BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00003584
         (2495 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]              827   0.0  
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   827   0.0  
ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron sp...   826   0.0  
ref|XP_008793802.1| PREDICTED: chloroplastic group IIA intron sp...   812   0.0  
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun...   808   0.0  
ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron sp...   806   0.0  
ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron sp...   806   0.0  
ref|XP_008793805.1| PREDICTED: chloroplastic group IIA intron sp...   805   0.0  
ref|XP_009419882.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron sp...   798   0.0  
ref|XP_010100925.1| Chloroplastic group IIA intron splicing faci...   793   0.0  
ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   790   0.0  
ref|XP_011625144.1| PREDICTED: chloroplastic group IIA intron sp...   777   0.0  
ref|XP_011625143.1| PREDICTED: chloroplastic group IIA intron sp...   777   0.0  
ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron sp...   775   0.0  
emb|CDP02160.1| unnamed protein product [Coffea canephora]            774   0.0  
ref|XP_002517407.1| conserved hypothetical protein [Ricinus comm...   771   0.0  
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   771   0.0  
ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron sp...   770   0.0  
ref|XP_012082320.1| PREDICTED: chloroplastic group IIA intron sp...   770   0.0  

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  827 bits (2137), Expect = 0.0
 Identities = 428/696 (61%), Positives = 523/696 (75%), Gaps = 8/696 (1%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFL---EETKETHHPVTGSGSAGEIF 2073
            P K + R S     D +T+ KTAIQRIAEKLR+LG++   E  K        +GSAGEIF
Sbjct: 62   PSKFILRAS---NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIF 118

Query: 2072 IPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKR 1893
            +P P+QLP  R+GHTID SWS P NPVPEPG+G  ITR+HE++ E++++K++       R
Sbjct: 119  VPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLV------R 172

Query: 1892 RKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKI 1713
            ++    PT+AELT+P              RKK+ VGKAGITEGIVNGIHERWRR+EVVKI
Sbjct: 173  KEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKI 232

Query: 1712 KCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDY 1533
            +CED+C++NMKRTH+ LERKTGGLV+WRSGS I+LYRGANY+YPYFLSDN+  +    D 
Sbjct: 233  RCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDA 292

Query: 1532 ISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLAS-SLVSGVGSPKKVRFILPGEV 1356
             S     N++    EV +S G    KS   P+ +N++A  SL+ GVG P +VRF LPGE 
Sbjct: 293  SSDSQMNNEEHDGKEVCSS-GKGDVKS-AGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1355 QLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREM 1176
            QLEE+ADRLLDGLGPRFTDWWGY+PLP+DADLL  +VPGYR+PFRLLPYG+KPKLT+ EM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1175 TVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELK 996
            TVLRRLGRPL CHFALGRNR LQGLA S++KLWEKCEIAKIAVKRGVQNTNS++MAEELK
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 995  QLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMD----SGSSVKAT 828
             LTGGTL+SRDREFIV YRGKDFLPPAVS+AIE RR +G H GK ++D    + ++ ++ 
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 827  VTPTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXX 648
            +  +EH    +     DQK    S++R LR  +A V+  +                    
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 647  XXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELV 468
                 P +PE+DKEGITEEERYMLRKVGLRM  +LL+GRRG+FDGT+ENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 467  KVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLN 288
            K+IS  +S ED++ +ARTLEAESGGILVAVERVSKG+AII+YRGKNYKRP  LRP+TLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 287  KRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLV 180
            KR+A+ RSL+AQRRESLKLHVL+LT+NI+ +K QLV
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLV 746


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Vitis vinifera]
            gi|731419290|ref|XP_010660972.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Vitis vinifera]
          Length = 1044

 Score =  827 bits (2137), Expect = 0.0
 Identities = 428/696 (61%), Positives = 523/696 (75%), Gaps = 8/696 (1%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFL---EETKETHHPVTGSGSAGEIF 2073
            P K + R S     D +T+ KTAIQRIAEKLR+LG++   E  K        +GSAGEIF
Sbjct: 62   PSKFILRAS---NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIF 118

Query: 2072 IPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKR 1893
            +P P+QLP  R+GHTID SWS P NPVPEPG+G  ITR+HE++ E++++K++       R
Sbjct: 119  VPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLV------R 172

Query: 1892 RKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKI 1713
            ++    PT+AELT+P              RKK+ VGKAGITEGIVNGIHERWRR+EVVKI
Sbjct: 173  KEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKI 232

Query: 1712 KCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDY 1533
            +CED+C++NMKRTH+ LERKTGGLV+WRSGS I+LYRGANY+YPYFLSDN+  +    D 
Sbjct: 233  RCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDA 292

Query: 1532 ISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLAS-SLVSGVGSPKKVRFILPGEV 1356
             S     N++    EV +S G    KS   P+ +N++A  SL+ GVG P +VRF LPGE 
Sbjct: 293  SSDSQMNNEEHDGKEVCSS-GKGDVKS-AGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1355 QLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREM 1176
            QLEE+ADRLLDGLGPRFTDWWGY+PLP+DADLL  +VPGYR+PFRLLPYG+KPKLT+ EM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1175 TVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELK 996
            TVLRRLGRPL CHFALGRNR LQGLA S++KLWEKCEIAKIAVKRGVQNTNS++MAEELK
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 995  QLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMD----SGSSVKAT 828
             LTGGTL+SRDREFIV YRGKDFLPPAVS+AIE RR +G H GK ++D    + ++ ++ 
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 827  VTPTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXX 648
            +  +EH    +     DQK    S++R LR  +A V+  +                    
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 647  XXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELV 468
                 P +PE+DKEGITEEERYMLRKVGLRM  +LL+GRRG+FDGT+ENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 467  KVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLN 288
            K+IS  +S ED++ +ARTLEAESGGILVAVERVSKG+AII+YRGKNYKRP  LRP+TLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 287  KRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLV 180
            KR+A+ RSL+AQRRESLKLHVL+LT+NI+ +K QLV
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQLV 746


>ref|XP_010660973.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Vitis vinifera]
          Length = 1044

 Score =  826 bits (2133), Expect = 0.0
 Identities = 427/695 (61%), Positives = 522/695 (75%), Gaps = 8/695 (1%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFL---EETKETHHPVTGSGSAGEIF 2073
            P K + R S     D +T+ KTAIQRIAEKLR+LG++   E  K        +GSAGEIF
Sbjct: 62   PSKFILRAS---NPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAGEIF 118

Query: 2072 IPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKR 1893
            +P P+QLP  R+GHTID SWS P NPVPEPG+G  ITR+HE++ E++++K++       R
Sbjct: 119  VPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGVITRFHELRKEVKREKKLV------R 172

Query: 1892 RKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKI 1713
            ++    PT+AELT+P              RKK+ VGKAGITEGIVNGIHERWRR+EVVKI
Sbjct: 173  KEDERAPTLAELTLPEEELRRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKI 232

Query: 1712 KCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDY 1533
            +CED+C++NMKRTH+ LERKTGGLV+WRSGS I+LYRGANY+YPYFLSDN+  +    D 
Sbjct: 233  RCEDICKLNMKRTHDILERKTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDA 292

Query: 1532 ISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLAS-SLVSGVGSPKKVRFILPGEV 1356
             S     N++    EV +S G    KS   P+ +N++A  SL+ GVG P +VRF LPGE 
Sbjct: 293  SSDSQMNNEEHDGKEVCSS-GKGDVKS-AGPMPANKIAPLSLIQGVGYPTRVRFQLPGEA 350

Query: 1355 QLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREM 1176
            QLEE+ADRLLDGLGPRFTDWWGY+PLP+DADLL  +VPGYR+PFRLLPYG+KPKLT+ EM
Sbjct: 351  QLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEM 410

Query: 1175 TVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELK 996
            TVLRRLGRPL CHFALGRNR LQGLA S++KLWEKCEIAKIAVKRGVQNTNS++MAEELK
Sbjct: 411  TVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 470

Query: 995  QLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMD----SGSSVKAT 828
             LTGGTL+SRDREFIV YRGKDFLPPAVS+AIE RR +G H GK ++D    + ++ ++ 
Sbjct: 471  NLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESE 530

Query: 827  VTPTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXX 648
            +  +EH    +     DQK    S++R LR  +A V+  +                    
Sbjct: 531  LGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAEL 590

Query: 647  XXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELV 468
                 P +PE+DKEGITEEERYMLRKVGLRM  +LL+GRRG+FDGT+ENMHLHWKYRELV
Sbjct: 591  EEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELV 650

Query: 467  KVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLN 288
            K+IS  +S ED++ +ARTLEAESGGILVAVERVSKG+AII+YRGKNYKRP  LRP+TLLN
Sbjct: 651  KIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLN 710

Query: 287  KRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQL 183
            KR+A+ RSL+AQRRESLKLHVL+LT+NI+ +K QL
Sbjct: 711  KREALKRSLEAQRRESLKLHVLRLTRNIDELKHQL 745


>ref|XP_008793802.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Phoenix dactylifera]
            gi|672139996|ref|XP_008793803.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Phoenix dactylifera]
            gi|672139998|ref|XP_008793804.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1, chloroplastic
            isoform X1 [Phoenix dactylifera]
          Length = 1052

 Score =  812 bits (2098), Expect = 0.0
 Identities = 441/730 (60%), Positives = 532/730 (72%), Gaps = 14/730 (1%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFL--EETKETHHPVTGSGSAGEIFI 2070
            PPKS  R S +     +T++K+AIQRI+EKLR+LG+L  E TK    P TG GSAGEIFI
Sbjct: 42   PPKSYLRASSASAPANETLAKSAIQRISEKLRSLGYLADEPTKSADRPPTGPGSAGEIFI 101

