BLASTX nr result

ID: Cinnamomum23_contig00004260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00004260
         (214 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010914623.1| PREDICTED: probable pre-mRNA-splicing factor...    80   7e-13
ref|XP_009391988.1| PREDICTED: probable pre-mRNA-splicing factor...    79   1e-12
ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor...    79   1e-12
ref|XP_010931772.1| PREDICTED: probable pre-mRNA-splicing factor...    77   3e-12
ref|XP_010931771.1| PREDICTED: probable pre-mRNA-splicing factor...    77   3e-12
ref|XP_006845501.1| PREDICTED: probable pre-mRNA-splicing factor...    76   1e-11
ref|XP_012075289.1| PREDICTED: probable pre-mRNA-splicing factor...    75   2e-11
gb|KDP35299.1| hypothetical protein JCGZ_09458 [Jatropha curcas]       75   2e-11
ref|XP_009116902.1| PREDICTED: probable pre-mRNA-splicing factor...    74   3e-11
emb|CDX76626.1| BnaC08g32120D [Brassica napus]                         74   3e-11
emb|CDY11413.1| BnaA09g39790D [Brassica napus]                         74   3e-11
gb|KFK35416.1| hypothetical protein AALP_AA5G281500 [Arabis alpina]    74   4e-11
gb|KFK35415.1| hypothetical protein AALP_AA5G281500 [Arabis alpina]    74   4e-11
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu...    74   4e-11
ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutr...    74   4e-11
ref|XP_009133805.1| PREDICTED: probable pre-mRNA-splicing factor...    74   5e-11
emb|CDX95715.1| BnaC03g25960D [Brassica napus]                         74   5e-11
ref|XP_009611106.1| PREDICTED: probable pre-mRNA-splicing factor...    73   6e-11
ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor...    73   6e-11
ref|XP_004229376.1| PREDICTED: probable pre-mRNA-splicing factor...    73   6e-11

>ref|XP_010914623.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Elaeis guineensis]
          Length = 730

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQRN 90
           LIDIAPHYYDL NFP+CEAKRVLERLYNKRE+EKGE+K RN
Sbjct: 687 LIDIAPHYYDLSNFPSCEAKRVLERLYNKREKEKGESKVRN 727


>ref|XP_009391988.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Musa acuminata subsp. malaccensis]
          Length = 726

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQRN 90
           LIDIAPHYYDL NFP+CEAKRVLERLYNKR++EKGE+K RN
Sbjct: 683 LIDIAPHYYDLSNFPSCEAKRVLERLYNKRDKEKGESKTRN 723


>ref|XP_008801724.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Phoenix dactylifera]
          Length = 730

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 35/41 (85%), Positives = 39/41 (95%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQRN 90
           LIDI+PHYYDL NFP+CEAKRVLERLYNKRE+EKGE+K RN
Sbjct: 687 LIDISPHYYDLSNFPSCEAKRVLERLYNKREKEKGESKARN 727


>ref|XP_010931772.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase isoform X2 [Elaeis guineensis]
          Length = 687

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQRN 90
           LID+APHYYDL NFP+CEAKRVLERLY KRE+EKGE+K RN
Sbjct: 644 LIDVAPHYYDLSNFPSCEAKRVLERLYKKREKEKGESKTRN 684


>ref|XP_010931771.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase isoform X1 [Elaeis guineensis]
          Length = 729

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQRN 90
           LID+APHYYDL NFP+CEAKRVLERLY KRE+EKGE+K RN
Sbjct: 686 LIDVAPHYYDLSNFPSCEAKRVLERLYKKREKEKGESKTRN 726


>ref|XP_006845501.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Amborella trichopoda]
           gi|548848073|gb|ERN07176.1| hypothetical protein
           AMTR_s00019p00154740 [Amborella trichopoda]
          Length = 714

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           LIDIAPHYYDL NFPNCEAKRVLERLY KRER++GE+K R
Sbjct: 674 LIDIAPHYYDLSNFPNCEAKRVLERLYQKRERDRGESKGR 713


