BLASTX nr result
ID: Cinnamomum23_contig00004549
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00004549
(1367 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010940712.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 333 1e-88
ref|XP_008789424.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 327 2e-86
ref|XP_010264869.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 325 5e-86
ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 318 6e-84
ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ri... 315 5e-83
ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]... 314 9e-83
ref|XP_010069100.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 313 2e-82
ref|XP_012077603.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 311 6e-82
ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 311 7e-82
emb|CDO99317.1| unnamed protein product [Coffea canephora] 310 1e-81
ref|XP_009401203.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 309 3e-81
ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 309 3e-81
ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citr... 309 3e-81
ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 307 1e-80
ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 307 1e-80
ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus ... 305 4e-80
ref|XP_004296531.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 305 5e-80
gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypiu... 305 7e-80
ref|XP_010549094.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 304 9e-80
ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus ... 303 2e-79
>ref|XP_010940712.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X1 [Elaeis
guineensis]
Length = 282
Score = 333 bits (855), Expect = 1e-88
Identities = 180/288 (62%), Positives = 210/288 (72%), Gaps = 4/288 (1%)
Frame = -2
Query: 1252 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRAL--PVVTTVAYTPHLDSLSISIALP 1085
A AAVGS F+ A S + SSD V R++C R L P +T +A + SI +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDVVLRVTCARPLRMPTITNLA-----EHFSIPVAFQ 57
Query: 1084 KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLYF 905
K RL +I ++V Q + V + NTKLYF
Sbjct: 58 KWRLLRISAAVAQEEATAA---VQEEEEEEEEEKETMEESGKGEEVVVAAPAQQNTKLYF 114
Query: 904 GNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDGS 725
GNLPY+CDSAQLAGIIQ+Y +PE+VEVLYDR+TGRSRGFAFVTMSSIEDC AVI+NLDGS
Sbjct: 115 GNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQNLDGS 174
Query: 724 EYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLY 545
+Y GRT+RVNFSDKPKPKEPLYPE++YKLFVGNLSWSVTSE LT+AFQEYGNVVGARVLY
Sbjct: 175 QYSGRTMRVNFSDKPKPKEPLYPESDYKLFVGNLSWSVTSENLTQAFQEYGNVVGARVLY 234
Query: 544 DGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
DGDTGRSRGYGFVCYST++EMDAA++ LNG ELEGR MRVS+ALGK+S
Sbjct: 235 DGDTGRSRGYGFVCYSTKEEMDAALQYLNGAELEGRAMRVSLALGKKS 282
>ref|XP_008789424.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Phoenix
dactylifera]
Length = 281
Score = 327 bits (837), Expect = 2e-86
Identities = 177/289 (61%), Positives = 208/289 (71%), Gaps = 5/289 (1%)
Frame = -2
Query: 1252 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRA--LPVVTTVAYTPHLDSLSISIALP 1085