Query: 2069 PPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEV-KGELEKQKEIAARVVGKR 1893
            P P ++P RR+GHTID SWSTP +PVPEPGSG  ITR++ +   E E++KE       K+
Sbjct: 102  PTPHEIPKRRVGHTIDSSWSTPEHPVPEPGSGGTITRFNYLWSREKEQEKE-------KK 154

Query: 1892 RKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKI 1713
              + V PTVAELT+P              +K++ VGKAGITEGIVNGIHERWRRSE+VKI
Sbjct: 155  ASKEVVPTVAELTIPAEVLKRLRSEGIRLQKRLKVGKAGITEGIVNGIHERWRRSELVKI 214

Query: 1712 KCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDY 1533
            KCEDLCR+NMKRTHE LERKTGGLVVWRSGSII+LYRGANY+YPYF   +  R   +VD 
Sbjct: 215  KCEDLCRMNMKRTHEILERKTGGLVVWRSGSIIILYRGANYKYPYFHYGDQMRK--NVDE 272

Query: 1532 ISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASS---LVSGVGSPKKVRFILPG 1362
            +S      D  ++ +  NS+    P  +V+  S +   S+   LV GVGSP KVR   PG
Sbjct: 273  VSPESSMEDGALDKQGVNSM----PACIVKSSSGSFATSAQSFLVIGVGSPNKVRLQQPG 328

Query: 1361 EVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDR 1182
            E QLEE+ADRLLDGLGPRFT+WWGY+PLPVDADLL  IVPG+RKPFRLLP+GIKPKLTDR
Sbjct: 329  EAQLEEEADRLLDGLGPRFTNWWGYDPLPVDADLLPAIVPGFRKPFRLLPFGIKPKLTDR 388

Query: 1181 EMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEE 1002
            EMT+LRRL R L CHFALGRNRN QGLA+S++KLWEKCE+AKIA+KRGVQNTNS++MAEE
Sbjct: 389  EMTILRRLSRHLPCHFALGRNRNHQGLAVSMIKLWEKCEVAKIAIKRGVQNTNSELMAEE 448

Query: 1001 LKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVT 822
            LKQLTGGTL+S+D+E+IV YRGKDFLPPAVS AIEERRN G  I +   D    V AT+ 
Sbjct: 449  LKQLTGGTLLSKDKEYIVFYRGKDFLPPAVSLAIEERRNGGIGIKRQNTDGRGRV-ATID 507

Query: 821  PTEHLYV-----DELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXX 657
              E  +V     DE     ++KRA ++E+R       A++ ++                 
Sbjct: 508  APELEFVRAASADEPHGKAEEKRALSTERR----PRTALERVETKLFQVMEEKEKAEKLL 563

Query: 656  XXXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYR 477
                   EPLK E DKEGI+EEERYMLRKVGLRM  +LL+GRRGVF GT+ENMHLHWKYR
Sbjct: 564  KELEKPVEPLKVESDKEGISEEERYMLRKVGLRMQPFLLLGRRGVFAGTVENMHLHWKYR 623

Query: 476  ELVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRT 297
            EL+K+ISKD+  E+V R AR LEAESGGILVAVERVSKGHAIIVYRGKNYKRP++LRP+T
Sbjct: 624  ELIKIISKDRCIENVERAARILEAESGGILVAVERVSKGHAIIVYRGKNYKRPSNLRPQT 683

Query: 296  LLNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQL--VKDDIVANHFQRTESEGAIT 123
            LL+KR+AM RSL+AQR +SLKL VL L++NI+ +K Q+  VKD  + +  Q TE E   +
Sbjct: 684  LLSKREAMKRSLEAQRSKSLKLRVLNLSRNIDRLKHQMSQVKDGSLEDSVQLTEHERISS 743

Query: 122  ELETSG-SGS 96
              ET+  SGS
Sbjct: 744  AAETNDQSGS 753


>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
            gi|462413233|gb|EMJ18282.1| hypothetical protein
            PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  808 bits (2087), Expect = 0.0
 Identities = 427/700 (61%), Positives = 504/700 (72%), Gaps = 11/700 (1%)
 Frame = -1

Query: 2240 PKSLSRNSPSP--------TADTKTVS-KTAIQRIAEKLRNLGFLEETKETHHPVTGSGS 2088
            PK+L   +P P        T  TKT++ K+AIQRIAEKLR+LGF E   E   P   +  
Sbjct: 30   PKTLPSQNPKPSKFAIRSSTTGTKTLAPKSAIQRIAEKLRSLGFTENN-EKPQPQPDTKY 88

Query: 2087 AGEIFIPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAAR 1908
            AGEIF+P P +LP  R+GHT+D SWSTP NPVPEPG+G AI R+HE++ E++KQKE+   
Sbjct: 89   AGEIFVPLPQRLPKYRVGHTLDSSWSTPENPVPEPGTGRAIARFHELRREVKKQKELEK- 147

Query: 1907 VVGKRRKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRS 1728
              GK+ +R   PT+AEL++               RKK+ +GKAGITEGIVNGIHE WRRS
Sbjct: 148  -TGKKEERV--PTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRS 204

Query: 1727 EVVKIKCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDK 1548
            EVVKI CEDLCR+NMKRTH+ LERKTGGLVVWRSGS IVLYRG NY+YPYFL D    D 
Sbjct: 205  EVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSGSKIVLYRGVNYKYPYFLRDKVDEDS 264

Query: 1547 H-DVDYISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFI 1371
              D  + + PD   +D +N E+ N +      +++   ++ R    LV GVG   +VRF 
Sbjct: 265  TIDTSHNALPDAHINDGIN-EISNEVN----SAIIPSTTNERAQPMLVKGVGLQDRVRFQ 319

Query: 1370 LPGEVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKL 1191
            LPGE QL E+AD +L+GLGPRFTDWWGY PLPVDADLL  IVPGYRKPFRLLPYG+KPKL
Sbjct: 320  LPGEAQLTEEADHMLEGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGLKPKL 379

Query: 1190 TDREMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVM 1011
            TD EMT +RRLGRPL CHFALGRNRNLQGLA SIVKLWEKCEIAKIAVKRGVQNTN+++M
Sbjct: 380  TDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWEKCEIAKIAVKRGVQNTNTEIM 439

Query: 1010 AEELKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKA 831
            AEELK+LTGGTL++RDREFIVLYRGKDFLPPAVS+AIEERR +  H  K   + G+SV  
Sbjct: 440  AEELKRLTGGTLLARDREFIVLYRGKDFLPPAVSSAIEERRKYAIHAEKQIAEHGTSVTT 499

Query: 830  TVTPTEHLYVDELQE-VKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXX 654
                      +   E   D K    S +RKL+  +  V                      
Sbjct: 500  RQELEPRTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLSMALEKKAKAEKLLA 559

Query: 653  XXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRE 474
                   P +PE+DKEGIT+EERYMLRKVGLRM  +LLMGRRGVFDGTIENMHLHWKYRE
Sbjct: 560  ELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRE 619

Query: 473  LVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTL 294
            LVK+I  +KS E V ++A+TLEAESGGILVAVERVSKG+AIIVYRGKNY RP  LRP+TL
Sbjct: 620  LVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTL 679

Query: 293  LNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKD 174
            LNKR+AM RS++AQRRESLKLHVL+L +NI+ +K  LVKD
Sbjct: 680  LNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKD 719


>ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Prunus mume]
          Length = 1109

 Score =  806 bits (2083), Expect = 0.0
 Identities = 428/700 (61%), Positives = 503/700 (71%), Gaps = 11/700 (1%)
 Frame = -1

Query: 2240 PKSLSRNSPSP--------TADTKTVS-KTAIQRIAEKLRNLGFLEETKETHHPVTGSGS 2088
            PK+L   +P P        T  TKT++ K+AIQRIAEKLR+LGF E   E   P   +  
Sbjct: 30   PKTLPSQNPKPSKFAIRSSTTGTKTLAPKSAIQRIAEKLRSLGFTENN-EKPQPQPDTKH 88

Query: 2087 AGEIFIPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAAR 1908
            AGEIF+P P +LP  R+GHT+D SWSTP NPVPEPG+G AI R+HE++ E++KQKE+   
Sbjct: 89   AGEIFVPLPQRLPKYRVGHTLDSSWSTPENPVPEPGTGRAIARFHELRREVKKQKELEK- 147

Query: 1907 VVGKRRKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRS 1728
              GK+ +R   PT+AEL++               RKK+ +GKAGITEGIVNGIHE WRRS
Sbjct: 148  -TGKKEERV--PTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRS 204

Query: 1727 EVVKIKCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDK 1548
            EVVKI CEDLCR+NMKRTH+ LERKTGGLVVWRSGS IVLYRG NY+YPYFL D    D 
Sbjct: 205  EVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSGSKIVLYRGVNYKYPYFLHDKVDEDS 264

Query: 1547 H-DVDYISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFI 1371
              D  +   PD R +D +N E+ N +      +++   ++ R    LV GVG   +VRF 
Sbjct: 265  TIDTSHNVLPDARINDGIN-EISNEVD----SAIIPSTTNERAQPMLVKGVGLQDRVRFQ 319

Query: 1370 LPGEVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKL 1191
            LPGE QL E+ADR+L+GLGPRFTDWWGY PLPVDADLL  IVPGYRKPFRLLPYG+KPKL
Sbjct: 320  LPGEAQLTEEADRMLEGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGLKPKL 379

Query: 1190 TDREMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVM 1011
            TD EMT +RRLGRPL CHFALGRNRNLQGLA SIVKLWEKCEIAKIAVKRGVQNTN+++M
Sbjct: 380  TDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWEKCEIAKIAVKRGVQNTNTEIM 439

Query: 1010 AEELKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKA 831
            AEELK+LTGGTL++RDREFIVLYRGKDFLP AVS+AIEERR +  H  K   + G+SV  
Sbjct: 440  AEELKRLTGGTLLARDREFIVLYRGKDFLPSAVSSAIEERRKYAIHAEKQIAERGTSVTT 499

