BLASTX nr result
ID: Cinnamomum23_contig00001538
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00001538
(206 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008793379.1| PREDICTED: probable NOT transcription comple... 62 2e-07
ref|XP_010938109.1| PREDICTED: probable NOT transcription comple... 60 6e-07
ref|XP_010938104.1| PREDICTED: probable NOT transcription comple... 60 6e-07
ref|XP_009416335.1| PREDICTED: probable NOT transcription comple... 60 6e-07
ref|XP_009416331.1| PREDICTED: probable NOT transcription comple... 60 6e-07
ref|XP_010921271.1| PREDICTED: probable NOT transcription comple... 59 1e-06
ref|XP_010921270.1| PREDICTED: probable NOT transcription comple... 59 1e-06
ref|XP_010921269.1| PREDICTED: probable NOT transcription comple... 59 1e-06
ref|XP_008448346.1| PREDICTED: probable NOT transcription comple... 57 5e-06
ref|XP_008448344.1| PREDICTED: probable NOT transcription comple... 57 5e-06
ref|XP_009406858.1| PREDICTED: probable NOT transcription comple... 56 8e-06
ref|XP_009406857.1| PREDICTED: probable NOT transcription comple... 56 8e-06
>ref|XP_008793379.1| PREDICTED: probable NOT transcription complex subunit VIP2 [Phoenix
dactylifera]
Length = 660
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDSTGRPF +SFSAQSATSP FHH
Sbjct: 7 STLNGSTSNLPDSTGRPFTSSFSAQSATSPGFHH 40
>ref|XP_010938109.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Elaeis guineensis]
Length = 659
Score = 60.1 bits (144), Expect = 6e-07
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDS+GRPF +SFSAQSATSP FHH
Sbjct: 7 STLNGSASNLPDSSGRPFTSSFSAQSATSPGFHH 40
>ref|XP_010938104.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis] gi|743843558|ref|XP_010938105.1|
PREDICTED: probable NOT transcription complex subunit
VIP2 isoform X1 [Elaeis guineensis]
gi|743843562|ref|XP_010938106.1| PREDICTED: probable NOT
transcription complex subunit VIP2 isoform X1 [Elaeis
guineensis] gi|743843566|ref|XP_010938107.1| PREDICTED:
probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis] gi|743843570|ref|XP_010938108.1|
PREDICTED: probable NOT transcription complex subunit
VIP2 isoform X1 [Elaeis guineensis]
Length = 663
Score = 60.1 bits (144), Expect = 6e-07
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDS+GRPF +SFSAQSATSP FHH
Sbjct: 7 STLNGSASNLPDSSGRPFTSSFSAQSATSPGFHH 40
>ref|XP_009416335.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Musa acuminata subsp. malaccensis]
Length = 585
Score = 60.1 bits (144), Expect = 6e-07
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
T LNGS+SN+PDSTGRP+ TSFSAQSA++P FHH
Sbjct: 7 TTLNGSASNIPDSTGRPYTTSFSAQSASNPGFHH 40
>ref|XP_009416331.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
gi|695056240|ref|XP_009416333.1| PREDICTED: probable NOT
transcription complex subunit VIP2 isoform X1 [Musa
acuminata subsp. malaccensis]
Length = 657
Score = 60.1 bits (144), Expect = 6e-07
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
T LNGS+SN+PDSTGRP+ TSFSAQSA++P FHH
Sbjct: 7 TTLNGSASNIPDSTGRPYTTSFSAQSASNPGFHH 40
>ref|XP_010921271.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Elaeis guineensis]
Length = 657
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDSTGRPF +SFSAQ+AT+P FHH
Sbjct: 7 STLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHH 40
>ref|XP_010921270.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Elaeis guineensis]
Length = 660
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDSTGRPF +SFSAQ+AT+P FHH
Sbjct: 7 STLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHH 40
>ref|XP_010921269.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Elaeis guineensis]
Length = 661
Score = 59.3 bits (142), Expect = 1e-06
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
+ LNGS+SNLPDSTGRPF +SFSAQ+AT+P FHH
Sbjct: 7 STLNGSTSNLPDSTGRPFTSSFSAQAATTPGFHH 40
>ref|XP_008448346.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X3 [Cucumis melo]
Length = 677
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 124 KRSESRQTNLNGSSSNLPDSTGRPFPTSFSAQS-ATSPVFHH 2
K S S Q++LNGS+SNLPD TGR F TSFS QS A SPVFHH
Sbjct: 56 KISCSLQSSLNGSTSNLPDGTGRSFATSFSGQSGAASPVFHH 97
>ref|XP_008448344.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Cucumis melo]
Length = 715
Score = 57.0 bits (136), Expect = 5e-06
Identities = 30/42 (71%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = -2
Query: 124 KRSESRQTNLNGSSSNLPDSTGRPFPTSFSAQS-ATSPVFHH 2
K S S Q++LNGS+SNLPD TGR F TSFS QS A SPVFHH
Sbjct: 56 KISCSLQSSLNGSTSNLPDGTGRSFATSFSGQSGAASPVFHH 97
>ref|XP_009406858.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X2 [Musa acuminata subsp. malaccensis]
Length = 653
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
T LNGS+SNL DSTGRP+ TSFSAQSATSP FHH
Sbjct: 7 TTLNGSASNLTDSTGRPY-TSFSAQSATSPGFHH 39
>ref|XP_009406857.1| PREDICTED: probable NOT transcription complex subunit VIP2 isoform
X1 [Musa acuminata subsp. malaccensis]
Length = 657
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -2
Query: 103 TNLNGSSSNLPDSTGRPFPTSFSAQSATSPVFHH 2
T LNGS+SNL DSTGRP+ TSFSAQSATSP FHH
Sbjct: 7 TTLNGSASNLTDSTGRPY-TSFSAQSATSPGFHH 39