BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00004042
         (1060 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su...   255   3e-65
ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II su...   254   6e-65
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor...   254   1e-64
ref|XP_006847979.1| PREDICTED: DNA-directed RNA polymerase II su...   253   1e-64
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su...   253   2e-64
ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II su...   253   2e-64
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu...   253   2e-64
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   251   5e-64
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr...   251   6e-64
ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II su...   250   1e-63
ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Caps...   249   2e-63
ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II su...   249   2e-63
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri...   249   3e-63
ref|XP_010520027.1| PREDICTED: DNA-directed RNA polymerase II su...   248   5e-63
ref|XP_010422922.1| PREDICTED: DNA-directed RNA polymerase II su...   248   5e-63
ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II su...   248   7e-63
ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II su...   248   7e-63
ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II su...   247   9e-63
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527...   247   9e-63
gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [A...   247   1e-62

>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
           raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Gossypium
           raimondii] gi|763770918|gb|KJB38133.1| hypothetical
           protein B456_006G238100 [Gossypium raimondii]
           gi|763804330|gb|KJB71268.1| hypothetical protein
           B456_011G113800 [Gossypium raimondii]
           gi|763804331|gb|KJB71269.1| hypothetical protein
           B456_011G113800 [Gossypium raimondii]
          Length = 138

 Score =  255 bits (652), Expect = 3e-65
 Identities = 126/138 (91%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFLKAKCLMNCEVALIL+ KYEQLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIE+ML+DLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138


>ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Nelumbo nucifera]
          Length = 138

 Score =  254 bits (650), Expect = 6e-65
 Identities = 126/138 (91%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRMHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DD IEKML DLSLIKKFE
Sbjct: 121 DDQIEKMLTDLSLIKKFE 138


>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|590707933|ref|XP_007048136.1| RNA polymerase II,
           Rpb4, core protein isoform 1 [Theobroma cacao]
           gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
           gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
           core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score =  254 bits (648), Expect = 1e-64
 Identities = 125/138 (90%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFLKAKCLMNCEVALIL+ KYEQLQQMS+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIE+ML+DLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138


>ref|XP_006847979.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Amborella
           trichopoda] gi|769807577|ref|XP_011624688.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Amborella
           trichopoda] gi|548851284|gb|ERN09560.1| hypothetical
           protein AMTR_s00029p00159420 [Amborella trichopoda]
          Length = 139

 Score =  253 bits (647), Expect = 1e-64
 Identities = 127/139 (91%), Positives = 136/139 (97%), Gaps = 1/139 (0%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFLKAKCLMNCEVALILD KYEQLQQMSDDP NQISQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDHKYEQLQQMSDDPSNQISQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGR-NH 466
           YVKRFSRYKNPDAVRQVRE+LSRN+LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR N+
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRNQLAEFELCVLGNLCPETVEEAIAMVPSIKAKGRSNN 120

Query: 465 DDDAIEKMLHDLSLIKKFE 409
           DDDAIEKML+DL+LIKKFE
Sbjct: 121 DDDAIEKMLNDLALIKKFE 139


>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
           curcas]
          Length = 138

 Score =  253 bits (645), Expect = 2e-64
 Identities = 124/138 (89%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENA+ELK+G+EFLKAKCLMNCEVALIL+ KYEQLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_010940283.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
           guineensis]
          Length = 138

 Score =  253 bits (645), Expect = 2e-64
 Identities = 126/138 (91%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFLKAKCLMNCEVALILDRKYEQLQQ+SDDP NQISQVFEKS+Q
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKN DAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+KSKGR H+
Sbjct: 61  YVKRFSRYKNQDAVRQVREILSRYRLAEFELCVLGNLCPETVEEAIAMVPSIKSKGRIHE 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIEKML+DLSLIKKFE
Sbjct: 121 DDAIEKMLNDLSLIKKFE 138


