKYGTVTDVELSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKI 768
              D+R LFEKYGTV D+ELSM+NK +NRGLAFVTM S          L+S++  GRV+K+
Sbjct: 118  VDDLRPLFEKYGTVVDIELSMYNKTRNRGLAFVTMASHEEALAAFRNLESYDYQGRVLKL 177

Query: 767  EFSRSLKKKPSV--TADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNP 594
             +++  K KP+      ++ ++++FV NL +   + DL EFF   NGN + AE+++  NP
Sbjct: 178  NWAKPKKIKPATPPKPKTLPIHNLFVANLHFAARAKDLKEFFNANNGNVVSAEIIFEDNP 237

Query: 593  RRPAGYGFVSFSSKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSV 414
            RR AGYGFVSF++KEE EAA+  + GKE MGR IR+  S+    RF R       + D  
Sbjct: 238  RRSAGYGFVSFNTKEEAEAALVGFKGKEFMGRPIRVARSR----RFLRPQTKADVQSDIA 293

Query: 413  KVNDN 399
              N N
Sbjct: 294  TANSN 298


>gb|KHN08962.1| 28 kDa ribonucleoprotein, chloroplastic [Glycine soja]
          Length = 313

 Score =  189 bits (479), Expect = 5e-45
 Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 10/233 (4%)
 Frame = -3

Query: 1028 STDSQQQQEPIPD-----RTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNR 864
            ST  QQ +EP+       RTRL+AQN+PWT + +DIR+LFEK+G V +VELSM+ K +NR
Sbjct: 67   STSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNR 126

Query: 863  GLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFVGN 690
            GLAFV MGS          L+S+E +GRVIK+ ++R  K+K  P      V  +++FV N
Sbjct: 127  GLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVAN 186

Query: 689  LAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKE 510
            L+++ +S DL EFF +  G  + AEVVY  NPRRP+GYGFVSF SK+E EAA+A + GK 
Sbjct: 187  LSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKV 246

Query: 509  LMGRSIRLHLSKKDNARFERESKGNKFKEDS---VKVNDNEGPANNTDEVSSE 360
             MGR IR+   ++     ++   G+   ED+   + VN  E P        SE
Sbjct: 247  FMGRPIRVDRGRR---FVQQPGDGSAKSEDTPSELSVNGAEAPQPAEGSAKSE 296


>ref|XP_006660227.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Oryza
            brachyantha]
          Length = 352

 Score =  189 bits (479), Expect = 5e-45
 Identities = 107/221 (48%), Positives = 143/221 (64%), Gaps = 1/221 (0%)
 Frame = -3

Query: 1070 FPVSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVEL 891
            FP   A+          ++  +EP   RTRLIAQNIPW C+A D+R+LF K+G+V DVEL
Sbjct: 128  FPACSASASVAAGQQPAAEAVEEPEGPRTRLIAQNIPWDCTADDMRALFGKHGSVVDVEL 187

Query: 890  SMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPSVTADSVKM 711
            SM+N  +NRGLAFVTMGS          L+S  L+ R IK++F+RS KK+P V +  +  
Sbjct: 188  SMYNSSRNRGLAFVTMGSEEEALSALNNLNSTTLNDRTIKVDFARSRKKRPVVPSAPMPK 247

Query: 710  YDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYH-TNPRRPAGYGFVSFSSKEEVEAA 534
            + VFVGNL W+V S  L E F   N      EV++H T+PRR AGYGFVSFSSKE  EAA
Sbjct: 248  HSVFVGNLTWRVRSRHLRELF-ASNPGLQSVEVIFHTTSPRRSAGYGFVSFSSKEAAEAA 306

Query: 533  IANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVK 411
            I+ ++G +LMGRSI + + K DNA   +++K  + KE+ +K
Sbjct: 307  ISTFNGTKLMGRSINV-MFKDDNA---KKNKSAEPKEEDLK 343


>ref|XP_003526568.2| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
          Length = 345

 Score =  189 bits (479), Expect = 5e-45
 Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 10/233 (4%)
 Frame = -3