Query: 830  TVTPTEHLYVDELQE-VKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXX 654
                      +   E   D K    S +RKL+  +  V                      
Sbjct: 500  RQELEPRTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLSMALEKKAKAEKLLA 559

Query: 653  XXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRE 474
                   P +PE DKEGIT+EERYMLRKVGLRM  +LLMGRRGVFDGTIENMHLHWKYRE
Sbjct: 560  ELENAAIPQQPETDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRE 619

Query: 473  LVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTL 294
            LVK+I  +KS E V ++A+TLEAESGGILVAVERVSKG+AIIVYRGKNY RP  LRP+TL
Sbjct: 620  LVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTL 679

Query: 293  LNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKD 174
            LNKR+AM RS++AQRRESLKLHVL+L +NI+ +K  LVKD
Sbjct: 680  LNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKD 719


>ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Prunus mume]
          Length = 1122

 Score =  806 bits (2083), Expect = 0.0
 Identities = 428/700 (61%), Positives = 503/700 (71%), Gaps = 11/700 (1%)
 Frame = -1

Query: 2240 PKSLSRNSPSP--------TADTKTVS-KTAIQRIAEKLRNLGFLEETKETHHPVTGSGS 2088
            PK+L   +P P        T  TKT++ K+AIQRIAEKLR+LGF E   E   P   +  
Sbjct: 30   PKTLPSQNPKPSKFAIRSSTTGTKTLAPKSAIQRIAEKLRSLGFTENN-EKPQPQPDTKH 88

Query: 2087 AGEIFIPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAAR 1908
            AGEIF+P P +LP  R+GHT+D SWSTP NPVPEPG+G AI R+HE++ E++KQKE+   
Sbjct: 89   AGEIFVPLPQRLPKYRVGHTLDSSWSTPENPVPEPGTGRAIARFHELRREVKKQKELEK- 147

Query: 1907 VVGKRRKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRS 1728
              GK+ +R   PT+AEL++               RKK+ +GKAGITEGIVNGIHE WRRS
Sbjct: 148  -TGKKEERV--PTLAELSLGKGELRRLTTVGIGLRKKLKIGKAGITEGIVNGIHENWRRS 204

Query: 1727 EVVKIKCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDK 1548
            EVVKI CEDLCR+NMKRTH+ LERKTGGLVVWRSGS IVLYRG NY+YPYFL D    D 
Sbjct: 205  EVVKIVCEDLCRMNMKRTHDMLERKTGGLVVWRSGSKIVLYRGVNYKYPYFLHDKVDEDS 264

Query: 1547 H-DVDYISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFI 1371
              D  +   PD R +D +N E+ N +      +++   ++ R    LV GVG   +VRF 
Sbjct: 265  TIDTSHNVLPDARINDGIN-EISNEVD----SAIIPSTTNERAQPMLVKGVGLQDRVRFQ 319

Query: 1370 LPGEVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKL 1191
            LPGE QL E+ADR+L+GLGPRFTDWWGY PLPVDADLL  IVPGYRKPFRLLPYG+KPKL
Sbjct: 320  LPGEAQLTEEADRMLEGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGLKPKL 379

Query: 1190 TDREMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVM 1011
            TD EMT +RRLGRPL CHFALGRNRNLQGLA SIVKLWEKCEIAKIAVKRGVQNTN+++M
Sbjct: 380  TDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWEKCEIAKIAVKRGVQNTNTEIM 439

Query: 1010 AEELKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKA 831
            AEELK+LTGGTL++RDREFIVLYRGKDFLP AVS+AIEERR +  H  K   + G+SV  
Sbjct: 440  AEELKRLTGGTLLARDREFIVLYRGKDFLPSAVSSAIEERRKYAIHAEKQIAERGTSVTT 499

Query: 830  TVTPTEHLYVDELQE-VKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXX 654
                      +   E   D K    S +RKL+  +  V                      
Sbjct: 500  RQELEPRTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLSMALEKKAKAEKLLA 559

Query: 653  XXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRE 474
                   P +PE DKEGIT+EERYMLRKVGLRM  +LLMGRRGVFDGTIENMHLHWKYRE
Sbjct: 560  ELENAAIPQQPETDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRE 619

Query: 473  LVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTL 294
            LVK+I  +KS E V ++A+TLEAESGGILVAVERVSKG+AIIVYRGKNY RP  LRP+TL
Sbjct: 620  LVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTL 679

Query: 293  LNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKD 174
            LNKR+AM RS++AQRRESLKLHVL+L +NI+ +K  LVKD
Sbjct: 680  LNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKD 719


>ref|XP_008793805.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Phoenix dactylifera]
          Length = 1001

 Score =  805 bits (2078), Expect = 0.0
 Identities = 430/703 (61%), Positives = 518/703 (73%), Gaps = 11/703 (1%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFL--EETKETHHPVTGSGSAGEIFI 2070
            PPKS  R S +     +T++K+AIQRI+EKLR+LG+L  E TK    P TG GSAGEIFI
Sbjct: 42   PPKSYLRASSASAPANETLAKSAIQRISEKLRSLGYLADEPTKSADRPPTGPGSAGEIFI 101

Query: 2069 PPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEV-KGELEKQKEIAARVVGKR 1893
            P P ++P RR+GHTID SWSTP +PVPEPGSG  ITR++ +   E E++KE       K+
Sbjct: 102  PTPHEIPKRRVGHTIDSSWSTPEHPVPEPGSGGTITRFNYLWSREKEQEKE-------KK 154

Query: 1892 RKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKI 1713
              + V PTVAELT+P              +K++ VGKAGITEGIVNGIHERWRRSE+VKI
Sbjct: 155  ASKEVVPTVAELTIPAEVLKRLRSEGIRLQKRLKVGKAGITEGIVNGIHERWRRSELVKI 214

Query: 1712 KCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDY 1533
            KCEDLCR+NMKRTHE LERKTGGLVVWRSGSII+LYRGANY+YPYF   +  R   +VD 
Sbjct: 215  KCEDLCRMNMKRTHEILERKTGGLVVWRSGSIIILYRGANYKYPYFHYGDQMRK--NVDE 272

Query: 1532 ISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASS---LVSGVGSPKKVRFILPG 1362
            +S      D  ++ +  NS+    P  +V+  S +   S+   LV GVGSP KVR   PG
Sbjct: 273  VSPESSMEDGALDKQGVNSM----PACIVKSSSGSFATSAQSFLVIGVGSPNKVRLQQPG 328

Query: 1361 EVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDR 1182
            E QLEE+ADRLLDGLGPRFT+WWGY+PLPVDADLL  IVPG+RKPFRLLP+GIKPKLTDR
Sbjct: 329  EAQLEEEADRLLDGLGPRFTNWWGYDPLPVDADLLPAIVPGFRKPFRLLPFGIKPKLTDR 388

Query: 1181 EMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEE 1002
            EMT+LRRL R L CHFALGRNRN QGLA+S++KLWEKCE+AKIA+KRGVQNTNS++MAEE
Sbjct: 389  EMTILRRLSRHLPCHFALGRNRNHQGLAVSMIKLWEKCEVAKIAIKRGVQNTNSELMAEE 448

Query: 1001 LKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVT 822
            LKQLTGGTL+S+D+E+IV YRGKDFLPPAVS AIEERRN G  I +   D    V AT+ 
Sbjct: 449  LKQLTGGTLLSKDKEYIVFYRGKDFLPPAVSLAIEERRNGGIGIKRQNTDGRGRV-ATID 507

Query: 821  PTEHLYV-----DELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXX 657
              E  +V     DE     ++KRA ++E+R       A++ ++                 
Sbjct: 508  APELEFVRAASADEPHGKAEEKRALSTERR----PRTALERVETKLFQVMEEKEKAEKLL 563

Query: 656  XXXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYR 477
                   EPLK E DKEGI+EEERYMLRKVGLRM  +LL+GRRGVF GT+ENMHLHWKYR
Sbjct: 564  KELEKPVEPLKVESDKEGISEEERYMLRKVGLRMQPFLLLGRRGVFAGTVENMHLHWKYR 623

Query: 476  ELVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRT 297
            EL+K+ISKD+  E+V R AR LEAESGGILVAVERVSKGHAIIVYRGKNYKRP++LRP+T
Sbjct: 624  ELIKIISKDRCIENVERAARILEAESGGILVAVERVSKGHAIIVYRGKNYKRPSNLRPQT 683

Query: 296  LLNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDDI 168
            LL+KR+AM RSL+AQR +SLKL VL L++NI+ +K Q+   +I
Sbjct: 684  LLSKREAMKRSLEAQRSKSLKLRVLNLSRNIDRLKHQMEVHEI 726


>ref|XP_009419882.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 999

 Score =  798 bits (2062), Expect = 0.0
 Identities = 423/695 (60%), Positives = 516/695 (74%), Gaps = 8/695 (1%)
 Frame = -1

Query: 2231 LSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFLEETKET--HHPVTGSGSAGEIFIPPPD 2058
            L  ++P+P    +T++K+AIQRI+EKLR+LG+LE    T    P TG GSAGEIFIP   
Sbjct: 52   LRTSNPTP----ETLAKSAIQRISEKLRSLGYLENGPATAADRPATGRGSAGEIFIPTSR 107

Query: 2057 QLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTV 1878
            ++P RR+G+TID SWSTP +PVPEPGSG+ I R+ ++    EK+++ AAR     +    
Sbjct: 108  EIPSRRVGYTIDSSWSTPEHPVPEPGSGVTINRFGDL-WRREKERQAAARAT---KDAAA 163

Query: 1877 PPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDL 1698
            PP VAELT+P               K++ VGKAGITEGIVNGIHERWRRSE+VKIKCEDL
Sbjct: 164  PPMVAELTIPPEELKRLRREGVRLAKRLKVGKAGITEGIVNGIHERWRRSELVKIKCEDL 223

