BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00002176
         (3184 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal doma...  1011   0.0  
ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal doma...   917   0.0  
ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal doma...   908   0.0  
ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphat...   898   0.0  
ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal doma...   880   0.0  
ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal doma...   867   0.0  
gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium r...   867   0.0  
gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium r...   867   0.0  
ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal doma...   867   0.0  
ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal doma...   866   0.0  
ref|XP_011036157.1| PREDICTED: RNA polymerase II C-terminal doma...   857   0.0  
ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prun...   856   0.0  
ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal doma...   854   0.0  
ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal doma...   854   0.0  
ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal doma...   852   0.0  
ref|XP_008222368.1| PREDICTED: RNA polymerase II C-terminal doma...   851   0.0  
ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal doma...   843   0.0  
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   840   0.0  
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu...   840   0.0  
ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphat...   838   0.0  

>ref|XP_010249185.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Nelumbo nucifera]
          Length = 1313

 Score = 1011 bits (2613), Expect = 0.0
 Identities = 557/903 (61%), Positives = 640/903 (70%), Gaps = 20/903 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTR+ PP L +  P+ I    T   D VT     +  +++ +D ALHPY TDAL+AV
Sbjct: 429  LPSPTRKAPPPLPMQKPLSISDG-TPRSDLVT-----NIVEDKMDDTALHPYETDALKAV 482

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            S+YQQKFGRTS L S+RLPSPTP                SS+T G     NS+  ++   
Sbjct: 483  STYQQKFGRTSLLLSDRLPSPTPSEECDDGDGDINGEVSSSTTVGGVATINSSTSLKTVS 542

Query: 2787 STTAPLDGLNGQGR--GKTVGLLGAGSTPILRPIKTRDPRLRIANLNVGASDQKDSPQPV 2614
            S T+  D L+GQG     +VG LG+ S+ ++R  K RDPRLR AN  VG  D    P   
Sbjct: 543  SATSYADNLSGQGLVPAVSVGQLGSMSSHVIRTAKNRDPRLRYANSEVGPLDLNQRPPSG 602

Query: 2613 DNGASKND-LGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGGWLED 2437
            D+   K++ LGGIM SRKHK+V+ES+LD HT K+QRN  ++S  S   +V SGSGGWLE+
Sbjct: 603  DHDIRKSEPLGGIMGSRKHKIVEESLLDDHTFKRQRNGLINSGASGDVQVVSGSGGWLEE 662

Query: 2436 GNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANGGGQPFV------G 2275
             +  G QP+ + +LIE  E D  K  +GE    N+ DT    +    GG   +       
Sbjct: 663  SSSMGLQPTDRSRLIEKRESDPRKLGSGEASFGNKQDTGCSTYNVTTGGNEQLTASGIGS 722

Query: 2274 PVSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPAN----TLQSSSCXXXXXXXXXX 2107
             VSLPSLLKDIAVNPTMLMHLIKME +RLA E  QK  N    T+QSSS           
Sbjct: 723  TVSLPSLLKDIAVNPTMLMHLIKMEHQRLAVEALQKCGNPAQSTMQSSSSSVMPGKIASV 782

Query: 2106 XXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQ----TTSMNSQSESGKVRMKPRDPRRILH 1939
                        T S+P      +KS G SQ    T SM    + GK+RMKPRDPRRILH
Sbjct: 783  NIASK-------TLSEPE-----KKSAGNSQISVQTASMIPHGDLGKIRMKPRDPRRILH 830

Query: 1938 NNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVT-SLHSQSTLP-DIAPQF 1765
            +N  Q+S++S  ++FK  G          DN+  R+QG QA T SL SQST P DIA QF
Sbjct: 831  SNTFQKSDSSGPERFKANGTPSPNTPTCRDNLIVRQQGEQAQTNSLLSQSTAPPDIAQQF 890

Query: 1764 TKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRV-ATDSNDQQSGTGLARE 1588
            TKKL+NIA+ILS SQA NTP  +P  I     P+K +K+D++V ATDSNDQ+S + L  E
Sbjct: 891  TKKLKNIANILSASQAINTPSVVPQTISSQPVPAKMDKVDMKVVATDSNDQRSWSALTPE 950

Query: 1587 EASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXX 1408
            E +      N WGDV+HL EGYDDQQKAAIQ+ERARRIEEQN+MFAARK           
Sbjct: 951  ERAAGPSSQNAWGDVEHLFEGYDDQQKAAIQRERARRIEEQNQMFAARKLCLVLDLDHTL 1010

Query: 1407 LNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYE 1228
            LNSAKF+EVD VH+E+LRKKEE DREKPQRHLFRF HMGMWTKLRPGIWNFLE ASKLYE
Sbjct: 1011 LNSAKFVEVDPVHEEMLRKKEEQDREKPQRHLFRFTHMGMWTKLRPGIWNFLEKASKLYE 1070

Query: 1227 LHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMES 1048
            LHLYTMGN+ YATEMAKVLDPTG LFAGRVISRGDDGDPFD DE+ PK+KDLDGVLGMES
Sbjct: 1071 LHLYTMGNKLYATEMAKVLDPTGVLFAGRVISRGDDGDPFDGDERQPKSKDLDGVLGMES 1130

Query: 1047 AVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSL 868
            AVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQ GL GPSLLEIDHDERPEDGTLASSL
Sbjct: 1131 AVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQLGLHGPSLLEIDHDERPEDGTLASSL 1190

Query: 867  GVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTA 688
             VIERIHQ+FFSH++LN+VDVRNILAAEQ+KIL+ CRIVFSRVFPVGEANPHLHPLWQTA
Sbjct: 1191 AVIERIHQNFFSHQNLNDVDVRNILAAEQQKILAGCRIVFSRVFPVGEANPHLHPLWQTA 1250

Query: 687  QQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFA 508
            +QFGAVCT QIDEQVTHVVA SLGTDKVNWALSTGR VVHPGWVEASALLYRRANE DFA
Sbjct: 1251 EQFGAVCTNQIDEQVTHVVAISLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFA 1310

Query: 507  VKL 499
            +KL
Sbjct: 1311 IKL 1313


>ref|XP_010929653.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Elaeis guineensis]
          Length = 1268

 Score =  917 bits (2369), Expect = 0.0
 Identities = 521/906 (57%), Positives = 599/906 (66%), Gaps = 24/906 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTREN       PP+PI K        V  +     +  E ED   HPY+TDA +AV
Sbjct: 390  LPSPTREN------APPLPIHKPIGFGTGTVVFTEPITPKNVEAEDDTPHPYITDAFKAV 443

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            SSYQQK+    F +SNRLPSPTP                SSS + NA   N+   +Q   
Sbjct: 444  SSYQQKY----FFASNRLPSPTPSEEGNDKDDAHDEVS-SSSANRNAGCVNTTSQIQVAT 498

Query: 2787 STTAPLDGLNGQGRG--KTVGLLGAGSTPILRP-IKTRDPRLRIANLNVG-ASDQKDSPQ 2620
            S+ A  D  +    G  K VG LG+      RP +K+RDPRLR  +   G ASD      
Sbjct: 499  SSAACTDSSSSHQPGTVKPVGQLGSAPNLATRPALKSRDPRLRFVSSESGSASDPNTQVM 558

Query: 2619 PVDNGASKND-LGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGGWL 2443
             +D+ A  N  +GGI + RKHK VDES+ + HTLK+QRN   +S   +   +    GGWL
Sbjct: 559  SLDSSAPNNGPVGGITNPRKHKAVDESLPENHTLKRQRNGLTNS--GDVQMIPGRGGGWL 616

Query: 2442 EDGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANGGGQPF------ 2281
            +D +  GSQPS K +L E+ME+ E+K     VGS  R D+N ++H +N G  P       
Sbjct: 617  DDSSAVGSQPSDKIRLSENMEI-ETKNPVSVVGSDRRPDSNPNIHVSNTGTCPIPSSTAA 675

Query: 2280 -----------VGPVSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPANTLQSSSCX 2134
                          VS PSLLKDIAVNPTMLM LI+MEQ+RL+AE +QK    +Q+ +  
Sbjct: 676  PASSTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQMEQQRLSAEAQQKTVGLMQNMAHA 735

Query: 2133 XXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDP 1954
                                    + P      +   P QT S NSQS+ G++RMKPRDP
Sbjct: 736  SSLNVLSGAVSSATVASMKSTEVGQNPG----GRPQVPPQTVSTNSQSDVGRIRMKPRDP 791

Query: 1953 RRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQSTLPDIA 1774
            RR+LH N+VQ++E  VS++ K  G + S  Q  +D  A  EQG QA       +TLP   
Sbjct: 792  RRVLH-NMVQKNETVVSERAKPNGTLSSDPQSSKDQSAIGEQGEQA-----QATTLP--T 843

Query: 1773 PQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVATDSNDQQSGTGLA 1594
             QF K  +N+ DI S  Q+T TP      I Q +   K  K+D R A             
Sbjct: 844  QQFAKNTKNLGDISSTLQSTTTPPAASQIISQPI-QLKINKVDPRPAAAVVSDPKTLSAV 902

Query: 1593 REEASTTSQRP--NPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXX 1420
              E STT   P  NPWGDVDHLL+GYDDQQKAAIQ+ERARRI EQNKMFAARK       
Sbjct: 903  TSEGSTTGATPSTNPWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAARKLCLVLDL 962

Query: 1419 XXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETAS 1240
                LNSAKF+EVD VH+EILRKKEE DREKPQRHLFRFQHMGMWTKLRPGIW FLE AS
Sbjct: 963  DHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRPGIWTFLEKAS 1022

Query: 1239 KLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVL 1060
            KLYE+HLYTMGN+ YATEMAKVLDPTGTLFAGRVISRGDDGDPFD DE++PK+KDLDGVL
Sbjct: 1023 KLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDGDPFDGDERVPKSKDLDGVL 1082

Query: 1059 GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTL 880
            GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPEDGTL
Sbjct: 1083 GMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDHDERPEDGTL 1142

Query: 879  ASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPL 700
            ASSL VIERIHQ+FFSH SLN++DVRNILAAEQRKIL+ C+IVFSRVFPVGEANPHLHPL
Sbjct: 1143 ASSLAVIERIHQNFFSHHSLNDIDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPL 1202

Query: 699  WQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANE 520
            WQ A+QFGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASALLYRR +E
Sbjct: 1203 WQMAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRVSE 1262

Query: 519  RDFAVK 502
             DFAVK
Sbjct: 1263 HDFAVK 1268


>ref|XP_008791049.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Phoenix dactylifera]
          Length = 1269

 Score =  908 bits (2346), Expect = 0.0
 Identities = 525/915 (57%), Positives = 613/915 (66%), Gaps = 33/915 (3%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTREN       PP+PI K        V  +     +  E ED   HPY+TDA +AV
Sbjct: 391  LPSPTREN------APPLPIHKPIGFGTGTVVFTEPITTKNVEAEDDTPHPYITDAFKAV 444

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            SSYQQK+    F +SN+LPSPTP                SSS +GNA   N+   +Q   
Sbjct: 445  SSYQQKY----FFTSNKLPSPTPSEECDDKDDAHDEVS-SSSANGNAGCVNTTSEIQVAT 499

Query: 2787 STTAPLDGLNGQGRG--KTVGLLGAGSTPILRP-IKTRDPRLRIANLNVG-ASDQKDSPQ 2620
            ++ A  D  +    G  K VG LG+   P +RP +K+RDPRLR  N   G ASD      
Sbjct: 500  NSAACTDSSSRHQPGPVKPVGQLGSAPNPAIRPALKSRDPRLRFVNSESGNASDPNRRAM 559