A AAVGS F+ A S + SSD V RL+C R +P +T +A + S +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDAVLRLTCARPSRMPTITILA-----EHFSTPVATS 57
Query: 1084 KR-RLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLY 908
++ RL +I ++V E +++ NTKLY
Sbjct: 58 QKWRLLRISAAVAQEEATAEVQEEEAEEEKETMEEGGKEEEVVVATPAPQ-----NTKLY 112
Query: 907 FGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDG 728
FGNLPYNCDSAQLAGIIQ Y +PEMVEVLYDR+TGRSRGFAFVTMSS+EDC AVI+NLDG
Sbjct: 113 FGNLPYNCDSAQLAGIIQQYANPEMVEVLYDRDTGRSRGFAFVTMSSVEDCEAVIQNLDG 172
Query: 727 SEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVL 548
S+Y GRTLRVNFSDKPKPKEPLYPET+YKLFVGNLSWSVTSE LT+ FQ+YGNVVGARVL
Sbjct: 173 SQYSGRTLRVNFSDKPKPKEPLYPETDYKLFVGNLSWSVTSESLTQVFQDYGNVVGARVL 232
Query: 547 YDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
YDGD+GRSRGYGFVCYST++EMDAA++ LNG ELEGR MRVS+ALGK+S
Sbjct: 233 YDGDSGRSRGYGFVCYSTKEEMDAALQYLNGAELEGRAMRVSLALGKKS 281
>ref|XP_010264869.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Nelumbo nucifera]
Length = 291
Score = 325 bits (833), Expect = 5e-86
Identities = 179/291 (61%), Positives = 208/291 (71%), Gaps = 7/291 (2%)
Frame = -2
Query: 1252 AMAAVGSCFTAA-----CIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISIAL 1088
A A VGSCF+ A CIRSK+ +SSD ++S R L V ++++ DSLSI
Sbjct: 5 AAATVGSCFSTATAATSCIRSKY-ASSDFALKISLTRTLQVAP-ISHSLTTDSLSIGAIS 62
Query: 1087 P--KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTK 914
K R+S+I +SV V NTK
Sbjct: 63 QSQKWRISRISASVAQEEAAAAIQTAPETVEEEGDEKGEEQVEQVSTEGEATDPV--NTK 120
Query: 913 LYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENL 734
LYFGNLPY+CDSAQLAGIIQ YGSPEMVEVLY+R+TG+SRGF FVTMS+IED N VIENL
Sbjct: 121 LYFGNLPYSCDSAQLAGIIQQYGSPEMVEVLYNRDTGKSRGFGFVTMSNIEDANRVIENL 180
Query: 733 DGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGAR 554
DGSEY GRTLRVNFSDKP+P+E LYPE+EYKLFVGNLSWSVTSE LT+ FQEYGNVVGAR
Sbjct: 181 DGSEYCGRTLRVNFSDKPRPRESLYPESEYKLFVGNLSWSVTSESLTKVFQEYGNVVGAR 240
Query: 553 VLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
VLYDG+TGRSRGYGFVCYS++ EM+AA+E+LNGVELEGRTMR+S+A GKRS
Sbjct: 241 VLYDGETGRSRGYGFVCYSSEPEMEAALEHLNGVELEGRTMRISLAQGKRS 291
>ref|XP_010650156.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296083731|emb|CBI23720.3| unnamed protein product
[Vitis vinifera]
Length = 283
Score = 318 bits (815), Expect = 6e-84
Identities = 150/175 (85%), Positives = 167/175 (95%)
Frame = -2
Query: 925 LNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAV 746
+NTKLYFGNLPY+CDSAQLAGIIQ+YGSPE+VEVLY+R+TGRSRGFAFVTMSS+EDCNAV
Sbjct: 109 VNTKLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAV 168
Query: 745 IENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNV 566
IENLDGSEYGGRTLRVNFSDKPKPK PLYPETEYKLFVGNLSWSVTSE L + FQEYGNV
Sbjct: 169 IENLDGSEYGGRTLRVNFSDKPKPKLPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNV 228
Query: 565 VGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
+GARVLYDG+TGRSRGYGFVCYST+ EMD A+E+LNGVELEGR +R+S+A G+RS
Sbjct: 229 IGARVLYDGETGRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGRRS 283
>ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 285
Score = 315 bits (807), Expect = 5e-83
Identities = 168/290 (57%), Positives = 204/290 (70%), Gaps = 5/290 (1%)
