BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00001200
         (968 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012467461.1| PREDICTED: photosystem II core complex prote...   209   3e-51
ref|XP_010248759.1| PREDICTED: photosystem II core complex prote...   209   3e-51
ref|XP_002285325.1| PREDICTED: photosystem II core complex prote...   208   4e-51
ref|XP_010933748.1| PREDICTED: photosystem II core complex prote...   204   6e-50
ref|XP_007044927.1| Photosystem II core complex proteins psbY [T...   204   6e-50
ref|XP_011042352.1| PREDICTED: photosystem II core complex prote...   202   4e-49
ref|XP_002315645.1| Photosystem II core complex proteins psbY [P...   200   1e-48
ref|XP_010919400.1| PREDICTED: photosystem II core complex prote...   198   4e-48
ref|XP_008796872.1| PREDICTED: photosystem II core complex prote...   198   4e-48
gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]      196   2e-47
gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]      196   2e-47
ref|XP_002312650.1| Photosystem II core complex proteins psbY [P...   194   8e-47
gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides]      194   8e-47
ref|XP_011029596.1| PREDICTED: photosystem II core complex prote...   193   2e-46
ref|XP_010250914.1| PREDICTED: photosystem II core complex prote...   192   4e-46
gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides]      186   3e-44
ref|XP_002515034.1| photosystem II core complex proteins psbY, c...   184   8e-44
emb|CDP13272.1| unnamed protein product [Coffea canephora]            183   2e-43
ref|XP_004142959.2| PREDICTED: photosystem II core complex prote...   179   3e-42
gb|KGN62340.1| hypothetical protein Csa_2G350230 [Cucumis sativus]    179   3e-42

>ref|XP_012467461.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Gossypium raimondii] gi|763748231|gb|KJB15670.1|
           hypothetical protein B456_002G190000 [Gossypium
           raimondii]
          Length = 201

 Score =  209 bits (531), Expect = 3e-51
 Identities = 113/191 (59%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSN-PSSLFAPAIAGAI 565
           LNA+CLSI+S    +P++PT KP SLLS+QNLPKGLT SKP +NSN PSSL   AIAGAI
Sbjct: 11  LNAKCLSISSTKMSSPTKPTPKPFSLLSMQNLPKGLTISKPANNSNLPSSLAGSAIAGAI 70

Query: 564 FTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKX 385
           F++LSSCD A A QQIAEIAEGDNRG            WVL+NILQPALNQL+RMR  K 
Sbjct: 71  FSTLSSCDPALAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSSKG 130

Query: 384 XXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQP 205
                         FM+TP               SDNRG+LLLFV+APA++WV YNILQP
Sbjct: 131 VIIGLGLGGLAASGFMSTPEASASEIAMVADAASSDNRGTLLLFVVAPALLWVAYNILQP 190

Query: 204 ALNQINRMRSE 172
           ALNQ+NRMRS+
Sbjct: 191 ALNQLNRMRSQ 201



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  I PAI WVL+NILQPALNQ+NRMRS    ++G  L
Sbjct: 93  DNRGLALLLPIIPAIAWVLFNILQPALNQLNRMRSSKGVIIGLGL 137


>ref|XP_010248759.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Nelumbo nucifera]
          Length = 201

 Score =  209 bits (531), Expect = 3e-51
 Identities = 111/191 (58%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSN-PSSLFAPAIAGAI 565
           LNA+CLS+ SPN++NPS+P++KP+SLLSLQNLPKGLTT K +D+ N  SSL   AIAGAI
Sbjct: 11  LNAKCLSLKSPNNLNPSKPSVKPLSLLSLQNLPKGLTTFKSSDSLNLSSSLAGTAIAGAI 70

Query: 564 FTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKX 385
           F++LSSCD+A A QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  K 
Sbjct: 71  FSTLSSCDAALAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQINRMRSSKG 130

Query: 384 XXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQP 205
                         F++ P               SDNRG+L+L V+APAI+WVLYNILQP
Sbjct: 131 ILVGLGVGGLAASRFVSPPSASASEIAMIADASSSDNRGTLVLIVVAPAILWVLYNILQP 190