Query: 2619 PVDNGASKNDL-GGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSG-SGGW 2446
             +D  A  NDL GGI + RKHK VDES  + HTLK+Q+N   +S   +  ++T G  GGW
Sbjct: 560  SLDFSAPNNDLVGGITNPRKHKAVDESFPENHTLKRQKNGLTNS---SDVQMTPGRGGGW 616

Query: 2445 LEDGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANGG--------- 2293
            LED +   SQ S K +L E+ME+ E K     V S  R D+N ++   N G         
Sbjct: 617  LEDSSSVRSQLSDKIRLNENMEI-EIKNPGNVVMSDRRPDSNPNIQVTNTGTCMIPSSTT 675

Query: 2292 --------GQPFVGPVSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPANTLQSSSC 2137
                           VS PSLLKDIAVNPTMLM LI++EQ+RL+AE +QK    + + + 
Sbjct: 676  APSSGTAPSSSAAASVSFPSLLKDIAVNPTMLMQLIQIEQQRLSAEAQQKTVGLMHNMA- 734

Query: 2136 XXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPS-------QTTSMNSQSESGK 1978
                                 V+S+   S+   E  H PS       QT S NSQS+ G+
Sbjct: 735  ----------HASSLNVLPGAVSSANVASMKSAEVGHNPSGRPQVTAQTVSTNSQSDVGR 784

Query: 1977 VRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHS 1798
            +RMKPRDPRRILHN +VQ++E  VS++ K  G + S  Q  +D++A  EQG QA      
Sbjct: 785  IRMKPRDPRRILHN-MVQKNETIVSERAKPNGTLSSDPQSSKDHLAIGEQGEQA------ 837

Query: 1797 QST-LPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIR-VATDS 1624
            Q+T LP +  Q  K  +N+ DI S  Q T TP+ +P  I Q +      K+D+R  A   
Sbjct: 838  QATGLPTL--QLAKNPKNLGDISSPLQLTTTPLAVPQIISQPIQ-FNINKVDLRPAAAVV 894

Query: 1623 NDQQSGTGLAREEASTTS-QRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAA 1447
            ND ++ + +A E ++T + Q  N WGDVDHLL+GYDDQQKAAIQ+ERARRI EQNKMFAA
Sbjct: 895  NDPKTLSTVASEGSTTVATQSTNAWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAA 954

Query: 1446 RKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPG 1267
            RK           LNSAKF+EVD VH+EILRKKEE DREKPQRHLFRFQHMGMWTKLRPG
Sbjct: 955  RKLCLVLDLDHTLLNSAKFVEVDPVHEEILRKKEEQDREKPQRHLFRFQHMGMWTKLRPG 1014

Query: 1266 IWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLP 1087
            IWNFLE ASKLYE+HLYTMGN+ YATEMAKVLDPTGTLFAGRVISRGDD +PFD DE++P
Sbjct: 1015 IWNFLEKASKLYEMHLYTMGNKLYATEMAKVLDPTGTLFAGRVISRGDDSEPFDGDERVP 1074

Query: 1086 KNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDH 907
            K+KDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDH
Sbjct: 1075 KSKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDH 1134

Query: 906  DERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVG 727
            DERPEDGTLASSL VIERIH DFFSHRSLN+VDVRNILAAEQRKIL+ C+IVFSRVFPVG
Sbjct: 1135 DERPEDGTLASSLTVIERIHDDFFSHRSLNDVDVRNILAAEQRKILAGCKIVFSRVFPVG 1194

Query: 726  EANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEAS 547
            EANPHLHPLWQ A+QFGA CT QIDEQVTHVVANSLGTDKVNWALSTGR VVHP WVEAS
Sbjct: 1195 EANPHLHPLWQMAEQFGAACTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPSWVEAS 1254

Query: 546  ALLYRRANERDFAVK 502
            ALLYRR NE+DFAVK
Sbjct: 1255 ALLYRRVNEQDFAVK 1269


>ref|XP_007043830.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao] gi|508707765|gb|EOX99661.1| RNA
            polymerase II C-terminal domain phosphatase-like 3,
            putative [Theobroma cacao]
          Length = 1290

 Score =  898 bits (2320), Expect = 0.0
 Identities = 502/895 (56%), Positives = 609/895 (68%), Gaps = 13/895 (1%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHAR-QEETEDAALHPYVTDALRA 2971
            LPSPTRE  P L V  P+       T+GD +  S     +   + E   LHPY TDAL+A
Sbjct: 410  LPSPTRETTPCLPVNKPL-------TSGDVMVKSGFMTGKGSHDAEGDKLHPYETDALKA 462

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPP 2791
             S+YQQKFG+ SF SS+RLPSPTP                SSS+ GN +   +  ++  P
Sbjct: 463  FSTYQQKFGQGSFFSSDRLPSPTPSEESGDEGGDNGGEVSSSSSIGNFK--PNLPILGHP 520

Query: 2790 VSTTAPL-----DGLNGQGRGKTVGLLGAGSTPILRPI-KTRDPRLRIANLNVGASDQKD 2629
            + ++APL       L GQ   +    + + S  + + + K+RDPRL  AN N  A D  +
Sbjct: 521  IVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSLAKSRDPRLWFANSNASALDLNE 580

Query: 2628 SPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGG 2449
              + + N +    +GGIM SRK K V+E +LD   LK+QRN   +  ++   +  SG GG
Sbjct: 581  --RLLHNASKVAPVGGIMDSRKKKSVEEPILDSPALKRQRNELENLGVARDVQTVSGIGG 638

Query: 2448 WLEDGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANGGGQ-PFVGP 2272
            WLED +  GSQ + + Q  E++E +  K +NG   S   +       G N          
Sbjct: 639  WLEDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSSTLSGKTNITVGTNEQVPVTSTST 698

Query: 2271 VSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXXXXXXXXXXXX 2095
             SLP+LLKDIAVNPTML++++KM +Q+RL AE +QK  + ++S+                
Sbjct: 699  PSLPALLKDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKST--FHQPSSNSLLGVVS 756

Query: 2094 XXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQRSE 1915
                    + +  PS+     S  P+    + S  ESGK+RMKPRDPRR+LH N +QRS 
Sbjct: 757  STNVIPSPSVNNVPSISSGISSK-PAGNLQVPSPDESGKIRMKPRDPRRVLHGNSLQRSG 815

Query: 1914 NSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQSTL---PDIAPQFTKKLRNI 1744
            +   DQ KT G + S  Q  +DN+ A++  +Q   S   QS L   PDI  QFT  L+NI
Sbjct: 816  SMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQT-ESKPMQSQLVPPPDITQQFTNNLKNI 874

Query: 1743 ADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIR-VATDSNDQQSGTGLAREEASTTSQ 1567
            ADI+S SQA  +   +  N+V      K++ +D++ + ++S DQQ+G GLA E  +T  +
Sbjct: 875  ADIMSVSQALTSLPPVSHNLVPQPVLIKSDSMDMKALVSNSEDQQTGAGLAPEAGATGPR 934

Query: 1566 RPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXLNSAKFI 1387
              N WGDV+HL E YDDQQKAAIQ+ERARRIEEQ KMF+ARK           LNSAKFI
Sbjct: 935  SQNAWGDVEHLFERYDDQQKAAIQRERARRIEEQKKMFSARKLCLVLDLDHTLLNSAKFI 994

Query: 1386 EVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYELHLYTMG 1207
            EVD VH+EILRKKEE DREKP+RHLFRF HMGMWTKLRPGIWNFLE ASKLYELHLYTMG
Sbjct: 995  EVDPVHEEILRKKEEQDREKPERHLFRFHHMGMWTKLRPGIWNFLEKASKLYELHLYTMG 1054

Query: 1206 NRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESAVVIIDD 1027
            N+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++P++KDL+GVLGMESAVVIIDD
Sbjct: 1055 NKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESAVVIIDD 1114

Query: 1026 SVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLGVIERIH 847
            SVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSL VIERIH
Sbjct: 1115 SVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIH 1174

Query: 846  QDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQQFGAVC 667
            QDFFSH++L++VDVRNILA+EQRKIL+ CRIVFSRVFPVGEANPHLHPLWQTA+QFGAVC
Sbjct: 1175 QDFFSHQNLDDVDVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVC 1234

Query: 666  TTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAVK 502
            T QIDE VTHVVANSLGTDKVNWALSTG+ VVHPGWVEASALLYRRANE DFA+K
Sbjct: 1235 TNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEVDFAIK 1289


>ref|XP_009421039.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Musa acuminata subsp. malaccensis]
          Length = 1228

 Score =  880 bits (2273), Expect = 0.0
 Identities = 505/895 (56%), Positives = 605/895 (67%), Gaps = 13/895 (1%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTREN P   +  P+ +          V  S  + A+ EE E+A LHPYVTDAL+AV
Sbjct: 363  LPSPTRENLPQFSIPKPIGLGMLP------VVSSQPRTAKNEEAEEATLHPYVTDALKAV 416

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            S YQQ++G TSFLS NRLPSPTP                SSS   NA  A +        
Sbjct: 417  SCYQQRYGSTSFLSINRLPSPTPSEEGDKDDDSHEEAS-SSSVVSNAETACTIQNQAVKS 475

Query: 2787 STTAPLDGLNGQGRG---KTVGLLGAGSTPILRP-IKTRDPRLRIANLNVGASDQKDSPQ 2620
            S+TA     +   +    K VG +G+GS    +P +K RDPRL++ N  V      D  +
Sbjct: 476  SSTAACSNSSAGDQPYPVKLVGQVGSGSKSSAKPALKRRDPRLKLMNNEVRGPSVGD--K 533

Query: 2619 PVDNGASKNDL-GGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGGWL 2443
             +D+ A  N L GG M++RKHK VDE V   H +K+Q+N    S+     ++TSG GGWL
Sbjct: 534  GIDSNALDNRLVGGSMNTRKHKSVDEPVTGDHKMKRQKNGFTGSR---DMQMTSGRGGWL 590

Query: 2442 EDGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANG------GGQPF 2281
            ED +IP  QPS + Q+ E+ +V+  K  +GEVGS  ++D+N +    NG      G  P 
Sbjct: 591  EDSSIP--QPSDRNQINENFQVEVRKPGSGEVGSGKKSDSNMNFSMLNGLIPNPSGNLP- 647

Query: 2280 VGPVSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPANTLQSSSCXXXXXXXXXXXX 2101
               +SLP LLK  AVNPT+ + L++MEQ RLAAE  Q     + +S+             
Sbjct: 648  -NTLSLPPLLK--AVNPTIFVQLLQMEQHRLAAENHQ----IVTASTSDVTNVSKVNGLP 700

Query: 2100 XXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQR 1921
                        S+      +  S  PSQ+ S++SQ++ G++RMKPRDPRR LHNN+VQ 
Sbjct: 701  GAVSSVNSTPLKSQEVGQNHLGMSQIPSQSASVSSQNDVGRIRMKPRDPRRALHNNMVQM 760

Query: 1920 SENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQSTLPDIAPQFTKKL-RNI 1744
                VS+Q K    IP   Q    +  ARE G QA  S+ +   +P   P  +++L +N+
Sbjct: 761  KNVIVSEQNKINEAIPG-PQSSMGHSTAREPGEQAQASVLATQFVPQ--PNMSRQLTKNL 817

Query: 1743 ADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVAT-DSNDQQSGTGLAREEASTTSQ 1567
             +I+S+SQ   T   +P  I     PSK  ++++R A+ + ND  S T ++   A   SQ
Sbjct: 818  GNIVSSSQLAATSQAVPQYI-----PSKANQVNVRPASAELND--SKTLVSEATAKGVSQ 870

Query: 1566 RPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXLNSAKFI 1387
              N WGDVDH L+GY+D+Q+AAIQKERARRI EQNKMFAARK           LNSAKF+
Sbjct: 871  SVNAWGDVDHFLDGYNDEQRAAIQKERARRIAEQNKMFAARKLCLVLDLDHTLLNSAKFV 930