Query: 1697 CRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDV-DYISTP 1521
            CR+NMKRTHE LERKTGGLV+WRSGSII+LYRG NY+YPY+   +    K+++ D +S P
Sbjct: 224  CRMNMKRTHEILERKTGGLVIWRSGSIIILYRGVNYKYPYYYDGDK---KNEIFDEVSLP 280

Query: 1520 DPRNDDEVNPEVDNSLGMVGPKSLVE-PISSNRLASSLVSGVGSPKKVRFILPGEVQLEE 1344
                ++E N +  NS  M+   S  E P +  R  S LV GVGSPKKVR  L GEVQLEE
Sbjct: 281  SGLYNEETNKQEVNSPKMISANSSAESPTAPAR--SLLVVGVGSPKKVRVQLEGEVQLEE 338

Query: 1343 DADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLR 1164
            +ADRLLDGLGPRFTDWWG +PLPVDADLL  +VPG+RKP RL+P+GIKPKLTDREMT+LR
Sbjct: 339  EADRLLDGLGPRFTDWWGCDPLPVDADLLPAVVPGFRKPLRLIPFGIKPKLTDREMTILR 398

Query: 1163 RLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTG 984
            RLGRPL CHFALGR+RNLQGLA+S++KLWE+CEIAKIAVKRGVQNTNS +MAEELKQLTG
Sbjct: 399  RLGRPLPCHFALGRSRNLQGLAVSMIKLWERCEIAKIAVKRGVQNTNSIMMAEELKQLTG 458

Query: 983  GTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSG---SSVKATVTPTE 813
            GTL+SRD+EFIV YRGKDFLPPAVS AIEERRN+G++  K   D     +S+  + T   
Sbjct: 459  GTLLSRDKEFIVFYRGKDFLPPAVSIAIEERRNYGSNKQKRNSDENHPVASINVSETKIS 518

Query: 812  HLYV-DELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXX 636
             + + DE +E  +Q R F  E RK  + + A + ++                        
Sbjct: 519  KITLPDEPKEGAEQIRNFALESRKTSV-NVAFQRMETRLSQAIKKKEKAEKFISELEPLV 577

Query: 635  EPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVIS 456
            EP K EVDKE I+EEERYMLRK+GLRM  +LL+GRRGVFDGT+ENMHLHWKYRELVK+IS
Sbjct: 578  EPPKFEVDKEAISEEERYMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIIS 637

Query: 455  KDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQA 276
            KD+  +++   AR LEAESGGILVAVERVSKG+AIIVYRGKNY+RP  LRP TLLN+R+A
Sbjct: 638  KDRCMKNIETAARILEAESGGILVAVERVSKGYAIIVYRGKNYQRPVTLRPTTLLNRREA 697

Query: 275  MNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDD 171
            M  SL+AQR ESLKLHVL +++N+N MK Q+V+DD
Sbjct: 698  MIHSLEAQRCESLKLHVLNISRNLNQMKHQMVQDD 732


>ref|XP_010255197.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nelumbo nucifera]
          Length = 1034

 Score =  798 bits (2061), Expect = 0.0
 Identities = 432/718 (60%), Positives = 518/718 (72%), Gaps = 6/718 (0%)
 Frame = -1

Query: 2243 PPKSLSRNSPSPTADTKTVSKTAIQRIAEKLRNLGFLEE-TKETHHPVTGSGSAGEIFIP 2067
            PPK L +   S  AD +TVSKTAIQRI+EKLR+LG+LE+ ++E+  P T  GSAGEIFIP
Sbjct: 39   PPKFLLQ---SYAADVRTVSKTAIQRISEKLRSLGYLEDNSRESQQPETNHGSAGEIFIP 95

Query: 2066 PPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRK 1887
               +LP  R+G+TID SWSTP NPVP PGSG A++R+ E+K ++EKQK          +K
Sbjct: 96   FSHELPKYRVGYTIDSSWSTPENPVPHPGSGAALSRFQELKRKVEKQKR-------STKK 148

Query: 1886 RTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKC 1707
                PT+AELT+P              +KK+ VGKAGITEGIVNGIHERWRRSE+VKI+ 
Sbjct: 149  EERAPTLAELTIPEQELKRLITIGIGLKKKLKVGKAGITEGIVNGIHERWRRSELVKIRF 208

Query: 1706 EDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSD-NSARDKHDVDYI 1530
            EDLC +NMKRTH+ LERKTGGLVVWRSGS I+LYRGANYEYPYF ++ N+A D  + +  
Sbjct: 209  EDLCSMNMKRTHDILERKTGGLVVWRSGSTIILYRGANYEYPYFKANKNTASDTSNTN-- 266

Query: 1529 STPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEVQL 1350
            S  D  +         NSL  V  +S     S+      LV GVGSP KVRF L GE++ 
Sbjct: 267  SGGDGGST--------NSLHKVDKESAQTGQSNGIACPPLVHGVGSPDKVRFQLQGEIEF 318

Query: 1349 EEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTV 1170
             E+AD LLDGLGPRFTDWWGY+PLPVDADLL  +VPGYRKPFRLLPYGI+PKLT+ EMT+
Sbjct: 319  AEEADCLLDGLGPRFTDWWGYDPLPVDADLLPAVVPGYRKPFRLLPYGIQPKLTNDEMTI 378

Query: 1169 LRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQL 990
            LRRL RPL CHFALGRNR LQGLA+S+VKLWEKCEIAKIAVKRGVQNTNS++MAEELK+L
Sbjct: 379  LRRLSRPLPCHFALGRNRKLQGLAVSMVKLWEKCEIAKIAVKRGVQNTNSELMAEELKRL 438

Query: 989  TGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSV----KATVT 822
            TGG L+SRD EFIV YRGKDFLPP+VS AIEERR HGT   K R+++ S +    +  + 
Sbjct: 439  TGGILLSRDVEFIVFYRGKDFLPPSVSTAIEERRKHGTGRSKQRVENSSLIDNMPETDIK 498

Query: 821  PTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXX 642
               H   ++ +   DQKR   S++ K   K +A+  +                       
Sbjct: 499  TAGHPSANKFEGGYDQKRNLISDKTKESSK-SAIYRITTKLSLALEKKTKAEKLLADLEK 557

Query: 641  XXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKV 462
              EP K E D+EGITEEERYMLRKVGLRM  +LL+GRRGVFDGT+ENMHLHWKYRELVKV
Sbjct: 558  AVEPQKQESDREGITEEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKV 617

Query: 461  ISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKR 282
            IS ++S EDV R ARTLEAESGGILVAVERV+KG AIIVYRGKNY+RP DLRPRTLLNK+
Sbjct: 618  ISSERSIEDVQRTARTLEAESGGILVAVERVNKGCAIIVYRGKNYQRPVDLRPRTLLNKK 677

Query: 281  QAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTESEGAITELETS 108
             AM RSL+AQR +SLKLH+L+LT++I+ +K QL  +++  N  Q T  +   TE  TS
Sbjct: 678  AAMKRSLEAQRHKSLKLHILRLTRDIDQLKLQLGNENMKTNCLQSTAQKIPDTESVTS 735


>ref|XP_010100925.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis] gi|587959642|gb|EXC45069.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 966

 Score =  793 bits (2047), Expect = 0.0
 Identities = 429/732 (58%), Positives = 511/732 (69%), Gaps = 6/732 (0%)
 Frame = -1

Query: 2240 PKSLSRNSPSPTADTKTV-SKTAIQRIAEKLRNLGFLEETKETHHPVTGSGSAGEIFIPP 2064
            PK L     S  AD +T+  K+AIQRI+EKLR+LGF   T E   P     SAGEIF+P 
Sbjct: 36   PKPLKFTVRSSNADAQTLLPKSAIQRISEKLRSLGF---TDENPSPEPERSSAGEIFVPL 92

Query: 2063 PDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQK--EIAARVVGKRR 1890
            P +LP +R+GHTID SWS+P NPVPEPGSG AI R+ E+K E+ +Q+  E        R 
Sbjct: 93   PHRLPKQRVGHTIDASWSSPENPVPEPGSGTAIKRFRELKTEVRRQRREERKESAANARE 152

Query: 1889 KRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIK 1710
            +R   PT+AEL +P              RKK+ VGKAGITEGIVNGIHERWR+SEVVKI+
Sbjct: 153  ERERVPTLAELRLPPEELRRLRTLGIGLRKKVKVGKAGITEGIVNGIHERWRQSEVVKIE 212

Query: 1709 CEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYI 1530
            CED+CR+NMKRTH+ LE+KTGGLVVWRSGS IVLYRG  Y+YPYF     A         
Sbjct: 213  CEDICRMNMKRTHDLLEKKTGGLVVWRSGSKIVLYRGIKYKYPYFFVGKDASHT-----A 267

Query: 1529 STPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLAS-SLVSGVGSPKKVRFILPGEVQ 1353
            + P P   DE   + D S  + G ++ V P   N+L   SL+ GVG P +VRF LPGE Q
Sbjct: 268  TLPVPDVGDEEQNKTDTSSSIDGVET-VAPTPGNKLVQPSLIQGVGLPNRVRFQLPGEAQ 326

Query: 1352 LEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMT 1173
            L E+ADRLLDGLGPRFTDWWGY+P PVDADLL  IV GYR+PFRLLPYG+ PKLTD EMT
Sbjct: 327  LAEEADRLLDGLGPRFTDWWGYDPQPVDADLLRPIVHGYRRPFRLLPYGVLPKLTDDEMT 386

Query: 1172 VLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQ 993
             LRRL RPL CHFALGRNRNLQGLA S+VKLWEKCE+AKIA+KRGVQNTNS++MAEELK 
Sbjct: 387  TLRRLARPLPCHFALGRNRNLQGLASSVVKLWEKCEVAKIAIKRGVQNTNSEMMAEELKS 446