Frame = -2
Query: 1255 TAMAAVGSCF-----TAACIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISIA 1091
TA AA+ S F T C SKH+ S D++ RL + + + + ++ LS +A
Sbjct: 4 TAAAAISSSFSPSIHTLKCTNSKHLPS-DSLLRLPSAHRVALASIYHRSYAIEPLS-QVA 61
Query: 1090 LPKRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKL 911
+ R ++++ S+ + D +NTKL
Sbjct: 62 VSWRSVARLVSAAVAQEEAAVTAPVEEDEQQQVAEEGEAEPEAEPEAAP------INTKL 115
Query: 910 YFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLD 731
YFGNLPYN DSAQLAGIIQDYG+PE+VEVLYDR+TGRSRGFAFVTMS++EDCNAVIENLD
Sbjct: 116 YFGNLPYNVDSAQLAGIIQDYGTPELVEVLYDRDTGRSRGFAFVTMSTVEDCNAVIENLD 175
Query: 730 GSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARV 551
GS++ GR LRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L EAFQEYGN+VGARV
Sbjct: 176 GSQFMGRILRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARV 235
Query: 550 LYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
LYDG+TGRSRGYGFVCY+T+ EM+ A+ +LNGVELEGR MRVS+A GK+S
Sbjct: 236 LYDGETGRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQGKKS 285
>ref|XP_007035265.1| RNA-binding family protein [Theobroma cacao]
gi|508714294|gb|EOY06191.1| RNA-binding family protein
[Theobroma cacao]
Length = 293
Score = 314 bits (805), Expect = 9e-83
Identities = 170/292 (58%), Positives = 207/292 (70%), Gaps = 7/292 (2%)
Frame = -2
Query: 1255 TAMAAVGSCF-----TAACIRSKHISSSDNVFRLSCLRALPVVTTVAYTPHLDSLSISIA 1091
TA AAVGS F T C+R K +++ +V R R + ++ +T L S ++
Sbjct: 4 TAAAAVGSSFSPSIQTLKCMRFKQLTADHSVLRFPSSRTISSISHSFFTHELFLTSGTVQ 63
Query: 1090 LPKRRLSKIYSSVXXXXXXXXXXETQS--DXXXXXXXXXXXXXXXXXXXXXVNSDVGLNT 917
K R+ K+ ++V E +S + ++ +NT
Sbjct: 64 --KWRVLKVSAAVAQQEAAATAQEEESLAEEEVKEGEVAAEGETEAQAETAAEAESPVNT 121
Query: 916 KLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIEN 737
KLYFGNLPYN DSAQLAGIIQ+YGSPE+VEVLYDR TG+SRGFAFVTMS++EDCN VIEN
Sbjct: 122 KLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYDRETGKSRGFAFVTMSTVEDCNTVIEN 181
Query: 736 LDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGA 557
LDGSEY GRTLRVNFSDKP+P+EPLYPETE+KLFVGNLSWSVTSE LT+AFQEYG VVGA
Sbjct: 182 LDGSEYLGRTLRVNFSDKPRPREPLYPETEHKLFVGNLSWSVTSESLTQAFQEYGTVVGA 241
Query: 556 RVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
RVLYDG+TGRSRGYGFV YST+ EM+AA+++LNGVELEGR +RVS A G+RS
Sbjct: 242 RVLYDGETGRSRGYGFVSYSTKSEMEAALQSLNGVELEGRAIRVSQAQGRRS 293
>ref|XP_010069100.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Eucalyptus
grandis] gi|629091336|gb|KCW57331.1| hypothetical
protein EUGRSUZ_H00128 [Eucalyptus grandis]
Length = 287
Score = 313 bits (802), Expect = 2e-82
Identities = 154/177 (87%), Positives = 166/177 (93%)
Frame = -2
Query: 931 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 752
V +NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR+TGRSRGFAFVTMSSIEDCN
Sbjct: 111 VTVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRDTGRSRGFAFVTMSSIEDCN 170
Query: 751 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 572
AVIENL GSEY GRTLRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE L +AFQEYG
Sbjct: 171 AVIENLAGSEYMGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSESLAKAFQEYG 230
Query: 571 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