Query: 1386 EVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYELHLYTMG 1207
            EVD VH+EILR+KEE DREKPQRHLF F HMGMWTKLRPGIWNFL+ ASKLYELHLYTMG
Sbjct: 931  EVDPVHEEILRRKEEQDREKPQRHLFCFHHMGMWTKLRPGIWNFLDKASKLYELHLYTMG 990

Query: 1206 NRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESAVVIIDD 1027
            N+ YATEMAKVLDPTGTLF+GRVISRGDD D  D DE++PK+KDLDGVLGMESAVVIIDD
Sbjct: 991  NKLYATEMAKVLDPTGTLFSGRVISRGDDADTVDGDERVPKSKDLDGVLGMESAVVIIDD 1050

Query: 1026 SVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLGVIERIH 847
            S+RVWP NKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSL VIERIH
Sbjct: 1051 SLRVWPLNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIERIH 1110

Query: 846  QDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQQFGAVC 667
            Q+FFSH SL +VDVRNILAAEQRKIL+ CRIVFSRVFPVGEANPHLHPLWQTA+QFGA+C
Sbjct: 1111 QNFFSHHSLKDVDVRNILAAEQRKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAIC 1170

Query: 666  TTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAVK 502
            T QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASALLYRRANE DFAVK
Sbjct: 1171 TNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAVK 1225


>ref|XP_012459418.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Gossypium raimondii]
          Length = 1251

 Score =  867 bits (2239), Expect = 0.0
 Identities = 499/901 (55%), Positives = 600/901 (66%), Gaps = 19/901 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQ-EETEDAALHPYVTDALRA 2971
            LPSPTRE  P L V  P+       TTGD +  S    A+   + E   +HPY TDAL+A
Sbjct: 365  LPSPTRETTPCLPVLRPL-------TTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKA 417

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPP 2791
             SSYQ+KFGR SF SS+RLPSPTP                SSS+ GN +  N  V+  P 
Sbjct: 418  FSSYQRKFGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFK-PNLPVMGHPI 476

Query: 2790 VSTTAPLDGLNG----QGRGKT-----VGLLGAGSTPILRPIKTRDPRLRIANLNVGASD 2638
            VS+   +D  +     QG+  T     V +  A +       K+RDPRLR AN NV A D
Sbjct: 477  VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALD 536

Query: 2637 QKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSG 2458
                 +P+ N +    + GIM  RK K  +E VLDG   K+Q+N  +++      +  SG
Sbjct: 537  LNQ--RPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNE-LENFGVRDVQAVSG 593

Query: 2457 SGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV-GSINRNDTNAHLHGANGGGQPF 2281
            +GGWLED +   SQ + + Q +E+++ +  K E+G    S     TN  ++         
Sbjct: 594  NGGWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTG 653

Query: 2280 VGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXXXXXXXXX 2104
            +   SLP+LLKDIAVNPTML++++KM +Q+RL +E +QK  + L+++             
Sbjct: 654  MSNPSLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVI 713

Query: 2103 XXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQ 1924
                      V      S   + K  G  Q   ++   ES K+RMKPRDPRR+LH N++Q
Sbjct: 714  PPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLD---ESCKIRMKPRDPRRVLHGNVLQ 770

Query: 1923 RSENSVSDQFKTVGVIP-SIAQVGEDNIAAREQGNQAVTSLHSQSTL---PDIAPQFTKK 1756
            +S +   DQ KT G  P S  Q  +DN+ A++Q    + +   Q      PDIA QFT+ 
Sbjct: 771  KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 830

Query: 1755 LRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRV-ATDSNDQQSGTGLAREEAS 1579
            L+NIA ++S  Q+      +  N+V      K+E  D     ++S DQQ+GTG A  EA 
Sbjct: 831  LKNIAGMMSGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKGSNSEDQQTGTGTA-PEAG 889

Query: 1578 TTSQRP--NPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXL 1405
             T   P  N WGDV+HL E YDD+QKAAIQ+ERARRIEEQ KMFAARK           L
Sbjct: 890  VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 949

Query: 1404 NSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYEL 1225
            NSAKFIEVD VH+EILRKKEE DREKPQRHLFRF HMGMWTKLRPGIWNFLE ASKLYEL
Sbjct: 950  NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 1009

Query: 1224 HLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESA 1045
            HLYTMGN+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++P++KDL+GVLGMES+
Sbjct: 1010 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 1069

Query: 1044 VVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLG 865
            VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSL 
Sbjct: 1070 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 1129

Query: 864  VIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQ 685
            VIERIHQ+FFSH++L+++DVRNILA EQRKILS CRIVFSRVFPVGEANPHLHPLWQTA+
Sbjct: 1130 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 1189

Query: 684  QFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAV 505
            QFGAVCT QIDE VTHVVANSLGTDKVNWALSTG+ VVHPGWVEASALLYRRANE DFA+
Sbjct: 1190 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1249

Query: 504  K 502
            K
Sbjct: 1250 K 1250


>gb|KJB77193.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 982

 Score =  867 bits (2239), Expect = 0.0
 Identities = 499/901 (55%), Positives = 600/901 (66%), Gaps = 19/901 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQ-EETEDAALHPYVTDALRA 2971
            LPSPTRE  P L V  P+       TTGD +  S    A+   + E   +HPY TDAL+A
Sbjct: 96   LPSPTRETTPCLPVLRPL-------TTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKA 148

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPP 2791
             SSYQ+KFGR SF SS+RLPSPTP                SSS+ GN +  N  V+  P 
Sbjct: 149  FSSYQRKFGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFK-PNLPVMGHPI 207

Query: 2790 VSTTAPLDGLNG----QGRGKT-----VGLLGAGSTPILRPIKTRDPRLRIANLNVGASD 2638
            VS+   +D  +     QG+  T     V +  A +       K+RDPRLR AN NV A D
Sbjct: 208  VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALD 267

Query: 2637 QKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSG 2458
                 +P+ N +    + GIM  RK K  +E VLDG   K+Q+N  +++      +  SG
Sbjct: 268  LNQ--RPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNE-LENFGVRDVQAVSG 324

Query: 2457 SGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV-GSINRNDTNAHLHGANGGGQPF 2281
            +GGWLED +   SQ + + Q +E+++ +  K E+G    S     TN  ++         
Sbjct: 325  NGGWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTG 384

Query: 2280 VGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXXXXXXXXX 2104
            +   SLP+LLKDIAVNPTML++++KM +Q+RL +E +QK  + L+++             
Sbjct: 385  MSNPSLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVI 444

Query: 2103 XXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQ 1924
                      V      S   + K  G  Q   ++   ES K+RMKPRDPRR+LH N++Q
Sbjct: 445  PPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLD---ESCKIRMKPRDPRRVLHGNVLQ 501

Query: 1923 RSENSVSDQFKTVGVIP-SIAQVGEDNIAAREQGNQAVTSLHSQSTL---PDIAPQFTKK 1756
            +S +   DQ KT G  P S  Q  +DN+ A++Q    + +   Q      PDIA QFT+ 
Sbjct: 502  KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 561

Query: 1755 LRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRV-ATDSNDQQSGTGLAREEAS 1579
            L+NIA ++S  Q+      +  N+V      K+E  D     ++S DQQ+GTG A  EA 
Sbjct: 562  LKNIAGMMSGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKGSNSEDQQTGTGTA-PEAG 620

Query: 1578 TTSQRP--NPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXL 1405
             T   P  N WGDV+HL E YDD+QKAAIQ+ERARRIEEQ KMFAARK           L
Sbjct: 621  VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 680

Query: 1404 NSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYEL 1225
            NSAKFIEVD VH+EILRKKEE DREKPQRHLFRF HMGMWTKLRPGIWNFLE ASKLYEL
Sbjct: 681  NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 740

Query: 1224 HLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESA 1045
            HLYTMGN+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++P++KDL+GVLGMES+
Sbjct: 741  HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 800

Query: 1044 VVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLG 865
            VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSL 
Sbjct: 801  VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 860

Query: 864  VIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQ 685
            VIERIHQ+FFSH++L+++DVRNILA EQRKILS CRIVFSRVFPVGEANPHLHPLWQTA+
Sbjct: 861  VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 920

Query: 684  QFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAV 505
            QFGAVCT QIDE VTHVVANSLGTDKVNWALSTG+ VVHPGWVEASALLYRRANE DFA+
Sbjct: 921  QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 980

Query: 504  K 502
            K
Sbjct: 981  K 981


>gb|KJB77192.1| hypothetical protein B456_012G125200 [Gossypium raimondii]
          Length = 1033

 Score =  867 bits (2239), Expect = 0.0
 Identities = 499/901 (55%), Positives = 600/901 (66%), Gaps = 19/901 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQ-EETEDAALHPYVTDALRA 2971
            LPSPTRE  P L V  P+       TTGD +  S    A+   + E   +HPY TDAL+A
Sbjct: 147  LPSPTRETTPCLPVLRPL-------TTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKA 199

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPP 2791
             SSYQ+KFGR SF SS+RLPSPTP                SSS+ GN +  N  V+  P 
Sbjct: 200  FSSYQRKFGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFK-PNLPVMGHPI 258

Query: 2790 VSTTAPLDGLNG----QGRGKT-----VGLLGAGSTPILRPIKTRDPRLRIANLNVGASD 2638
            VS+   +D  +     QG+  T     V +  A +       K+RDPRLR AN NV A D
Sbjct: 259  VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALD 318

Query: 2637 QKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSG 2458
                 +P+ N +    + GIM  RK K  +E VLDG   K+Q+N  +++      +  SG
Sbjct: 319  LNQ--RPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNE-LENFGVRDVQAVSG 375

Query: 2457 SGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV-GSINRNDTNAHLHGANGGGQPF 2281
            +GGWLED +   SQ + + Q +E+++ +  K E+G    S     TN  ++         
Sbjct: 376  NGGWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTG 435

Query: 2280 VGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXXXXXXXXX 2104
            +   SLP+LLKDIAVNPTML++++KM +Q+RL +E +QK  + L+++             
Sbjct: 436  MSNPSLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVI 495

Query: 2103 XXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQ 1924
                      V      S   + K  G  Q   ++   ES K+RMKPRDPRR+LH N++Q
Sbjct: 496  PPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLD---ESCKIRMKPRDPRRVLHGNVLQ 552

Query: 1923 RSENSVSDQFKTVGVIP-SIAQVGEDNIAAREQGNQAVTSLHSQSTL---PDIAPQFTKK 1756
            +S +   DQ KT G  P S  Q  +DN+ A++Q    + +   Q      PDIA QFT+ 
Sbjct: 553  KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 612

Query: 1755 LRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRV-ATDSNDQQSGTGLAREEAS 1579
            L+NIA ++S  Q+      +  N+V      K+E  D     ++S DQQ+GTG A  EA 
Sbjct: 613  LKNIAGMMSGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKGSNSEDQQTGTGTA-PEAG 671

Query: 1578 TTSQRP--NPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXL 1405
             T   P  N WGDV+HL E YDD+QKAAIQ+ERARRIEEQ KMFAARK           L
Sbjct: 672  VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 731

Query: 1404 NSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYEL 1225
            NSAKFIEVD VH+EILRKKEE DREKPQRHLFRF HMGMWTKLRPGIWNFLE ASKLYEL
Sbjct: 732  NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 791

Query: 1224 HLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESA 1045
            HLYTMGN+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++P++KDL+GVLGMES+
Sbjct: 792  HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 851

Query: 1044 VVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLG 865
            VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSL 
Sbjct: 852  VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 911