Query: 1028 STDSQQQQEPIPD-----RTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNR 864
            ST  QQ +EP+       RTRL+AQN+PWT + +DIR+LFEK+G V +VELSM+ K +NR
Sbjct: 99   STSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNR 158

Query: 863  GLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFVGN 690
            GLAFV MGS          L+S+E +GRVIK+ ++R  K+K  P      V  +++FV N
Sbjct: 159  GLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVAN 218

Query: 689  LAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKE 510
            L+++ +S DL EFF +  G  + AEVVY  NPRRP+GYGFVSF SK+E EAA+A + GK 
Sbjct: 219  LSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKV 278

Query: 509  LMGRSIRLHLSKKDNARFERESKGNKFKEDS---VKVNDNEGPANNTDEVSSE 360
             MGR IR+   ++     ++   G+   ED+   + VN  E P        SE
Sbjct: 279  FMGRPIRVDRGRR---FVQQPGDGSAKSEDTPSELSVNGAEAPQPAEGSAKSE 328


>gb|ACU23303.1| unknown [Glycine max]
          Length = 315

 Score =  189 bits (479), Expect = 5e-45
 Identities = 105/233 (45%), Positives = 144/233 (61%), Gaps = 10/233 (4%)
 Frame = -3

Query: 1028 STDSQQQQEPIPD-----RTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNR 864
            ST  QQ +EP+       RTRL+AQN+PWT + +DIR+LFEK+G V +VELSM+ K +NR
Sbjct: 69   STSEQQTEEPLVSEEEFSRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKKNRNR 128

Query: 863  GLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFVGN 690
            GLAFV MGS          L+S+E +GRVIK+ ++R  K+K  P      V  +++FV N
Sbjct: 129  GLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTAPPPVKPKVVTFNLFVAN 188

Query: 689  LAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKE 510
            L+++ +S DL EFF +  G  + AEVVY  NPRRP+GYGFVSF SK+E EAA+A + GK 
Sbjct: 189  LSYEASSKDLKEFFDLGTGRVVSAEVVYRDNPRRPSGYGFVSFKSKKEAEAALAEFQGKV 248

Query: 509  LMGRSIRLHLSKKDNARFERESKGNKFKEDS---VKVNDNEGPANNTDEVSSE 360
             MGR IR+   ++     ++   G+   ED+   + VN  E P        SE
Sbjct: 249  FMGRPIRVDRGRR---FVQQPGDGSAKSEDTPSELSVNGAEAPQPAEGSAKSE 298


>ref|XP_011074215.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Sesamum
            indicum]
          Length = 269

 Score =  188 bits (478), Expect = 7e-45
 Identities = 100/225 (44%), Positives = 142/225 (63%), Gaps = 9/225 (4%)
 Frame = -3

Query: 1052 AQQQLQTPSTDSQQ-------QQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVE 894
            AQ Q+Q   T   +       ++E    +TRL+ QN+PWTC+  DIR LF  YGTV D+E
Sbjct: 49   AQVQVQAQPTIKSETAIENVVEEEEEVSKTRLLVQNVPWTCTVDDIRPLFANYGTVVDIE 108

Query: 893  LSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPSVTAD--S 720
             SM+NK KNRGLAFVTMGS          L+S E +GRV+K+ +++  KKKPS       
Sbjct: 109  FSMYNKTKNRGLAFVTMGSHEEALAALNNLESTEFEGRVLKLNWAKPKKKKPSSLPQPKP 168

Query: 719  VKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVE 540
            + ++++FV NL ++  ++DL  FF  +N N + AEV++  NPRR AGYGFVSF++K E E
Sbjct: 169  LPVHNLFVANLPFQAGANDLKNFFNADNANVVSAEVIFQDNPRRSAGYGFVSFNTKAEAE 228

Query: 539  AAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVN 405
            AA+A + GKE MGR+IR+  S+    RF R+   +  + +S +VN
Sbjct: 229  AALAIFQGKEFMGRAIRVARSR----RFLRQETKSAIQSESAEVN 269