>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Populus euphratica]
           gi|222853507|gb|EEE91054.1| hypothetical protein
           POPTR_0007s06660g [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| hypothetical protein
           POPTR_0005s08690g [Populus trichocarpa]
          Length = 138

 Score =  253 bits (645), Expect = 2e-64
 Identities = 124/138 (89%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G++FLKAKCLMNCEVALIL+ KYEQLQQMSDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
           vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  251 bits (642), Expect = 5e-64
 Identities = 123/138 (89%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEVA+IL+ KYEQLQQMSDDP+NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
           gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4-like isoform X2 [Citrus
           sinensis] gi|557530000|gb|ESR41250.1| hypothetical
           protein CICLE_v10026735mg [Citrus clementina]
          Length = 138

 Score =  251 bits (641), Expect = 6e-64
 Identities = 123/138 (89%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEVA+ILD KYEQLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_010271756.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Nelumbo
           nucifera]
          Length = 138

 Score =  250 bits (638), Expect = 1e-63
 Identities = 121/138 (87%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEE+ENAAELK+G+EFLKAKCLMNCEV+LILDR+YEQLQQMSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEDENAAELKIGDEFLKAKCLMNCEVSLILDRRYEQLQQMSDDPTNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR+KLAEFELCVLGNLCPETVEEALAMVPS+K++GR H+
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHKLAEFELCVLGNLCPETVEEALAMVPSIKTRGRTHE 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+ I+KML+DLSLIKKFE
Sbjct: 121 DEEIDKMLNDLSLIKKFE 138


>ref|XP_006288864.1| hypothetical protein CARUB_v10002229mg [Capsella rubella]
           gi|482557570|gb|EOA21762.1| hypothetical protein
           CARUB_v10002229mg [Capsella rubella]
          Length = 138

 Score =  249 bits (637), Expect = 2e-63
 Identities = 121/138 (87%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEV+LIL+ KYEQLQQ+S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR++L EFELCVLGNLCPETVEEA+AMVPSLK+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIEKML+DLSL+K+FE
Sbjct: 121 DDAIEKMLNDLSLVKRFE 138


>ref|XP_008813022.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
           [Phoenix dactylifera]
          Length = 138

 Score =  249 bits (636), Expect = 2e-63
 Identities = 124/138 (89%), Positives = 133/138 (96%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFL+AKCLMNCEVALILDRKYEQLQQ+SDDP NQISQVFEKS+Q
Sbjct: 1   MSGEEEENAAELKIGEEFLRAKCLMNCEVALILDRKYEQLQQLSDDPTNQISQVFEKSMQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKN DAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K KGR H+
Sbjct: 61  YVKRFSRYKNQDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKRKGRIHE 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIEKML+DLSLIKKFE
Sbjct: 121 DDAIEKMLNDLSLIKKFE 138


>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 138

 Score =  249 bits (635), Expect = 3e-63
 Identities = 122/138 (88%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENA+ELK+G+EFLKAKCLMNCEVALIL+ KYEQLQQMS+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML DLS+IKKFE
Sbjct: 121 DEAIEKMLTDLSMIKKFE 138


>ref|XP_010520027.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Tarenaya
           hassleriana]
          Length = 138

 Score =  248 bits (633), Expect = 5e-63
 Identities = 122/138 (88%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEVALIL+ KYEQLQQ+S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQISEDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +L EFELCVLGNLCPETVEEA+AMVPSLK+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRVHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138


>ref|XP_010422922.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Camelina
           sativa] gi|727561519|ref|XP_010453003.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Camelina
           sativa] gi|727640617|ref|XP_010491637.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Camelina
           sativa]
          Length = 138

 Score =  248 bits (633), Expect = 5e-63
 Identities = 120/138 (86%), Positives = 135/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEV+LIL+ KYEQLQQ+S+DPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQVSEDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR++L EFELCVLGNLCPETVEEA+AMVPSLK+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRHQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSL+K+FE
Sbjct: 121 DEAIEKMLNDLSLVKRFE 138


>ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
           indicum] gi|747083277|ref|XP_011088998.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Sesamum
           indicum]
          Length = 138

 Score =  248 bits (632), Expect = 7e-63
 Identities = 122/138 (88%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+ +EFLKAKCLMNCEVALIL+ KYEQLQQM+DDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIPDEFLKAKCLMNCEVALILEHKYEQLQQMADDPMNQMSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREILSR +LAEFELCVLGNLCPETVEEA+AMVPS+K++GR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>ref|XP_004138390.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cucumis
           sativus] gi|659113879|ref|XP_008456795.1| PREDICTED:
           DNA-directed RNA polymerase II subunit 4 [Cucumis melo]
           gi|778709725|ref|XP_011656444.1| PREDICTED: DNA-directed
           RNA polymerase II subunit 4 [Cucumis sativus]
           gi|700190641|gb|KGN45845.1| hypothetical protein
           Csa_6G014650 [Cucumis sativus]
          Length = 138

 Score =  248 bits (632), Expect = 7e-63
 Identities = 121/138 (87%), Positives = 134/138 (97%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEV+LIL+ KYEQLQQMS+DP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSEDPTNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVRE+LSR +LAEFELCVLGNLCPETVEEA+AMVPSLK+KGR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRYQLAEFELCVLGNLCPETVEEAIAMVPSLKTKGRVHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138


>ref|XP_009398052.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Musa acuminata
           subsp. malaccensis]
          Length = 138

 Score =  247 bits (631), Expect = 9e-63
 Identities = 123/138 (89%), Positives = 131/138 (94%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+GEEFLKAKCLMNCEVA ILD KY+QLQQ SDDP NQISQVFEKS+Q
Sbjct: 1   MSGEEEENAAELKIGEEFLKAKCLMNCEVARILDHKYDQLQQTSDDPTNQISQVFEKSMQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVRE+LSR KLAEFELCVLGNLCPETVEEA+A+VPS+KSKGR  +
Sbjct: 61  YVKRFSRYKNPDAVRQVREVLSRYKLAEFELCVLGNLCPETVEEAIAIVPSIKSKGRMLE 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           DDAIEKMLHDLSLIKKFE
Sbjct: 121 DDAIEKMLHDLSLIKKFE 138


>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
           max] gi|734406707|gb|KHN34054.1| DNA-directed RNA
           polymerase II subunit RPB4 [Glycine soja]
          Length = 138

 Score =  247 bits (631), Expect = 9e-63
 Identities = 122/138 (88%), Positives = 133/138 (96%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEVALIL+ KYEQLQQ SDDPMNQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVREIL+R +LAEFELCVLGNLCPETVEEA+AMVPS+KS+GR  D
Sbjct: 61  YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+DLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138


>gb|ABQ32301.1| putative 15.9 kDa subunit of RNA polymerase II [Artemisia annua]
          Length = 138

 Score =  247 bits (630), Expect = 1e-62
 Identities = 120/138 (86%), Positives = 133/138 (96%)
 Frame = -2

Query: 822 MSGEEEENAAELKLGEEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQISQVFEKSLQ 643
           MSGEEEENAAELK+G+EFLKAKCLMNCEV+LILD K EQLQ MSDDP NQ+SQVFEKSLQ
Sbjct: 1   MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKLEQLQAMSDDPSNQVSQVFEKSLQ 60

Query: 642 YVKRFSRYKNPDAVRQVREILSRNKLAEFELCVLGNLCPETVEEALAMVPSLKSKGRNHD 463
           YVKRFSRYKNPDAVRQVRE+LSR++LAEFELCVLGNLCPETVEEA+AMVPS+KS+GR HD
Sbjct: 61  YVKRFSRYKNPDAVRQVRELLSRHQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRGHD 120

Query: 462 DDAIEKMLHDLSLIKKFE 409
           D+AIEKML+D+SLIKKFE
Sbjct: 121 DEAIEKMLNDMSLIKKFE 138