Query: 864  VIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQ 685
            VIERIHQ+FFSH++L+++DVRNILA EQRKILS CRIVFSRVFPVGEANPHLHPLWQTA+
Sbjct: 912  VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 971

Query: 684  QFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAV 505
            QFGAVCT QIDE VTHVVANSLGTDKVNWALSTG+ VVHPGWVEASALLYRRANE DFA+
Sbjct: 972  QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1031

Query: 504  K 502
            K
Sbjct: 1032 K 1032


>ref|XP_012459417.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Gossypium raimondii]
            gi|763810289|gb|KJB77191.1| hypothetical protein
            B456_012G125200 [Gossypium raimondii]
          Length = 1272

 Score =  867 bits (2239), Expect = 0.0
 Identities = 499/901 (55%), Positives = 600/901 (66%), Gaps = 19/901 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQ-EETEDAALHPYVTDALRA 2971
            LPSPTRE  P L V  P+       TTGD +  S    A+   + E   +HPY TDAL+A
Sbjct: 386  LPSPTRETTPCLPVLRPL-------TTGDGMVRSGFMMAKGLPDAERNKMHPYETDALKA 438

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPP 2791
             SSYQ+KFGR SF SS+RLPSPTP                SSS+ GN +  N  V+  P 
Sbjct: 439  FSSYQRKFGRGSFFSSDRLPSPTPSEESGDEGCDTGGEVSSSSSIGNFK-PNLPVMGHPI 497

Query: 2790 VSTTAPLDGLNG----QGRGKT-----VGLLGAGSTPILRPIKTRDPRLRIANLNVGASD 2638
            VS+   +D  +     QG+  T     V +  A +       K+RDPRLR AN NV A D
Sbjct: 498  VSSAPHIDSASSTSSMQGQFTTQNATPVTVSSASNILSKASAKSRDPRLRFANSNVSALD 557

Query: 2637 QKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSG 2458
                 +P+ N +    + GIM  RK K  +E VLDG   K+Q+N  +++      +  SG
Sbjct: 558  LNQ--RPLHNASKVPPVSGIMDPRKKKSTEEPVLDGPAPKRQKNE-LENFGVRDVQAVSG 614

Query: 2457 SGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV-GSINRNDTNAHLHGANGGGQPF 2281
            +GGWLED +   SQ + + Q +E+++ +  K E+G    S     TN  ++         
Sbjct: 615  NGGWLEDTDNCESQITNRNQTMETLDSNSRKMEHGVTCSSTLSGKTNTTVNKNEQVPLTG 674

Query: 2280 VGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXXXXXXXXX 2104
            +   SLP+LLKDIAVNPTML++++KM +Q+RL +E +QK  + L+++             
Sbjct: 675  MSNPSLPALLKDIAVNPTMLINILKMGQQQRLPSESQQKTPDPLKNTLYQPSSNPVLGVI 734

Query: 2103 XXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQ 1924
                      V      S   + K  G  Q   ++   ES K+RMKPRDPRR+LH N++Q
Sbjct: 735  PPANVIPSPSVNVVPSSSSGTLSKPAGNLQGPPLD---ESCKIRMKPRDPRRVLHGNVLQ 791

Query: 1923 RSENSVSDQFKTVGVIP-SIAQVGEDNIAAREQGNQAVTSLHSQSTL---PDIAPQFTKK 1756
            +S +   DQ KT G  P S  Q  +DN+ A++Q    + +   Q      PDIA QFT+ 
Sbjct: 792  KSGSVGPDQLKTNGTSPASSTQGSKDNMNAQKQLENQIEAKPIQCQFVPPPDIAQQFTQS 851

Query: 1755 LRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRV-ATDSNDQQSGTGLAREEAS 1579
            L+NIA ++S  Q+      +  N+V      K+E  D     ++S DQQ+GTG A  EA 
Sbjct: 852  LKNIAGMMSGPQSFAGLPAVSQNLVSQPIQVKSETADKNTKGSNSEDQQTGTGTA-PEAG 910

Query: 1578 TTSQRP--NPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXL 1405
             T   P  N WGDV+HL E YDD+QKAAIQ+ERARRIEEQ KMFAARK           L
Sbjct: 911  VTCPPPSQNAWGDVEHLFEKYDDRQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLL 970

Query: 1404 NSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYEL 1225
            NSAKFIEVD VH+EILRKKEE DREKPQRHLFRF HMGMWTKLRPGIWNFLE ASKLYEL
Sbjct: 971  NSAKFIEVDPVHEEILRKKEEQDREKPQRHLFRFHHMGMWTKLRPGIWNFLEKASKLYEL 1030

Query: 1224 HLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESA 1045
            HLYTMGN+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++P++KDL+GVLGMES+
Sbjct: 1031 HLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPRSKDLEGVLGMESS 1090

Query: 1044 VVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLG 865
            VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDERPEDGTLASSL 
Sbjct: 1091 VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLA 1150

Query: 864  VIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQ 685
            VIERIHQ+FFSH++L+++DVRNILA EQRKILS CRIVFSRVFPVGEANPHLHPLWQTA+
Sbjct: 1151 VIERIHQNFFSHQNLDDLDVRNILATEQRKILSGCRIVFSRVFPVGEANPHLHPLWQTAE 1210

Query: 684  QFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAV 505
            QFGAVCT QIDE VTHVVANSLGTDKVNWALSTG+ VVHPGWVEASALLYRRANE DFA+
Sbjct: 1211 QFGAVCTNQIDEHVTHVVANSLGTDKVNWALSTGKFVVHPGWVEASALLYRRANEHDFAI 1270

Query: 504  K 502
            K
Sbjct: 1271 K 1271


>ref|XP_009386584.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Musa acuminata subsp. malaccensis]
          Length = 1251

 Score =  866 bits (2238), Expect = 0.0
 Identities = 499/897 (55%), Positives = 606/897 (67%), Gaps = 15/897 (1%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTRE  P   V  P+        +   +T      A+ EE E A    YVTDAL+AV
Sbjct: 379  LPSPTRETMPRFPVPKPVGHAMVPVLSSQSLT------AKSEEAEGATSQLYVTDALKAV 432

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            S YQQK+G+ S LS+NRLPSPTP                SSS  GNA+   +        
Sbjct: 433  SFYQQKYGKNSILSNNRLPSPTPSEEGDKDDDSHEEVS-SSSVAGNAKTFYTATQQVSKS 491

Query: 2787 STTAPLDGLNGQGRG--KTVGLLGAGSTPILRP-IKTRDPRLRIANLNV-GASDQKDSPQ 2620
            S+ A     +   R   K    + +G+ P ++P +K RDPRLR  N  V G S+++   +
Sbjct: 492  SSNATHTNSSPVDRCPVKLAEQVQSGTKPAVKPALKRRDPRLRFMNNEVRGPSEERSGIR 551

Query: 2619 PVDNGASKNDLGGIMSSRKHKVVDES--VLDGHTLKKQRNSSMDSKLSNSARVTSGSGGW 2446
               N      LGG +++RKHK+ DES  V+D  T+K+QRN SM S+   +  V SGS  W
Sbjct: 552  C--NAPDDGFLGGTINARKHKIADESAAVVD-QTMKRQRNGSMSSR---NMHVISGSSEW 605

Query: 2445 LE-DGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANG-----GGQP 2284
            LE D  IP  QPS + Q+ E++  D  K   GEVG     ++NA+    NG        P
Sbjct: 606  LEGDSIIP--QPSERSQVNENLHADIRKAGTGEVGFDKEPNSNANFSMLNGLKPNSSSNP 663

Query: 2283 FVGPVSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPANTLQSSSCXXXXXXXXXXX 2104
              GP+SLPSLLK  AVNPT+L+ L+KMEQ+RLAAE +Q     + +S+            
Sbjct: 664  -AGPISLPSLLK--AVNPTILVQLLKMEQQRLAAENQQN----VTTSTSDITNVSSVSGL 716

Query: 2103 XXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRILHNNIVQ 1924
                         S  P   ++  S    Q+ SM+SQ++ G++RMKPRDPRRILHNNIVQ
Sbjct: 717  PGAVSSVISTPVRSNEPGQNQLGISQVSPQSASMSSQNDLGRIRMKPRDPRRILHNNIVQ 776

Query: 1923 RSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQ--STLPDIAPQFTKKLR 1750
            ++E   S+Q    G      Q    ++ ARE G QA +++     S  PD + + TK   
Sbjct: 777  KNEVVASEQNNINGATAG-PQGTMGHLTAREAGEQAQSNILPTQFSPPPDRSEELTK--- 832

Query: 1749 NIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVA-TDSNDQQSGTGLAREEASTT 1573
            N+  I+S+ Q T T  TIP    Q +  SK  ++D+++A  + ND ++ + +  E ++  
Sbjct: 833  NLPTIVSSLQLTTTSPTIPHGNSQPIS-SKGNQMDVKLALAEVNDPKTVSDVLSERSAGV 891

Query: 1572 SQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXXLNSAK 1393
            S+  N WGDVDHLL+GY+D+QKAAIQ+ERARRI EQNKMFAARK           LNSAK
Sbjct: 892  SESTNLWGDVDHLLDGYNDEQKAAIQRERARRIVEQNKMFAARKLCLVLDLDHTLLNSAK 951

Query: 1392 FIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYELHLYT 1213
            F+EVD VH+E+LR+KEE DREKPQRH++ FQHMGMWTKLRPGIWNFLE ASKLYELHLYT
Sbjct: 952  FVEVDPVHEEVLRRKEEQDREKPQRHIYCFQHMGMWTKLRPGIWNFLEKASKLYELHLYT 1011

Query: 1212 MGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMESAVVII 1033
            MGN+ YATEMAKVLDPTG+LF+GRVISRGDDGDP + DE++PK+KDLDGVLGMESAVVII
Sbjct: 1012 MGNKLYATEMAKVLDPTGSLFSGRVISRGDDGDPLNGDERVPKSKDLDGVLGMESAVVII 1071

Query: 1032 DDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLGVIER 853
            DDSVRVWPHNKLNLIVVERYT+FPSSRRQFGLLGPSLLEIDHDERPEDGTLASSL VIER
Sbjct: 1072 DDSVRVWPHNKLNLIVVERYTFFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSLAVIER 1131

Query: 852  IHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTAQQFGA 673
            IHQ+FFSH S+ + DVRNILA+EQRKIL+ CRIVFSRVFPVGEANPHLHPLWQTA+QFGA
Sbjct: 1132 IHQNFFSHHSIKDADVRNILASEQRKILTGCRIVFSRVFPVGEANPHLHPLWQTAEQFGA 1191

Query: 672  VCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDFAVK 502
            VCT+QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASALLYRR NE DFAVK
Sbjct: 1192 VCTSQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRVNEHDFAVK 1248


>ref|XP_011036157.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Populus euphratica]
          Length = 1100

 Score =  857 bits (2214), Expect = 0.0
 Identities = 485/914 (53%), Positives = 590/914 (64%), Gaps = 32/914 (3%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEET-EDAALHPYVTDALRA 2971
            LPSPT+E       T P P+++     GD +  S L   +     E+  +HPY TDAL+A
Sbjct: 213  LPSPTQE-------TTPFPVQRL-FAIGDGMVSSELSVPKMAPVAEEPRMHPYETDALKA 264

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQ-- 2797
            VSSYQQKF R SF + N LPSPTP                SSST  N R  N  V  Q  
Sbjct: 265  VSSYQQKFNRNSFFT-NELPSPTPSEESGNGDVDTAGEVSSSSTVVNYRTVNPPVSDQKN 323

Query: 2796 -------PPVSTTAPLDGLNGQGRGKTVGLLGAG-STPILRPIKTRDPRLRIANLNVGAS 2641
                   PP S+      + G    +    + +G S+ I    K+RDPRLR  N++  A 
Sbjct: 324  ASPPPPPPPPSSHPDSSNILGVVPTRNCAPVSSGPSSTIKASAKSRDPRLRYVNIDASAL 383

