BLASTX nr result

ID: Cinnamomum23_contig00001779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00001779
         (445 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008799374.1| PREDICTED: protein LSD1 isoform X2 [Phoenix ...    56   8e-06
emb|CDP12998.1| unnamed protein product [Coffea canephora]             56   8e-06

>ref|XP_008799374.1| PREDICTED: protein LSD1 isoform X2 [Phoenix dactylifera]
           gi|672159234|ref|XP_008799375.1| PREDICTED: protein LSD1
           isoform X2 [Phoenix dactylifera]
           gi|672159236|ref|XP_008799376.1| PREDICTED: protein LSD1
           isoform X2 [Phoenix dactylifera]
          Length = 143

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/32 (84%), Positives = 27/32 (84%)
 Frame = -2

Query: 444 LMYQYGAGSVKCAFCNFVTSVGASASTLQKYN 349
           LMYQYGAGSVKCA CNFVTSVGAS ST  K N
Sbjct: 111 LMYQYGAGSVKCAVCNFVTSVGASPSTEHKPN 142


>emb|CDP12998.1| unnamed protein product [Coffea canephora]
          Length = 145

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 27/33 (81%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
 Frame = -2

Query: 444 LMYQYGAGSVKCAFCNFVTSVGASASTL-QKYN 349
           LMYQYGA SVKCA CNFVTS+GASAST+ QK+N
Sbjct: 112 LMYQYGARSVKCAVCNFVTSIGASASTIEQKFN 144