Query: 992  LTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVTPTE 813
            LTGGTL++RDREFIVLYRGKDFLP AVS+AIEERR +     K++ +  +SVK       
Sbjct: 447  LTGGTLLARDREFIVLYRGKDFLPSAVSSAIEERRKYVIQAKKLKTEHQTSVKTEQDQLG 506

Query: 812  HLY--VDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXX 639
             +     EL+E+   K+   SEQRK  + + +VK                          
Sbjct: 507  SVVCGASELREINGHKKRLPSEQRKPSVAETSVKGTSIKLSMALEKKAKAEQLLAELEKA 566

Query: 638  XEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVI 459
                +PE+DKEGIT+EERYMLRK+GLRM  +LL+GRRGVFDGTIENMHLHWKYRELVKVI
Sbjct: 567  ESRQQPEIDKEGITKEERYMLRKIGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKVI 626

Query: 458  SKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQ 279
            S +KS E V+++A+TLEAESGGILVAVER SKG+AIIVYRGKNY+RP  LRP+TLL KR 
Sbjct: 627  SNEKSIEAVHQVAQTLEAESGGILVAVERESKGYAIIVYRGKNYERPASLRPQTLLTKRA 686

Query: 278  AMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTESEGAITELETSGSG 99
            AM RS++AQRR+SLKLHVLKLTKNI+ +K QLVKD    N  Q  +    +   E +G  
Sbjct: 687  AMKRSIEAQRRQSLKLHVLKLTKNIDDLKLQLVKDK-QRNKMQPADESSNLVRDEVNGIQ 745

Query: 98   SLKLSYHEMNVK 63
            S +    +  VK
Sbjct: 746  SAESLSLDAEVK 757


>ref|XP_008341495.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic [Malus
            domestica]
          Length = 1090

 Score =  790 bits (2040), Expect = 0.0
 Identities = 427/710 (60%), Positives = 506/710 (71%), Gaps = 9/710 (1%)
 Frame = -1

Query: 2240 PKSLSRNSPSPTADTKTVS-KTAIQRIAEKLRNLGFLEETKETHHPVTGSGSAGEIFIPP 2064
            PKS      S  ADTKT++ K+AIQRIAEKLR+LGF E T+          SAGEIF+P 
Sbjct: 43   PKSSKFTIRSSAADTKTLAPKSAIQRIAEKLRSLGFTESTQNPDRQ-PDKKSAGEIFVPI 101

Query: 2063 PDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKR 1884
            P++LP  R+GHT+D SWSTP NPVPEPG+G AI R+HE++ E++KQKE+      ++ K 
Sbjct: 102  PEKLPKYRVGHTLDASWSTPENPVPEPGTGGAIARFHELRREVKKQKELEREE--RKGKG 159

Query: 1883 TVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCE 1704
               PT+AEL++               RKK+ +GKAGITEGIVNGIHE WRRSEVVKI CE
Sbjct: 160  GRVPTLAELSLGKGELRRLTTVGLGLRKKLKIGKAGITEGIVNGIHENWRRSEVVKIVCE 219

Query: 1703 DLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDK-HDVDYIS 1527
            DLCR+NMKRTH+ LERKTGGLV WR+GS I+LYRG NY+YPYFL DN  +D   + + I+
Sbjct: 220  DLCRLNMKRTHDLLERKTGGLVXWRAGSKIILYRGVNYKYPYFLRDNVRKDSMSEANSIA 279

Query: 1526 TPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEVQLE 1347
             PD   +D  N    +S   V   ++V   S  R   +LV GVG P +VRF LPGE QL 
Sbjct: 280  LPDTHINDGGNESGTSSKNDVN-SAIVPSTSYERAQPALVQGVGLPGRVRFQLPGEAQLS 338

Query: 1346 EDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVL 1167
            E+ D +L+GLGPRFTDWWG  PLP+DADLL  IVPGYRKPFRLLPYG+  KLTD EMT +
Sbjct: 339  EENDSMLEGLGPRFTDWWGCEPLPIDADLLPAIVPGYRKPFRLLPYGLNSKLTDDEMTTI 398

Query: 1166 RRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLT 987
            RRLGRPL CHFALGRNRNLQGLA SIVKLWEKCEIAKIAVKRGVQNTNS++MAEELK+LT
Sbjct: 399  RRLGRPLPCHFALGRNRNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLT 458

Query: 986  GGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKA-------T 828
            GGTL++RDREFIVLYRGKDFLPPAVS+AIEERR H      +R++  +SV         T
Sbjct: 459  GGTLLARDREFIVLYRGKDFLPPAVSSAIEERRRHA-----IRVERSTSVPTRQDLEPRT 513

Query: 827  VTPTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXX 648
                +H +++      D K    S  RKL+  +AAV                        
Sbjct: 514  EPENKHGWIB------DHKMGLPS-ARKLKSTEAAVDRTSIKLSMALEKRVKAEKLLADL 566

Query: 647  XXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELV 468
                 P +PE+DKEGIT+EERYMLRKVGLRM  +LLMGRRGVFDGTIENMHLHWKYRELV
Sbjct: 567  ENAATPQQPEIDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFDGTIENMHLHWKYRELV 626

Query: 467  KVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLN 288
            K+IS +KS E V+++A+TLEAESGGILVAVERVSKG+AIIVYRGKNY RP  LRP+TLL 
Sbjct: 627  KIISNEKSIETVHQVAQTLEAESGGILVAVERVSKGYAIIVYRGKNYSRPASLRPQTLLT 686

Query: 287  KRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTES 138
            KR+AM RS++AQRRESLKLHVLKL +NI  +K QL +D    N     ES
Sbjct: 687  KREAMKRSIEAQRRESLKLHVLKLNENIAELKLQLDEDKESDNTHSVNES 736


>ref|XP_011625144.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Amborella trichopoda]
          Length = 1062

 Score =  777 bits (2006), Expect = 0.0
 Identities = 418/687 (60%), Positives = 497/687 (72%), Gaps = 11/687 (1%)
 Frame = -1

Query: 2192 TVSKTAIQRIAEKLRNLGFLEETKETHHPVTGSGSAGEIFIPPPDQLPVRRIGHTIDGSW 2013
            TVSKTAIQRIAEKL++LG++EE  ++    TG GS GEIFIP  + L   R+G T+D SW
Sbjct: 58   TVSKTAIQRIAEKLKSLGYVEELNDSEPQCTGPGSPGEIFIPRLENLAKIRVGSTLDKSW 117

Query: 2012 STPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPTVAELTVPXXXXX 1833
            STP NPVPEPGSG AI+R+H ++ E +K       V G+R      P++AEL +P     
Sbjct: 118  STPENPVPEPGSGSAISRFHVLRKEAKKNA-----VKGERGSA---PSLAELRIPEAELQ 169

Query: 1832 XXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRINMKRTHETLERK 1653
                      KK+IVGK G+TEGIVNGIHERWRRSE+VKIKC+DL  +NMKRTHE LE K
Sbjct: 170  RLRSIGICLEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETK 229

Query: 1652 TGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDP----RNDDEVNPEV 1485
            TGG+V+ RSGSII+LYRGANY YPYF++     +  D+  +S           +E N   
Sbjct: 230  TGGIVICRSGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKT- 288

Query: 1484 DNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEVQLEEDADRLLDGLGPRF 1305
             NSL  VG  S VE  ++     S+V GVGSP KVRF LPGE QL+++ADRLLDGLGPRF
Sbjct: 289  -NSLPRVGGISAVE--ATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRF 345

Query: 1304 TDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLRRLGRPLRCHFALG 1125
            TDWWGY PLPVDADLL   V GYRKPFRLLPYG+KPKLTD EMT LRRLGRPL CHFALG
Sbjct: 346  TDWWGYGPLPVDADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALG 405

Query: 1124 RNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTGGTLISRDREFIVL 945
            RNRNLQGLA SIV+LWEKCEIAKIAVKRGVQNTNS++MAEELK+LTGGTL+SRDREFIV 
Sbjct: 406  RNRNLQGLATSIVRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLSRDREFIVF 465

Query: 944  YRGKDFLPPAVSAAIEERRNHGTHIGKMR------MDSGSSVKATVTPTEHLYVDELQEV 783
            YRGKDFLPPAVS+AIEERR       +++      + S +S+   V   +     ELQ++
Sbjct: 466  YRGKDFLPPAVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDL 525

Query: 782  KDQ-KRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXXEPLKPEVDKE 606
             +Q +   + +Q K    + A+K LD                        E  KP++DKE
Sbjct: 526  NNQDEEKLSKDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKE 585

Query: 605  GITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVISKDKSFEDVNR 426
            GITEEERYMLRKVGLRM A+LL+GRRGVFDGTIENMHLHWKYREL+K+ISKD+S  +V+ 
Sbjct: 586  GITEEERYMLRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHH 645

Query: 425  MARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQAMNRSLQAQRR 246
             ARTLEAESGGILV+VE V+KGHAIIVYRGKNY+RP +LRP+ LLNKR+AM  SL+AQRR
Sbjct: 646  AARTLEAESGGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRR 705

Query: 245  ESLKLHVLKLTKNINHMKQQLVKDDIV 165
            ESLKLHVLKL + I+ MK Q+ KDD V
Sbjct: 706  ESLKLHVLKLDRIIDRMKLQMAKDDRV 732


>ref|XP_011625143.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Amborella trichopoda]
          Length = 1070

 Score =  777 bits (2006), Expect = 0.0
 Identities = 418/687 (60%), Positives = 497/687 (72%), Gaps = 11/687 (1%)
 Frame = -1

