BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00004088
         (4531 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II tra...   560   e-156
ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II tra...   560   e-156
ref|XP_008812740.1| PREDICTED: mediator of RNA polymerase II tra...   539   e-150
ref|XP_010936107.1| PREDICTED: mediator of RNA polymerase II tra...   537   e-149
ref|XP_010936106.1| PREDICTED: mediator of RNA polymerase II tra...   537   e-149
ref|XP_010936105.1| PREDICTED: mediator of RNA polymerase II tra...   537   e-149
ref|XP_010936104.1| PREDICTED: mediator of RNA polymerase II tra...   537   e-149
ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II tra...   535   e-148
gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sin...   535   e-148
ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citr...   534   e-148
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  533   e-148
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   530   e-147
ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II tra...   518   e-143
ref|XP_007023331.1| Uncharacterized protein TCM_027312 [Theobrom...   516   e-143
ref|XP_012073105.1| PREDICTED: mediator of RNA polymerase II tra...   513   e-142
gb|KDP37023.1| hypothetical protein JCGZ_06079 [Jatropha curcas]      513   e-142
ref|XP_010097158.1| hypothetical protein L484_025703 [Morus nota...   511   e-141
ref|XP_008218603.1| PREDICTED: mediator of RNA polymerase II tra...   511   e-141
ref|XP_011461616.1| PREDICTED: mediator of RNA polymerase II tra...   510   e-141
ref|XP_011461615.1| PREDICTED: mediator of RNA polymerase II tra...   510   e-141

>ref|XP_010245153.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Nelumbo nucifera]
          Length = 1386

 Score =  560 bits (1444), Expect = e-156
 Identities = 307/464 (66%), Positives = 341/464 (73%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++E+ND KVR G GVKPG+F Q H    RP  YHQQLK  A F ISSPQLLQA SPQ+SQ
Sbjct: 923  MNEVNDLKVRQGMGVKPGIFQQHHSASQRPA-YHQQLKAGASFPISSPQLLQAASPQISQ 981

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQIDQQ+LLS+L+K GTPL                    IPGDSEKQ  A+SS+S A
Sbjct: 982  HSSPQIDQQSLLSSLTKAGTPLQSANSPFVVPSPSPPLAPSPIPGDSEKQTSAVSSLSTA 1041

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGH QT+  +  AQSLAI TPGISASPLLAE +  DGNQGTA T ISGK    E+PLE
Sbjct: 1042 GNIGHPQTSVAIAPAQSLAIGTPGISASPLLAEFTGPDGNQGTASTMISGKSVVTEQPLE 1101

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIK V+S+S KA             MIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1102 RLIKVVKSMSTKALCASVSDIGSVVCMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1161

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F+S DGS+ATKKMRR+T AMPLNAVSS GSVNDSFKQL             SRIKR ++E
Sbjct: 1162 FISQDGSSATKKMRRYTIAMPLNAVSSAGSVNDSFKQLNGLETSDLESTATSRIKRPRVE 1221

Query: 890  TNHTLLEEVREINHRLIDTVV---XXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKS 720
             NH LLEE+RE N RLIDTVV                    GT+VKCSF+AVALSPNLKS
Sbjct: 1222 ANHALLEEIRETNQRLIDTVVDISDEDIDPTTGAAVVEGGEGTIVKCSFSAVALSPNLKS 1281

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPILP+RLLVP+NYP CSPILLD+LP+E SKE EDLSVKAK  F+  LR L Q
Sbjct: 1282 QYASAQMSPILPIRLLVPTNYPKCSPILLDRLPVELSKEYEDLSVKAKSRFSASLRSLSQ 1341

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SL EMA+TWD+CAR V++EYAQQSGGGSFSSRYGTWENCVSA
Sbjct: 1342 PMSLWEMAKTWDICARAVVSEYAQQSGGGSFSSRYGTWENCVSA 1385



 Score =  232 bits (591), Expect = 2e-57
 Identities = 140/314 (44%), Positives = 190/314 (60%), Gaps = 24/314 (7%)
 Frame = -3

Query: 2900 RIQPSGALLQPQRA-------------LPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKS 2760
            R+Q SGALLQPQ A             LPEASSTS++STAQTGH   +D QEEVYQKIKS
Sbjct: 537  RLQTSGALLQPQNAIEQQKQLFQSQRMLPEASSTSIESTAQTGHANAIDLQEEVYQKIKS 596

Query: 2759 MKEMYLPELTELYQKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNI 2580
            MKEMYLPE+ E+YQKIA+KCQQ+D+ + QP++SD +++L++F++MLER+I FL V K+  
Sbjct: 597  MKEMYLPEINEMYQKIALKCQQNDS-LPQPQKSDHVDRLRMFRTMLERIIQFLSVAKTTC 655

Query: 2579 SPTYKDKLAQYEKQIIGVLTSNRHKKPA---------XXXXXXXXXXXXXXXXXXXXXXX 2427
               YKDKL   EKQI+GVL +NR KKP                                 
Sbjct: 656  L-LYKDKLPLLEKQIVGVLNTNRPKKPVPSQLQGQQQLQPPGALLHSIQPQQQQQQQQPQ 714

Query: 2426 XXXXXXXXXQHENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSM-PLPTHMGVXXXXXXX 2253
                     QH+N ++  +QP+N+Q SVTSMQ T+V   QH S+ P+  H+ V       
Sbjct: 715  PQIPHLKQQQHDNQMHPQVQPINLQSSVTSMQPTSVPTMQHSSIPPVSNHLAVTNAQPNV 774

Query: 2252 XXXXXXNSNLDSGPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQ 2073
                  +SNL+ G G++ NSL QG VGS        LQQ+T++ +QQTN++ LSQ+++N 
Sbjct: 775  MTSLQSSSNLEPGQGNAPNSLQQGAVGS--------LQQSTMSTTQQTNITTLSQSSVNT 826

Query: 2072 SQPNVSSLQTTSNI 2031
             QP++ SLQ  +N+
Sbjct: 827  LQPSIGSLQPNTNM 840



 Score =  206 bits (523), Expect = 2e-49
 Identities = 118/192 (61%), Positives = 132/192 (68%), Gaps = 8/192 (4%)
 Frame = -3

Query: 4529 NWRPPQGEP------TMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKI 4368
            NWRP QGEP      TMD  DWR+QL P+SR RIVNKIM+TLK+HLPISGPEGL EL+KI
Sbjct: 5    NWRPTQGEPAMPSMPTMDNSDWRSQLQPDSRQRIVNKIMDTLKKHLPISGPEGLQELKKI 64

Query: 4367 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQGG-ASNSLPS-ITGGNQNPPDPASQS 4194
            AVRFEEKIYTAA+SQSDYLRKISLKMLTME+KSQ     NSLPS   G N NP DPASQS
Sbjct: 65   AVRFEEKIYTAASSQSDYLRKISLKMLTMESKSQPNVVPNSLPSNSAGSNPNPVDPASQS 124

Query: 4193 LQQQVRNPGQPLPISLSNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTT 4014
            +Q QVRN GQPLPIS+ NQ+  RQQ+L                        SV+GL+Q T
Sbjct: 125  MQSQVRNQGQPLPISMPNQA--RQQMLSQTVQNNIAPAGVQNSSGLSSAHPSVSGLSQNT 182

Query: 4013 MSNVVGQNSNLQ 3978
            + N   Q   LQ
Sbjct: 183  VPNRQMQGRQLQ 194


>ref|XP_010245151.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Nelumbo nucifera]
            gi|720090613|ref|XP_010245152.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 15a isoform X1
            [Nelumbo nucifera]
          Length = 1422

 Score =  560 bits (1444), Expect = e-156
 Identities = 307/464 (66%), Positives = 341/464 (73%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++E+ND KVR G GVKPG+F Q H    RP  YHQQLK  A F ISSPQLLQA SPQ+SQ
Sbjct: 959  MNEVNDLKVRQGMGVKPGIFQQHHSASQRPA-YHQQLKAGASFPISSPQLLQAASPQISQ 1017

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQIDQQ+LLS+L+K GTPL                    IPGDSEKQ  A+SS+S A
Sbjct: 1018 HSSPQIDQQSLLSSLTKAGTPLQSANSPFVVPSPSPPLAPSPIPGDSEKQTSAVSSLSTA 1077

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGH QT+  +  AQSLAI TPGISASPLLAE +  DGNQGTA T ISGK    E+PLE
Sbjct: 1078 GNIGHPQTSVAIAPAQSLAIGTPGISASPLLAEFTGPDGNQGTASTMISGKSVVTEQPLE 1137

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIK V+S+S KA             MIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1138 RLIKVVKSMSTKALCASVSDIGSVVCMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1197

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F+S DGS+ATKKMRR+T AMPLNAVSS GSVNDSFKQL             SRIKR ++E
Sbjct: 1198 FISQDGSSATKKMRRYTIAMPLNAVSSAGSVNDSFKQLNGLETSDLESTATSRIKRPRVE 1257

Query: 890  TNHTLLEEVREINHRLIDTVV---XXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKS 720
             NH LLEE+RE N RLIDTVV                    GT+VKCSF+AVALSPNLKS
Sbjct: 1258 ANHALLEEIRETNQRLIDTVVDISDEDIDPTTGAAVVEGGEGTIVKCSFSAVALSPNLKS 1317

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPILP+RLLVP+NYP CSPILLD+LP+E SKE EDLSVKAK  F+  LR L Q
Sbjct: 1318 QYASAQMSPILPIRLLVPTNYPKCSPILLDRLPVELSKEYEDLSVKAKSRFSASLRSLSQ 1377

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SL EMA+TWD+CAR V++EYAQQSGGGSFSSRYGTWENCVSA
Sbjct: 1378 PMSLWEMAKTWDICARAVVSEYAQQSGGGSFSSRYGTWENCVSA 1421



 Score =  247 bits (630), Expect = 7e-62
 Identities = 139/218 (63%), Positives = 155/218 (71%), Gaps = 8/218 (3%)
 Frame = -3

Query: 4529 NWRPPQGEP------TMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKI 4368
            NWRP QGEP      TMD  DWR+QL P+SR RIVNKIM+TLK+HLPISGPEGL EL+KI
Sbjct: 5    NWRPTQGEPAMPSMPTMDNSDWRSQLQPDSRQRIVNKIMDTLKKHLPISGPEGLQELKKI 64

Query: 4367 AVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQGG-ASNSLPS-ITGGNQNPPDPASQS 4194
            AVRFEEKIYTAA+SQSDYLRKISLKMLTME+KSQ     NSLPS   G N NP DPASQS
Sbjct: 65   AVRFEEKIYTAASSQSDYLRKISLKMLTMESKSQPNVVPNSLPSNSAGSNPNPVDPASQS 124

Query: 4193 LQQQVRNPGQPLPISLSNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTT 4014
            +Q QVRN GQPLPIS+ NQ+  RQQ+L                        SV+GL+Q T
Sbjct: 125  MQSQVRNQGQPLPISMPNQA--RQQMLSQTVQNNIAPAGVQNSSGLSSAHPSVSGLSQNT 182

Query: 4013 MSNVVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            + NV GQNSNL  M GIS NSV+N +GQ V SNMF NS
Sbjct: 183  VPNVGGQNSNLPNMSGISQNSVSNPLGQSVTSNMFANS 220



 Score =  232 bits (591), Expect = 2e-57
 Identities = 140/314 (44%), Positives = 190/314 (60%), Gaps = 24/314 (7%)
 Frame = -3

Query: 2900 RIQPSGALLQPQRA-------------LPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKS 2760
            R+Q SGALLQPQ A             LPEASSTS++STAQTGH   +D QEEVYQKIKS
Sbjct: 573  RLQTSGALLQPQNAIEQQKQLFQSQRMLPEASSTSIESTAQTGHANAIDLQEEVYQKIKS 632

Query: 2759 MKEMYLPELTELYQKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNI 2580
            MKEMYLPE+ E+YQKIA+KCQQ+D+ + QP++SD +++L++F++MLER+I FL V K+  
Sbjct: 633  MKEMYLPEINEMYQKIALKCQQNDS-LPQPQKSDHVDRLRMFRTMLERIIQFLSVAKTTC 691

Query: 2579 SPTYKDKLAQYEKQIIGVLTSNRHKKPA---------XXXXXXXXXXXXXXXXXXXXXXX 2427
               YKDKL   EKQI+GVL +NR KKP                                 
Sbjct: 692  L-LYKDKLPLLEKQIVGVLNTNRPKKPVPSQLQGQQQLQPPGALLHSIQPQQQQQQQQPQ 750

Query: 2426 XXXXXXXXXQHENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSM-PLPTHMGVXXXXXXX 2253
                     QH+N ++  +QP+N+Q SVTSMQ T+V   QH S+ P+  H+ V       
Sbjct: 751  PQIPHLKQQQHDNQMHPQVQPINLQSSVTSMQPTSVPTMQHSSIPPVSNHLAVTNAQPNV 810

Query: 2252 XXXXXXNSNLDSGPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQ 2073
                  +SNL+ G G++ NSL QG VGS        LQQ+T++ +QQTN++ LSQ+++N 
Sbjct: 811  MTSLQSSSNLEPGQGNAPNSLQQGAVGS--------LQQSTMSTTQQTNITTLSQSSVNT 862

Query: 2072 SQPNVSSLQTTSNI 2031
             QP++ SLQ  +N+
Sbjct: 863  LQPSIGSLQPNTNM 876


>ref|XP_008812740.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Phoenix dactylifera]
          Length = 1381

 Score =  539 bits (1389), Expect = e-150
 Identities = 294/459 (64%), Positives = 332/459 (72%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1781 SEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQH 1602
            +E N+ KVRPG G+KPGL+ Q    G RP  YHQ LK  A F ISSPQ LQ++SPQ+S H
Sbjct: 925  NEPNESKVRPGLGIKPGLYQQHFSAGQRPGYYHQ-LKQGASFPISSPQNLQSSSPQISHH 983

Query: 1601 SSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSVIPGDSEKQAPAISSISNAGN 1422
            SSPQ+DQ NLL++  K GTPL                 S IP DSEK +  +SS++NA +
Sbjct: 984  SSPQVDQHNLLASQVKAGTPLQSANSPFVPSPSTPLAPSPIPADSEKLS-GLSSVTNAAH 1042

Query: 1421 IGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLERL 1245
            +GHQQ+A    Q QSLA+ TPGISASP LAE +S DGNQ T P+ + GK SA ERPLERL
Sbjct: 1043 VGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQATVPSVVPGKTSASERPLERL 1102

Query: 1244 IKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1065
            IK V+S +PKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM
Sbjct: 1103 IKVVKSSTPKALSSAVSDIESVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1162

Query: 1064 SHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIETN 885
            S DGSA TKKM+R+TSAMPLN VSS GSVNDSFKQ              SR+KR K E N
Sbjct: 1163 SQDGSATTKKMKRNTSAMPLNNVSSAGSVNDSFKQSYGLDASELESTATSRVKRQKFEVN 1222

Query: 884  HTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYASP 705
            H LLEE+REIN +LIDTVV                 GTV+KCSF AVALSP+LKSQ+AS 
Sbjct: 1223 HALLEEIREINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFASS 1282

Query: 704  QMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPISLG 525
            Q+SPILPLRLLVP+NYP CSP+LLDKLP E S ES+DLSVKAK  F+I LRGL QP+SLG
Sbjct: 1283 QISPILPLRLLVPANYPKCSPVLLDKLPDESSGESDDLSVKAKSRFSISLRGLSQPMSLG 1342

Query: 524  EMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            EMARTWD CARKVIAEYAQQ+GGGSFSSRYG WENCV A
Sbjct: 1343 EMARTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1381



 Score =  248 bits (632), Expect = 4e-62
 Identities = 140/289 (48%), Positives = 177/289 (61%), Gaps = 1/289 (0%)
 Frame = -3

Query: 2897 IQPSGALLQPQRALPE-ASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELY 2721
            I+     +Q QR LPE +SSTS+DSTAQTGHVGV D QEE+YQKIKSM++MY  ++ ELY
Sbjct: 560  IEQQKQFIQAQRVLPEVSSSTSVDSTAQTGHVGVADLQEEIYQKIKSMRDMYFADINELY 619

Query: 2720 QKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEK 2541
            Q+IA+K QQHD  +   K S+  EK+K FK+MLER + FLQ+ K+NI P  KD++  YEK
Sbjct: 620  QRIALKFQQHDGFIPPAKPSEQYEKMKNFKTMLERTLAFLQISKNNIQPGLKDRIPLYEK 679

Query: 2540 QIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNSMQPMN 2361
            QI+ +LTSN+ KK                                  QH+N  N +Q MN
Sbjct: 680  QIVNILTSNK-KKVIPSQSQGQQQFQHPGGLAHSMPQQQPSLVPQLQQHDNHPNQVQQMN 738

Query: 2360 MQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQG 2181
            +QGS TSMQ +AVT  QH SMPL T+ GV              +NLDS  G S NSL QG
Sbjct: 739  LQGSATSMQPSAVTGMQHVSMPLTTNFGVPATQQNITNALQPAANLDSVQGSSFNSLQQG 798

Query: 2180 VVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSN 2034
             +GS+ Q GVG +  NTINA QQTN + LS ++MN  QPN S +Q +SN
Sbjct: 799  AMGSMPQGGVGSV-PNTINAPQQTNANTLSNSSMNTLQPNASLVQPSSN 846



 Score =  189 bits (479), Expect = 2e-44
 Identities = 117/218 (53%), Positives = 137/218 (62%), Gaps = 8/218 (3%)
 Frame = -3

Query: 4529 NWRPPQGEPTM--------DGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELR 4374
            +WRP QGEP+           GDWR QL  ++R RIVNKIM+TLKRHLPIS PEGL EL+
Sbjct: 5    SWRPGQGEPSTADATAGDATAGDWRCQLQHDARQRIVNKIMDTLKRHLPISVPEGLNELQ 64

Query: 4373 KIAVRFEEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQNPPDPASQS 4194
            KIAVRFEEKIYTAATSQSDYLRKISLKML+METK+Q   +  +P+ T  NQNP D     
Sbjct: 65   KIAVRFEEKIYTAATSQSDYLRKISLKMLSMETKTQ--HTPPMPNTTIPNQNPTD----- 117

Query: 4193 LQQQVRNPGQPLPISLSNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTT 4014
                    GQPL I   N    RQQLLP                       S TGL+Q+ 
Sbjct: 118  -------SGQPLGIPAVNPPTARQQLLP-QNLQNNTSTSVQSSANLPPALSSFTGLSQSN 169

Query: 4013 MSNVVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            +S+ VGQ SNLQ MPGIS NSV+NSVGQG   +++ N+
Sbjct: 170  ISS-VGQTSNLQNMPGISQNSVSNSVGQGAAPDIYANA 206


>ref|XP_010936107.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X4 [Elaeis guineensis]
          Length = 1365

 Score =  537 bits (1384), Expect = e-149
 Identities = 289/459 (62%), Positives = 332/459 (72%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1781 SEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQH 1602
            +E+N+ KVRPG G+K GL+ Q +  G RP  YHQ LKP A F ISSPQ LQ++SPQ+S H
Sbjct: 908  NEVNESKVRPGLGIKAGLYQQHYPAGQRPGYYHQ-LKPGASFPISSPQNLQSSSPQISHH 966

Query: 1601 SSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSVIPGDSEKQAPAISSISNAGN 1422
            SSPQ+DQ NLL +  K GTPL                 S IP DSEKQ   +SS++NAG+
Sbjct: 967  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPADSEKQLSGLSSLTNAGH 1026

Query: 1421 IGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLERL 1245
            +GHQQ+A    Q QSLA+ TPGISASP LAE +S DGNQ   P+ + GK +A ERPLERL
Sbjct: 1027 VGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLERL 1086

Query: 1244 IKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1065
            IK V+S +PKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM
Sbjct: 1087 IKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1146

Query: 1064 SHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIETN 885
            S DGSA TKK++R+TSAMPLN VSS GSVN+SFKQ              S +KR KIE N
Sbjct: 1147 SQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEVN 1206

Query: 884  HTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYASP 705
            H LLEE+ EIN +LIDTVV                 GTV+KCSF AVALSP+LKSQ+AS 
Sbjct: 1207 HALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFASS 1266

Query: 704  QMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPISLG 525
            Q+SPILPLRLLVP+NYP CSP+LLDKLP E S E++DLSVKAK  F+I LRGL QP+SLG
Sbjct: 1267 QISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSLG 1326

Query: 524  EMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            EMA+TWD CARKVIAEYAQQ+GGGSFSSRYG WENCV A
Sbjct: 1327 EMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1365



 Score =  223 bits (569), Expect = 9e-55
 Identities = 132/289 (45%), Positives = 168/289 (58%), Gaps = 1/289 (0%)
 Frame = -3

Query: 2897 IQPSGALLQPQRALPEASS-TSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELY 2721
            I+     +Q QR L + SS TS+DS AQTG  GV D QEE+YQKIKS +EMY  +L E Y
Sbjct: 545  IEQQKHFIQAQRVLRDVSSNTSVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFY 604

Query: 2720 QKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEK 2541
            QK+A+K QQHDA++   K S+  EK+K FK+MLER +  LQ+ K+NI P  K+KL  YE+
Sbjct: 605  QKVALKLQQHDALIPPAKPSEQYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYER 664

Query: 2540 QIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNSMQPMN 2361
            QI  VL S + KK                                  QH+N  N +Q MN
Sbjct: 665  QIHNVLASTK-KKGIPSQSQGQQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMN 723

Query: 2360 MQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQG 2181
            +Q S TSMQ +AVT  QH SMPLPT+ GV              +NLDS  G S NSL QG
Sbjct: 724  LQVSATSMQPSAVTGMQHVSMPLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQG 783

Query: 2180 VVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSN 2034
             +GS+QQ GVG +  +T+NA QQTN + LS ++MN  Q N S +Q +SN
Sbjct: 784  AMGSMQQVGVGSV-PSTVNAPQQTNANTLSNSSMNTLQSNASLVQPSSN 831



 Score = 93.2 bits (230), Expect = 2e-15
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
 Frame = -3

Query: 4319 DYLRKISLKMLTMETKSQGGA--SNSLPSITGGNQNPPDPASQSLQQQVRNPGQPLPISL 4146
            DYLRKISLKML++ETK+Q     ++S+P+ T  NQNP D        QV N GQ L I +
Sbjct: 70   DYLRKISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD--------QVGNQGQSLAIPM 121

Query: 4145 SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVVGQNSNLQPMPG 3966
             N    RQQLLP                        + GL Q+ +S+V GQ SNLQ MPG
Sbjct: 122  VNPFPARQQLLPQNLQNNTSTAVQSSANLPSALSS-IAGLGQSNISSV-GQTSNLQNMPG 179

Query: 3965 ISHNSVNNSVGQGVQSNMFPN 3903
            IS NSV+NSVGQG   +++ N
Sbjct: 180  ISQNSVSNSVGQGAAPDIYAN 200


>ref|XP_010936106.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X3 [Elaeis guineensis]
          Length = 1367

 Score =  537 bits (1384), Expect = e-149
 Identities = 289/459 (62%), Positives = 332/459 (72%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1781 SEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQH 1602
            +E+N+ KVRPG G+K GL+ Q +  G RP  YHQ LKP A F ISSPQ LQ++SPQ+S H
Sbjct: 910  NEVNESKVRPGLGIKAGLYQQHYPAGQRPGYYHQ-LKPGASFPISSPQNLQSSSPQISHH 968

Query: 1601 SSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSVIPGDSEKQAPAISSISNAGN 1422
            SSPQ+DQ NLL +  K GTPL                 S IP DSEKQ   +SS++NAG+
Sbjct: 969  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPADSEKQLSGLSSLTNAGH 1028

Query: 1421 IGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLERL 1245
            +GHQQ+A    Q QSLA+ TPGISASP LAE +S DGNQ   P+ + GK +A ERPLERL
Sbjct: 1029 VGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLERL 1088

Query: 1244 IKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1065
            IK V+S +PKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM
Sbjct: 1089 IKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1148

Query: 1064 SHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIETN 885
            S DGSA TKK++R+TSAMPLN VSS GSVN+SFKQ              S +KR KIE N
Sbjct: 1149 SQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEVN 1208

Query: 884  HTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYASP 705
            H LLEE+ EIN +LIDTVV                 GTV+KCSF AVALSP+LKSQ+AS 
Sbjct: 1209 HALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFASS 1268

Query: 704  QMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPISLG 525
            Q+SPILPLRLLVP+NYP CSP+LLDKLP E S E++DLSVKAK  F+I LRGL QP+SLG
Sbjct: 1269 QISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSLG 1328

Query: 524  EMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            EMA+TWD CARKVIAEYAQQ+GGGSFSSRYG WENCV A
Sbjct: 1329 EMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1367



 Score =  223 bits (569), Expect = 9e-55
 Identities = 132/289 (45%), Positives = 168/289 (58%), Gaps = 1/289 (0%)
 Frame = -3

Query: 2897 IQPSGALLQPQRALPEASS-TSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELY 2721
            I+     +Q QR L + SS TS+DS AQTG  GV D QEE+YQKIKS +EMY  +L E Y
Sbjct: 547  IEQQKHFIQAQRVLRDVSSNTSVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFY 606