NVVGARVLYDG+TGRSRGYGFV YST+ EM+ A+E+LNGVELEGR MRVS+A GKR+
Sbjct: 231 NVVGARVLYDGETGRSRGYGFVSYSTKAEMETAIESLNGVELEGRAMRVSLAEGKRT 287
>ref|XP_012077603.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Jatropha
curcas] gi|643724021|gb|KDP33321.1| hypothetical protein
JCGZ_12870 [Jatropha curcas]
Length = 306
Score = 311 bits (798), Expect = 6e-82
Identities = 149/179 (83%), Positives = 167/179 (93%)
Frame = -2
Query: 937 SDVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIED 758
+++ LNTKLYFGNLPYN DSAQLAGIIQ+YG+PE+VEVLYDR+TGRSRGFAFVTMSS+ED
Sbjct: 128 AEIPLNTKLYFGNLPYNVDSAQLAGIIQEYGAPELVEVLYDRDTGRSRGFAFVTMSSVED 187
Query: 757 CNAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQE 578
CN VIENLDGS+Y GR LRVNF+DKPKPKEPLYPETE+KLFVGNLSWSVTSE LT AFQE
Sbjct: 188 CNRVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEHKLFVGNLSWSVTSESLTRAFQE 247
Query: 577 YGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
YG VVGARVLYDG+TGRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A GK+S
Sbjct: 248 YGTVVGARVLYDGETGRSRGYGFVCYSTRSEMENAIESLNGVELEGRAMRVSLAQGKKS 306
>ref|XP_011091341.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Sesamum
indicum]
Length = 283
Score = 311 bits (797), Expect = 7e-82
Identities = 172/290 (59%), Positives = 203/290 (70%), Gaps = 7/290 (2%)
Frame = -2
Query: 1252 AMAAVGSCFTAACIRSKHISS----SDNVFRLSCLRAL---PVVTTVAYTPHLDSLSISI 1094
A AAV S F+ + K +SS SD++ ++SC R L PV ++ + + ++ S
Sbjct: 3 ATAAVPSSFSTSIKSFKCVSSKNWPSDHLLKISCPRTLQSAPVSHSLVF--EFNPITSS- 59
Query: 1093 ALPKRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTK 914
A RLS++ ++V + +NTK
Sbjct: 60 ACKSWRLSRVSAAVAQEEAAALTAPVEEPPEAEEEVTSGVGGAATESGE-------VNTK 112
Query: 913 LYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENL 734
LYFGNLPY CDSAQLAGIIQ+Y SPE+VEVLYDRNTG+SRGFAFVTMSSIE+C VI+NL
Sbjct: 113 LYFGNLPYLCDSAQLAGIIQEYASPELVEVLYDRNTGKSRGFAFVTMSSIEECKTVIQNL 172
Query: 733 DGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGAR 554
DGSEYGGRTLRVNFSDKPKPKEPLYPETE+KLFVGNLSWSVTSE LTEAFQEYGNVVGAR
Sbjct: 173 DGSEYGGRTLRVNFSDKPKPKEPLYPETEHKLFVGNLSWSVTSENLTEAFQEYGNVVGAR 232
Query: 553 VLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 404
VLYDG+TGRSRGYGFVCY T+ EM+ A+E LNGVEL GR MRVS+A GK+
Sbjct: 233 VLYDGETGRSRGYGFVCYETKAEMETALEALNGVELGGRAMRVSLAQGKK 282
>emb|CDO99317.1| unnamed protein product [Coffea canephora]
Length = 293
Score = 310 bits (795), Expect = 1e-81
Identities = 146/174 (83%), Positives = 161/174 (92%)
Frame = -2
Query: 925 LNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAV 746
+NTKLYFGNLPYN DSAQLAGIIQDY SPE++EVLYDR TG+SRGFAFVTMS++EDCN V
Sbjct: 119 VNTKLYFGNLPYNVDSAQLAGIIQDYASPELIEVLYDRETGKSRGFAFVTMSTVEDCNVV 178
Query: 745 IENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNV 566
I+NLDG EYGGRT RVNFSDKP+PKEPLYPETE+KLFVGNL+WSVTSE LTEAFQEYGNV
Sbjct: 179 IQNLDGREYGGRTFRVNFSDKPRPKEPLYPETEHKLFVGNLAWSVTSESLTEAFQEYGNV 238
Query: 565 VGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 404
VG RVLYDGDTGRSRGYGFVCY T+ EMDAA+ +LNGVELEGR MRVS+A GK+
Sbjct: 239 VGGRVLYDGDTGRSRGYGFVCYETRAEMDAALNSLNGVELEGRPMRVSLAQGKK 292
>ref|XP_009401203.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Musa acuminata
subsp. malaccensis]
Length = 271