Query: 204 ALNQINRMRSE 172
           ALNQINRMRS+
Sbjct: 191 ALNQINRMRSQ 201



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMG 154
           DNRG  LL  I PAI WVL+NILQPALNQINRMRS    L+G
Sbjct: 93  DNRGLALLLPIIPAIAWVLFNILQPALNQINRMRSSKGILVG 134


>ref|XP_002285325.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Vitis vinifera]
          Length = 201

 Score =  208 bits (530), Expect = 4e-51
 Identities = 114/191 (59%), Positives = 130/191 (68%), Gaps = 1/191 (0%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPS-SLFAPAIAGAI 565
           LNA+CLSINSP ++N S+PT KPISLLS+QNLPKGLTT K ++N N S SL   AIAGAI
Sbjct: 11  LNAKCLSINSPKNLNLSKPTAKPISLLSIQNLPKGLTTLKSSENQNLSTSLAGTAIAGAI 70

Query: 564 FTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKX 385
           F++LSSCD A A QQIAEIA+GDNRG            WVL+NILQPALNQL++MR  K 
Sbjct: 71  FSTLSSCDPALAAQQIAEIADGDNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRSTKG 130

Query: 384 XXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQP 205
                         FM TP               SDNRG LLLFV+ PAI+WVLYNILQP
Sbjct: 131 VIIGLGLGGLAASGFMLTPHASASEIATLADAASSDNRGQLLLFVVTPAILWVLYNILQP 190

Query: 204 ALNQINRMRSE 172
           ALNQ+NRMRSE
Sbjct: 191 ALNQLNRMRSE 201



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  I PAI WVL+NILQPALNQ+N+MRS    ++G  L
Sbjct: 93  DNRGLALLLPIIPAIAWVLFNILQPALNQLNKMRSTKGVIIGLGL 137


>ref|XP_010933748.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Elaeis guineensis]
          Length = 203

 Score =  204 bits (520), Expect = 6e-50
 Identities = 120/193 (62%), Positives = 134/193 (69%), Gaps = 4/193 (2%)
 Frame = -3

Query: 741 LNARCLSINSP-NHVNPSRPTI-KPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGA 568
           L+A+CLSINSP NH+NP++PT+ KPISLLSLQ LPKGLTT KP     PSS  A AIAGA
Sbjct: 10  LHAKCLSINSPSNHLNPAKPTVRKPISLLSLQTLPKGLTTCKPITTPGPSSFTATAIAGA 69

Query: 567 IFTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           IF++LSS D+AFA QQIA+IAEGDNRG           LWVLYNILQPALNQL+RMR EK
Sbjct: 70  IFSTLSSSDAAFAAQQIADIAEGDNRGLALLIPIIPAILWVLYNILQPALNQLNRMRSEK 129

Query: 387 -XXXXXXXXXXXXXXSFMATP-XXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNI 214
                           FMATP                SD+RG LLLFV+APAI+WVLYNI
Sbjct: 130 GVIVGLGLGGGLAAGGFMATPSASASEVMMIADASSSSDSRGLLLLFVVAPAILWVLYNI 189

Query: 213 LQPALNQINRMRS 175
           LQPALNQINRMRS
Sbjct: 190 LQPALNQINRMRS 202



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 31/45 (68%), Positives = 35/45 (77%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  I PAI+WVLYNILQPALNQ+NRMRSE   ++G  L
Sbjct: 93  DNRGLALLIPIIPAILWVLYNILQPALNQLNRMRSEKGVIVGLGL 137


>ref|XP_007044927.1| Photosystem II core complex proteins psbY [Theobroma cacao]
           gi|508708862|gb|EOY00759.1| Photosystem II core complex
           proteins psbY [Theobroma cacao]
          Length = 201

 Score =  204 bits (520), Expect = 6e-50
 Identities = 110/191 (57%), Positives = 131/191 (68%), Gaps = 1/191 (0%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSN-PSSLFAPAIAGAI 565
           LNA+CLSI+S   +NP++P+ KPISLLS+QNLPKGLT SKP + S  PSSL   AIAGA+
Sbjct: 11  LNAKCLSISSNKTINPTKPSAKPISLLSMQNLPKGLTISKPAEKSILPSSLAGTAIAGAV 70