Query: 2720 QKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEK 2541
            QK+A+K QQHDA++   K S+  EK+K FK+MLER +  LQ+ K+NI P  K+KL  YE+
Sbjct: 607  QKVALKLQQHDALIPPAKPSEQYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYER 666

Query: 2540 QIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNSMQPMN 2361
            QI  VL S + KK                                  QH+N  N +Q MN
Sbjct: 667  QIHNVLASTK-KKGIPSQSQGQQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMN 725

Query: 2360 MQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQG 2181
            +Q S TSMQ +AVT  QH SMPLPT+ GV              +NLDS  G S NSL QG
Sbjct: 726  LQVSATSMQPSAVTGMQHVSMPLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQG 785

Query: 2180 VVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSN 2034
             +GS+QQ GVG +  +T+NA QQTN + LS ++MN  Q N S +Q +SN
Sbjct: 786  AMGSMQQVGVGSV-PSTVNAPQQTNANTLSNSSMNTLQSNASLVQPSSN 833



 Score = 93.2 bits (230), Expect = 2e-15
 Identities = 63/141 (44%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
 Frame = -3

Query: 4319 DYLRKISLKMLTMETKSQGGA--SNSLPSITGGNQNPPDPASQSLQQQVRNPGQPLPISL 4146
            DYLRKISLKML++ETK+Q     ++S+P+ T  NQNP D        QV N GQ L I +
Sbjct: 72   DYLRKISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD--------QVGNQGQSLAIPM 123

Query: 4145 SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVVGQNSNLQPMPG 3966
             N    RQQLLP                        + GL Q+ +S+V GQ SNLQ MPG
Sbjct: 124  VNPFPARQQLLPQNLQNNTSTAVQSSANLPSALSS-IAGLGQSNISSV-GQTSNLQNMPG 181

Query: 3965 ISHNSVNNSVGQGVQSNMFPN 3903
            IS NSV+NSVGQG   +++ N
Sbjct: 182  ISQNSVSNSVGQGAAPDIYAN 202


>ref|XP_010936105.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Elaeis guineensis]
          Length = 1391

 Score =  537 bits (1384), Expect = e-149
 Identities = 289/459 (62%), Positives = 332/459 (72%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1781 SEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQH 1602
            +E+N+ KVRPG G+K GL+ Q +  G RP  YHQ LKP A F ISSPQ LQ++SPQ+S H
Sbjct: 934  NEVNESKVRPGLGIKAGLYQQHYPAGQRPGYYHQ-LKPGASFPISSPQNLQSSSPQISHH 992

Query: 1601 SSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSVIPGDSEKQAPAISSISNAGN 1422
            SSPQ+DQ NLL +  K GTPL                 S IP DSEKQ   +SS++NAG+
Sbjct: 993  SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPADSEKQLSGLSSLTNAGH 1052

Query: 1421 IGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLERL 1245
            +GHQQ+A    Q QSLA+ TPGISASP LAE +S DGNQ   P+ + GK +A ERPLERL
Sbjct: 1053 VGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLERL 1112

Query: 1244 IKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1065
            IK V+S +PKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM
Sbjct: 1113 IKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1172

Query: 1064 SHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIETN 885
            S DGSA TKK++R+TSAMPLN VSS GSVN+SFKQ              S +KR KIE N
Sbjct: 1173 SQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEVN 1232

Query: 884  HTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYASP 705
            H LLEE+ EIN +LIDTVV                 GTV+KCSF AVALSP+LKSQ+AS 
Sbjct: 1233 HALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFASS 1292

Query: 704  QMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPISLG 525
            Q+SPILPLRLLVP+NYP CSP+LLDKLP E S E++DLSVKAK  F+I LRGL QP+SLG
Sbjct: 1293 QISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSLG 1352

Query: 524  EMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            EMA+TWD CARKVIAEYAQQ+GGGSFSSRYG WENCV A
Sbjct: 1353 EMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1391



 Score =  223 bits (569), Expect = 9e-55
 Identities = 132/289 (45%), Positives = 168/289 (58%), Gaps = 1/289 (0%)
 Frame = -3

Query: 2897 IQPSGALLQPQRALPEASS-TSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELY 2721
            I+     +Q QR L + SS TS+DS AQTG  GV D QEE+YQKIKS +EMY  +L E Y
Sbjct: 571  IEQQKHFIQAQRVLRDVSSNTSVDSIAQTGDAGVADLQEEIYQKIKSWREMYFTDLNEFY 630

Query: 2720 QKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEK 2541
            QK+A+K QQHDA++   K S+  EK+K FK+MLER +  LQ+ K+NI P  K+KL  YE+
Sbjct: 631  QKVALKLQQHDALIPPAKPSEQYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYER 690

Query: 2540 QIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNSMQPMN 2361
            QI  VL S + KK                                  QH+N  N +Q MN
Sbjct: 691  QIHNVLASTK-KKGIPSQSQGQQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMN 749

Query: 2360 MQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQG 2181
            +Q S TSMQ +AVT  QH SMPLPT+ GV              +NLDS  G S NSL QG
Sbjct: 750  LQVSATSMQPSAVTGMQHVSMPLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQG 809

Query: 2180 VVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSN 2034
             +GS+QQ GVG +  +T+NA QQTN + LS ++MN  Q N S +Q +SN
Sbjct: 810  AMGSMQQVGVGSV-PSTVNAPQQTNANTLSNSSMNTLQSNASLVQPSSN 857



 Score =  188 bits (478), Expect = 3e-44
 Identities = 114/214 (53%), Positives = 138/214 (64%), Gaps = 5/214 (2%)
 Frame = -3

Query: 4529 NWRPPQGEPTMD---GGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVR 4359
            +WRP  GEP+      GDWR+QL  ++R RI+NKIM+TLKRHLPIS PEGL EL+KIAVR
Sbjct: 23   SWRPAHGEPSATDAAAGDWRSQLQHDARLRIINKIMDTLKRHLPISVPEGLNELQKIAVR 82

Query: 4358 FEEKIYTAATSQSDYLRKISLKMLTMETKSQ--GGASNSLPSITGGNQNPPDPASQSLQQ 4185
            FEEKIY AATSQ DYLRKISLKML++ETK+Q     ++S+P+ T  NQNP D        
Sbjct: 83   FEEKIYNAATSQPDYLRKISLKMLSIETKTQHTPPINSSMPNTTIPNQNPTD-------- 134

Query: 4184 QVRNPGQPLPISLSNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSN 4005
            QV N GQ L I + N    RQQLLP                       S+ GL Q+ +S+
Sbjct: 135  QVGNQGQSLAIPMVNPFPARQQLLP-QNLQNNTSTAVQSSANLPSALSSIAGLGQSNISS 193

Query: 4004 VVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPN 3903
             VGQ SNLQ MPGIS NSV+NSVGQG   +++ N
Sbjct: 194  -VGQTSNLQNMPGISQNSVSNSVGQGAAPDIYAN 226


>ref|XP_010936104.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Elaeis guineensis]
          Length = 1398

 Score =  537 bits (1384), Expect = e-149
 Identities = 289/459 (62%), Positives = 332/459 (72%), Gaps = 1/459 (0%)
 Frame = -3

Query: 1781 SEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQH 1602
            +E+N+ KVRPG G+K GL+ Q +  G RP  YHQ LKP A F ISSPQ LQ++SPQ+S H
Sbjct: 941  NEVNESKVRPGLGIKAGLYQQHYPAGQRPGYYHQ-LKPGASFPISSPQNLQSSSPQISHH 999

Query: 1601 SSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSVIPGDSEKQAPAISSISNAGN 1422
            SSPQ+DQ NLL +  K GTPL                 S IP DSEKQ   +SS++NAG+
Sbjct: 1000 SSPQVDQHNLLPSQVKAGTPLQSANSPFVPSPSTPLAPSPIPADSEKQLSGLSSLTNAGH 1059

Query: 1421 IGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLERL 1245
            +GHQQ+A    Q QSLA+ TPGISASP LAE +S DGNQ   P+ + GK +A ERPLERL
Sbjct: 1060 VGHQQSALAPPQTQSLAVGTPGISASPFLAEYTSPDGNQANVPSVVPGKTNASERPLERL 1119

Query: 1244 IKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1065
            IK V+S +PKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM
Sbjct: 1120 IKVVKSSTPKALSSAVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNFM 1179

Query: 1064 SHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIETN 885
            S DGSA TKK++R+TSAMPLN VSS GSVN+SFKQ              S +KR KIE N
Sbjct: 1180 SQDGSATTKKIKRNTSAMPLNNVSSAGSVNESFKQSYGLDTSELESTATSHVKRQKIEVN 1239

Query: 884  HTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYASP 705
            H LLEE+ EIN +LIDTVV                 GTV+KCSF AVALSP+LKSQ+AS 
Sbjct: 1240 HALLEEISEINQQLIDTVVNISEEDADSIAAASDGEGTVIKCSFTAVALSPSLKSQFASS 1299

Query: 704  QMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPISLG 525
            Q+SPILPLRLLVP+NYP CSP+LLDKLP E S E++DLSVKAK  F+I LRGL QP+SLG
Sbjct: 1300 QISPILPLRLLVPANYPKCSPVLLDKLPDESSGETDDLSVKAKSRFSISLRGLSQPMSLG 1359

Query: 524  EMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            EMA+TWD CARKVIAEYAQQ+GGGSFSSRYG WENCV A
Sbjct: 1360 EMAKTWDACARKVIAEYAQQTGGGSFSSRYGAWENCVGA 1398



 Score =  236 bits (601), Expect = 2e-58
 Identities = 135/289 (46%), Positives = 173/289 (59%), Gaps = 1/289 (0%)
 Frame = -3

Query: 2897 IQPSGALLQPQRALPE-ASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELY 2721
            I+     +Q  R LP+ +SSTS+DSTAQTGH GV DWQEE+YQKIKS KEMY  +L+E Y
Sbjct: 578  IEQQKQFIQAPRVLPDVSSSTSVDSTAQTGHAGVADWQEEIYQKIKSWKEMYYTDLSEFY 637

Query: 2720 QKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEK 2541
            QK+++K QQHDA++   K S+  EK+K FK+MLER +  LQ+ K+NI P  K+KL  YE+
Sbjct: 638  QKLSLKLQQHDALIPPAKPSEQYEKMKTFKTMLERTLVILQISKNNIQPGLKEKLPLYER 697

Query: 2540 QIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNSMQPMN 2361
            QI  VL S + KK                                  QH+N  N +Q MN
Sbjct: 698  QIHNVLASTK-KKGIPSQSQGQQQFQHPGGLAHSMPQQQPSQVSQLQQHDNHPNQVQQMN 756

Query: 2360 MQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQG 2181
            +Q S TSMQ +AVT  QH SMPLPT+ GV              +NLDS  G S NSL QG
Sbjct: 757  LQVSATSMQPSAVTGMQHVSMPLPTNFGVPTTQQNITNALQPAANLDSVQGSSFNSLQQG 816

Query: 2180 VVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSN 2034
             +GS+QQ GVG +  +T+NA QQTN + LS ++MN  Q N S +Q +SN
Sbjct: 817  AMGSMQQVGVGSV-PSTVNAPQQTNANTLSNSSMNTLQSNASLVQPSSN 864



 Score =  194 bits (492), Expect = 7e-46
 Identities = 116/215 (53%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
 Frame = -3

Query: 4529 NWRPPQGEPTMD---GGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVR 4359
            +WRP  GEP+      GDWR+QL  ++R RI+NKIM+TLKRHLPIS PEGL EL+KIAVR
Sbjct: 23   SWRPAHGEPSATDAAAGDWRSQLQHDARLRIINKIMDTLKRHLPISVPEGLNELQKIAVR 82

Query: 4358 FEEKIYTAATSQSDYLRKISLKMLTMETKSQGGA--SNSLPSITGGNQNPPDPASQSLQQ 4185
            FEEKIY+AATSQ DYLRKISLKML+METK+Q  A  ++S+P+ T  NQNP D      Q 
Sbjct: 83   FEEKIYSAATSQPDYLRKISLKMLSMETKTQHTAPINSSMPNTTIPNQNPTD------QV 136

Query: 4184 QVRNPGQPLPISLSNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSN 4005
             + N GQ L I + N    RQQLLP                       S+TGL Q+ +S+
Sbjct: 137  SLGNQGQSLAIPMVNPPAARQQLLP-QNLQNNTSTAVQSSANLPSALSSITGLGQSNISS 195

Query: 4004 VVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
             VGQ SNLQ MPGIS NSV+NSVGQG   +++ N+
Sbjct: 196  -VGQTSNLQNMPGISQNSVSNSVGQGAAPDIYANA 229


>ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            15a-like isoform X1 [Citrus sinensis]
          Length = 1378