Score = 309 bits (792), Expect = 3e-81
Identities = 145/174 (83%), Positives = 164/174 (94%)
Frame = -2
Query: 922 NTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVI 743
NTKLYFGNLPYNCDSAQLAGIIQ++ +PE+VEVLYDR TGRSRGFAFVTMS++EDC VI
Sbjct: 98 NTKLYFGNLPYNCDSAQLAGIIQEFANPELVEVLYDRETGRSRGFAFVTMSTVEDCEEVI 157
Query: 742 ENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVV 563
+NLDGS+YGGRTLRVNFSDKPK KEPLYPE+++KLFVGNLSWSVT+E LT+ FQE+GNVV
Sbjct: 158 KNLDGSQYGGRTLRVNFSDKPKAKEPLYPESQHKLFVGNLSWSVTTESLTQVFQEHGNVV 217
Query: 562 GARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
GARVLYDGDTGRSRGYGFVCYST++EMD AME LNGVELEGR MR+S+ALGK+S
Sbjct: 218 GARVLYDGDTGRSRGYGFVCYSTKEEMDNAMETLNGVELEGREMRISLALGKKS 271
>ref|XP_006489625.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 309
Score = 309 bits (792), Expect = 3e-81
Identities = 148/177 (83%), Positives = 165/177 (93%)
Frame = -2
Query: 931 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 752
+G+NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR TGRSRGFAFVTMS++EDCN
Sbjct: 133 LGVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCN 192
Query: 751 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 572
AVIENLDG EY GR LRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LT+AFQEYG
Sbjct: 193 AVIENLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 252
Query: 571 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
NVVGARVLYDG++GRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A G+RS
Sbjct: 253 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
>ref|XP_006420345.1| hypothetical protein CICLE_v10005487mg [Citrus clementina]
gi|557522218|gb|ESR33585.1| hypothetical protein
CICLE_v10005487mg [Citrus clementina]
Length = 309
Score = 309 bits (792), Expect = 3e-81
Identities = 148/177 (83%), Positives = 165/177 (93%)
Frame = -2
Query: 931 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 752
+G+NTKLYFGNLPYN DSAQLAGIIQDYGSPE+VEVLYDR TGRSRGFAFVTMS++EDCN
Sbjct: 133 LGVNTKLYFGNLPYNVDSAQLAGIIQDYGSPELVEVLYDRETGRSRGFAFVTMSTVEDCN 192
Query: 751 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 572
AVIENLDG EY GR LRVNFSDKPKPK PLY ET++KLFVGNLSWSVT+E LT+AFQEYG
Sbjct: 193 AVIENLDGREYLGRILRVNFSDKPKPKVPLYAETDFKLFVGNLSWSVTTESLTQAFQEYG 252
Query: 571 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
NVVGARVLYDG++GRSRGYGFVCYST+ EM+ A+E+LNGVELEGR MRVS+A G+RS
Sbjct: 253 NVVGARVLYDGESGRSRGYGFVCYSTKAEMETALESLNGVELEGRAMRVSLAQGRRS 309
>ref|XP_011029743.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 279
Score = 307 bits (786), Expect = 1e-80
Identities = 146/177 (82%), Positives = 165/177 (93%)
Frame = -2
Query: 931 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 752
V +NTKLYFGNLPYN DSAQLAG+IQ YGSPEMVEVLY R TG+SRGFAFVTMSSIEDC
Sbjct: 103 VPVNTKLYFGNLPYNVDSAQLAGMIQKYGSPEMVEVLYHRETGKSRGFAFVTMSSIEDCE 162
Query: 751 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 572
AVIENLDGS+Y GR LRVNF+DKPKPKEPLYPETEYKLF+GNLSWSVTSE LT+AFQEYG
Sbjct: 163 AVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYG 222
Query: 571 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
NVVGARVLYDG+TG+SRGYGFVCYST++EM+ A+++LNGVELEGR +RVS+A G++S
Sbjct: 223 NVVGARVLYDGETGKSRGYGFVCYSTKEEMETALQSLNGVELEGRALRVSLAEGRKS 279