>ref|XP_010026026.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Eucalyptus
            grandis] gi|629118598|gb|KCW83088.1| hypothetical protein
            EUGRSUZ_B00046 [Eucalyptus grandis]
            gi|629118599|gb|KCW83089.1| hypothetical protein
            EUGRSUZ_B00046 [Eucalyptus grandis]
          Length = 307

 Score =  187 bits (474), Expect = 2e-44
 Identities = 89/184 (48%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
 Frame = -3

Query: 1016 QQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFKNRGLAFVTMGS 837
            ++++E    +TRLIAQN+PWTC+A+D+RSLFEK+GTV +VELSM NK +NRGLAFV MGS
Sbjct: 94   KEEEEAEFSKTRLIAQNVPWTCTAEDVRSLFEKHGTVVEVELSMHNKMRNRGLAFVEMGS 153

Query: 836  XXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFVGNLAWKVTSSD 663
                      L+S E +GRV+K+ +++  KKK  P      +  +++F+ NL+++  + D
Sbjct: 154  AEEALNALNSLESSEFEGRVLKVNYAKLRKKKSPPPAQPRPIATFNLFIANLSYEARAKD 213

Query: 662  LSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDGKELMGRSIRLH 483
            L EFF   +G    AEV++H NPRR +GYGFVSF SK+E EAA+  ++GK+ MGR +R+ 
Sbjct: 214  LREFFDAGSGKVASAEVIFHDNPRRSSGYGFVSFKSKKEAEAALTTFEGKDFMGRPLRVA 273

Query: 482  LSKK 471
             SK+
Sbjct: 274  RSKQ 277


>ref|XP_007018692.1| RNA-binding family protein, putative [Theobroma cacao]
            gi|508724020|gb|EOY15917.1| RNA-binding family protein,
            putative [Theobroma cacao]
          Length = 290

 Score =  186 bits (473), Expect = 3e-44
 Identities = 97/232 (41%), Positives = 145/232 (62%), Gaps = 7/232 (3%)
 Frame = -3

Query: 1070 FPVSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVEL 891
            F +  +A  Q+     + Q+Q E    +TRLIAQN+PWTC+ +DIRSLFEKYGTV DVEL
Sbjct: 58   FILHFSATTQVPALKVNEQEQHEEEFSKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVEL 117

Query: 890  SMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPS--VTADSV 717
            SM NK +NRGLAFV+M S          L+S+E +GR +++ +++  KK+P+       V
Sbjct: 118  SMHNKARNRGLAFVSMASPEEALAALNNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPV 177

Query: 716  KMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEA 537
              +++FV NL+++  +  L EFF  E  N + AEV++H NPR+ +GYGFVSF SK+E +A
Sbjct: 178  PAFNLFVANLSYEARAKHLKEFFSSEGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADA 237

Query: 536  AIANYDGKELMGRSIRLHLSK-----KDNARFERESKGNKFKEDSVKVNDNE 396
            A++ + GK  MGR IR+  S+     + +   + + K N+   D  +V+  E
Sbjct: 238  AMSAFQGKMFMGRPIRVARSRQFVKVQSDDSSQPDDKSNELNFDLEQVDTEE 289


>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
            gi|565460694|ref|XP_006288346.1| hypothetical protein
            CARUB_v10001593mg [Capsella rubella]
            gi|482557051|gb|EOA21243.1| hypothetical protein
            CARUB_v10001593mg [Capsella rubella]
            gi|482557052|gb|EOA21244.1| hypothetical protein
            CARUB_v10001593mg [Capsella rubella]
          Length = 297

 Score =  186 bits (471), Expect = 4e-44
 Identities = 112/300 (37%), Positives = 165/300 (55%), Gaps = 3/300 (1%)
 Frame = -3

Query: 1244 LRLPCFPSTLFGGNTQQKEVPNLFSWPNPSQFKPPRTLFFSXXXXXXXXXXXXXXXXLFP 1065
            LRLPC    + G  + QK   +  S  N S      +L  S                   
Sbjct: 4    LRLPCISLQILGHKSNQKNPNSKVSLSNYSLSWSTSSLCSSVQTKSRNFTSYCS------ 57