Query: 2192 TVSKTAIQRIAEKLRNLGFLEETKETHHPVTGSGSAGEIFIPPPDQLPVRRIGHTIDGSW 2013
            TVSKTAIQRIAEKL++LG++EE  ++    TG GS GEIFIP  + L   R+G T+D SW
Sbjct: 58   TVSKTAIQRIAEKLKSLGYVEELNDSEPQCTGPGSPGEIFIPRLENLAKIRVGSTLDKSW 117

Query: 2012 STPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPTVAELTVPXXXXX 1833
            STP NPVPEPGSG AI+R+H ++ E +K       V G+R      P++AEL +P     
Sbjct: 118  STPENPVPEPGSGSAISRFHVLRKEAKKNA-----VKGERGSA---PSLAELRIPEAELQ 169

Query: 1832 XXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRINMKRTHETLERK 1653
                      KK+IVGK G+TEGIVNGIHERWRRSE+VKIKC+DL  +NMKRTHE LE K
Sbjct: 170  RLRSIGICLEKKLIVGKPGVTEGIVNGIHERWRRSELVKIKCQDLSMVNMKRTHEILETK 229

Query: 1652 TGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDP----RNDDEVNPEV 1485
            TGG+V+ RSGSII+LYRGANY YPYF++     +  D+  +S           +E N   
Sbjct: 230  TGGIVICRSGSIIILYRGANYTYPYFVAGEDLSENEDIHEVSFKSSVVYGSGSNEENKT- 288

Query: 1484 DNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEVQLEEDADRLLDGLGPRF 1305
             NSL  VG  S VE  ++     S+V GVGSP KVRF LPGE QL+++ADRLLDGLGPRF
Sbjct: 289  -NSLPRVGGISAVE--ATQITGRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRF 345

Query: 1304 TDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLRRLGRPLRCHFALG 1125
            TDWWGY PLPVDADLL   V GYRKPFRLLPYG+KPKLTD EMT LRRLGRPL CHFALG
Sbjct: 346  TDWWGYGPLPVDADLLPATVSGYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALG 405

Query: 1124 RNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTGGTLISRDREFIVL 945
            RNRNLQGLA SIV+LWEKCEIAKIAVKRGVQNTNS++MAEELK+LTGGTL+SRDREFIV 
Sbjct: 406  RNRNLQGLATSIVRLWEKCEIAKIAVKRGVQNTNSELMAEELKRLTGGTLLSRDREFIVF 465

Query: 944  YRGKDFLPPAVSAAIEERRNHGTHIGKMR------MDSGSSVKATVTPTEHLYVDELQEV 783
            YRGKDFLPPAVS+AIEERR       +++      + S +S+   V   +     ELQ++
Sbjct: 466  YRGKDFLPPAVSSAIEERRTVDVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDL 525

Query: 782  KDQ-KRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXXEPLKPEVDKE 606
             +Q +   + +Q K    + A+K LD                        E  KP++DKE
Sbjct: 526  NNQDEEKLSKDQLKPMKVNVAMKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKE 585

Query: 605  GITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVISKDKSFEDVNR 426
            GITEEERYMLRKVGLRM A+LL+GRRGVFDGTIENMHLHWKYREL+K+ISKD+S  +V+ 
Sbjct: 586  GITEEERYMLRKVGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHH 645

Query: 425  MARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQAMNRSLQAQRR 246
             ARTLEAESGGILV+VE V+KGHAIIVYRGKNY+RP +LRP+ LLNKR+AM  SL+AQRR
Sbjct: 646  AARTLEAESGGILVSVETVNKGHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRR 705

Query: 245  ESLKLHVLKLTKNINHMKQQLVKDDIV 165
            ESLKLHVLKL + I+ MK Q+ KDD V
Sbjct: 706  ESLKLHVLKLDRIIDRMKLQMAKDDRV 732


>ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Populus euphratica]
          Length = 1026

 Score =  775 bits (2002), Expect = 0.0
 Identities = 433/744 (58%), Positives = 519/744 (69%), Gaps = 12/744 (1%)
 Frame = -1

Query: 2213 SPTADT-KTVSKTAIQRIAEKLRNLGFLEETKETHHPVTGSGSAGEIFIPPPDQLPVRRI 2037
            S +AD  +T+  +AIQRIA+KLR+LGF EET ET  P T    AGEIFIP P++LP  R+
Sbjct: 49   SSSADNPQTLPHSAIQRIADKLRSLGFTEET-ETKAPTT----AGEIFIPLPNRLPKYRV 103

Query: 2036 GHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPTVAEL 1857
            G T+D SWSTP NPVP PGSG AI+RYHE++ E+++++E A +  GK       P++AEL
Sbjct: 104  GQTLDPSWSTPENPVPVPGSGKAISRYHELRREVKRERE-AKKGEGK------VPSLAEL 156

Query: 1856 TVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRINMKR 1677
            ++P              ++K+ VGKAGITEGIVNGIHERWRRSEVVKI CEDLCR+NMKR
Sbjct: 157  SLPNEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKR 216

Query: 1676 THETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDPRNDDEV 1497
            TH+ LERKTGGLVVWR GS IVLYRGA+Y+YPYFL++ S+ ++   D +   D   DD+ 
Sbjct: 217  THDLLERKTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSSDAVQNIDV--DDKE 274

Query: 1496 NPEVDNSLGMVGPKSLVEPISSNRLAS-SLVSGVGSPKKVRFILPGEVQLEEDADRLLDG 1320
            + E  + L  V   +  EP SS+ +   SLV GVGSP +VRF LPGE QL E+AD LLDG
Sbjct: 275  DDEEGSVLSAVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEADHLLDG 334

Query: 1319 LGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLRRLGRPLRC 1140
            LGPRF DWWGY+PLPVDADLL  +V GYR+PFRLLPYG+ P LT+ EMT L+RL RPL C
Sbjct: 335  LGPRFNDWWGYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRLSRPLPC 394

Query: 1139 HFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTGGTLISRDR 960
            HFALGRN   QGLA SIVKLWEKCEIAKIAVKRGVQNTNS++MA+ELK LTGGTL+SRDR
Sbjct: 395  HFALGRNTKHQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGTLLSRDR 454

Query: 959  EFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATV-------TPTEHLYV 801
            EFIVLYRGKDFLP AVS+AIE+RR  G  + K   D  +S + +          T     
Sbjct: 455  EFIVLYRGKDFLPSAVSSAIEDRRKRG-DMDKRWTDCITSNETSEELKDRSWRTTNAKST 513

Query: 800  DELQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXXEPLKP 621
            DE+    D+K    SE + LR  DAA+K                              +P
Sbjct: 514  DEIDGTNDRKHDL-SENKNLRSTDAAIKRTSIKLSMALEKKAKAEKLLSELEKSEMSQQP 572

Query: 620  EVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVISKDKSF 441
            E+DKEGITEEERYMLRK+GL+M  +LLMGRRGVFDGTIENMHLHWKYRELVK+I K+KSF
Sbjct: 573  EIDKEGITEEERYMLRKIGLKMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICKEKSF 632

Query: 440  EDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQAMNRSL 261
            + V  +ARTLEAESGGILVAVE VSKG+AII+YRGKNY RP  LRP TLL+KRQAM RSL
Sbjct: 633  QAVQAVARTLEAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPPTLLSKRQAMKRSL 692

Query: 260  QAQRRESLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTESEGAI---TELETSGSGSLK 90
            +AQRRESLKLHVL+LT NI+H+K QLVKD    N     ES+  +   +E        LK
Sbjct: 693  EAQRRESLKLHVLRLTSNIDHLKLQLVKDKEAYNVQCFDESKFQVKGESEEPARTDSELK 752

Query: 89   LSYHEMNVKG*QTGKVIATGCKHG 18
               H  +        +I T  +HG
Sbjct: 753  PDCHSYSTIPADCNVIIETRDEHG 776


>emb|CDP02160.1| unnamed protein product [Coffea canephora]
          Length = 1034

 Score =  774 bits (1998), Expect = 0.0
 Identities = 419/713 (58%), Positives = 507/713 (71%), Gaps = 23/713 (3%)
 Frame = -1

Query: 2243 PPKSL-----SRNSPSPTADTKTVSKTAIQRIAEKLRNLGFLEETKETHH-----PVTGS 2094
            PPK L     +  + + T DT+T+ ++AIQRIAEKLR LG++E+ K+ +      P  G 
Sbjct: 69   PPKLLFCRATATATATATGDTETLPQSAIQRIAEKLRGLGYVEDDKDENKDEDKLPKNGP 128

Query: 2093 GSAGEIFIPPPDQLPVRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIA 1914
             S GEIF+P P QLP  R+GHT+D SWSTP NPVP PGSG AI +YH+++  + K++   
Sbjct: 129  -SPGEIFVPLPSQLPKYRVGHTLDPSWSTPQNPVPLPGSGNAIQKYHQLRRGVIKER--- 184

Query: 1913 ARVVGKRRKRTVPPTVAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWR 1734
               + +R+KR   PT+AEL +P              +KK+ VGKAGITEGIVNGIHERWR
Sbjct: 185  ---IEERKKRETVPTLAELNLPEEELRRLRTLGIRLQKKLKVGKAGITEGIVNGIHERWR 241

Query: 1733 RSEVVKIKCEDLCRINMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDN--- 1563
            R EVVKI+CED+CR+NMKRTHE LE KTGGLVVWRSG+ IVLYRGA+Y+YPYF SD+   
Sbjct: 242  RYEVVKIRCEDICRMNMKRTHELLEMKTGGLVVWRSGTNIVLYRGADYKYPYFFSDDNTA 301

Query: 1562 --SARDKHDVDYISTPDPRNDDEVNPEVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSP 1389
              S R++  VD+       N+ + +    N+L    PKSL     S      L+ GVG+P
Sbjct: 302  NGSLREEASVDFRMDYREDNEKKASSSGGNALRSSVPKSL-----SKVSHPPLIQGVGTP 356