>ref|XP_010940713.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic isoform X2 [Elaeis
guineensis]
Length = 269
Score = 307 bits (786), Expect = 1e-80
Identities = 166/270 (61%), Positives = 194/270 (71%), Gaps = 4/270 (1%)
Frame = -2
Query: 1252 AMAAVGSCFTAACIR--SKHISSSDNVFRLSCLRAL--PVVTTVAYTPHLDSLSISIALP 1085
A AAVGS F+ A S + SSD V R++C R L P +T +A + SI +A
Sbjct: 3 ATAAVGSYFSTAATPQLSSKLVSSDVVLRVTCARPLRMPTITNLA-----EHFSIPVAFQ 57
Query: 1084 KRRLSKIYSSVXXXXXXXXXXETQSDXXXXXXXXXXXXXXXXXXXXXVNSDVGLNTKLYF 905
K RL +I ++V Q + V + NTKLYF
Sbjct: 58 KWRLLRISAAVAQEEATAA---VQEEEEEEEEEKETMEESGKGEEVVVAAPAQQNTKLYF 114
Query: 904 GNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIENLDGS 725
GNLPY+CDSAQLAGIIQ+Y +PE+VEVLYDR+TGRSRGFAFVTMSSIEDC AVI+NLDGS
Sbjct: 115 GNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQNLDGS 174
Query: 724 EYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLY 545
+Y GRT+RVNFSDKPKPKEPLYPE++YKLFVGNLSWSVTSE LT+AFQEYGNVVGARVLY
Sbjct: 175 QYSGRTMRVNFSDKPKPKEPLYPESDYKLFVGNLSWSVTSENLTQAFQEYGNVVGARVLY 234
Query: 544 DGDTGRSRGYGFVCYSTQQEMDAAMENLNG 455
DGDTGRSRGYGFVCYST++EMDAA++ LNG
Sbjct: 235 DGDTGRSRGYGFVCYSTKEEMDAALQYLNG 264
Score = 72.0 bits (175), Expect = 1e-09
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = -2
Query: 643 KLFVGNLSWSVTSEGLTEAFQEYGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMEN 464
KL+ GNL +S S L QEY N VLYD DTGRSRG+ FV S+ ++ +A ++N
Sbjct: 111 KLYFGNLPYSCDSAQLAGIIQEYANPELVEVLYDRDTGRSRGFAFVTMSSIEDCEAVIQN 170
Query: 463 LNGVELEGRTMRVS 422
L+G + GRTMRV+
Sbjct: 171 LDGSQYSGRTMRVN 184
>ref|XP_002311696.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus
trichocarpa] gi|222851516|gb|EEE89063.1| RNA-binding
protein RNP1 precursor [Populus trichocarpa]
Length = 279
Score = 305 bits (782), Expect = 4e-80
Identities = 144/177 (81%), Positives = 165/177 (93%)
Frame = -2
Query: 931 VGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCN 752
V +NTKLYFGNLPYN DSAQLAG+IQ+YG+PEMVEVLY R TGRSRGFAFVTMSSIEDC
Sbjct: 103 VPVNTKLYFGNLPYNVDSAQLAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCE 162
Query: 751 AVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYG 572
VIENLDGS+Y GR LRVNF+DKPKPKEPLYPETEYKLF+GNLSWSVTSE LT+AFQEYG
Sbjct: 163 TVIENLDGSQYMGRILRVNFADKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQAFQEYG 222
Query: 571 NVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
NVVGARVLYDG+TG+SRGYGFVCYST++E++ A+++LNGVELEGR +RVS+A G++S
Sbjct: 223 NVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGRKS 279
>ref|XP_004296531.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 297
Score = 305 bits (781), Expect = 5e-80
Identities = 145/178 (81%), Positives = 165/178 (92%)
Frame = -2
Query: 934 DVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDC 755
++ +NTKLYFGNLPY+ DSAQLAGIIQDY SPE++EVLY R+TG+SRGFAFVTMSS+EDC
Sbjct: 120 ELPVNTKLYFGNLPYSVDSAQLAGIIQDYASPELIEVLYHRDTGKSRGFAFVTMSSVEDC 179
Query: 754 NAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEY 575
NAVIENLDG EY GRTLRVNFSDKP+ KEPLYPETEYKLFVGNLSWS TSE LT+AFQEY
Sbjct: 180 NAVIENLDGREYSGRTLRVNFSDKPRAKEPLYPETEYKLFVGNLSWSATSESLTKAFQEY 239
Query: 574 GNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