 Score =  535 bits (1379), Expect = e-148
 Identities = 296/464 (63%), Positives = 333/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G  VKPG+F Q    G R    HQ LKP A F+ISSPQLLQ  SPQ+ Q
Sbjct: 914  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFSISSPQLLQTASPQIPQ 973

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLL +++K GTPL                    +PGDSEK    ISS+SNA
Sbjct: 974  HSSPQVDQQNLLQSITKSGTPLQPVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1033

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGHQQT+     A SLAI TPGISASPLLAE +  DG  G A T IS K S  E+PLE
Sbjct: 1034 GNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1093

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1094 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1153

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DGS+  +KMRR+TSAMPL+ VSS GS+NDSFKQL             S IKR +IE
Sbjct: 1154 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1213

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   TVVKCSF+AVALSPNLKS
Sbjct: 1214 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1273

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR L Q
Sbjct: 1274 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1333

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+EYAQQSGGGSFSS+YGTWENC+SA
Sbjct: 1334 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1377



 Score =  234 bits (597), Expect = 5e-58
 Identities = 138/284 (48%), Positives = 174/284 (61%), Gaps = 1/284 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DST QTG    VDWQEEVYQKIK+MKEMYLPEL E+YQKIA K 
Sbjct: 569  LYQPQRALPETSSTSLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKL 628

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK SD +EKLK+FK+MLER+ITFLQV KSNI P +K+KL  YEKQI+  ++
Sbjct: 629  QQHDSLPQQPK-SDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFIS 687

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNS-MQPMNMQGSVT 2343
            +NR +KP                                  H+N +NS +Q MN+ GS+ 
Sbjct: 688  TNRPRKPV----SSMQQQGQLPPTHMHSMQQQQSQISQGQPHDNQMNSQIQSMNLAGSMV 743

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   VTN QH S  +P+  GV               N+DSG G S++S+ Q   GSLQ
Sbjct: 744  TMQQNNVTNVQHNS--VPSVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQ 801

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSNI 2031
            QN V   QQ +IN       +  SQ+ +N  Q N++ LQ+ SN+
Sbjct: 802  QNSVSAPQQASIN-------NLPSQSGVNMLQSNINPLQSNSNM 838



 Score =  223 bits (568), Expect = 1e-54
 Identities = 128/214 (59%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
 Frame = -3

Query: 4529 NWRP--PQGEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP  P GE  +D GDWR QL P+SR RIVNKIM+TLKRHLP SG +GL EL+KIA RF
Sbjct: 5    NWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRF 64

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQV 4179
            EEKIYTAA+SQSDYLRKISLKML+ME+KSQ    NSL S   G+ N PPDP   S+Q QV
Sbjct: 65   EEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPV--SMQNQV 122

Query: 4178 RNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNV 4002
             N GQ LPI LS NQSQ RQQLL                        SV+GL+Q+ + +V
Sbjct: 123  HNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSV 182

Query: 4001 VGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            VGQ  N+Q M GIS NS  NS+GQGV SN+F NS
Sbjct: 183  VGQTVNMQNMSGISQNSGGNSMGQGVPSNLFANS 216


>gb|KDO52330.1| hypothetical protein CISIN_1g000769mg [Citrus sinensis]
          Length = 1265

 Score =  535 bits (1377), Expect = e-148
 Identities = 296/464 (63%), Positives = 332/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G  VKPG+F Q    G R    HQ LKP A F ISSPQLLQ  SPQ+ Q
Sbjct: 801  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 860

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLL +++K GTPL                    +PGDSEK    ISS+SNA
Sbjct: 861  HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 920

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGHQQT+     A SLAI TPGISASPLLAE +  DG  G A T IS K S  E+PLE
Sbjct: 921  GNIGHQQTSSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 980

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 981  RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1040

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DGS+  +KMRR+TSAMPL+ VSS GS+NDSFKQL             S IKR +IE
Sbjct: 1041 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1100

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   TVVKCSF+AVALSPNLKS
Sbjct: 1101 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1160

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR L Q
Sbjct: 1161 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1220

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+EYAQQSGGGSFSS+YGTWENC+SA
Sbjct: 1221 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1264



 Score =  234 bits (598), Expect = 4e-58
 Identities = 138/284 (48%), Positives = 175/284 (61%), Gaps = 1/284 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DST QTG    VDWQEEVYQKIK+MKEMYLPEL E+YQKIA K 
Sbjct: 456  LYQPQRALPETSSTSLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKL 515

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK SD +EKLK+FK+MLER+ITFLQV KSNI P +K+KL  YEKQI+  ++
Sbjct: 516  QQHDSLPQQPK-SDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFIS 574

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNS-MQPMNMQGSVT 2343
            +NR +KP                                  H+N +NS +Q MN+ GS+ 
Sbjct: 575  TNRPRKPV----SSMQQQGQLPPTHMHSMQQQQSQISQGQPHDNQMNSQIQSMNLAGSMV 630

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   VTN QH S  +P+  GV               N+DSG G S++S+ Q   GSLQ
Sbjct: 631  TMQPNNVTNVQHNS--VPSVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQ 688

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSNI 2031
            QN V   QQ +IN       +  SQ+ +N  Q N+++LQ+ SN+
Sbjct: 689  QNSVSAPQQASIN-------NLPSQSGVNMLQSNINALQSNSNM 725



 Score = 78.6 bits (192), Expect = 5e-11
 Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = -3

Query: 4193 LQQQVRNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQT 4017
            +Q QV N GQ LPI LS NQSQ RQQLL                        SV+GL+Q+
Sbjct: 1    MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQS 60

Query: 4016 TMSNVVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
             + +VVGQ  N+Q M GIS NS  NS+GQGV SN+F NS
Sbjct: 61   PIPSVVGQTVNMQNMSGISQNSGGNSMGQGVPSNLFANS 99


>ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
            gi|557529486|gb|ESR40736.1| hypothetical protein
            CICLE_v10024717mg [Citrus clementina]
          Length = 1383

 Score =  534 bits (1376), Expect = e-148
 Identities = 296/464 (63%), Positives = 331/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G  VKPG+F Q    G R    HQ LKP A F ISSPQLLQ  SPQ+ Q
Sbjct: 919  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 978

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLL +++K GTPL                    +PGDSEK    ISS+SNA
Sbjct: 979  HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1038

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGHQQT      A SLAI TPGISASPLLAE +  DG  G A T IS K S  E+PLE
Sbjct: 1039 GNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1098

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1099 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1158

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DGS+  +KMRR+TSAMPL+ VSS GS+NDSFKQL             S IKR +IE
Sbjct: 1159 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRIE 1218

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   TVVKCSF+AVALSPNLKS
Sbjct: 1219 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1278

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR L Q
Sbjct: 1279 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1338

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+EYAQQSGGGSFSS+YGTWENC+SA
Sbjct: 1339 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1382



 Score =  234 bits (598), Expect = 4e-58
 Identities = 138/284 (48%), Positives = 175/284 (61%), Gaps = 1/284 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DST QTG    VDWQEEVYQKIK+MKEMYLPEL E+YQKIA K 
Sbjct: 574  LYQPQRALPETSSTSLDSTHQTGQANGVDWQEEVYQKIKTMKEMYLPELNEMYQKIAAKL 633

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK SD +EKLK+FK+MLER+ITFLQV KSNI P +K+KL  YEKQI+  ++
Sbjct: 634  QQHDSLPQQPK-SDQLEKLKIFKTMLERIITFLQVSKSNILPGFKEKLGSYEKQIVNFIS 692

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNS-MQPMNMQGSVT 2343
            +NR +KP                                  H+N +NS +Q MN+ GS+ 
Sbjct: 693  TNRPRKPV----SSMQQQGQLPPTHMHSMQQQQSQISQGQPHDNQMNSQIQSMNLAGSMV 748

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   VTN QH S  +P+  GV               N+DSG G S++S+ Q   GSLQ
Sbjct: 749  TMQPNNVTNVQHNS--VPSVSGVSTSQQNMLNSVQPGPNMDSGQGTSLSSMHQVNAGSLQ 806

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSNI 2031
            QN V   QQ +IN       +  SQ+ +N  Q N+++LQ+ SN+
Sbjct: 807  QNSVSAPQQASIN-------NLPSQSGVNMLQSNINALQSNSNM 843



 Score =  223 bits (568), Expect = 1e-54
 Identities = 128/214 (59%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
 Frame = -3

Query: 4529 NWRP--PQGEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP  P GE  +D GDWR QL P+SR RIVNKIM+TLKRHLP SG +GL EL+KIA RF
Sbjct: 5    NWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRF 64

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQV 4179
            EEKIYTAA+SQSDYLRKISLKML+ME+KSQ    NSL S   G+ N PPDP   S+Q QV
Sbjct: 65   EEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG--SMQNQV 122

Query: 4178 RNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNV 4002
             N GQ LPI LS NQSQ RQQLL                        SV+GL+Q+ + +V
Sbjct: 123  HNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSSALPSVSGLSQSPIPSV 182

Query: 4001 VGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            VGQ  N+Q M GIS NS  NS+GQGV SN+F NS
Sbjct: 183  VGQTVNMQNMSGISQNSGGNSMGQGVPSNLFANS 216


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  533 bits (1373), Expect = e-148
 Identities = 295/464 (63%), Positives = 331/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G  VKPG+F Q    G R    HQ LKP A F ISSPQLLQ  SPQ+ Q
Sbjct: 941  MNDVNDLKIRQGMAVKPGVFQQHLTSGQRSAYSHQPLKPGAQFPISSPQLLQTASPQIPQ 1000

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLL +++K GTPL                    +PGDSEK    ISS+SNA
Sbjct: 1001 HSSPQVDQQNLLQSITKSGTPLQSVNSPFVVPSPSTPMAPSPMPGDSEKPISGISSLSNA 1060

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIGHQQT      A SLAI TPGISASPLLAE +  DG  G A T IS K S  E+PLE
Sbjct: 1061 GNIGHQQTTSAQAAAPSLAIGTPGISASPLLAEFTGPDGAHGNALTAISIKASVTEQPLE 1120

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1121 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1180

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DGS+  +KMRR+TSAMPL+ VSS GS+NDSFKQL             S IKR ++E
Sbjct: 1181 FITQDGSSGPRKMRRYTSAMPLSVVSSAGSMNDSFKQLTGSETSDLESTATSSIKRPRME 1240

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   TVVKCSF+AVALSPNLKS
Sbjct: 1241 ANHALLEEIREINQRLIDTVVDISDEDADPTAAGSAGEGGEGTVVKCSFSAVALSPNLKS 1300

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR L Q
Sbjct: 1301 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQ 1360

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+EYAQQSGGGSFSS+YGTWENC+SA
Sbjct: 1361 PMSLGEIARTWDVCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1404



 Score =  235 bits (600), Expect = 2e-58
 Identities = 138/284 (48%), Positives = 175/284 (61%), Gaps = 1/284 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DST QTG    VDWQEEVYQKIKSMKEMYLPEL E+YQKIA K 
Sbjct: 586  LYQPQRALPETSSTSLDSTHQTGQANGVDWQEEVYQKIKSMKEMYLPELNEMYQKIAAKL 645

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK SD +EKLK+FK+MLER+I+FLQV KSNI P++K+KL  YEKQI+  ++
Sbjct: 646  QQHDSLPQQPK-SDQLEKLKIFKTMLERIISFLQVSKSNILPSFKEKLGSYEKQIVNFIS 704

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVNS-MQPMNMQGSVT 2343
            +NR +KP                                  H+N +NS +Q MN+ GS+ 
Sbjct: 705  TNRPRKPV----SSMQQQGQLPPTHMHSMQQQQSQISQGQPHDNQMNSQIQSMNLAGSMV 760

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   VTN QH S  +P+  GV               N+DSG G S++S+ Q   GSLQ
Sbjct: 761  TMQPNNVTNVQHNS--VPSVSGVSTSQQNMLNSVLPGPNMDSGQGTSLSSMHQVNAGSLQ 818

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQTTSNI 2031
            QN V   QQ +IN       +  SQ+ +N  Q N++ LQ+ SN+
Sbjct: 819  QNSVSAPQQASIN-------NLASQSGVNMLQSNINPLQSNSNM 855



 Score =  223 bits (568), Expect = 1e-54
 Identities = 128/214 (59%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
 Frame = -3

Query: 4529 NWRP--PQGEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP  P GE  +D GDWR QL P+SR RIVNKIM+TLKRHLP SG +GL EL+KIA RF
Sbjct: 20   NWRPTPPVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGLNELKKIAGRF 79

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQV 4179
            EEKIYTAA+SQSDYLRKISLKML+ME+KSQ    NSL S   G+ N PPDP   S+Q QV
Sbjct: 80   EEKIYTAASSQSDYLRKISLKMLSMESKSQNAMPNSLQSNNPGSSNRPPDPG--SMQNQV 137