Query: 1388 KKVRFILPGEVQLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPY 1209
             +VRF LPGE QL E+ADRLL+GLGPRFTDWWGY PLPVDAD L   VPGYR+PFRLLPY
Sbjct: 357  NRVRFQLPGEAQLAEEADRLLEGLGPRFTDWWGYEPLPVDADFLPAAVPGYRRPFRLLPY 416

Query: 1208 GIKPKLTDREMTVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQN 1029
            G+KP LT+ EMT+LRRLGRPL CHFALGRNR LQGLA +I+KLWEKCEIAKIAVKRGVQN
Sbjct: 417  GVKPILTNDEMTILRRLGRPLPCHFALGRNRKLQGLAAAIIKLWEKCEIAKIAVKRGVQN 476

Query: 1028 TNSQVMAEELKQLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNH---GTHIGKMR 858
            TNS++MAEELK LTGGTL+SRD+EFIVLYRGKDFLP AVS AIE+RRN+   G   G  +
Sbjct: 477  TNSELMAEELKNLTGGTLLSRDKEFIVLYRGKDFLPAAVSLAIEKRRNYVLDGEEKGADK 536

Query: 857  -MDSGSSVKATVTPTEHLYVDELQEVKDQKRAFTSEQRKLRLKDAAVK----SLDXXXXX 693
               + SS    +  +E+   DE    +DQK    S++R     +AA++     L      
Sbjct: 537  SFTTVSSKDQRLGTSENCNGDENNGKEDQKLELASKRRHRSSTEAAIERTSAKLSKASLQ 596

Query: 692  XXXXXXXXXXXXXXXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDG 513
                                  +PEVDKEGITEEERYMLRK+GLRM  +LL+G+RGVFDG
Sbjct: 597  ALVKKDMAEKLLVELEKEETTQEPEVDKEGITEEERYMLRKIGLRMKPFLLLGKRGVFDG 656

Query: 512  TIENMHLHWKYRELVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGK 333
            TIENMHLHWKYRELVK+I+  +S E+V   ARTLEAESGGILVAVERVSKG AIIVYRGK
Sbjct: 657  TIENMHLHWKYRELVKIITGGRSIEEVTARARTLEAESGGILVAVERVSKGFAIIVYRGK 716

Query: 332  NYKRPTDLRPRTLLNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKD 174
            NY RP  LRPR+LL+KR+AM RSL+AQRRESLKLHVLKLT+NI+ +K QL K+
Sbjct: 717  NYSRPACLRPRSLLSKREAMKRSLEAQRRESLKLHVLKLTQNIDRLKLQLAKE 769


>ref|XP_002517407.1| conserved hypothetical protein [Ricinus communis]
            gi|223543418|gb|EEF44949.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1009

 Score =  771 bits (1990), Expect = 0.0
 Identities = 412/716 (57%), Positives = 504/716 (70%), Gaps = 10/716 (1%)
 Frame = -1

Query: 2204 ADTKTVSKTAIQRIAEKLRNLGFLEETKETH--HPVTGSGSAGEIFIPPPDQLPVRRIGH 2031
            +++KTV  +AIQRIA+KLR+LGF E   E H  +        GEIFIP P++L   R+GH
Sbjct: 46   SNSKTVPSSAIQRIADKLRSLGFAEHNPEPHTRNSAETKQREGEIFIPLPNELSKYRVGH 105

Query: 2030 TIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPTVAELTV 1851
            T+D SWSTP NPVP PGSG AI RYHE++ +++K++E       K+R+  VP T+AEL++
Sbjct: 106  TLDPSWSTPENPVPRPGSGNAILRYHELRKQVKKERE------DKKREAKVP-TLAELSL 158

Query: 1850 PXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRINMKRTH 1671
                           ++K+ VGKAGITEGIVNGIHERWRRSEVVKI CEDLCR+NMKRTH
Sbjct: 159  SEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTH 218

Query: 1670 ETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDPRNDDEVNP 1491
            + LERKTGGLVVWR+GS IVLYRG NY YPYFLSDN+  +   +D +      ND +   
Sbjct: 219  DLLERKTGGLVVWRAGSKIVLYRGVNYIYPYFLSDNTTENDTSIDAVQDTHKHNDSDKIK 278

Query: 1490 EVDNSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEVQLEEDADRLLDGLGP 1311
               +S+   G K      ++  +  +L+ GVG P +VRF LPGE QL E+ D LL+GLGP
Sbjct: 279  SCSSSVD--GVKFSGPSPTNKAVRPALIQGVGLPNRVRFQLPGEAQLAEEVDSLLEGLGP 336

Query: 1310 RFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLRRLGRPLRCHFA 1131
            RF+DWWGY PLPVDADLL  IVPGY+KPFRLLPYGIKP LT+ EMT L+RLGRPL CHF 
Sbjct: 337  RFSDWWGYEPLPVDADLLPAIVPGYQKPFRLLPYGIKPILTNDEMTTLKRLGRPLPCHFV 396

Query: 1130 LGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTGGTLISRDREFI 951
            LGRNR LQGLA SI+KLWEKCEIAKIAVKRGVQNTNS++MAEELK+LTGGTL+SRDREFI
Sbjct: 397  LGRNRKLQGLAASIIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGTLLSRDREFI 456

Query: 950  VLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVTPTEHL--------YVDE 795
            VLYRGKDFLP AVS+AI+ERRNH  ++ K R D+ +S + T    E +          DE
Sbjct: 457  VLYRGKDFLPSAVSSAIKERRNHVFNVAKERTDNSTSAE-TAKEAEDVEDGTSNSGSQDE 515

Query: 794  LQEVKDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXXEPLKPEV 615
                 +Q     S+QRKL     A+K                              +PE+
Sbjct: 516  FHGNNEQSYDL-SKQRKLSFTKEAIKRTSIRLSMALEKKAKAVKLLAEIENSEMSQQPEI 574

Query: 614  DKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVISKDKSFED 435
            DKEGIT+EERYMLRKVGL+M  +LL+GRRGVFDGTIENMHLHWKYRELVK+I K++S   
Sbjct: 575  DKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERSLNA 634

Query: 434  VNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQAMNRSLQA 255
            V+ +A++LEAESGGILVAVERVSKG+AI+VYRGKNY+RP  LRP TLL+KR+AM RSL+A
Sbjct: 635  VHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSKREAMKRSLEA 694

Query: 254  QRRESLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTESEGAITELETSGSGSLKL 87
            QRRESLKLHVL+LT+NIN +K +L+ +    N   R+E E     L      S+ +
Sbjct: 695  QRRESLKLHVLRLTRNINDLKLKLLFN---GNGIGRSEFESLSISLSKESHASVNI 747


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  771 bits (1990), Expect = 0.0
 Identities = 407/707 (57%), Positives = 498/707 (70%), Gaps = 12/707 (1%)
 Frame = -1

Query: 2195 KTVSKTAIQRIAEKLRNLGFLE--ETKETHHPVTGSGSAGEIFIPPPDQLPVRRIGHTID 2022
            +T+ ++AIQRIA+KLR+LGF E    +    P +GS S GEIF+P P+++P  R+GHTID
Sbjct: 55   QTLPQSAIQRIADKLRSLGFSETQNPEPESEPGSGSDSPGEIFVPLPEKIPKYRVGHTID 114

Query: 2021 GSWSTPANPVPEPGSGIA--ITRYHEVKGELEKQKEIAARVVGKRRKRTVPPTVAELTVP 1848
             SWSTP NPVP+PGSG    + R+ E+K E  K   +      K   R VP ++AEL + 
Sbjct: 115  TSWSTPENPVPDPGSGPGSLMARFREMKRERRKVGRV------KEEDRAVP-SLAELKLS 167

Query: 1847 XXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRINMKRTHE 1668
                          ++K+ +GKAGITEGIVNGIHERWRRSEVVKI CED+C++NMKRTHE
Sbjct: 168  AAELRRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHE 227

Query: 1667 TLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDPRNDDEVNPE 1488
             LERKTGGLVVWRSGS I+LYRGANY YPYFL+D  A D  D    ++PD   D+    E
Sbjct: 228  VLERKTGGLVVWRSGSKIILYRGANYRYPYFLADKIATD--DTSSNASPDTNMDNVELHE 285

Query: 1487 VDNSLGMVGPKSLVEPISSNRLASSL-VSGVGSPKKVRFILPGEVQLEEDADRLLDGLGP 1311
             ++    +       P ++N++   + V GVGSP +VRF LPGE +L E+A+ LLDGLGP
Sbjct: 286  TESCSSEINSAKTAIPNATNKMTKPMIVQGVGSPSRVRFQLPGEAELVEEANHLLDGLGP 345

Query: 1310 RFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREMTVLRRLGRPLRCHFA 1131
            RFTDWWGY PLPVD DLL  I+PGYR+PFRLLPYG+KP LT+ EMT LRRLGRPL CHF 
Sbjct: 346  RFTDWWGYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFV 405

Query: 1130 LGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELKQLTGGTLISRDREFI 951
            LGRNR LQGLA SIVK WEKCEIAK+AVKRGVQNTNS++MAEELK LTGGTL+SRD++FI
Sbjct: 406  LGRNRKLQGLAASIVKHWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFI 465

Query: 950  VLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKAT----VTPTEHLYVDELQEV 783
            VLYRGKDFLP AVS+AIEERR H  H+ K   +   S K      V  T+     ++   
Sbjct: 466  VLYRGKDFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTKSGSESKINSA 525

Query: 782  KDQKRAFTSEQRKLRLKDAAVKSLDXXXXXXXXXXXXXXXXXXXXXXXXEPLKPEVDKEG 603
            KDQ+  F  + + ++  +AA++  D                         P + E+DKEG
Sbjct: 526  KDQRSNFFGDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEG 585