GNVVGARVLYDG+TGRSRGYGFVC+ST+ EM+ A+++L+GVELEGR MRVS+A GKRS
Sbjct: 240 GNVVGARVLYDGETGRSRGYGFVCFSTKAEMETALQSLDGVELEGRAMRVSLAEGKRS 297
>gb|KHG08630.1| 28 kDa ribonucleoprotein, chloroplastic [Gossypium arboreum]
Length = 292
Score = 305 bits (780), Expect = 7e-80
Identities = 145/174 (83%), Positives = 165/174 (94%)
Frame = -2
Query: 925 LNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAV 746
+NTKLYFGNLPYN DSAQLAGIIQ+YGSPE+VEVLY+R TG+SRGFAFVTMS+IEDCN +
Sbjct: 118 VNTKLYFGNLPYNVDSAQLAGIIQEYGSPELVEVLYNRETGKSRGFAFVTMSTIEDCNTI 177
Query: 745 IENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEYGNV 566
I+NLDGSEY GRTLRVNFSDKP+P+EPLYPETEYKLFVGNLSWSVTSE LT+AFQEYGNV
Sbjct: 178 IQNLDGSEYLGRTLRVNFSDKPRPREPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNV 237
Query: 565 VGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 404
VGARVLYDG+TGRSRGYGFV YST+ EM+AA+++LNGVELEGR +RVS+A G+R
Sbjct: 238 VGARVLYDGETGRSRGYGFVSYSTKSEMEAAIQSLNGVELEGRALRVSLAQGRR 291
Score = 66.6 bits (161), Expect = 4e-08
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = -2
Query: 916 KLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDCNAVIEN 737
KL+ GNL ++ S L Q+YG+ VLYD TGRSRG+ FV+ S+ + A I++
Sbjct: 212 KLFVGNLSWSVTSEILTQAFQEYGNVVGARVLYDGETGRSRGYGFVSYSTKSEMEAAIQS 271
Query: 736 LDGSEYGGRTLRVNFSDKPKP 674
L+G E GR LRV+ + +P
Sbjct: 272 LNGVELEGRALRVSLAQGRRP 292
>ref|XP_010549094.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Tarenaya
hassleriana]
Length = 253
Score = 304 bits (779), Expect = 9e-80
Identities = 144/177 (81%), Positives = 165/177 (93%)
Frame = -2
Query: 934 DVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIEDC 755
D G+NTKLYFGNLPY+ DSA LAG+IQD+ +PE+VEVLY+R TGRSRGFAFVTMSS++DC
Sbjct: 76 DGGVNTKLYFGNLPYSVDSATLAGLIQDFANPELVEVLYNRETGRSRGFAFVTMSSVDDC 135
Query: 754 NAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQEY 575
NAV+ENLDGSEY GRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSE L +AFQ +
Sbjct: 136 NAVVENLDGSEYMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSESLAQAFQGH 195
Query: 574 GNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKR 404
GNVVGARVLYDG+TG+SRGYGFVCYS+Q EM+AA+++LNGVELEGR MRVS+A GK+
Sbjct: 196 GNVVGARVLYDGETGKSRGYGFVCYSSQAEMEAALQSLNGVELEGREMRVSLAQGKK 252
>ref|XP_002314506.1| RNA-binding protein RNP1 precursor [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| RNA-binding protein RNP1
precursor [Populus trichocarpa]
Length = 279
Score = 303 bits (776), Expect = 2e-79
Identities = 146/179 (81%), Positives = 163/179 (91%)
Frame = -2
Query: 937 SDVGLNTKLYFGNLPYNCDSAQLAGIIQDYGSPEMVEVLYDRNTGRSRGFAFVTMSSIED 758
+++ +NTKLYFGNLPYN DSAQLAGIIQ+YGSPEMVEVLY R TGRSRGFAFVTMSSIED
Sbjct: 101 NEIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYHRETGRSRGFAFVTMSSIED 160
Query: 757 CNAVIENLDGSEYGGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLSWSVTSEGLTEAFQE 578
CNAVIENLD S+Y GR LRVNFSD PKPKEPLYPETEYKLFVGNLSWS TSE LT+AFQE
Sbjct: 161 CNAVIENLDESQYMGRILRVNFSDNPKPKEPLYPETEYKLFVGNLSWSATSESLTQAFQE 220
Query: 577 YGNVVGARVLYDGDTGRSRGYGFVCYSTQQEMDAAMENLNGVELEGRTMRVSVALGKRS 401
YGNVVGARVLYDG+TG+SRGYGFVCYST+ EM A+ +L+GVELEGR +RVS+A G++S
Sbjct: 221 YGNVVGARVLYDGETGKSRGYGFVCYSTKAEMQTALVSLDGVELEGRALRVSLAEGRKS 279