Query: 1064 VSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSM 885
            V+   +  L++ S  S  + E    +TRLIAQN+PW  + +DIRSLFEKYG V D+E+SM
Sbjct: 58   VTTTQEPILESSSPSSSPEVEDEISKTRLIAQNVPWAATPEDIRSLFEKYGNVVDIEMSM 117

Query: 884  FNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK---PSVTADSVK 714
              K +NRGL F+ MGS          L+S+E +GR +K++++++ KKK   P      V 
Sbjct: 118  HKKERNRGLVFIEMGSPEEAAEALKALESYEYEGRRLKVDYAKAKKKKTYAPREKPSPVP 177

Query: 713  MYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAA 534
             +++FV NLA++  +  L EFF  + GN +  EV++H NPRR +GYGFVSF +K++ EAA
Sbjct: 178  TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAA 237

Query: 533  IANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANNTDEVSSEAE 354
            I  + GK+ MGR IRL  SK+      +E  G +  E+ V+    E P++ T+ V++E E
Sbjct: 238  IIEFQGKDFMGRPIRLARSKQFVKLQAKE--GLQPPEEEVE----EEPSSQTETVTAEEE 291


>ref|XP_010101007.1| 28 kDa ribonucleoprotein [Morus notabilis]
            gi|587898208|gb|EXB86655.1| 28 kDa ribonucleoprotein
            [Morus notabilis]
          Length = 605

 Score =  185 bits (469), Expect = 8e-44
 Identities = 107/239 (44%), Positives = 145/239 (60%), Gaps = 12/239 (5%)
 Frame = -3

Query: 1061 SLAAQQQLQTP----STDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVE 894
            S A +Q L++P    S ++  + E +  + RL AQN+PW C+ +DIR+LFEKYGTV DVE
Sbjct: 378  STAQEQALESPPASESGETGSETEEVL-KNRLYAQNVPWNCTPEDIRALFEKYGTVEDVE 436

Query: 893  LSMFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKK--------KP 738
            LSMFNK +NRGLAFVTMGS          L S+ELDGRVIKI+++R  KK        KP
Sbjct: 437  LSMFNKTRNRGLAFVTMGSPEEALAALNNLQSYELDGRVIKIDYARLRKKKVTTPMQPKP 496

Query: 737  SVTADSVKMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFS 558
             VT      +++FV NL+++  + DL EFF  E  + + AEV++H NPRR  GYGFV+F 
Sbjct: 497  EVT------FNLFVANLSFEARAKDLREFFNSEGHSVVSAEVIFHENPRRSLGYGFVAFK 550

Query: 557  SKEEVEAAIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANN 381
            SK+E EAA++   GK  MGR IR+  S+    +F ++  G   K +      N     N
Sbjct: 551  SKKEAEAALSAVQGKIFMGRPIRVARSR----QFVKQPTGESAKTEDTSTELNTSTDQN 605


>gb|KHF99254.1| 29 kDa ribonucleoprotein B, chloroplastic [Gossypium arboreum]
          Length = 290

 Score =  184 bits (466), Expect = 2e-43
 Identities = 91/195 (46%), Positives = 135/195 (69%), Gaps = 6/195 (3%)
 Frame = -3

Query: 1037 QTPSTDSQQQQEPIPDR----TRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSMFNKFK 870
            Q P+ +++Q++E   +     TRLIAQN+PW+C+ +DIRSLFEKYGTV DVELSM NK +
Sbjct: 67   QDPALEAKQEEEEEEEEAFSNTRLIAQNVPWSCTVEDIRSLFEKYGTVVDVELSMHNKTR 126

Query: 869  NRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK--PSVTADSVKMYDVFV 696
            NRGLAFV+M S          L+S+EL+GR +++ +++  KKK  P      V  +++FV
Sbjct: 127  NRGLAFVSMASPEEALAALNNLESYELEGRTLRLNYAKPKKKKAAPPEKPKPVPAFNLFV 186

Query: 695  GNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAIANYDG 516
             NL+++V +  L EFF  E  N + AEV++H +PR+ +GYGFVSF SK+E +AA++++ G
Sbjct: 187  ANLSYEVRAKHLKEFFSSEGANVVSAEVIFHDSPRKSSGYGFVSFKSKKEADAAMSSFQG 246