Query: 602  ITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYRELVKVISKDKSFEDVNRM 423
            IT+EERYMLRKVGLRM  +LL+GRRGVFDGT+ENMHLHWKYRELVK+ISK+ + E V+++
Sbjct: 586  ITQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQL 645

Query: 422  ARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRTLLNKRQAMNRSLQAQRRE 243
            AR LEAESGGILVAVERVSKG+AIIVYRGKNY+RPT LRP+TLL KRQAM RSL+ QRR+
Sbjct: 646  ARMLEAESGGILVAVERVSKGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRK 705

Query: 242  SLKLHVLKLTKNINHMKQQLVKDDIVANHFQRTESEG---AITELET 111
            SLKLH+L LT+N+N ++ QLV D   AN  Q  E         ELET
Sbjct: 706  SLKLHILNLTRNVNDLEHQLVVDK-EANSMQTVEQSSLPLVQEELET 751


>ref|XP_012082331.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X3 [Jatropha curcas]
          Length = 1097

 Score =  770 bits (1988), Expect = 0.0
 Identities = 412/702 (58%), Positives = 496/702 (70%), Gaps = 21/702 (2%)
 Frame = -1

Query: 2213 SPTADTKTVSKTAIQRIAEKLRNLGFLEETKETHHPVTG-----SGSAGEIFIPPPDQLP 2049
            S T D+KT+  +AI+RIA+KLR+LGF E   +    +       +   GEIFIP P+QLP
Sbjct: 47   SATPDSKTLPHSAIKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLP 106

Query: 2048 VRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPT 1869
              R+GHT+D SWSTP NPVP PG+G AI RYHE++ E++K++E       K+R+  VP T
Sbjct: 107  KYRVGHTLDPSWSTPENPVPIPGAGKAIARYHELRKEVKKERE------AKKREPKVP-T 159

Query: 1868 VAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRI 1689
            +A L++P              ++K+ VGKAGITEGIVNGIHERWRR+EVVKI CEDLCR+
Sbjct: 160  LAVLSLPAEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRM 219

Query: 1688 NMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDPRN 1509
            NMKRTH+ LERKTGGLVVWRSGS IVLYRG NY+YPYF  +N   ++   D +      +
Sbjct: 220  NMKRTHDMLERKTGGLVVWRSGSKIVLYRGVNYKYPYFSPNNITANETSSDAV------H 273

Query: 1508 DDEVNPEVD---------NSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEV 1356
            D+ V+ E D         NSL   G        ++  +  +LV GVGSP +VRF LPGE 
Sbjct: 274  DNHVDCEDDKMGSCSSRANSLRSSGSSE-----TNKMVRPTLVQGVGSPDRVRFELPGEA 328

Query: 1355 QLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREM 1176
            QL E+ D LLDGLGPRFTDWWGY PLPVDADLL  IVPGYRKPFRLLPYG+ PKLTD EM
Sbjct: 329  QLAEEIDSLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEM 388

Query: 1175 TVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELK 996
            T LRRLGRPL CHFALGRNR LQGLA SIVKLWEKCEIAKIAVKRGVQNTNS++MAEELK
Sbjct: 389  TALRRLGRPLPCHFALGRNRKLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 448

Query: 995  QLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVTPT 816
             LTGGTL+SRDREFIVLYRGKDFLP AVS+ I+ERR +  H  K R    S    T+   
Sbjct: 449  WLTGGTLLSRDREFIVLYRGKDFLPSAVSSVIKERRKYLIHGDKQRRHQ-SIAGETLKEA 507

Query: 815  EHLYVDELQEVKDQKRAFTSEQ-------RKLRLKDAAVKSLDXXXXXXXXXXXXXXXXX 657
            E + ++ +    + +    +EQ       +KLR  +AA+K                    
Sbjct: 508  EDIKIETISSGSNDEFNSDNEQSSDLLKDKKLRSLEAAIKRTSIRLSMALENKAKAEKLL 567

Query: 656  XXXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYR 477
                    P +P +DKEGITEEERYMLRK+GL+M  +LL+GRRGVFDGTIENMHLHWKYR
Sbjct: 568  AELENLEMPQQPAIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYR 627

Query: 476  ELVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRT 297
            ELVK+I K++S E    +ARTLE ESGGILVAVERVSKG+AI+VYRGKNY+RP  LRP T
Sbjct: 628  ELVKIICKERSLEAAYEVARTLEVESGGILVAVERVSKGYAIVVYRGKNYRRPARLRPPT 687

Query: 296  LLNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDD 171
            LL+KR+A+ RSL+AQRRESLKLHVLKLT+N+N +K +L KD+
Sbjct: 688  LLSKREALKRSLEAQRRESLKLHVLKLTRNVNDLKLKLAKDE 729


>ref|XP_012082320.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Jatropha curcas]
          Length = 1139

 Score =  770 bits (1988), Expect = 0.0
 Identities = 412/702 (58%), Positives = 496/702 (70%), Gaps = 21/702 (2%)
 Frame = -1

Query: 2213 SPTADTKTVSKTAIQRIAEKLRNLGFLEETKETHHPVTG-----SGSAGEIFIPPPDQLP 2049
            S T D+KT+  +AI+RIA+KLR+LGF E   +    +       +   GEIFIP P+QLP
Sbjct: 47   SATPDSKTLPHSAIKRIADKLRSLGFTEHNPKLPETLNSELERETKQVGEIFIPLPNQLP 106

Query: 2048 VRRIGHTIDGSWSTPANPVPEPGSGIAITRYHEVKGELEKQKEIAARVVGKRRKRTVPPT 1869
              R+GHT+D SWSTP NPVP PG+G AI RYHE++ E++K++E       K+R+  VP T
Sbjct: 107  KYRVGHTLDPSWSTPENPVPIPGAGKAIARYHELRKEVKKERE------AKKREPKVP-T 159

Query: 1868 VAELTVPXXXXXXXXXXXXXXRKKIIVGKAGITEGIVNGIHERWRRSEVVKIKCEDLCRI 1689
            +A L++P              ++K+ VGKAGITEGIVNGIHERWRR+EVVKI CEDLCR+
Sbjct: 160  LAVLSLPAEELRRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRAEVVKIVCEDLCRM 219

Query: 1688 NMKRTHETLERKTGGLVVWRSGSIIVLYRGANYEYPYFLSDNSARDKHDVDYISTPDPRN 1509
            NMKRTH+ LERKTGGLVVWRSGS IVLYRG NY+YPYF  +N   ++   D +      +
Sbjct: 220  NMKRTHDMLERKTGGLVVWRSGSKIVLYRGVNYKYPYFSPNNITANETSSDAV------H 273

Query: 1508 DDEVNPEVD---------NSLGMVGPKSLVEPISSNRLASSLVSGVGSPKKVRFILPGEV 1356
            D+ V+ E D         NSL   G        ++  +  +LV GVGSP +VRF LPGE 
Sbjct: 274  DNHVDCEDDKMGSCSSRANSLRSSGSSE-----TNKMVRPTLVQGVGSPDRVRFELPGEA 328

Query: 1355 QLEEDADRLLDGLGPRFTDWWGYNPLPVDADLLSGIVPGYRKPFRLLPYGIKPKLTDREM 1176
            QL E+ D LLDGLGPRFTDWWGY PLPVDADLL  IVPGYRKPFRLLPYG+ PKLTD EM
Sbjct: 329  QLAEEIDSLLDGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKPFRLLPYGVMPKLTDDEM 388

Query: 1175 TVLRRLGRPLRCHFALGRNRNLQGLAMSIVKLWEKCEIAKIAVKRGVQNTNSQVMAEELK 996
            T LRRLGRPL CHFALGRNR LQGLA SIVKLWEKCEIAKIAVKRGVQNTNS++MAEELK
Sbjct: 389  TALRRLGRPLPCHFALGRNRKLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELK 448

Query: 995  QLTGGTLISRDREFIVLYRGKDFLPPAVSAAIEERRNHGTHIGKMRMDSGSSVKATVTPT 816
             LTGGTL+SRDREFIVLYRGKDFLP AVS+ I+ERR +  H  K R    S    T+   
Sbjct: 449  WLTGGTLLSRDREFIVLYRGKDFLPSAVSSVIKERRKYLIHGDKQRRHQ-SIAGETLKEA 507

Query: 815  EHLYVDELQEVKDQKRAFTSEQ-------RKLRLKDAAVKSLDXXXXXXXXXXXXXXXXX 657
            E + ++ +    + +    +EQ       +KLR  +AA+K                    
Sbjct: 508  EDIKIETISSGSNDEFNSDNEQSSDLLKDKKLRSLEAAIKRTSIRLSMALENKAKAEKLL 567

Query: 656  XXXXXXXEPLKPEVDKEGITEEERYMLRKVGLRMNAYLLMGRRGVFDGTIENMHLHWKYR 477
                    P +P +DKEGITEEERYMLRK+GL+M  +LL+GRRGVFDGTIENMHLHWKYR
Sbjct: 568  AELENLEMPQQPAIDKEGITEEERYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYR 627

Query: 476  ELVKVISKDKSFEDVNRMARTLEAESGGILVAVERVSKGHAIIVYRGKNYKRPTDLRPRT 297
            ELVK+I K++S E    +ARTLE ESGGILVAVERVSKG+AI+VYRGKNY+RP  LRP T
Sbjct: 628  ELVKIICKERSLEAAYEVARTLEVESGGILVAVERVSKGYAIVVYRGKNYRRPARLRPPT 687

Query: 296  LLNKRQAMNRSLQAQRRESLKLHVLKLTKNINHMKQQLVKDD 171
            LL+KR+A+ RSL+AQRRESLKLHVLKLT+N+N +K +L KD+
Sbjct: 688  LLSKREALKRSLEAQRRESLKLHVLKLTRNVNDLKLKLAKDE 729