Query: 564 FTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKX 385
           F++LSSC+ AFA QQIAEIAEGDNRG            WVL+NIL+PALNQLDRMR  K 
Sbjct: 71  FSTLSSCNPAFAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILRPALNQLDRMRSTKG 130

Query: 384 XXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQP 205
                         FM+T                SDNRG+LLLFV+APA++WV YNILQP
Sbjct: 131 VIIGLGLGGLAASGFMSTSDASASEIAMIADAASSDNRGTLLLFVVAPALLWVAYNILQP 190

Query: 204 ALNQINRMRSE 172
           ALNQ+NRMRS+
Sbjct: 191 ALNQLNRMRSQ 201


>ref|XP_011042352.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Populus euphratica]
          Length = 196

 Score =  202 bits (513), Expect = 4e-49
 Identities = 110/190 (57%), Positives = 131/190 (68%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSINS  ++NP++P+ KP+SLLS+QNLPKGLT SKP DN+    L   AIAGAIF
Sbjct: 11  LNAKCLSINSNKNINPTKPSTKPVSLLSMQNLPKGLTISKPADNT---VLTGTAIAGAIF 67

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  K  
Sbjct: 68  TTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGV 127

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        F++TP               SDNRG+LLL V+APAI+WVLYNILQPA
Sbjct: 128 IVGLGLGGLAASGFISTP-DASASEIAMIADATSDNRGTLLLIVVAPAILWVLYNILQPA 186

Query: 201 LNQINRMRSE 172
           LNQIN+MRS+
Sbjct: 187 LNQINKMRSQ 196



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PAI WVL+NILQPALNQINRMR     ++G  L
Sbjct: 89  DNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGL 133


>ref|XP_002315645.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
           gi|118489255|gb|ABK96433.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|222864685|gb|EEF01816.1|
           Photosystem II core complex proteins psbY [Populus
           trichocarpa]
          Length = 196

 Score =  200 bits (508), Expect = 1e-48
 Identities = 109/190 (57%), Positives = 131/190 (68%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSINS  +++P++P+ KP+SLLS+QNLPKGLT SKP DN+    L   AIAGAIF
Sbjct: 11  LNAKCLSINSNKNISPTKPSTKPVSLLSMQNLPKGLTISKPADNT---VLTGTAIAGAIF 67

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  K  
Sbjct: 68  TTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTKGV 127

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        F++TP               SDNRG+LLL V+APAI+WVLYNILQPA
Sbjct: 128 IVGLGLGGLAASGFISTP-HASASEIAMIADATSDNRGTLLLIVVAPAILWVLYNILQPA 186

Query: 201 LNQINRMRSE 172
           LNQIN+MRS+
Sbjct: 187 LNQINKMRSQ 196



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PAI WVL+NILQPALNQINRMR     ++G  L
Sbjct: 89  DNRGLALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGL 133


>ref|XP_010919400.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like, partial [Elaeis guineensis]
          Length = 229

 Score =  198 bits (504), Expect = 4e-48
 Identities = 115/203 (56%), Positives = 137/203 (67%), Gaps = 4/203 (1%)
 Frame = -3

Query: 741 LNARCLSINSP-NHVNPSRPTI-KPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGA 568
           L+A+CLSINSP NH NPS+PT+ KPISL+SLQNLPKGL++SKP     PSS  A AIAGA
Sbjct: 10  LHAKCLSINSPPNHFNPSKPTLTKPISLISLQNLPKGLSSSKPPTTPGPSSFTATAIAGA 69

Query: 567 IFTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           +F++LSS D+AFA QQIA+IAEGDNRG           LWVLYNI QPALNQL RMR E+
Sbjct: 70  LFSTLSSSDAAFAAQQIADIAEGDNRGLALLIPIIPAILWVLYNIFQPALNQLSRMRSER 129

Query: 387 -XXXXXXXXXXXXXXSFMATP-XXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNI 214
                            ++TP                SD+RG L+LFV+APAI+WVLYNI
Sbjct: 130 GVILGLGLGGGLAAAGLVSTPGASAGEVMMIADVSSSSDSRGLLVLFVVAPAILWVLYNI 189