Query: 2640 DQKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTS 2461
            D      P+ N   + +  G +   K + ++E VLDG +LK+QRNS  +          +
Sbjct: 384  DHNQRALPMVNNLPRVEPAGAIVGSKKQKIEEDVLDGPSLKRQRNSFDNYGAVRDIESMT 443

Query: 2460 GSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV----GSINRNDTNAHLHGANGG 2293
            G+GGWLED ++   Q   K Q  E++E    +  NG V    GS+  N     ++G+   
Sbjct: 444  GTGGWLEDTDMAEPQTVNKNQWAENVEPGH-RINNGFVCPSSGSVKSN-----VNGSGNA 497

Query: 2292 GQPFVG----------------PVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKP 2164
              PF+G                  SLP LLKDIAVNPTML++++KM +Q+RLA +G+Q  
Sbjct: 498  QSPFMGISNITGSEQAQVTSTATTSLPDLLKDIAVNPTMLINILKMGQQQRLALDGQQTL 557

Query: 2163 ANTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSES 1984
            ++  +S+S                      V SS+P  +L   +  G    + + +  ES
Sbjct: 558  SDPAKSTS------HPSISNSVLGAISTVNVASSQPSGILP--RPAGTQVPSQIATSDES 609

Query: 1983 GKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSL 1804
            GK+RMKPRDPRR LHNN +QR+ +  S+QFKT  + P+     +D     ++G   + S 
Sbjct: 610  GKIRMKPRDPRRFLHNNSLQRAGSLGSEQFKTTTLTPTTQGTKDDQNVQEQEGLAELKS- 668

Query: 1803 HSQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVATDS 1624
               +  PDI+  FTK L NIADILS SQA+ TP  I  N+      +K+E++D +     
Sbjct: 669  ---TVPPDISFPFTKSLENIADILSVSQASTTPPFISQNVASQPMQTKSERVDGKTGISI 725

Query: 1623 NDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAAR 1444
            +DQ++G   + E  + +S   N W DV+HL EGYDDQQKAAIQ+ERARR+EEQ KMFAAR
Sbjct: 726  SDQKTGPASSAEVVAASSHLQNTWKDVEHLFEGYDDQQKAAIQRERARRMEEQKKMFAAR 785

Query: 1443 KXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGI 1264
            K           LNSAKF+EVD VHDEILRKKEE DREKP RH+FRF HMGMWTKLRPGI
Sbjct: 786  KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHIFRFPHMGMWTKLRPGI 845

Query: 1263 WNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPK 1084
            WNFLE ASKL+ELHLYTMGN+ YATEMAKVLDP G LFAGRVISRGDDGDPFD DE++PK
Sbjct: 846  WNFLEKASKLFELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPK 905

Query: 1083 NKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHD 904
            +KDL+GVLGMES VVIIDDSVRVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHD
Sbjct: 906  SKDLEGVLGMESGVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHD 965

Query: 903  ERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGE 724
            ERPEDGTLA SL VIE+IHQ+FF+HRSL+E DVRNILA+EQRKIL  CRI+FSRVFPVGE
Sbjct: 966  ERPEDGTLACSLAVIEKIHQNFFTHRSLDEADVRNILASEQRKILGGCRILFSRVFPVGE 1025

Query: 723  ANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASA 544
              PHLHPLWQ A+QFGAVC  QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASA
Sbjct: 1026 VKPHLHPLWQMAEQFGAVCINQIDEQVTHVVANSLGTDKVNWALSTGRIVVHPGWVEASA 1085

Query: 543  LLYRRANERDFAVK 502
            LLYRRANE+DFA+K
Sbjct: 1086 LLYRRANEQDFAIK 1099


>ref|XP_007225412.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
            gi|462422348|gb|EMJ26611.1| hypothetical protein
            PRUPE_ppa000589mg [Prunus persica]
          Length = 1085

 Score =  856 bits (2212), Expect = 0.0
 Identities = 497/917 (54%), Positives = 590/917 (64%), Gaps = 24/917 (2%)
 Frame = -2

Query: 3180 LPSPTRENPLILPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAAL 3001
            LPSPTRE P   P          LV     +K    T    V ++          ED+ L
Sbjct: 216  LPSPTRETPSCFPVQN------TLVVADGMVKSASDTATARVALN---------AEDSRL 260

Query: 3000 HPYVTDALRAVSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNAR- 2824
            H Y T+AL+AVSSYQQKF R+SFL S RLPSPTP              EVSSS   N R 
Sbjct: 261  HSYETEALKAVSSYQQKFNRSSFLMSERLPSPTP-SEDGGNGDDDTGGEVSSSFASNLRT 319

Query: 2823 ----IANSNVVMQPPVSTTAPLDGLNGQGRGKTVGLLGAGSTP---ILRPIKTRDPRLRI 2665
                I+   +V   P+   +P    + QGR          S P   I    K+RDPRLR 
Sbjct: 320  SCPPISGRQIVSPSPIPVGSP----SMQGRATAKSAAPPNSEPSMTIKASAKSRDPRLRF 375

Query: 2664 ANLNVGASDQKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKL 2485
            AN ++GA +    P  V + A K D    +SSRK K ++ES  DG  LK+QRN+  +S +
Sbjct: 376  ANSDMGALNLNQQPSTVVHSAPKVDSVITLSSRKQKPLEESRFDGPALKRQRNALENSGI 435

Query: 2484 SNSARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDE-------SKCENGEVGSINRND 2326
               A+  SGSGGWLED    G   + K Q +E+ E D        S     +  +   N 
Sbjct: 436  VGDAKTASGSGGWLEDIGGVGPHLNSKNQTVENAETDPRNVVKVLSSPSTVDCNTNGPNS 495

Query: 2325 TNAH--LHGANGGGQPFVGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANT 2155
             N H  L GA+          SLP LLKDIAVNPTML++L+KM +Q+R+A+E  QK A+ 
Sbjct: 496  ANEHVSLMGAS--------MASLPELLKDIAVNPTMLLNLLKMGQQQRVASEAHQKSADP 547

Query: 2154 LQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQ----SE 1987
             ++ +                         SK   +L+      P+ T  ++SQ     E
Sbjct: 548  PKTMT-------HPTSSSSILVSAALGNVPSKTSGILQT-----PAGTLPVSSQKALMDE 595

Query: 1986 SGKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTS 1807
            SGKVRMKPRDPRR LH N +Q+S +   +QF+ +    S  Q  +DN+       QA   
Sbjct: 596  SGKVRMKPRDPRRALHGNALQKSGSLGQEQFRNIIPPLSAIQGNKDNL-----NGQADKK 650

Query: 1806 LHSQSTL--PDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVA 1633
            L +  +L  PDI  QFTK L+NIADI+S S  + +P     ++   + P K E++D++  
Sbjct: 651  LVTSQSLDAPDITRQFTKNLKNIADIMSVSNVSTSPAIASQSVSSQLVPIKPERIDLKPE 710

Query: 1632 TDSNDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMF 1453
                +  S +  A   A+  S+ P  WGDV+HL EGYDDQQKAAIQ+ER RRIEEQ KMF
Sbjct: 711  EQRPESISASEAA---AAGPSRSPVMWGDVEHLFEGYDDQQKAAIQRERTRRIEEQKKMF 767

Query: 1452 AARKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLR 1273
            AA K           LNSAKF+EVD VHDEILRKKEE DREKPQRHLFRF HMGMWTKLR
Sbjct: 768  AAHKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPQRHLFRFHHMGMWTKLR 827

Query: 1272 PGIWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEK 1093
            PGIWNFLE AS+L+ELHLYTMGN+ YATEMAKVLDPTG LFAGRVISRGDDGDP D DE+
Sbjct: 828  PGIWNFLEKASQLFELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPEDGDER 887

Query: 1092 LPKNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEI 913
            +PK+KDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEI
Sbjct: 888  IPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEI 947

Query: 912  DHDERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFP 733
            DHDER EDGTLASSL VIE+IHQ FFSH SL+E DVRNILA+EQRKIL+ CRIVFSRVFP
Sbjct: 948  DHDERQEDGTLASSLAVIEKIHQLFFSHSSLDEADVRNILASEQRKILAGCRIVFSRVFP 1007

Query: 732  VGEANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVE 553
            VGE  PHLHPLWQTA+QFGAVCT QID+QVTHVVANSLGTDKVNWALS+G++VVHPGWVE
Sbjct: 1008 VGEVKPHLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVE 1067

Query: 552  ASALLYRRANERDFAVK 502
            ASALLYRRANE+DFA+K
Sbjct: 1068 ASALLYRRANEQDFAIK 1084


>ref|XP_010656786.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X2 [Vitis vinifera]
          Length = 1276

 Score =  854 bits (2207), Expect = 0.0
 Identities = 493/914 (53%), Positives = 582/914 (63%), Gaps = 32/914 (3%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPT + P         P+ K++  T     ++H       ET+D+ +HPY TDAL+AV
Sbjct: 405  LPSPTGKAPQCF------PVNKSELVTAK---VAH-------ETQDSIMHPYETDALKAV 448

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            S+YQQKFG TSFL  ++LPSPTP                SSST      AN+  +  P V
Sbjct: 449  STYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIV 508

Query: 2787 STTAPLDGLNGQGR--GKTVGLLGAGS-----------------------TPILRP-IKT 2686
            S+   +D    QG   G+   L+ +G                          ILR   K+
Sbjct: 509  SSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVQGLVVPRNTGAVNSRFNSILRASAKS 568

Query: 2685 RDPRLRIANLNVGASDQKDSPQP-VDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQR 2509
            RDPRLR+A+ + G+ D  + P P V N    + LG I+SSRK K  +E +LDG   K+QR
Sbjct: 569  RDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQR 628

Query: 2508 NSSMDSKLSNSARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENG-EVGSINR 2332
            N          A+    SGGWLED N    Q   + QLIE+   D  K E+   V  I  
Sbjct: 629  NGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVTVTGIGC 688

Query: 2331 NDTNAHLHGANGGGQPFVGP---VSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPA 2161
            +     ++G      P V      SL SLLKDIAVNP + M++    +++ + +  +   
Sbjct: 689  DKPYVTVNGNEH--LPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTV 746

Query: 2160 NTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESG 1981
                S+S                          KP   L++       QT  MN Q ESG
Sbjct: 747  LPPTSNSILGVVPPASVAPLKPSAL------GQKPAGALQVP------QTGPMNPQDESG 794

Query: 1980 KVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLH 1801
            KVRMKPRDPRRILH N  QRS +S S+QFKT       AQ  ED    +   + +V    
Sbjct: 795  KVRMKPRDPRRILHANSFQRSGSSGSEQFKTN------AQKQEDQTETKSVPSHSVNP-- 846

Query: 1800 SQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVA-TDS 1624
                 PDI+ QFTK L+NIAD++S SQA++   T P  +        T+++D++   +DS
Sbjct: 847  -----PDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKATVSDS 901

Query: 1623 NDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAAR 1444
             DQ +  G   E A+   Q  N WGDV+HL +GYDDQQKAAIQ+ERARRIEEQ KMF+AR
Sbjct: 902  GDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKMFSAR 961

Query: 1443 KXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGI 1264
            K           LNSAKF+EVD VHDEILRKKEE DREK QRHLFRF HMGMWTKLRPGI
Sbjct: 962  KLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKLRPGI 1021

Query: 1263 WNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPK 1084
            WNFLE ASKLYELHLYTMGN+ YATEMAKVLDP G LFAGRVIS+GDDGD  D DE++PK
Sbjct: 1022 WNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDERVPK 1081

