BLASTX nr result

ID: Cinnamomum23_contig00004809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00004809
         (435 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002608361.1| ATP synthase F0 subunit 6 [Vitis vinifera] g...    60   6e-07
ref|XP_010660248.1| PREDICTED: ATP synthase subunit a [Vitis vin...    60   6e-07
dbj|BAO50902.1| putative uncharacterized protein (mitochondrion)...    58   2e-06

>ref|YP_002608361.1| ATP synthase F0 subunit 6 [Vitis vinifera]
           gi|209954158|emb|CAQ77596.1| ATP synthase F0 subunit 6
           [Vitis vinifera] gi|239764773|gb|ACS15241.1| ATP
           synthase F0 subunit 6 [Vitis vinifera]
          Length = 388

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 38/147 (25%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
 Frame = -1

Query: 435 PQDIAVAIAMMGLSLTMSILIGINVSRLRGLTRQNFEERMVESAVNTLQAEIGDLLDVLL 256
           P +I   ++ +GL  ++S LI I  + +  L + N+ E++ E    TL+ ++ D  + LL
Sbjct: 3   PTEIGTYVSSLGLCKSISTLIFIRAAWIPDLDQTNYREKISEIGAETLRGQLSDRFEFLL 62

Query: 255 KQSHILRLPPGCRSIRTVAERLF--NESNNLNFLDEIHQSLMTHGVNSPFFGQTLDILNS 82
           K+  +  LP G  +I  V  ++   N++N++  L  I +++  +G++S ++ + LDI++ 
Sbjct: 63  KEKGLQHLPEG-YTIPYVMNQVHNNNKTNDIPTLKGIWENVNIYGLHSQYYQEALDIMDD 121

Query: 81  -WGS*KIMSRSCINR*NLHSIYPVDIG 4
            WG+    + S + + ++  + P++IG
Sbjct: 122 LWGA---RTHSPLEQFSILPLIPMNIG 145


>ref|XP_010660248.1| PREDICTED: ATP synthase subunit a [Vitis vinifera]
           gi|147852553|emb|CAN78514.1| hypothetical protein
           VITISV_017333 [Vitis vinifera]
          Length = 232

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 38/147 (25%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
 Frame = -1

Query: 435 PQDIAVAIAMMGLSLTMSILIGINVSRLRGLTRQNFEERMVESAVNTLQAEIGDLLDVLL 256
           P +I   ++ +GL  ++S LI I  + +  L + N+ E++ E    TL+ ++ D  + LL
Sbjct: 3   PTEIGTYVSSLGLCKSISTLIFIRAAWIPDLDQTNYREKISEIGAETLRGQLSDRFEFLL 62

Query: 255 KQSHILRLPPGCRSIRTVAERLF--NESNNLNFLDEIHQSLMTHGVNSPFFGQTLDILNS 82
           K+  +  LP G  +I  V  ++   N++N++  L  I +++  +G++S ++ + LDI++ 
Sbjct: 63  KEKGLQHLPEG-YTIPYVMNQVHNNNKTNDIPTLKGIWENVNIYGLHSQYYQEALDIMDD 121

Query: 81  -WGS*KIMSRSCINR*NLHSIYPVDIG 4
            WG+    + S + + ++  + P++IG
Sbjct: 122 LWGA---RTHSPLEQFSILPLIPMNIG 145


>dbj|BAO50902.1| putative uncharacterized protein (mitochondrion) [Hevea
           brasiliensis]
          Length = 129

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 32/114 (28%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = -1

Query: 405 MGLSLTMSILIGINVSRLRGLTRQNFEERMVESAVNTLQAEIGDLLDVLLK----QSHIL 238
           + LS ++++L+     + R +   NFEE++ +  + TL+ +I   +++L +     +  +
Sbjct: 12  LALSFSIALLVAFRAGQARDVNAINFEEKVNDLTIATLKEQIVSKIEILFRVYKDTTGDV 71

Query: 237 RLPPGCRSIRTVAERLFNESNNLNFLDEIHQSLMTHGVNSPFFGQTLDILNSWG 76
            LP G    + VAER+F   +N+++L++I+  L+  G  SP F Q LD +  +G
Sbjct: 72  NLPTGVNP-QEVAERVFFSVDNIHWLNQIYLELVNQGTQSPHFAQALDYVLHFG 124


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