Query: 4178 RNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNV 4002
             N GQ LPI LS NQSQ RQQLL                        SV+GL+Q+ + +V
Sbjct: 138  HNQGQSLPIPLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSSALPSVSGLSQSPIPSV 197

Query: 4001 VGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            VGQ  N+Q M GIS NS  NS+GQGV SN+F NS
Sbjct: 198  VGQTVNMQNMSGISQNSGGNSMGQGVPSNLFANS 231


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  530 bits (1366), Expect = e-147
 Identities = 291/464 (62%), Positives = 329/464 (70%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+RPG GVKPG+F Q    G R T  HQQ+KP A F ISSPQLLQA SPQL+Q
Sbjct: 918  MNDVNDLKIRPGMGVKPGVFQQHLSAGQRTTYPHQQMKPGASFPISSPQLLQAASPQLTQ 977

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQIDQQNLLS+L+K GTPL                    +PGDSEK    ISS+SNA
Sbjct: 978  HSSPQIDQQNLLSSLTKTGTPLQSANSPFVVQSPSTPLAPSPMPGDSEKPITGISSLSNA 1037

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GNIG QQ         SLAI TPGISASPLLAE +  D       T  SGK +  E+PLE
Sbjct: 1038 GNIGQQQATVAQAPVPSLAIGTPGISASPLLAEFTGSDVGLANTLTTASGKSTVTEQPLE 1097

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SPKA            SMIDRIA SAPGNGSRAAVGEDLVAMT CRLQARN
Sbjct: 1098 RLIKAVKSMSPKALSASVSDIGSVVSMIDRIASSAPGNGSRAAVGEDLVAMTNCRLQARN 1157

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DG + T+KMRR+TSAMPLN VSS  S++DSFKQ              S +KR ++E
Sbjct: 1158 FITQDGMSGTRKMRRYTSAMPLNVVSSASSISDSFKQFNGAETSELESTATSSVKRPRLE 1217

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   T+VKCSF+AVALSPNLKS
Sbjct: 1218 ANHALLEEIREINQRLIDTVVDISEEDVDPTAGAATAGGGEGTIVKCSFSAVALSPNLKS 1277

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDKLP+E SKE EDLSVKAK  FNI LR L Q
Sbjct: 1278 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQ 1337

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+E+AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1338 PMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1381



 Score =  242 bits (618), Expect = 2e-60
 Identities = 135/215 (62%), Positives = 150/215 (69%), Gaps = 5/215 (2%)
 Frame = -3

Query: 4529 NWRPPQ--GEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP    GEP +D GDWR  L P+SR RIVNKIMETLKRHLP SG EGL EL+KIAVRF
Sbjct: 5    NWRPTAQGGEPAVDTGDWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGLEELKKIAVRF 64

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDP-ASQSLQQQ 4182
            EEKIYTAATSQSDYLRKISLKMLTME+KSQ    NS+P    GN N PPDP ASQS+Q Q
Sbjct: 65   EEKIYTAATSQSDYLRKISLKMLTMESKSQNNVPNSVPPNPFGNNNRPPDPGASQSMQPQ 124

Query: 4181 VRNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSN 4005
            V N GQ LP+ LS NQ+QTRQQLL                         V+GL QT++ N
Sbjct: 125  VHNQGQSLPVPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLTSALPPVSGLAQTSIPN 184

Query: 4004 VVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            VVGQNSN+Q + G+  NS  NS+GQGV SNMF NS
Sbjct: 185  VVGQNSNMQNISGVPQNSAGNSLGQGVPSNMFANS 219



 Score =  219 bits (558), Expect = 2e-53
 Identities = 134/285 (47%), Positives = 173/285 (60%), Gaps = 2/285 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L Q QR LPE SSTS+DSTAQTGH   VD QEEVYQKIK+MKEMY PEL E+Y KIA K 
Sbjct: 579  LYQSQRPLPETSSTSLDSTAQTGHANAVDVQEEVYQKIKAMKEMYFPELNEMYHKIATKL 638

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ Q PK ++ +EKL+LFKSMLER+ITFLQVPKS++ P++++KL  YEKQII  + 
Sbjct: 639  QQHDSLPQPPK-TEQLEKLRLFKSMLERIITFLQVPKSSVMPSFREKLGSYEKQIINFIN 697

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVN-SMQPMNMQGSVT 2343
            +NR K+                                   HE+ +N  MQ MNMQGSV 
Sbjct: 698  TNRPKR--------QITSMQQGQLSQPQIQQPQSQVPQVQSHESQMNPQMQSMNMQGSVQ 749

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   +++ Q    PLP+  GV              SNLDS  G+        V+ SLQ
Sbjct: 750  TMQQNNMSSLQ--QTPLPSLSGVSSSQQSMMSSMQSASNLDSVQGN--------VMSSLQ 799

Query: 2162 QNGVGPLQQNTINASQQTNMSAL-SQNNMNQSQPNVSSLQTTSNI 2031
            Q G+G  QQN ++++QQ N+  L SQ+ +N  QPN+ SLQ+ SN+
Sbjct: 800  QGGLGSHQQNPVSSAQQANIPNLSSQSGVNMLQPNI-SLQSNSNM 843


>ref|XP_010658921.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Vitis vinifera]
          Length = 1333

 Score =  518 bits (1334), Expect = e-143
 Identities = 291/466 (62%), Positives = 327/466 (70%), Gaps = 7/466 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGV-KPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLS 1608
            ++++ND K+R G    KPG+F Q H    + + Y QQLK    F ISSPQLLQ  SPQ+ 
Sbjct: 868  MNDVNDLKMRQGMSANKPGVFHQ-HQGAVQRSAYPQQLKSGTSFPISSPQLLQTASPQIP 926

Query: 1607 QHSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISN 1431
            QHSSPQIDQQNLL++L+K GTPL                    +PG+SEK    IS I+N
Sbjct: 927  QHSSPQIDQQNLLTSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGESEKLNSGISLITN 986

Query: 1430 AGNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPL 1254
            AGNIGH QT   L    SLAI TPGISASPLLAE +SLDGN G A T +SGK S  E+PL
Sbjct: 987  AGNIGHHQTTGALAPPPSLAIGTPGISASPLLAEFTSLDGNHGNASTMVSGKSSVTEQPL 1046

Query: 1253 ERLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1074
            ERLIK V+ +SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR
Sbjct: 1047 ERLIKVVKLMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1106

Query: 1073 NFMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKI 894
            NF++ DG+A T+KMRR+TSAMPLN VSS GSVNDSFKQL             S  KR +I
Sbjct: 1107 NFITLDGAAGTRKMRRYTSAMPLNVVSSAGSVNDSFKQLAGSETSDLESTATSSAKRPRI 1166

Query: 893  ETNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG----TVVKCSFNAVALSPNL 726
            E NH LLEE+REIN RLIDTVV                      T+VKCSF+AVALSPNL
Sbjct: 1167 EVNHALLEEIREINQRLIDTVVDISHEDVDPAAAAAAAAEGGEGTIVKCSFSAVALSPNL 1226

Query: 725  KSQYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGL 546
            KSQY S QMSPI PLRLLVP+NYPN SPILLDK P+E SKE EDLSVKAK  F+I LR L
Sbjct: 1227 KSQYTSTQMSPIQPLRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSL 1286

Query: 545  PQPISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
             QP+SLGE+ARTWDVCAR VI+EYAQQSGGGSFSSRYG WENC+SA
Sbjct: 1287 SQPMSLGEIARTWDVCARAVISEYAQQSGGGSFSSRYGAWENCLSA 1332



 Score =  244 bits (622), Expect = 6e-61
 Identities = 136/212 (64%), Positives = 150/212 (70%), Gaps = 2/212 (0%)
 Frame = -3

Query: 4529 NWRPPQGEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRFEE 4350
            NWRP Q E  MD GDWR QL P+SR   VN+IM+TLKRHLP+SG EGL ELRKIAVRFEE
Sbjct: 5    NWRPAQAEQAMDLGDWRTQLSPDSRQGTVNRIMDTLKRHLPVSGQEGLHELRKIAVRFEE 64

Query: 4349 KIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGN-QNPPDPASQSLQQQVRN 4173
            KIYTAATSQSDYLRKISLKMLTMETKSQ    ++LPS + GN +NPPDPAS S+Q QV N
Sbjct: 65   KIYTAATSQSDYLRKISLKMLTMETKSQTAMPSNLPSNSAGNSKNPPDPASHSMQPQVHN 124

Query: 4172 PGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVVG 3996
             GQ LP+ L+ NQSQTRQQLL                        SVT L QT M NVVG
Sbjct: 125  QGQQLPVPLAPNQSQTRQQLL-AQNIQTNIASGVPSSASLPSTLSSVTSLNQTPMQNVVG 183

Query: 3995 QNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            QNS +Q + GI  NSV NS+GQGV SNMF NS
Sbjct: 184  QNSGMQNISGIPQNSVGNSMGQGVPSNMFANS 215



 Score =  231 bits (589), Expect = 4e-57
 Identities = 139/299 (46%), Positives = 179/299 (59%), Gaps = 14/299 (4%)
 Frame = -3

Query: 2900 RIQPSGALLQPQ-------------RALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKS 2760
            R+Q SGALLQ Q             RALPEASSTS+DSTAQTG + V DWQEEVYQKIK 
Sbjct: 516  RLQTSGALLQTQNVIDQQKQLFQSQRALPEASSTSLDSTAQTGTINVGDWQEEVYQKIKR 575

Query: 2759 MKEMYLPELTELYQKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNI 2580
            MKEMYLP+L E++QKIA K QQHD++ QQPK ++ +EKLK+FK+MLERMIT LQ+ K++I
Sbjct: 576  MKEMYLPDLNEMHQKIAAKLQQHDSLPQQPK-TEQLEKLKIFKAMLERMITVLQLSKNSI 634

Query: 2579 SPTYKDKLAQYEKQIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2400
            +P +K+KL  YEKQI+  + ++R +KP                                 
Sbjct: 635  TPNFKEKLIGYEKQIVSFINTHRPRKPVPPLQHGQSSVSHMHSMQQPQQSQSQLSQGQP- 693

Query: 2399 QHENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNL 2223
             HEN +N  +QPMN+QGSV +MQ   V + Q  SMP  +  G+             ++NL
Sbjct: 694  -HENQMNPQLQPMNLQGSVATMQQNNVPSLQPSSMP--SLSGLPNAQQNIMNSLQSSANL 750

Query: 2222 DSGPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNVSSLQ 2046
            DSG G+++ SL Q  VG+LQQN V   QQ  IN     N   + Q N+NQ QPN + LQ
Sbjct: 751  DSGQGNALTSLQQAAVGALQQNPVSAPQQANINNLSSQNGVNVLQQNINQLQPNSNMLQ 809


>ref|XP_007023331.1| Uncharacterized protein TCM_027312 [Theobroma cacao]
            gi|508778697|gb|EOY25953.1| Uncharacterized protein
            TCM_027312 [Theobroma cacao]
          Length = 1367

 Score =  516 bits (1329), Expect = e-143
 Identities = 284/464 (61%), Positives = 329/464 (70%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G GVKPG+F Q    G R +  HQQLKP + F ISSPQLLQA SPQ+ Q
Sbjct: 903  MNDVNDMKMRQGMGVKPGVFQQHLPAGQRQSYTHQQLKPGSQFPISSPQLLQAASPQMPQ 962

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQ+LL+++SK GTPL                    + G+SEK  P  SS+SNA
Sbjct: 963  HSSPQVDQQSLLTSISKTGTPLQSANSPFVVPSPSTPLAPSPMLGESEKPVPGTSSLSNA 1022

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
             N+GHQQ       +QSLAI TPGISASPLLAE +  DG   TA T +S + +  E+PLE
Sbjct: 1023 ANVGHQQGTGVQPGSQSLAIGTPGISASPLLAEFTGADGTHPTALTTVSSRSNITEQPLE 1082

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RL+KAV+S+SP A            SM DRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN
Sbjct: 1083 RLMKAVKSMSPTALGASVSDIGSVVSMTDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1142

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DG   TK+MRR+TSAMPLN VSS GSVNDSFKQL             S +KR +IE
Sbjct: 1143 FITQDGMNGTKRMRRYTSAMPLNVVSSAGSVNDSFKQLTGSETSDLESTATSSVKRPRIE 1202

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   T+VKCSF+AVALS NLKS
Sbjct: 1203 ANHALLEEIREINLRLIDTVVDISDEDVDPSAAAATAEGGEGTIVKCSFSAVALSSNLKS 1262

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QY S QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR L Q
Sbjct: 1263 QYMSAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSRFSISLRTLSQ 1322

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWDVCAR VI+E+AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1323 PMSLGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1366