Query: 1083 NKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHD 904
            +KDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHD
Sbjct: 1082 SKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHD 1141

Query: 903  ERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGE 724
            ERPEDGTLASSL VIERIHQ FFS+R+L+EVDVRNILA+EQRKIL+ CRIVFSRVFPVGE
Sbjct: 1142 ERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVFPVGE 1201

Query: 723  ANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASA 544
            ANPHLHPLWQTA+ FGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEASA
Sbjct: 1202 ANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASA 1261

Query: 543  LLYRRANERDFAVK 502
            LLYRRANE+DFA+K
Sbjct: 1262 LLYRRANEQDFAIK 1275


>ref|XP_010656784.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            isoform X1 [Vitis vinifera]
          Length = 1285

 Score =  854 bits (2207), Expect = 0.0
 Identities = 494/918 (53%), Positives = 586/918 (63%), Gaps = 36/918 (3%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPT + P         P+ K++  T     ++H       ET+D+ +HPY TDAL+AV
Sbjct: 405  LPSPTGKAPQCF------PVNKSELVTAK---VAH-------ETQDSIMHPYETDALKAV 448

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            S+YQQKFG TSFL  ++LPSPTP                SSST      AN+  +  P V
Sbjct: 449  STYQQKFGLTSFLPIDKLPSPTPSEESGDTYGDISGEVSSSSTISAPITANAPALGHPIV 508

Query: 2787 STTAPLDGLNGQGR--GKTVGLLGAGS-----------------------TPILRP-IKT 2686
            S+   +D    QG   G+   L+ +G                          ILR   K+
Sbjct: 509  SSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVQGLVVPRNTGAVNSRFNSILRASAKS 568

Query: 2685 RDPRLRIANLNVGASDQKDSPQP-VDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQR 2509
            RDPRLR+A+ + G+ D  + P P V N    + LG I+SSRK K  +E +LDG   K+QR
Sbjct: 569  RDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQR 628

Query: 2508 NSSMDSKLSNSARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENG-EVGSINR 2332
            N          A+    SGGWLED N    Q   + QLIE+   D  K E+   V  I  
Sbjct: 629  NGLTSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVTVTGIGC 688

Query: 2331 NDTNAHLHGANGGGQPFVGP---VSLPSLLKDIAVNPTMLMHLIKMEQERLAAEGRQKPA 2161
            +     ++G      P V      SL SLLKDIAVNP + M++    +++ + +  +   
Sbjct: 689  DKPYVTVNGNEH--LPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTV 746

Query: 2160 NTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNS----Q 1993
                S+S                          KP   L++ ++ GP   TS N+    Q
Sbjct: 747  LPPTSNSILGVVPPASVAPLKPSAL------GQKPAGALQVPQT-GPMLVTSCNNAQNPQ 799

Query: 1992 SESGKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAV 1813
             ESGKVRMKPRDPRRILH N  QRS +S S+QFKT       AQ  ED    +   + +V
Sbjct: 800  DESGKVRMKPRDPRRILHANSFQRSGSSGSEQFKTN------AQKQEDQTETKSVPSHSV 853

Query: 1812 TSLHSQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVA 1633
                     PDI+ QFTK L+NIAD++S SQA++   T P  +        T+++D++  
Sbjct: 854  NP-------PDISQQFTKNLKNIADLMSASQASSMTPTFPQILSSQSVQVNTDRMDVKAT 906

Query: 1632 -TDSNDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKM 1456
             +DS DQ +  G   E A+   Q  N WGDV+HL +GYDDQQKAAIQ+ERARRIEEQ KM
Sbjct: 907  VSDSGDQLTANGSKPESAAGPPQSKNTWGDVEHLFDGYDDQQKAAIQRERARRIEEQKKM 966

Query: 1455 FAARKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKL 1276
            F+ARK           LNSAKF+EVD VHDEILRKKEE DREK QRHLFRF HMGMWTKL
Sbjct: 967  FSARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKSQRHLFRFPHMGMWTKL 1026

Query: 1275 RPGIWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDE 1096
            RPGIWNFLE ASKLYELHLYTMGN+ YATEMAKVLDP G LFAGRVIS+GDDGD  D DE
Sbjct: 1027 RPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVISKGDDGDVLDGDE 1086

Query: 1095 KLPKNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLE 916
            ++PK+KDL+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLE
Sbjct: 1087 RVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLE 1146

Query: 915  IDHDERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVF 736
            IDHDERPEDGTLASSL VIERIHQ FFS+R+L+EVDVRNILA+EQRKIL+ CRIVFSRVF
Sbjct: 1147 IDHDERPEDGTLASSLAVIERIHQSFFSNRALDEVDVRNILASEQRKILAGCRIVFSRVF 1206

Query: 735  PVGEANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWV 556
            PVGEANPHLHPLWQTA+ FGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWV
Sbjct: 1207 PVGEANPHLHPLWQTAESFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWV 1266

Query: 555  EASALLYRRANERDFAVK 502
            EASALLYRRANE+DFA+K
Sbjct: 1267 EASALLYRRANEQDFAIK 1284


>ref|XP_012088736.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Jatropha curcas] gi|643708360|gb|KDP23276.1|
            hypothetical protein JCGZ_23109 [Jatropha curcas]
          Length = 1283

 Score =  852 bits (2200), Expect = 0.0
 Identities = 490/903 (54%), Positives = 589/903 (65%), Gaps = 21/903 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAALHPYVTDALRAV 2968
            LPSPTRE        PP+P+++  T    +V +         + ED  +HPY TDAL+AV
Sbjct: 418  LPSPTRE------AAPPLPVRRVSTP---KVAL---------DNEDTKMHPYETDALKAV 459

Query: 2967 SSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQPPV 2788
            SSYQQKF R+SF  ++RLPSPTP                SSS  G  R AN     Q  V
Sbjct: 460  SSYQQKFNRSSFAVNDRLPSPTPSEESGNGDGDVGGEVSSSSAVGQFRPANPPNSGQSIV 519

Query: 2787 STTAPLDGLNGQG--RGKTVGLLGAGSTPILRP-IKTRDPRLRIANLNVGASDQKDSPQP 2617
            ST+   +  N QG    K  G + +GS+  ++   K+RDPRLR  N +  A DQ      
Sbjct: 520  STSPHPESSNMQGVVPAKNAGPVSSGSSLTVKASAKSRDPRLRFVNSDANALDQNHVLPL 579

Query: 2616 VDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGGWLED 2437
            V+N      LGG M+ +K K VD+SVLDG +LK+QRN    S    + +    SGGWLED
Sbjct: 580  VNNTPKVEYLGGPMNLKKQKSVDDSVLDGPSLKRQRNVLEHSGGVGNVKTMIASGGWLED 639

Query: 2436 GNIPGSQPSRKEQLIESMEVDESKCENGEVG----------SINRNDTNAHLH-GANGGG 2290
             ++   Q   + QL+E+   D  + +NG             SI+ N+    +  GA   G
Sbjct: 640  TDMVRPQTMNRNQLVENS--DPRRMDNGVACPSTVSGISSVSISGNEQKPVIGTGAITEG 697

Query: 2289 QPF----VGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSSSCXXXX 2125
            +          SLP LLK+IAVNPTML++L+KM +Q+R A + +QKP++  ++S      
Sbjct: 698  EQIQMTGTSEASLPDLLKNIAVNPTMLLNLLKMGQQQRSAIDAQQKPSDPAKTSK----- 752

Query: 2124 XXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQSESGKVRMKPRDPRRI 1945
                             V +  PP    + +  G  Q     +  E GK+RMKPRDPRR+
Sbjct: 753  ----HPLNANAILGSVPVVNVVPPQPSVMPRPAGTLQVPPQAAVEELGKIRMKPRDPRRV 808

Query: 1944 LHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQSTL--PDIAP 1771
            LH   +Q++ N   +QFKT    P   Q  +DN   ++Q  QA T      +L  PDI+ 
Sbjct: 809  LHYQTLQKNGNMGYEQFKTNLTSPPTDQGTKDNQIVQKQDGQAETEPVPLQSLVVPDISL 868

Query: 1770 QFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVATDSNDQQSGTGLAR 1591
             FTK L+NIADI+S S A+ +P  +  N+     P++T          +++Q +G G A 
Sbjct: 869  PFTKSLKNIADIVSVSHASTSPTVVSQNLASQ--PTRT-------IVSNSEQPAGIGSAP 919

Query: 1590 EEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXX 1411
              A    +  + WGDV+HL EGY DQQKAAIQ+ERARRIEEQ KMFAARK          
Sbjct: 920  CVAPVGPRPQDAWGDVEHLFEGYSDQQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHT 979

Query: 1410 XLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLY 1231
             LNSAKF+EVD VHDEILRKKEE DREKP RHLFRF HMGMWTKLRPGIWNFLE ASKLY
Sbjct: 980  LLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIWNFLEKASKLY 1039

Query: 1230 ELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGME 1051
            ELHLYTMGN+ YATEMAKVLDPTG LF GRVISRGDD D FDSDE++PK+KDL+GVLGME
Sbjct: 1040 ELHLYTMGNKLYATEMAKVLDPTGVLFNGRVISRGDDTDSFDSDERVPKSKDLEGVLGME 1099

Query: 1050 SAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASS 871
            SAVVIIDDSVRVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEIDHDERPEDGTLA S
Sbjct: 1100 SAVVIIDDSVRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLACS 1159

Query: 870  LGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQT 691
            L VIE+IHQ FF+H SL++ DVRNILA+EQRKIL+ CRIVFSRVFPVGEANPHLHPLWQT
Sbjct: 1160 LAVIEKIHQHFFTHPSLDDADVRNILASEQRKILAGCRIVFSRVFPVGEANPHLHPLWQT 1219

Query: 690  AQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLYRRANERDF 511
            A+QFGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VV+PGWVEASALLYRRANE+DF
Sbjct: 1220 AEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVYPGWVEASALLYRRANEQDF 1279

Query: 510  AVK 502
            A+K
Sbjct: 1280 AIK 1282


>ref|XP_008222368.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Prunus mume]
          Length = 1194

 Score =  851 bits (2199), Expect = 0.0
 Identities = 494/911 (54%), Positives = 592/911 (64%), Gaps = 18/911 (1%)
 Frame = -2

Query: 3180 LPSPTRENPLILPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEETEDAAL 3001
            LPSPTRE P   P          LV     +K    T    V ++          ED+ L
Sbjct: 327  LPSPTRETPSCFPVQN------TLVVADGMVKSASDTATARVALN---------AEDSRL 371

Query: 3000 HPYVTDALRAVSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARI 2821
            H Y T+AL+AVSSYQQKF R+SFL S RLPSPTP              EVSSS+  N R 
Sbjct: 372  HSYETEALKAVSSYQQKFNRSSFLMSERLPSPTP-SEDGGNGDDDTGGEVSSSSASNLRT 430

Query: 2820 ANSNVVMQPPVS-TTAPLDGLNGQGRGKTVGLLGAGSTP---ILRPIKTRDPRLRIANLN 2653
            + S +  +  VS +  P+   + QGR          S P   I    K+RDPRLR AN +
Sbjct: 431  SCSPMSGRQIVSPSPIPVGSSSMQGRATAKSAAPPNSEPSMTIKASAKSRDPRLRFANSD 490

Query: 2652 VGASDQKDSPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSA 2473
            +GA +    P  V + A K D    +SSRK K ++ES  DG  LK+QRN+  +S +   A
Sbjct: 491  MGALNLNQQPSTVVHSAPKVDSVITLSSRKQKPLEESRFDGPALKRQRNALENSGIVGDA 550