Query: 213 LQPALNQINRMRSE*NALMGRDL 145
           LQPALNQ+NRMRSE   ++G  L
Sbjct: 190 LQPALNQLNRMRSEKGVIVGLGL 212


>ref|XP_008796872.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Phoenix dactylifera]
          Length = 203

 Score =  198 bits (504), Expect = 4e-48
 Identities = 116/193 (60%), Positives = 131/193 (67%), Gaps = 4/193 (2%)
 Frame = -3

Query: 741 LNARCLSINSP-NHVNPSRPTI-KPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGA 568
           L+A+CLSINSP NH+NPS+P + KPISLLSL  LPKGL T KP     PSSL A AIAGA
Sbjct: 10  LHAKCLSINSPSNHLNPSKPAMRKPISLLSLPTLPKGLPTCKPATTPGPSSLTAAAIAGA 69

Query: 567 IFTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           IF+++SS D+AFA QQIA+IAEGDNRG            WVLYNILQPALNQL+RMR EK
Sbjct: 70  IFSTMSSSDAAFAAQQIADIAEGDNRGLAILIPIIPAVAWVLYNILQPALNQLNRMRSEK 129

Query: 387 -XXXXXXXXXXXXXXSFMATP-XXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNI 214
                           FM+TP                SD+RG LLLFV+APAI+WVLYNI
Sbjct: 130 GVVVGLGLGGGLAAAGFMSTPSASAGEVMMIADASSSSDSRGLLLLFVVAPAILWVLYNI 189

Query: 213 LQPALNQINRMRS 175
           LQPALNQINRMRS
Sbjct: 190 LQPALNQINRMRS 202



 Score = 62.0 bits (149), Expect = 6e-07
 Identities = 29/45 (64%), Positives = 34/45 (75%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  +L  I PA+ WVLYNILQPALNQ+NRMRSE   ++G  L
Sbjct: 93  DNRGLAILIPIIPAVAWVLYNILQPALNQLNRMRSEKGVVVGLGL 137


>gb|ABK96551.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  196 bits (498), Expect = 2e-47
 Identities = 108/190 (56%), Positives = 129/190 (67%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSINS  +++P +P+ KP+SLLS+ NLPKGLT SKP DN+    L   AIAGAIF
Sbjct: 11  LNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADNT---VLTGTAIAGAIF 67

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  K  
Sbjct: 68  TTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGV 127

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        F++TP               SDNRG+LLL V+APAI+WVLYNILQPA
Sbjct: 128 IVGLGLGGLAASGFISTP-DASASEIAMIAEATSDNRGTLLLIVVAPAILWVLYNILQPA 186

Query: 201 LNQINRMRSE 172
           LNQIN+MRS+
Sbjct: 187 LNQINKMRSQ 196



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PAI WVL+NILQPALNQINRMR     ++G  L
Sbjct: 89  DNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGL 133


>gb|ABK96304.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 196

 Score =  196 bits (498), Expect = 2e-47
 Identities = 108/190 (56%), Positives = 129/190 (67%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSINS  +++P +P+ KP+SLLS+ NLPKGLT SKP DN+    L   AIAGAIF
Sbjct: 11  LNAKCLSINSIKNISPPKPSTKPVSLLSMLNLPKGLTISKPADNT---VLTGTAIAGAIF 67

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  K  
Sbjct: 68  TTLSSCEPAFAAQQIAEIAEGDNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGV 127

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        F++TP               SDNRG+LLL V+APAI+WVLYNILQPA
Sbjct: 128 IVGLGLGGLAASGFISTP-DASASEIAMIAEAASDNRGTLLLIVVAPAILWVLYNILQPA 186

Query: 201 LNQINRMRSE 172
           LNQIN+MRS+
Sbjct: 187 LNQINKMRSQ 196



 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 28/45 (62%), Positives = 32/45 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PAI WVL+NILQPALNQINRMR     ++G  L
Sbjct: 89  DNRGIALLLPLIPAIAWVLFNILQPALNQINRMRQTKGVIVGLGL 133


>ref|XP_002312650.1| Photosystem II core complex proteins psbY [Populus trichocarpa]
           gi|222852470|gb|EEE90017.1| Photosystem II core complex
           proteins psbY [Populus trichocarpa]
          Length = 192