Query: 515  KELMGRSIRLHLSKK 471
            K  MGR IR+  S++
Sbjct: 247  KMFMGRPIRVQRSRQ 261


>ref|XP_011012428.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Populus
            euphratica]
          Length = 352

 Score =  182 bits (463), Expect = 4e-43
 Identities = 96/232 (41%), Positives = 144/232 (62%), Gaps = 10/232 (4%)
 Frame = -3

Query: 1064 VSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELSM 885
            V  ++   + T      +++E    +TRL+A N+PW C+A+DIR+LF+K+GTV DVELSM
Sbjct: 121  VDSSSLDDVVTEYQSKAEEKEEEFSKTRLLASNVPWNCTAEDIRALFQKFGTVVDVELSM 180

Query: 884  FNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKKPSVTADSV--KM 711
            ++K +NRGLAFVTMGS          L+S+E +GR +K+ ++++ KKKPS          
Sbjct: 181  YSKTRNRGLAFVTMGSPEEAVAALNNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPT 240

Query: 710  YDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEAAI 531
            +++FV NL ++  S DL EFF  E  N + AE+++H NPRRP+GYGFV+F +K+E + AI
Sbjct: 241  FNLFVANLPFEAKSKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKQEADDAI 300

Query: 530  ANYDGKELMGRSIRLHLSK---KDNARFERESKGNKFKEDSVKV-----NDN 399
            + +  KE MGR +R+  S+   K       +S G   + +S KV     NDN
Sbjct: 301  STFSEKEFMGRQLRIARSRQFVKQRKEDASQSDGTSGELESEKVQADTANDN 352


>ref|XP_010421828.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Camelina sativa]
            gi|727491568|ref|XP_010421829.1| PREDICTED: 30S ribosomal
            protein 2, chloroplastic [Camelina sativa]
          Length = 302

 Score =  182 bits (463), Expect = 4e-43
 Identities = 109/301 (36%), Positives = 168/301 (55%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1244 LRLPCFPSTLFGGNTQQKEVPNLFSWPNPS-QFKPPRTLFFSXXXXXXXXXXXXXXXXLF 1068
            LRLPC    + G  + QK   +  S  N S  +    +L  S                  
Sbjct: 4    LRLPCISLQILGHKSNQKNPNSKVSLSNYSFAWSSSSSLCCSVQAKSRNLTSYFSATTQE 63

Query: 1067 PVSLAAQQQLQTPSTDSQQQQEPIPDRTRLIAQNIPWTCSAQDIRSLFEKYGTVTDVELS 888
            P+ L +   + + S+ S + ++ I  +TRLIAQN+PW  + +DIRSLFEKYG+V D+E+S
Sbjct: 64   PI-LESAATVSSSSSSSVEVEDEI-SKTRLIAQNVPWAATPEDIRSLFEKYGSVVDIEMS 121

Query: 887  MFNKFKNRGLAFVTMGSXXXXXXXXXXLDSHELDGRVIKIEFSRSLKKK---PSVTADSV 717
            M  K +NRGL F+ MGS          L+S+E +GR +K++++++ KKK   P     +V
Sbjct: 122  MHKKERNRGLVFIEMGSPEEAATALKSLESYEYEGRRLKVDYAKAKKKKTYAPREKPSAV 181

Query: 716  KMYDVFVGNLAWKVTSSDLSEFFGVENGNALRAEVVYHTNPRRPAGYGFVSFSSKEEVEA 537
              +++FV NLA++  +  L EFF  + GN +  EV++H NPRR +GYGFVSF +K++ EA
Sbjct: 182  PTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEA 241

Query: 536  AIANYDGKELMGRSIRLHLSKKDNARFERESKGNKFKEDSVKVNDNEGPANNTDEVSSEA 357
            AI  + GK+ MGR IRL  SK+      +E      +E      + E P++ ++ V++E 
Sbjct: 242  AIIEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPEEE------EEEEPSSESETVTAED 295

Query: 356  E 354
            E
Sbjct: 296  E 296


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