 Score =  236 bits (601), Expect = 2e-58
 Identities = 140/285 (49%), Positives = 179/285 (62%), Gaps = 2/285 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L Q QRA+PE SSTS+DSTAQTGH    DWQEEVYQKIK+MKE YLPEL E+YQKIA K 
Sbjct: 558  LYQSQRAVPETSSTSLDSTAQTGHANGGDWQEEVYQKIKTMKETYLPELNEMYQKIAAKL 617

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK SD +EKLKLFK+MLER+ITFL V K+NI PT+KDKL  YEKQII  + 
Sbjct: 618  QQHDSLPQQPK-SDQLEKLKLFKTMLERIITFLSVSKANILPTFKDKLTSYEKQIINFIN 676

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVN-SMQPMNMQGSVT 2343
            +NR +KPA                                 H+N +N  +Q +N+QGSV 
Sbjct: 677  TNRPRKPA-----STLQQGQLPPPHMHSMQQPQPQINQTQSHDNQMNPQLQSINIQGSVP 731

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ+  +T+ QH S  L +  GV              SNLDSG G+++        GS+Q
Sbjct: 732  TMQTNNMTSLQHNS--LSSLPGVSTAQQTMLNSLQPGSNLDSGQGNAL--------GSMQ 781

Query: 2162 QNGVGPLQQNTINASQQTNMSAL-SQNNMNQSQPNVSSLQTTSNI 2031
            Q   GPLQQN ++ SQQ N+S+L SQ+ ++  Q N++ LQ+ SN+
Sbjct: 782  QVAPGPLQQNPVSTSQQANISSLSSQSGISVLQQNMNPLQSNSNM 826



 Score =  233 bits (595), Expect = 8e-58
 Identities = 131/212 (61%), Positives = 148/212 (69%), Gaps = 3/212 (1%)
 Frame = -3

Query: 4529 NWRP--PQGEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP  P GEPTMD GDWR QL  +SR RIVNKIM+TLKRHLP SG EGL ELRKIAVRF
Sbjct: 5    NWRPTPPSGEPTMDTGDWRTQLQADSRQRIVNKIMDTLKRHLPFSGQEGLNELRKIAVRF 64

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQNPPDPASQSLQQQVR 4176
            EEKI+TAA+SQSDYLR+ISLKMLTMETKSQ    NS+P+ TG N  PPDP SQ++Q QV 
Sbjct: 65   EEKIFTAASSQSDYLRRISLKMLTMETKSQ----NSIPN-TGNNGKPPDPGSQAMQNQVH 119

Query: 4175 NPGQPLPISL-SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVV 3999
              GQ +PI L SNQSQ RQQLLP                        V+GLTQ  + NVV
Sbjct: 120  GQGQSIPIPLQSNQSQARQQLLPQNVPNNMASAGVQSSAGLQSGMPPVSGLTQNPIPNVV 179

Query: 3998 GQNSNLQPMPGISHNSVNNSVGQGVQSNMFPN 3903
            GQNSN+Q M GI+     NS+GQG+ SN+F N
Sbjct: 180  GQNSNMQNMSGIT----QNSLGQGMPSNIFAN 207


>ref|XP_012073105.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Jatropha curcas]
            gi|802602269|ref|XP_012073106.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 15a isoform X2
            [Jatropha curcas]
          Length = 1362

 Score =  513 bits (1321), Expect = e-142
 Identities = 292/465 (62%), Positives = 330/465 (70%), Gaps = 6/465 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQY-HQQLKPSAPFAISSPQLLQATSPQLS 1608
            ++++N+ K+R G  VKPG+F Q HL   + T Y HQQLK  A F ISSPQL+QA SPQLS
Sbjct: 900  MNDVNELKIRQGMTVKPGVFQQ-HLPTIQRTAYPHQQLKSGASFPISSPQLIQAASPQLS 958

Query: 1607 QHSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISN 1431
            QHSSPQ+DQQNLLS   K GTPL                 +  I GDSEK    ISS+SN
Sbjct: 959  QHSSPQVDQQNLLS--IKAGTPLQSANSPFVAPSPSTPLNASPIQGDSEKPVSGISSLSN 1016

Query: 1430 AGNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPL 1254
            AG IG QQT      A SLAI TPGISASPLLAE +  DG  G A T  SGK +A E+PL
Sbjct: 1017 AGTIGQQQTTGAQAPAPSLAIGTPGISASPLLAEFTGSDGAPGNALTIASGKSAAMEQPL 1076

Query: 1253 ERLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1074
            ERLIK V+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMT CRLQAR
Sbjct: 1077 ERLIKVVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTNCRLQAR 1136

Query: 1073 NFMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKI 894
            NF++ DG + TKKMRR+TSAMPLN VSS  SV+DSFKQL             S +KR +I
Sbjct: 1137 NFITQDGVSGTKKMRRYTSAMPLNVVSSASSVSDSFKQLSGPETSDLESTATSCVKRPRI 1196

Query: 893  ETNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLK 723
            E NH LLEE+REIN RLIDTVV                 G   T+VKCSF+AVALSPNLK
Sbjct: 1197 EANHALLEEIREINQRLIDTVVDISEEDVDPTAAAAAFEGGEGTIVKCSFSAVALSPNLK 1256

Query: 722  SQYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLP 543
            SQYAS QMSPI PLRLLVP+NYPNCSPILLD LP+E SKE EDLSVKAK  FNI LR L 
Sbjct: 1257 SQYASAQMSPIQPLRLLVPANYPNCSPILLDNLPVEVSKEYEDLSVKAKSRFNISLRSLS 1316

Query: 542  QPISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            QP+SLG++A+TWDVCAR VI+++AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1317 QPMSLGDIAKTWDVCARAVISDHAQQSGGGSFSSKYGTWENCLSA 1361



 Score =  231 bits (588), Expect = 5e-57
 Identities = 133/215 (61%), Positives = 147/215 (68%), Gaps = 5/215 (2%)
 Frame = -3

Query: 4529 NWRPP-QG-EPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRF 4356
            NWRP  QG EPTMD GDWR QL P+SR RIVNKIMETLKRHLP S  EGL EL+KIAVRF
Sbjct: 5    NWRPTGQGAEPTMDAGDWRAQLQPDSRQRIVNKIMETLKRHLPFSSQEGLEELKKIAVRF 64

Query: 4355 EEKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDP-ASQSLQQQ 4182
            EEKIYTAA SQ DYLRKISLKMLTME+KS+    NSLP    GN N  PDP AS S+  Q
Sbjct: 65   EEKIYTAAASQPDYLRKISLKMLTMESKSENPMPNSLPPNASGNSNRAPDPGASHSMPPQ 124

Query: 4181 VRNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSN 4005
              + GQ LPI LS NQSQTRQQLLP                       SV+GL Q ++SN
Sbjct: 125  GHSQGQSLPIPLSVNQSQTRQQLLPQNIQNNMPSTGVQGSATLTSALPSVSGLAQNSISN 184

Query: 4004 VVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            VV QN N+Q +PG+  NS  NS+GQGV SN+F NS
Sbjct: 185  VVSQNPNMQNIPGVQQNSAANSMGQGVPSNIFANS 219



 Score =  219 bits (559), Expect = 1e-53
 Identities = 135/275 (49%), Positives = 167/275 (60%), Gaps = 1/275 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DSTAQTGH    DWQEEVYQKIK+MKEMYLPEL E+YQKI+ K 
Sbjct: 571  LYQPQRALPETSSTSLDSTAQTGHANGGDWQEEVYQKIKAMKEMYLPELNEMYQKISTKL 630

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQ K  + +EKLK+FK+MLER+I+FLQV K+NI P +KDKL  YEKQII  + 
Sbjct: 631  QQHDSLPQQSK-PEQLEKLKVFKAMLERIISFLQVSKNNILPGFKDKLGSYEKQIINFIN 689

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVN-SMQPMNMQGSVT 2343
            +NR +K                                   HEN +N  MQ MN+QGSV 
Sbjct: 690  TNRPRKST--------PSLQPGQIPQSHIQQPQSQVSQVQSHENQMNPQMQSMNLQGSVP 741

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   + + QH S  L +                 +SNLDSG G++M+SL Q  VGS+Q
Sbjct: 742  TMQQNNM-SLQHSS--LSSLSAASTSQQNMMNSLQPSSNLDSGQGNAMSSLQQATVGSVQ 798

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNV 2058
            QN V   QQ+ IN     N+S  SQN +N  QPN+
Sbjct: 799  QNPVSTPQQSNIN-----NLS--SQNGVNMLQPNI 826


>gb|KDP37023.1| hypothetical protein JCGZ_06079 [Jatropha curcas]
          Length = 1242

 Score =  513 bits (1321), Expect = e-142
 Identities = 292/465 (62%), Positives = 330/465 (70%), Gaps = 6/465 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQY-HQQLKPSAPFAISSPQLLQATSPQLS 1608
            ++++N+ K+R G  VKPG+F Q HL   + T Y HQQLK  A F ISSPQL+QA SPQLS
Sbjct: 780  MNDVNELKIRQGMTVKPGVFQQ-HLPTIQRTAYPHQQLKSGASFPISSPQLIQAASPQLS 838

Query: 1607 QHSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISN 1431
            QHSSPQ+DQQNLLS   K GTPL                 +  I GDSEK    ISS+SN
Sbjct: 839  QHSSPQVDQQNLLS--IKAGTPLQSANSPFVAPSPSTPLNASPIQGDSEKPVSGISSLSN 896

Query: 1430 AGNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPL 1254
            AG IG QQT      A SLAI TPGISASPLLAE +  DG  G A T  SGK +A E+PL
Sbjct: 897  AGTIGQQQTTGAQAPAPSLAIGTPGISASPLLAEFTGSDGAPGNALTIASGKSAAMEQPL 956

Query: 1253 ERLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1074
            ERLIK V+S+SPKA            SMIDRIAGSAPGNGSRAAVGEDLVAMT CRLQAR
Sbjct: 957  ERLIKVVKSMSPKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTNCRLQAR 1016

Query: 1073 NFMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKI 894
            NF++ DG + TKKMRR+TSAMPLN VSS  SV+DSFKQL             S +KR +I
Sbjct: 1017 NFITQDGVSGTKKMRRYTSAMPLNVVSSASSVSDSFKQLSGPETSDLESTATSCVKRPRI 1076

Query: 893  ETNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLK 723
            E NH LLEE+REIN RLIDTVV                 G   T+VKCSF+AVALSPNLK
Sbjct: 1077 EANHALLEEIREINQRLIDTVVDISEEDVDPTAAAAAFEGGEGTIVKCSFSAVALSPNLK 1136

Query: 722  SQYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLP 543
            SQYAS QMSPI PLRLLVP+NYPNCSPILLD LP+E SKE EDLSVKAK  FNI LR L 
Sbjct: 1137 SQYASAQMSPIQPLRLLVPANYPNCSPILLDNLPVEVSKEYEDLSVKAKSRFNISLRSLS 1196

Query: 542  QPISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            QP+SLG++A+TWDVCAR VI+++AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1197 QPMSLGDIAKTWDVCARAVISDHAQQSGGGSFSSKYGTWENCLSA 1241



 Score =  219 bits (559), Expect = 1e-53
 Identities = 135/275 (49%), Positives = 167/275 (60%), Gaps = 1/275 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L QPQRALPE SSTS+DSTAQTGH    DWQEEVYQKIK+MKEMYLPEL E+YQKI+ K 
Sbjct: 451  LYQPQRALPETSSTSLDSTAQTGHANGGDWQEEVYQKIKAMKEMYLPELNEMYQKISTKL 510

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQ K  + +EKLK+FK+MLER+I+FLQV K+NI P +KDKL  YEKQII  + 
Sbjct: 511  QQHDSLPQQSK-PEQLEKLKVFKAMLERIISFLQVSKNNILPGFKDKLGSYEKQIINFIN 569

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVN-SMQPMNMQGSVT 2343
            +NR +K                                   HEN +N  MQ MN+QGSV 
Sbjct: 570  TNRPRKST--------PSLQPGQIPQSHIQQPQSQVSQVQSHENQMNPQMQSMNLQGSVP 621

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
            +MQ   + + QH S  L +                 +SNLDSG G++M+SL Q  VGS+Q
Sbjct: 622  TMQQNNM-SLQHSS--LSSLSAASTSQQNMMNSLQPSSNLDSGQGNAMSSLQQATVGSVQ 678

Query: 2162 QNGVGPLQQNTINASQQTNMSALSQNNMNQSQPNV 2058
            QN V   QQ+ IN     N+S  SQN +N  QPN+
Sbjct: 679  QNPVSTPQQSNIN-----NLS--SQNGVNMLQPNI 706



 Score = 80.1 bits (196), Expect = 2e-11
 Identities = 47/96 (48%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = -3

Query: 4184 QVRNPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMS 4008
            Q  + GQ LPI LS NQSQTRQQLLP                       SV+GL Q ++S
Sbjct: 4    QGHSQGQSLPIPLSVNQSQTRQQLLPQNIQNNMPSTGVQGSATLTSALPSVSGLAQNSIS 63