Query: 2472 RVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESK---------CENGEVGSINRNDTN 2320
            +  SGSGGWLED    G   + K Q +E+ E D  K           +G     N  + +
Sbjct: 551  KTASGSGGWLEDIGGVGPHLNSKNQTVENAETDPRKVVKVLSSPSIVDGNTNGPNSANEH 610

Query: 2319 AHLHGANGGGQPFVGPVSLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQKPANTLQSS 2143
              L GA+          SLP+LLKDIAVNPTML++L+KM +Q+RLAAE +QK A+  +++
Sbjct: 611  VSLMGAS--------TASLPALLKDIAVNPTMLLNLLKMGQQQRLAAEAQQKSADPPKTT 662

Query: 2142 SCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTSMNSQ----SESGKV 1975
            +                         SK   +L+      P+ T  ++SQ     ESGKV
Sbjct: 663  T-------HPTSSSSILVSAALGNVPSKTSGILQT-----PAGTLPVSSQKALMDESGKV 710

Query: 1974 RMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVTSLHSQ 1795
            RMKPRDPRR LH N +Q+S +   +QF+ +    S  Q  +DN+   +   + VT+    
Sbjct: 711  RMKPRDPRRALHGNALQKSGSLGHEQFRNIVPPLSSIQGNKDNLNG-QADKKPVTA--QS 767

Query: 1794 STLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVATDSNDQ 1615
               PDI  QFTK L+NIADI+S S  + +P     ++     P K E++D++      + 
Sbjct: 768  LDAPDITRQFTKNLKNIADIMSVSNVSTSPAIASQSVSSQPVPIKPERIDLKPEEQRPES 827

Query: 1614 QSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXX 1435
             S +  A   A+  S+ P  WGDV+HL EGYDDQQKAAIQ+ER RRIEEQ KMFAA K  
Sbjct: 828  ISASEAA---AAGPSRSPVMWGDVEHLFEGYDDQQKAAIQRERTRRIEEQKKMFAAHKLC 884

Query: 1434 XXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNF 1255
                     LNSAKF+EVD VHDEILRKKEE DREKP+RHLFR  HMGMWTKLRPGIWNF
Sbjct: 885  LVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPRRHLFR--HMGMWTKLRPGIWNF 942

Query: 1254 LETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKD 1075
            LE AS+L+ELHLYTMGN+ YATEMAKVLDPTG LFAGRVISRGDDGDP D DE++PK+KD
Sbjct: 943  LEKASQLFELHLYTMGNKLYATEMAKVLDPTGALFAGRVISRGDDGDPEDGDERIPKSKD 1002

Query: 1074 LDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERP 895
            L+GVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGLLGPSLLEIDHDER 
Sbjct: 1003 LEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERQ 1062

Query: 894  EDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANP 715
            EDGTLASSL VIE+IHQ FFSH SL+E DVRNILA+EQRKIL+ CRIVFSRVFPVGE  P
Sbjct: 1063 EDGTLASSLAVIEKIHQLFFSHSSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEVKP 1122

Query: 714  HLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEASALLY 535
            HLHPLWQTA+QFGAVCT QID+QVTHVVANSLGTDKVNWALS+G++VVHPGWVEASALLY
Sbjct: 1123 HLHPLWQTAEQFGAVCTNQIDDQVTHVVANSLGTDKVNWALSSGKYVVHPGWVEASALLY 1182

Query: 534  RRANERDFAVK 502
            RRANE+DFA+K
Sbjct: 1183 RRANEQDFAIK 1193


>ref|XP_011020855.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
            [Populus euphratica]
          Length = 1271

 Score =  843 bits (2178), Expect = 0.0
 Identities = 495/916 (54%), Positives = 589/916 (64%), Gaps = 34/916 (3%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEE-TEDAALHPYVTDALRA 2971
            LPSPTRE  P   V   +PI       GD +  S L   +    TE+  +HPY TDAL+A
Sbjct: 379  LPSPTRETAPSFPVQRLLPI-------GDGMISSGLPVPKVASITEEPRVHPYETDALKA 431

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQ-- 2797
            VSSYQQKF R SF + N LPSPTP               VSSS   N R  N  V  +  
Sbjct: 432  VSSYQQKFNRNSFFT-NELPSPTPSEESGNGDGDIAGE-VSSSLTANYRTVNPPVSERKS 489

Query: 2796 ------PPVSTTAPLDGLNGQ-------GRGKTVGLLGAGSTPILRPIKTRDPRLRIANL 2656
                  PP     P   LN          R       G  ST      K+RDPRLR  N 
Sbjct: 490  ASPSPPPPPPPPPPPPHLNNSCIRVVIPTRDSAPVSSGTSSTA-KASAKSRDPRLRYVNT 548

Query: 2655 NVGASDQKDSPQ-PVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSN 2479
            +V A DQ       V+N       G I  SRK K+ +E VLDG +LK+QRNS  +     
Sbjct: 549  DVSALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDGTSLKRQRNSFDNFGGVR 607

Query: 2478 SARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV----GSINRN-----D 2326
              R  +G+GGWLED ++   Q   K Q  E+ E  + +  NG V    GS+  N     +
Sbjct: 608  DIRSMTGTGGWLEDTDMAEPQTVNKNQRAENAEPGQ-RINNGVVRPSTGSVMSNVNCSGN 666

Query: 2325 TNAHLHGANGGGQPFVGPV------SLPSLLKDIAVNPTMLMHLIKM-EQERLAAEGRQK 2167
                + G N        PV      SLP LLKDI VNPT+L++++KM +Q+RLA +G+QK
Sbjct: 667  VQVPVMGINTVAGSEQAPVTSTTTASLPDLLKDITVNPTLLINILKMGQQQRLALDGQQK 726

Query: 2166 PANTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLLEIEKSHGPSQTTS-MNSQS 1990
             A+  +S+S                        SS+P  +L   +S G +Q  S + +  
Sbjct: 727  LADPAKSTS------HPPSSSSVPGATPEVNAVSSQPSGILP--RSAGKAQVPSQVATTD 778

Query: 1989 ESGKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQAVT 1810
            ESGK+RMKPRDPRR+LHNN +QR+ +  S+QFKT   + S  Q  +DN   ++Q   A  
Sbjct: 779  ESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTTQGTKDNQNLQKQEGLAEL 837

Query: 1809 SLHSQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIRVAT 1630
            +       PDI+  FTK L+NIADI+S SQ   TP  +  N+       K++++D +  T
Sbjct: 838  N---PVVPPDISSSFTKSLQNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGKTGT 894

Query: 1629 DSNDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFA 1450
             ++DQ+ G   + E  + +S   N W DV+HL EGYDDQQKAAIQ+ERARRIEEQ K+FA
Sbjct: 895  SNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFA 954

Query: 1449 ARKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRP 1270
            ARK           LNSAKF+EVD VHDEILRKKEE DREKP RHLFRF HMGMWTKLRP
Sbjct: 955  ARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRP 1014

Query: 1269 GIWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKL 1090
            GIWNFLE ASKLYELHLYTMGN+ YATEMAKVLDP G LFAGRV+SRGDDGD  D DE++
Sbjct: 1015 GIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERV 1074

Query: 1089 PKNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEID 910
            PK+KDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFP SRRQFGL GPSLLEID
Sbjct: 1075 PKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEID 1134

Query: 909  HDERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPV 730
            HD+RPEDGTLA SL VIERIHQ+FF+H SL+E DVRNIL++EQRKIL+ CR+VFSRVFPV
Sbjct: 1135 HDQRPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILSSEQRKILAGCRVVFSRVFPV 1194

Query: 729  GEANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGWVEA 550
            GE NPHLHPLWQTA+QFGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPGWVEA
Sbjct: 1195 GEVNPHLHPLWQTAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEA 1254

Query: 549  SALLYRRANERDFAVK 502
            SALLYRRANE++FA+K
Sbjct: 1255 SALLYRRANEQEFAIK 1270


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343308|gb|EEE79627.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  840 bits (2171), Expect = 0.0
 Identities = 495/920 (53%), Positives = 587/920 (63%), Gaps = 38/920 (4%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEE-TEDAALHPYVTDALRA 2971
            LPSPTRE  P   V   +PI       GD +  S L   +    TE+  +HPY TDAL+A
Sbjct: 352  LPSPTRETAPSFPVQRLLPI-------GDGMISSGLPVPKVASITEEPRVHPYETDALKA 404

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQ-- 2797
            VSSYQ+KF   SF + N LPSPTP               VSSS+  N R  N  V  +  
Sbjct: 405  VSSYQKKFNLNSFFT-NELPSPTPSEESGNGDGDTAGE-VSSSSTVNYRTVNPPVSDRKS 462

Query: 2796 ---------PPVSTTAPLDGLNGQG-------RGKTVGLLGAGSTPILRPIKTRDPRLRI 2665
                     PP     P   LN          R       G  ST +    K+RDPRLR 
Sbjct: 463  ASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSST-VKASAKSRDPRLRY 521

Query: 2664 ANLNVGASDQKDSPQ-PVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSK 2488
             N +  A DQ       V+N       G I  SRK K+ +E VLDG +LK+QRNS  +  
Sbjct: 522  VNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDGTSLKRQRNSFDNFG 580

Query: 2487 LSNSARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV----GSINRN--- 2329
            +    R  +G+GGWLED ++   Q   K Q  E+ E  + +  NG V    GS+  +   
Sbjct: 581  VVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQ-RINNGVVCPSTGSVMSSVSC 639

Query: 2328 --DTNAHLHGANGGGQPFVGPV------SLPSLLKDIAVNPTMLMHLIKM-EQERLAAEG 2176
              +    + G N        PV      SLP LLKDI VNPTML++++KM +Q+RLA +G
Sbjct: 640  SGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALDG 699

Query: 2175 RQKPANTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLL--EIEKSHGPSQTTSM 2002
            +QK A+  +S+S                        SS P  +L     K+ GPSQ  + 
Sbjct: 700  QQKLADPAKSTS------HPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIATT 753

Query: 2001 NSQSESGKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGN 1822
            +   ESGK+RMKPRDPRR+LHNN +QR+ +  S+QFKT   + S  Q  +DN   ++Q  
Sbjct: 754  D---ESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTTQGTKDNQNLQKQEG 809

Query: 1821 QAVTSLHSQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDI 1642
             A          PDI+  FTK L+NIADI+S SQ   TP  +  N+       K++++D 
Sbjct: 810  LAELK---PVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDG 866

Query: 1641 RVATDSNDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQN 1462
            +    ++DQ+ G   + E  + +S   N W DV+HL EGYDDQQKAAIQ+ERARRIEEQ 
Sbjct: 867  KTGISNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQK 926

Query: 1461 KMFAARKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWT 1282
            K+FAARK           LNSAKF+EVD VHDEILRKKEE DREKP RHLFRF HMGMWT
Sbjct: 927  KLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWT 986

Query: 1281 KLRPGIWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDS 1102
            KLRPGIWNFLE ASKLYELHLYTMGN+ YATEMAKVLDP G LFAGRV+SRGDDGD  D 
Sbjct: 987  KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDG 1046

Query: 1101 DEKLPKNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSL 922
            DE++PK+KDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFP SRRQFGL GPSL
Sbjct: 1047 DERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSL 1106

Query: 921  LEIDHDERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSR 742
            LEIDHDERPEDGTLA SL VIERIHQ+FF+H SL+E DVRNILA+EQRKIL+ CRIVFSR
Sbjct: 1107 LEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFSR 1166

Query: 741  VFPVGEANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPG 562
            VFPVGE NPHLHPLWQ+A+QFGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPG
Sbjct: 1167 VFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPG 1226

Query: 561  WVEASALLYRRANERDFAVK 502
            WVEASALLYRRANE+DFA+K
Sbjct: 1227 WVEASALLYRRANEQDFAIK 1246


>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
            gi|550343307|gb|EEE79693.2| hypothetical protein
            POPTR_0003s16280g [Populus trichocarpa]
          Length = 1030