>ref|XP_012075289.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Jatropha curcas]
          Length = 733

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLERLY KREREK E+K +
Sbjct: 693 LVDVAPHYYDLANFPNCEAKRVLERLYKKREREKEESKNK 732


>gb|KDP35299.1| hypothetical protein JCGZ_09458 [Jatropha curcas]
          Length = 553

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLERLY KREREK E+K +
Sbjct: 513 LVDVAPHYYDLANFPNCEAKRVLERLYKKREREKEESKNK 552


>ref|XP_009116902.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Brassica rapa]
          Length = 718

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KREREK ++K R
Sbjct: 678 LVDVAPHYYDLTNFPNCEAKRVLEKLYKKREREKADSKNR 717


>emb|CDX76626.1| BnaC08g32120D [Brassica napus]
          Length = 718

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KREREK ++K R
Sbjct: 678 LVDVAPHYYDLTNFPNCEAKRVLEKLYKKREREKADSKNR 717


>emb|CDY11413.1| BnaA09g39790D [Brassica napus]
          Length = 718

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KREREK ++K R
Sbjct: 678 LVDVAPHYYDLTNFPNCEAKRVLEKLYKKREREKADSKNR 717


>gb|KFK35416.1| hypothetical protein AALP_AA5G281500 [Arabis alpina]
          Length = 721

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KRE+EK E+K R
Sbjct: 681 LVDVAPHYYDLTNFPNCEAKRVLEKLYKKREKEKDESKNR 720


>gb|KFK35415.1| hypothetical protein AALP_AA5G281500 [Arabis alpina]
          Length = 764

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KRE+EK E+K R
Sbjct: 724 LVDVAPHYYDLTNFPNCEAKRVLEKLYKKREKEKDESKNR 763


>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 731

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 33/40 (82%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+DIAPHYYDL NFPNCEAKRVLE+LY KREREK E+K R
Sbjct: 691 LVDIAPHYYDLDNFPNCEAKRVLEKLYKKREREKEESKNR 730


>ref|XP_006402386.1| hypothetical protein EUTSA_v10005810mg [Eutrema salsugineum]
           gi|557103485|gb|ESQ43839.1| hypothetical protein
           EUTSA_v10005810mg [Eutrema salsugineum]
          Length = 723

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KREREK E+K R
Sbjct: 683 LVDVAPHYYDLSNFPNCEAKRVLEKLYKKREREKEESKNR 722


>ref|XP_009133805.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Brassica rapa] gi|674950148|emb|CDX83337.1|
           BnaA03g21690D [Brassica napus]
          Length = 723

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KRERE+ E+K R
Sbjct: 683 LVDVAPHYYDLSNFPNCEAKRVLEKLYKKRERERNESKNR 722


>emb|CDX95715.1| BnaC03g25960D [Brassica napus]
          Length = 725

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 31/40 (77%), Positives = 36/40 (90%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+D+APHYYDL NFPNCEAKRVLE+LY KRERE+ E+K R
Sbjct: 685 LVDVAPHYYDLSNFPNCEAKRVLEKLYKKRERERNESKSR 724


>ref|XP_009611106.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Nicotiana tomentosiformis]
          Length = 722

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+DIAPHYYDL NFP CEAKRVLERLY KREREK E+K +
Sbjct: 682 LVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESKSK 721


>ref|XP_006349171.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Solanum tuberosum]
          Length = 723

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+DIAPHYYDL NFP CEAKRVLERLY KREREK E+K +
Sbjct: 683 LVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESKSK 722


>ref|XP_004229376.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Solanum lycopersicum]
          Length = 723

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -3

Query: 212 LIDIAPHYYDLVNFPNCEAKRVLERLYNKREREKGENKQR 93
           L+DIAPHYYDL NFP CEAKRVLERLY KREREK E+K +
Sbjct: 683 LVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESKSK 722


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