Query: 4007 NVVGQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            NVV QN N+Q +PG+  NS  NS+GQGV SN+F NS
Sbjct: 64   NVVSQNPNMQNIPGVQQNSAANSMGQGVPSNIFANS 99


>ref|XP_010097158.1| hypothetical protein L484_025703 [Morus notabilis]
            gi|587878218|gb|EXB67225.1| hypothetical protein
            L484_025703 [Morus notabilis]
          Length = 1396

 Score =  511 bits (1316), Expect = e-141
 Identities = 281/464 (60%), Positives = 328/464 (70%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R    VKPG+F Q    G R    HQQLK  +PF++ S  L QA+SPQ+ Q
Sbjct: 933  MNDVNDMKMRQNMAVKPGVFQQHVPAGQRSAYPHQQLKTGSPFSVPSNHL-QASSPQVLQ 991

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLLS+L+K GTPL                    +PGDS+K  P ISS+ NA
Sbjct: 992  HSSPQVDQQNLLSSLTKAGTPLQSANSPFVVPSPSTPLAPSPMPGDSDKPVPGISSLPNA 1051

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAE-SSLDGNQGTAPTNISGKMSARERPLE 1251
            GN+G QQ + G+  A SLAI TPGISASPLLAE SS DG  G   +++SGK S  E+PL 
Sbjct: 1052 GNVGQQQASGGVAPAPSLAIGTPGISASPLLAEFSSPDGIHGNVLSSVSGKSSVTEQPLG 1111

Query: 1250 RLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 1071
            RLIKAV+S+SP A            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQ RN
Sbjct: 1112 RLIKAVKSMSPTALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQVRN 1171

Query: 1070 FMSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIE 891
            F++ DG+  T+KM+R+TSAMPLN VSS  S+NDSFKQ              S IKR KIE
Sbjct: 1172 FITQDGTNGTRKMKRYTSAMPLNVVSSASSINDSFKQFNGSETSELESTATSGIKRPKIE 1231

Query: 890  TNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG---TVVKCSFNAVALSPNLKS 720
             NH LLEE+REIN RLIDTVV                 G   T+VKCSF+AVALSPNLKS
Sbjct: 1232 ANHALLEEIREINQRLIDTVVDISDEDVDPSAAAAAVEGGEGTIVKCSFSAVALSPNLKS 1291

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS +MSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+ +LR L Q
Sbjct: 1292 QYASARMSPIQPLRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSKFSTFLRSLSQ 1351

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLG +ARTWDVCAR VI+E+AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1352 PMSLGAIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1395



 Score =  226 bits (577), Expect = 1e-55
 Identities = 126/213 (59%), Positives = 145/213 (68%), Gaps = 3/213 (1%)
 Frame = -3

Query: 4529 NWRPPQG-EPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRFE 4353
            NWRP QG EP MD  DWR QL P+SR RIVNKIM+TLK+HLP SG EGL EL+KIA RFE
Sbjct: 5    NWRPIQGGEPAMDAVDWRTQLQPDSRQRIVNKIMDTLKKHLPFSGQEGLHELKKIAERFE 64

Query: 4352 EKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQVR 4176
            EKIYTAATSQSDYLRKISLKMLTMETKSQ    NSLP+    N N PPDP S  +Q Q+ 
Sbjct: 65   EKIYTAATSQSDYLRKISLKMLTMETKSQNSIPNSLPTNPVSNNNRPPDPGSLGMQSQIH 124

Query: 4175 NPGQPLPISLS-NQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVV 3999
            N GQ L + L  NQSQTR QLLP                         + L+QT++ +VV
Sbjct: 125  NQGQSLAMPLQPNQSQTRPQLLPQNIQNSGGVQSSSTLSPALPPP---SSLSQTSIPSVV 181

Query: 3998 GQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            GQN N+Q MPG S N+V NS+GQGV +NM+ +S
Sbjct: 182  GQNPNMQNMPGTSQNTVGNSMGQGVPANMYASS 214



 Score =  205 bits (522), Expect = 2e-49
 Identities = 137/310 (44%), Positives = 165/310 (53%), Gaps = 27/310 (8%)
 Frame = -3

Query: 2894 QPSGALLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQK 2715
            Q    L Q QRA PE SSTS+DSTAQTGH  V D  +EVYQKIK+MKE YLPEL E+YQK
Sbjct: 553  QQKQQLYQSQRAPPETSSTSLDSTAQTGHANVSD--DEVYQKIKAMKEQYLPELNEMYQK 610

Query: 2714 IAIKCQQ--------------------------HDAVVQQPKQSDPIEKLKLFKSMLERM 2613
            IA K QQ                           D++ QQPK SD  EK+KLFK+MLER 
Sbjct: 611  IAAKLQQACPFFYLLQFIYTNKFASIFGNFRLIQDSLPQQPK-SDQYEKIKLFKTMLERA 669

Query: 2612 ITFLQVPKSNISPTYKDKLAQYEKQIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXX 2433
            ITFLQVPK +I P YKDKLA YEKQI+  + ++R +KP                      
Sbjct: 670  ITFLQVPKGSILPGYKDKLAHYEKQIVNFINTHRPRKPV-----SQLQQGQVSSTHMHTM 724

Query: 2432 XXXXXXXXXXXQHENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXX 2256
                        HEN +N  +Q MN QGSV +MQ   +T+ Q  S  + T  GV      
Sbjct: 725  QQPQSQIAQVHSHENQMNPQLQSMNAQGSVATMQQNNMTSLQQSS--ISTLSGVSTPQQN 782

Query: 2255 XXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSALSQNNMN 2076
                   NSN+DSG G+S+NSL Q  VGS+QQN V    Q  INA    N   + Q+++N
Sbjct: 783  VMNSLQPNSNMDSGQGNSLNSLQQVSVGSMQQNPVSAPPQGNINALSSQNGMNVLQSSIN 842

Query: 2075 QSQPNVSSLQ 2046
              QPN   LQ
Sbjct: 843  TLQPNSGMLQ 852


>ref|XP_008218603.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            [Prunus mume] gi|645215901|ref|XP_008218611.1| PREDICTED:
            mediator of RNA polymerase II transcription subunit 15a
            [Prunus mume]
          Length = 1355

 Score =  511 bits (1316), Expect = e-141
 Identities = 288/461 (62%), Positives = 328/461 (71%), Gaps = 2/461 (0%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAISSPQLLQATSPQLSQ 1605
            ++++ND K+R G GVKPG+F Q HL   +    H  LK  +PF  +  QLLQA SPQ+SQ
Sbjct: 902  MNDVNDLKMRQGMGVKPGVFQQ-HLSAGQRAYPHPPLKSGSPFPTN--QLLQAASPQISQ 958

Query: 1604 HSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISNA 1428
            HSSPQ+DQQNLL++  K GTPL                    +PGDSEK     SS+SNA
Sbjct: 959  HSSPQVDQQNLLTH-PKAGTPLQTASSPFVIPSPSTPMAPSPMPGDSEKP----SSLSNA 1013

Query: 1427 GNIGHQQTAHGLTQAQSLAIATPGISASPLLAESSLDGNQGTAPTNISGKMSARERPLER 1248
            GN+GHQQT     Q QSLAI TPGISASPLLAE S+      A + ISGK S  E+PLER
Sbjct: 1014 GNVGHQQTTGVGAQVQSLAIGTPGISASPLLAEFSVPDTHVNALSTISGKSSVTEQPLER 1073

Query: 1247 LIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNF 1068
            LIKAV+S+SP A            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARN 
Sbjct: 1074 LIKAVKSMSPNALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNV 1133

Query: 1067 MSHDGSAATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHKIET 888
            M+HDG+  T+KMRR+TSA+PLN VSS GS+NDSFKQL             SRIKR +IE 
Sbjct: 1134 MTHDGTNGTRKMRRYTSAVPLNVVSSAGSMNDSFKQLTSSETSDLESTATSRIKRPRIEA 1193

Query: 887  NHTLLEEVREINHRLIDTVV-XXXXXXXXXXXXXXXXXGTVVKCSFNAVALSPNLKSQYA 711
            NH LLEE+REIN RLIDTVV                  GT+VKCSF+AVALSPNLKSQYA
Sbjct: 1194 NHALLEEIREINRRLIDTVVNISDEDVDPSAAAAEGGEGTIVKCSFDAVALSPNLKSQYA 1253

Query: 710  SPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQPIS 531
            S QMSPI PLRLLVP NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR + QP+S
Sbjct: 1254 SAQMSPIQPLRLLVPMNYPNCSPILLDKFPVEVSKEYEDLSVKAKSKFSISLRSISQPMS 1313

Query: 530  LGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            LGE+ARTWDVCAR VI+E+AQQSGGGSFSS+YGTWENC+SA
Sbjct: 1314 LGEIARTWDVCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1354



 Score =  216 bits (550), Expect = 1e-52
 Identities = 131/285 (45%), Positives = 174/285 (61%), Gaps = 2/285 (0%)
 Frame = -3

Query: 2879 LLQPQRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMKEMYLPELTELYQKIAIKC 2700
            L Q QR LPE SSTS+DSTAQTGH    DWQEEV+QKIK MKEMYLPEL+E+YQKIA K 
Sbjct: 556  LYQSQRPLPETSSTSLDSTAQTGHATGGDWQEEVFQKIKVMKEMYLPELSEMYQKIATKL 615

Query: 2699 QQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISPTYKDKLAQYEKQIIGVLT 2520
            QQHD++ QQPK S+ ++KLK+F++MLER+I+ LQ+ KSNISP  K+KL  YEKQI+  + 
Sbjct: 616  QQHDSLPQQPK-SEQLDKLKMFRTMLERLISVLQISKSNISPGLKEKLLLYEKQIVNFIN 674

Query: 2519 SNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHENLVN-SMQPMNMQGSVT 2343
            +NR +KP                                  HEN +N  +Q MN+QGSV 
Sbjct: 675  TNRPRKPV-----SSLQQGQLPPPHMHSMQQSQSQITQVQSHENQMNPQLQSMNLQGSVA 729

Query: 2342 SMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDSGPGHSMNSLPQGVVGSLQ 2163
             MQ + +T+ Q  SM   +  GV             +S++DSG G+++N        SLQ
Sbjct: 730  PMQPSNMTSLQQSSMSALS--GVSTAQQNMMNSLPPSSSMDSGQGNALN--------SLQ 779

Query: 2162 QNGVGPLQQNTINASQQTNMSAL-SQNNMNQSQPNVSSLQTTSNI 2031
            Q  VG  QQ  ++A QQ NM+AL SQ+ +N  Q N++S+Q+ S +
Sbjct: 780  QVPVGSNQQTPVSAPQQANMNALSSQSGVNMLQANMNSIQSNSGM 824



 Score =  210 bits (535), Expect = 8e-51
 Identities = 123/213 (57%), Positives = 137/213 (64%), Gaps = 3/213 (1%)
 Frame = -3

Query: 4529 NWRPPQ-GEPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRFE 4353
            NWRPPQ GE  MD GDWR+QL P+SR RIVNKIM+TLKRHLP SG EGL EL+KIAVRFE
Sbjct: 5    NWRPPQVGEAPMDAGDWRSQLQPDSRQRIVNKIMDTLKRHLPFSGHEGLQELKKIAVRFE 64

Query: 4352 EKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQVR 4176
            EKIYTAATSQSDYLRKISLKMLTMETKSQ   +NSL S + GN N P DP S  +Q QV 
Sbjct: 65   EKIYTAATSQSDYLRKISLKMLTMETKSQNTMANSLQSNSAGNSNRPHDPGSFGMQPQVP 124

Query: 4175 NPGQPLPISL-SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVV 3999
            N GQ L + L +NQ   RQQLL                          +GLTQT + ++V
Sbjct: 125  NQGQSLSMPLPANQPVARQQLLSQNIQNNIPAAGVQSSAGLSSALPPSSGLTQTPIPSIV 184

Query: 3998 GQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            GQN N+Q M            GQGV SNMF  S
Sbjct: 185  GQNQNMQNM------------GQGVPSNMFATS 205


>ref|XP_011461616.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X2 [Fragaria vesca subsp. vesca]
          Length = 1344

 Score =  510 bits (1314), Expect = e-141
 Identities = 292/464 (62%), Positives = 331/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAI-SSPQLLQATSPQLS 1608
            IS++ND K+RPG GVKPG F Q   VG R    HQQLK ++P+ + SS QLLQA SPQLS
Sbjct: 888  ISDVNDVKIRPGMGVKPGSFQQHMSVGQRAYP-HQQLKSASPYPVTSSNQLLQAQSPQLS 946