 Score =  840 bits (2171), Expect = 0.0
 Identities = 495/920 (53%), Positives = 587/920 (63%), Gaps = 38/920 (4%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIKKTQTTTGDEVTISHLKHARQEE-TEDAALHPYVTDALRA 2971
            LPSPTRE  P   V   +PI       GD +  S L   +    TE+  +HPY TDAL+A
Sbjct: 135  LPSPTRETAPSFPVQRLLPI-------GDGMISSGLPVPKVASITEEPRVHPYETDALKA 187

Query: 2970 VSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVMQ-- 2797
            VSSYQ+KF   SF + N LPSPTP               VSSS+  N R  N  V  +  
Sbjct: 188  VSSYQKKFNLNSFFT-NELPSPTPSEESGNGDGDTAGE-VSSSSTVNYRTVNPPVSDRKS 245

Query: 2796 ---------PPVSTTAPLDGLNGQG-------RGKTVGLLGAGSTPILRPIKTRDPRLRI 2665
                     PP     P   LN          R       G  ST +    K+RDPRLR 
Sbjct: 246  ASPSPSPPPPPPPPPPPPPHLNNSSIRVVIPTRNSAPVSSGTSST-VKASAKSRDPRLRY 304

Query: 2664 ANLNVGASDQKDSPQ-PVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSK 2488
             N +  A DQ       V+N       G I  SRK K+ +E VLDG +LK+QRNS  +  
Sbjct: 305  VNTDASALDQNQRTLLMVNNPPRAEPSGAIAGSRKQKI-EEDVLDGTSLKRQRNSFDNFG 363

Query: 2487 LSNSARVTSGSGGWLEDGNIPGSQPSRKEQLIESMEVDESKCENGEV----GSINRN--- 2329
            +    R  +G+GGWLED ++   Q   K Q  E+ E  + +  NG V    GS+  +   
Sbjct: 364  VVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQ-RINNGVVCPSTGSVMSSVSC 422

Query: 2328 --DTNAHLHGANGGGQPFVGPV------SLPSLLKDIAVNPTMLMHLIKM-EQERLAAEG 2176
              +    + G N        PV      SLP LLKDI VNPTML++++KM +Q+RLA +G
Sbjct: 423  SGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALDG 482

Query: 2175 RQKPANTLQSSSCXXXXXXXXXXXXXXXXXXXXXVTSSKPPSLL--EIEKSHGPSQTTSM 2002
            +QK A+  +S+S                        SS P  +L     K+ GPSQ  + 
Sbjct: 483  QQKLADPAKSTS------HPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIATT 536

Query: 2001 NSQSESGKVRMKPRDPRRILHNNIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGN 1822
            +   ESGK+RMKPRDPRR+LHNN +QR+ +  S+QFKT   + S  Q  +DN   ++Q  
Sbjct: 537  D---ESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTT-TLTSTTQGTKDNQNLQKQEG 592

Query: 1821 QAVTSLHSQSTLPDIAPQFTKKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDI 1642
             A          PDI+  FTK L+NIADI+S SQ   TP  +  N+       K++++D 
Sbjct: 593  LAELK---PVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDG 649

Query: 1641 RVATDSNDQQSGTGLAREEASTTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQN 1462
            +    ++DQ+ G   + E  + +S   N W DV+HL EGYDDQQKAAIQ+ERARRIEEQ 
Sbjct: 650  KTGISNSDQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQK 709

Query: 1461 KMFAARKXXXXXXXXXXXLNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWT 1282
            K+FAARK           LNSAKF+EVD VHDEILRKKEE DREKP RHLFRF HMGMWT
Sbjct: 710  KLFAARKLCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWT 769

Query: 1281 KLRPGIWNFLETASKLYELHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDS 1102
            KLRPGIWNFLE ASKLYELHLYTMGN+ YATEMAKVLDP G LFAGRV+SRGDDGD  D 
Sbjct: 770  KLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDG 829

Query: 1101 DEKLPKNKDLDGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSL 922
            DE++PK+KDL+GVLGMES VVIIDDS+RVWPHNKLNLIVVERY YFP SRRQFGL GPSL
Sbjct: 830  DERVPKSKDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSL 889

Query: 921  LEIDHDERPEDGTLASSLGVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSR 742
            LEIDHDERPEDGTLA SL VIERIHQ+FF+H SL+E DVRNILA+EQRKIL+ CRIVFSR
Sbjct: 890  LEIDHDERPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFSR 949

Query: 741  VFPVGEANPHLHPLWQTAQQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPG 562
            VFPVGE NPHLHPLWQ+A+QFGAVCT QIDEQVTHVVANSLGTDKVNWALSTGR VVHPG
Sbjct: 950  VFPVGEVNPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPG 1009

Query: 561  WVEASALLYRRANERDFAVK 502
            WVEASALLYRRANE+DFA+K
Sbjct: 1010 WVEASALLYRRANEQDFAIK 1029


>ref|XP_010100046.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
            notabilis] gi|587892642|gb|EXB81217.1| RNA polymerase II
            C-terminal domain phosphatase-like 3 [Morus notabilis]
          Length = 1301

 Score =  838 bits (2164), Expect = 0.0
 Identities = 475/883 (53%), Positives = 577/883 (65%), Gaps = 20/883 (2%)
 Frame = -2

Query: 3147 LPSPTRENPPILLVTPPMPIK----KTQTTTGDEVTISHLKHARQEETEDAALHPYVTDA 2980
            LPSPTRE P    V  P+ +     K  +TT                 E++ LH Y TDA
Sbjct: 410  LPSPTREAPSCFPVYKPLGVADGIIKPVSTTAKVAP----------GAEESRLHRYETDA 459

Query: 2979 LRAVSSYQQKFGRTSFLSSNRLPSPTPXXXXXXXXXXXXXXEVSSSTDGNARIANSNVVM 2800
            L+AVS+YQQKFGR SFL S+RLPSPTP                SS T GN R     ++ 
Sbjct: 460  LKAVSTYQQKFGRGSFLMSDRLPSPTPSEECDEEDDINQEVS-SSLTSGNLRTPAIPILR 518

Query: 2799 QPPVSTTAPLDGLNGQG--RGKTVGLLGAGSTPILRP-IKTRDPRLRIANLNVGASDQKD 2629
               V+++ P+     QG    K    +G+GS   ++   ++RDPRLR AN + GA D   
Sbjct: 519  PSVVTSSVPVSSPTMQGPIAAKNAAPVGSGSNSTMKASARSRDPRLRFANSDAGALDLNQ 578

Query: 2628 SPQPVDNGASKNDLGGIMSSRKHKVVDESVLDGHTLKKQRNSSMDSKLSNSARVTSGSGG 2449
             P    +   K + G   SSRK ++V+E  LDG  LK+QR++ + +K+    +  SG GG
Sbjct: 579  RPLTAVHNGPKVEPGDPTSSRKQRIVEEPNLDGPALKRQRHAFVSAKID--VKTASGVGG 636

Query: 2448 WLEDGNIPGSQPSRKEQLIESMEVDESKCENGEVGSINRNDTNAHLHGANGGGQ--PFVG 2275
            WLED    G Q   K QL+E+ E D  K  +   G I  N       G N G +  P  G
Sbjct: 637  WLEDNGTTGPQIMNKNQLVENAEADPRKSIHLVNGPIMNN-------GPNIGKEQVPVTG 689

Query: 2274 ---PVSLPSLLKDIAVNPTMLMHLIKM--EQERLAAEGRQKPANTLQSSSCXXXXXXXXX 2110
               P +LP++LKDIAVNPT+ M ++    +Q+ LAA+ +QK  ++  ++           
Sbjct: 690  TSTPDALPAILKDIAVNPTIFMDILNKLGQQQLLAADAQQKSDSSKNTTH-------PPG 742

Query: 2109 XXXXXXXXXXXXVTSSKPPSLLEIEKSHGP--SQTTSMNSQSESGKVRMKPRDPRRILHN 1936
                        V  SK   +L+      P  SQ  + + Q E GK+RMKPRDPRR+LH 
Sbjct: 743  TNSILGAAPLVNVAPSKASGILQTPAVSLPTTSQVATASMQDELGKIRMKPRDPRRVLHG 802

Query: 1935 NIVQRSENSVSDQFKTVGVIPSIAQVGEDNIAAREQGNQA-VTSLHSQSTL-PDIAPQFT 1762
            N++Q+S +   +QFK +    S     +DN+    Q  QA    + SQ  + PDIA QFT
Sbjct: 803  NMLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQADKKQVPSQLVVQPDIARQFT 862

Query: 1761 KKLRNIADILSNSQATNTPVTIPPNIVQSMPPSKTEKLDIR-VATDSNDQQSGTGLAREE 1585
            K LRNIAD++S SQA+ +P T+  N+     P K ++ D++ V  +S DQ SGT    E 
Sbjct: 863  KNLRNIADLMSVSQASTSPATVSQNLSSQPLPVKPDRGDVKAVVPNSEDQHSGTNSTPET 922

Query: 1584 A-STTSQRPNPWGDVDHLLEGYDDQQKAAIQKERARRIEEQNKMFAARKXXXXXXXXXXX 1408
              +  S+ PN WGDV+HL EGYDD+QKAAIQ+ERARR+EEQ KMF A K           
Sbjct: 923  TLAVPSRTPNAWGDVEHLFEGYDDEQKAAIQRERARRLEEQKKMFDAHKLCLVLDLDHTL 982

Query: 1407 LNSAKFIEVDKVHDEILRKKEELDREKPQRHLFRFQHMGMWTKLRPGIWNFLETASKLYE 1228
            LNSAKF+EVD VHDEILRKKEE DREKPQRHLFRF HMGMWTKLRPG+WNFLE ASKLYE
Sbjct: 983  LNSAKFVEVDSVHDEILRKKEEQDREKPQRHLFRFPHMGMWTKLRPGVWNFLEKASKLYE 1042

Query: 1227 LHLYTMGNRYYATEMAKVLDPTGTLFAGRVISRGDDGDPFDSDEKLPKNKDLDGVLGMES 1048
            LHLYTMGN+ YATEMAKVLDP GTLF+GRVISRGDDGDPFD DE++PK+KDL+GVLGMES
Sbjct: 1043 LHLYTMGNKLYATEMAKVLDPMGTLFSGRVISRGDDGDPFDGDERVPKSKDLEGVLGMES 1102

Query: 1047 AVVIIDDSVRVWPHNKLNLIVVERYTYFPSSRRQFGLLGPSLLEIDHDERPEDGTLASSL 868
            +VVIIDDSVRVWPHNKLNLIVVERYTYFP SRRQFGL GPSLLEIDHDERPE GTLASSL
Sbjct: 1103 SVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLPGPSLLEIDHDERPEQGTLASSL 1162

Query: 867  GVIERIHQDFFSHRSLNEVDVRNILAAEQRKILSNCRIVFSRVFPVGEANPHLHPLWQTA 688
             VIE+IHQ+FFSH SL+EVDVRNILA+EQRKIL+ CRIVFSRVFPV E NPHLHPLWQTA
Sbjct: 1163 AVIEKIHQNFFSHHSLDEVDVRNILASEQRKILAGCRIVFSRVFPVSEVNPHLHPLWQTA 1222

Query: 687  QQFGAVCTTQIDEQVTHVVANSLGTDKVNWALSTGRHVVHPGW 559
            +QFGAVCTTQID+QVTHVVANS GTDKVNWAL+ G+  VHPGW
Sbjct: 1223 EQFGAVCTTQIDDQVTHVVANSPGTDKVNWALANGKFAVHPGW 1265