Query: 1607 QHSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISN 1431
            QHSSPQ+DQQ L+    K GTPL                    +PG+SEK     SS+SN
Sbjct: 947  QHSSPQVDQQLLVP---KAGTPLQNASSPFVIPSPPTPMAPSPMPGESEKP----SSLSN 999

Query: 1430 AGNIGHQQTAHGLTQAQSLAIATPGISASPLLAES-SLDGNQGTAPTNISGKMSARERPL 1254
            AGN+GHQ TA    Q QSLAI TPGISASPLLAE    DG    A + ISGK S  E+PL
Sbjct: 1000 AGNVGHQPTAGVGAQVQSLAIGTPGISASPLLAEFIGPDGTHANALSTISGKSSVTEQPL 1059

Query: 1253 ERLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1074
            ERLIKAV+SIS KA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR
Sbjct: 1060 ERLIKAVKSISTKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1119

Query: 1073 NFMSHDGSA-ATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHK 897
            NF++HDG+   T+KMRR+TSAMPLN VSS GS+NDSFKQL             SRIKR +
Sbjct: 1120 NFITHDGTTNGTRKMRRYTSAMPLNVVSSGGSMNDSFKQLTGSETSDLESTATSRIKRPR 1179

Query: 896  IETNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG-TVVKCSFNAVALSPNLKS 720
            IE NH L+EE+REIN RLIDTVV                   T+VKCSF+AVALSPNLKS
Sbjct: 1180 IEANHALMEEIREINRRLIDTVVDISDEDVDPSAAAAERGEGTIVKCSFDAVALSPNLKS 1239

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR + Q
Sbjct: 1240 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSRFSICLRSISQ 1299

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWD+CAR VI+E+AQ+SGGGSFSS+YGTWENC+SA
Sbjct: 1300 PMSLGEIARTWDICARAVISEHAQRSGGGSFSSKYGTWENCLSA 1343



 Score =  241 bits (615), Expect = 4e-60
 Identities = 132/213 (61%), Positives = 149/213 (69%), Gaps = 3/213 (1%)
 Frame = -3

Query: 4529 NWRPPQG-EPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRFE 4353
            NWRPP G EP MD GDWR+QL  +SR RIVNKIM+TLKRHLP SG EGL EL+KIAVRFE
Sbjct: 5    NWRPPPGGEPAMDAGDWRSQLQADSRQRIVNKIMDTLKRHLPFSGQEGLHELKKIAVRFE 64

Query: 4352 EKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQVR 4176
            EKIYTAATSQSDYLRKISLKMLTME+KSQ    NSLPS + GN N PPDP S  +Q Q  
Sbjct: 65   EKIYTAATSQSDYLRKISLKMLTMESKSQNTMGNSLPSNSAGNSNRPPDPGSFGMQAQAP 124

Query: 4175 NPGQPLPISL-SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVV 3999
            N GQ L + + +NQSQTRQQLL                          +GLTQT + N+V
Sbjct: 125  NQGQSLSMPVQANQSQTRQQLLSQNIQNNIPPTGVQNSAGLSSALPPASGLTQTPIPNMV 184

Query: 3998 GQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            GQ++NLQ M G S NS+ NS+GQGV SNMF NS
Sbjct: 185  GQSANLQSMSGTSQNSLGNSMGQGVASNMFANS 217



 Score =  201 bits (510), Expect = 6e-48
 Identities = 134/303 (44%), Positives = 168/303 (55%), Gaps = 15/303 (4%)
 Frame = -3

Query: 2894 QPSGALLQP-------------QRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMK 2754
            Q SG++LQP             QR LPE SS   +STAQT      DWQEE YQKIK MK
Sbjct: 539  QVSGSMLQPPNVMEQQKQLYQAQRPLPETSS---NSTAQTA-----DWQEEAYQKIKVMK 590

Query: 2753 EMYLPELTELYQKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISP 2574
            EMY PEL+E+YQKIA K  QHD++ QQPK S+ +EKLK+FK+MLER+IT LQ+ KSNISP
Sbjct: 591  EMYYPELSEMYQKIAAKLHQHDSLPQQPK-SEQLEKLKMFKAMLERLITVLQISKSNISP 649

Query: 2573 TYKDKLAQYEKQIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQH 2394
              KDKL  YEKQI+  + +NR +KP                                  H
Sbjct: 650  GMKDKLGVYEKQIVNFINTNRPRKPV-----STLQPGQLPPPHMQSMQQSQSQITQVQSH 704

Query: 2393 ENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDS 2217
            EN +N  +Q MN+QGSV +MQ   +T  Q  SM   +  GV             +SN+D 
Sbjct: 705  ENQMNPQLQSMNLQGSVPTMQQNNMTGLQQNSM--SSLSGVSTAQQNMMNPLQPSSNMDP 762

Query: 2216 GPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSAL-SQNNMNQSQPNVSSLQTT 2040
            G G S+N        SLQQ  VG +QQ  ++A QQ NM+AL SQN +N  Q N++ LQ+ 
Sbjct: 763  GQGTSLN--------SLQQVPVGSIQQTPVSAPQQANMNALSSQNGVNMLQNNINPLQSN 814

Query: 2039 SNI 2031
              I
Sbjct: 815  PGI 817


>ref|XP_011461615.1| PREDICTED: mediator of RNA polymerase II transcription subunit 15a
            isoform X1 [Fragaria vesca subsp. vesca]
          Length = 1347

 Score =  510 bits (1314), Expect = e-141
 Identities = 292/464 (62%), Positives = 331/464 (71%), Gaps = 5/464 (1%)
 Frame = -3

Query: 1784 ISEMNDFKVRPGAGVKPGLFPQTHLVGPRPTQYHQQLKPSAPFAI-SSPQLLQATSPQLS 1608
            IS++ND K+RPG GVKPG F Q   VG R    HQQLK ++P+ + SS QLLQA SPQLS
Sbjct: 891  ISDVNDVKIRPGMGVKPGSFQQHMSVGQRAYP-HQQLKSASPYPVTSSNQLLQAQSPQLS 949

Query: 1607 QHSSPQIDQQNLLSNLSKVGTPLXXXXXXXXXXXXXXXXXSV-IPGDSEKQAPAISSISN 1431
            QHSSPQ+DQQ L+    K GTPL                    +PG+SEK     SS+SN
Sbjct: 950  QHSSPQVDQQLLVP---KAGTPLQNASSPFVIPSPPTPMAPSPMPGESEKP----SSLSN 1002

Query: 1430 AGNIGHQQTAHGLTQAQSLAIATPGISASPLLAES-SLDGNQGTAPTNISGKMSARERPL 1254
            AGN+GHQ TA    Q QSLAI TPGISASPLLAE    DG    A + ISGK S  E+PL
Sbjct: 1003 AGNVGHQPTAGVGAQVQSLAIGTPGISASPLLAEFIGPDGTHANALSTISGKSSVTEQPL 1062

Query: 1253 ERLIKAVRSISPKAFXXXXXXXXXXXSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1074
            ERLIKAV+SIS KA            SMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR
Sbjct: 1063 ERLIKAVKSISTKALSASVSDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQAR 1122

Query: 1073 NFMSHDGSA-ATKKMRRHTSAMPLNAVSSVGSVNDSFKQLXXXXXXXXXXXXXSRIKRHK 897
            NF++HDG+   T+KMRR+TSAMPLN VSS GS+NDSFKQL             SRIKR +
Sbjct: 1123 NFITHDGTTNGTRKMRRYTSAMPLNVVSSGGSMNDSFKQLTGSETSDLESTATSRIKRPR 1182

Query: 896  IETNHTLLEEVREINHRLIDTVVXXXXXXXXXXXXXXXXXG-TVVKCSFNAVALSPNLKS 720
            IE NH L+EE+REIN RLIDTVV                   T+VKCSF+AVALSPNLKS
Sbjct: 1183 IEANHALMEEIREINRRLIDTVVDISDEDVDPSAAAAERGEGTIVKCSFDAVALSPNLKS 1242

Query: 719  QYASPQMSPILPLRLLVPSNYPNCSPILLDKLPIEPSKESEDLSVKAKMTFNIYLRGLPQ 540
            QYAS QMSPI PLRLLVP+NYPNCSPILLDK P+E SKE EDLSVKAK  F+I LR + Q
Sbjct: 1243 QYASAQMSPIQPLRLLVPTNYPNCSPILLDKFPVEVSKEYEDLSVKAKSRFSICLRSISQ 1302

Query: 539  PISLGEMARTWDVCARKVIAEYAQQSGGGSFSSRYGTWENCVSA 408
            P+SLGE+ARTWD+CAR VI+E+AQ+SGGGSFSS+YGTWENC+SA
Sbjct: 1303 PMSLGEIARTWDICARAVISEHAQRSGGGSFSSKYGTWENCLSA 1346



 Score =  241 bits (615), Expect = 4e-60
 Identities = 132/213 (61%), Positives = 149/213 (69%), Gaps = 3/213 (1%)
 Frame = -3

Query: 4529 NWRPPQG-EPTMDGGDWRNQLMPESRHRIVNKIMETLKRHLPISGPEGLVELRKIAVRFE 4353
            NWRPP G EP MD GDWR+QL  +SR RIVNKIM+TLKRHLP SG EGL EL+KIAVRFE
Sbjct: 5    NWRPPPGGEPAMDAGDWRSQLQADSRQRIVNKIMDTLKRHLPFSGQEGLHELKKIAVRFE 64

Query: 4352 EKIYTAATSQSDYLRKISLKMLTMETKSQGGASNSLPSITGGNQN-PPDPASQSLQQQVR 4176
            EKIYTAATSQSDYLRKISLKMLTME+KSQ    NSLPS + GN N PPDP S  +Q Q  
Sbjct: 65   EKIYTAATSQSDYLRKISLKMLTMESKSQNTMGNSLPSNSAGNSNRPPDPGSFGMQAQAP 124

Query: 4175 NPGQPLPISL-SNQSQTRQQLLPXXXXXXXXXXXXXXXXXXXXXXXSVTGLTQTTMSNVV 3999
            N GQ L + + +NQSQTRQQLL                          +GLTQT + N+V
Sbjct: 125  NQGQSLSMPVQANQSQTRQQLLSQNIQNNIPPTGVQNSAGLSSALPPASGLTQTPIPNMV 184

Query: 3998 GQNSNLQPMPGISHNSVNNSVGQGVQSNMFPNS 3900
            GQ++NLQ M G S NS+ NS+GQGV SNMF NS
Sbjct: 185  GQSANLQSMSGTSQNSLGNSMGQGVASNMFANS 217



 Score =  212 bits (540), Expect = 2e-51
 Identities = 137/303 (45%), Positives = 171/303 (56%), Gaps = 15/303 (4%)
 Frame = -3

Query: 2894 QPSGALLQP-------------QRALPEASSTSMDSTAQTGHVGVVDWQEEVYQKIKSMK 2754
            Q SG++LQP             QR LPE SSTS+DSTAQT      DWQEE YQKIK MK
Sbjct: 539  QVSGSMLQPPNVMEQQKQLYQAQRPLPETSSTSLDSTAQTA-----DWQEEAYQKIKVMK 593

Query: 2753 EMYLPELTELYQKIAIKCQQHDAVVQQPKQSDPIEKLKLFKSMLERMITFLQVPKSNISP 2574
            EMY PEL+E+YQKIA K  QHD++ QQPK S+ +EKLK+FK+MLER+IT LQ+ KSNISP
Sbjct: 594  EMYYPELSEMYQKIAAKLHQHDSLPQQPK-SEQLEKLKMFKAMLERLITVLQISKSNISP 652

Query: 2573 TYKDKLAQYEKQIIGVLTSNRHKKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQH 2394
              KDKL  YEKQI+  + +NR +KP                                  H
Sbjct: 653  GMKDKLGVYEKQIVNFINTNRPRKPV-----STLQPGQLPPPHMQSMQQSQSQITQVQSH 707

Query: 2393 ENLVN-SMQPMNMQGSVTSMQSTAVTNSQHGSMPLPTHMGVXXXXXXXXXXXXXNSNLDS 2217
            EN +N  +Q MN+QGSV +MQ   +T  Q  SM   +  GV             +SN+D 
Sbjct: 708  ENQMNPQLQSMNLQGSVPTMQQNNMTGLQQNSM--SSLSGVSTAQQNMMNPLQPSSNMDP 765

Query: 2216 GPGHSMNSLPQGVVGSLQQNGVGPLQQNTINASQQTNMSAL-SQNNMNQSQPNVSSLQTT 2040
            G G S+N        SLQQ  VG +QQ  ++A QQ NM+AL SQN +N  Q N++ LQ+ 
Sbjct: 766  GQGTSLN--------SLQQVPVGSIQQTPVSAPQQANMNALSSQNGVNMLQNNINPLQSN 817

Query: 2039 SNI 2031
              I
Sbjct: 818  PGI 820