 Score =  194 bits (493), Expect = 8e-47
 Identities = 108/189 (57%), Positives = 127/189 (67%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSIN+  + NP +P  KPI LL++QNLPKGLT SKP DN+   +L   AIAGAIF
Sbjct: 8   LNAKCLSINANKNTNPIKPPTKPIYLLAMQNLPKGLTISKPADNT---ALAGTAIAGAIF 64

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  +  
Sbjct: 65  TTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRMRETRGV 124

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        FM+TP               SD+RG+LLL V+APAI+WVLYNILQPA
Sbjct: 125 IIGLGLGGLAASGFMSTP-DASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYNILQPA 183

Query: 201 LNQINRMRS 175
           LNQINRMRS
Sbjct: 184 LNQINRMRS 192


>gb|ABK96593.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 192

 Score =  194 bits (493), Expect = 8e-47
 Identities = 108/189 (57%), Positives = 127/189 (67%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSIN+  + NP +P  KPI LL++QNLPKGLT SKP DN+   +L   AIAGAIF
Sbjct: 8   LNAKCLSINANKNTNPIKPPTKPIYLLAMQNLPKGLTISKPADNT---ALAGTAIAGAIF 64

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSSC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  +  
Sbjct: 65  TTLSSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRMRETRGV 124

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        FM+TP               SD+RG+LLL V+APAI+WVLYNILQPA
Sbjct: 125 IIGLGLGGLAASGFMSTP-DASASEIARIAEATSDSRGTLLLLVVAPAILWVLYNILQPA 183

Query: 201 LNQINRMRS 175
           LNQINRMRS
Sbjct: 184 LNQINRMRS 192


>ref|XP_011029596.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Populus euphratica]
          Length = 192

 Score =  193 bits (490), Expect = 2e-46
 Identities = 107/189 (56%), Positives = 127/189 (67%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSIN+  + NP +P  KPI LL++QNLPKGLT SKP DN+   +L   AIAGAIF
Sbjct: 8   LNAKCLSINANKNTNPIKPPTKPIYLLAMQNLPKGLTISKPADNT---ALAGTAIAGAIF 64

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+L+SC+ AFA QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  +  
Sbjct: 65  TALTSCEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPALNQVNRMRETRGV 124

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        FM+TP               SD+RG+LLL V+APAI+WVLYNILQPA
Sbjct: 125 IVGLGLGGLAASGFMSTP-DASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYNILQPA 183

Query: 201 LNQINRMRS 175
           LNQINRMRS
Sbjct: 184 LNQINRMRS 192


>ref|XP_010250914.1| PREDICTED: photosystem II core complex proteins psbY,
           chloroplastic-like [Nelumbo nucifera]
          Length = 201

 Score =  192 bits (487), Expect = 4e-46
 Identities = 113/194 (58%), Positives = 131/194 (67%), Gaps = 4/194 (2%)
 Frame = -3

Query: 741 LNARCLSINS--PNHVNPS-RPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAG 571
           LNA+C SI S  PN++N S +P++KPISLLSLQNLPKGL TSK +D SN   L   AIAG
Sbjct: 11  LNAKCFSIKSASPNNLNASNKPSVKPISLLSLQNLPKGLITSKSSDGSN---LAGTAIAG 67

Query: 570 AIFTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIE 391
           AIF++LSSCD A A QQIAEIAEGDNRG            WVL+NILQPALNQ++RMR  
Sbjct: 68  AIFSTLSSCDPALAAQQIAEIAEGDNRGLALLLPIIPAIAWVLFNILQPALNQINRMRSS 127

Query: 390 K-XXXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNI 214
           K               SFM+TP               SD+RG+LLL V+APAI+WVLYNI
Sbjct: 128 KGIIVGLGLGGLVASSSFMSTPSASASEIAMIADASTSDSRGTLLLVVVAPAILWVLYNI 187

Query: 213 LQPALNQINRMRSE 172
           LQPALNQINRMRS+
Sbjct: 188 LQPALNQINRMRSQ 201



 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 31/49 (63%), Positives = 35/49 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDLNVVV 133
           DNRG  LL  I PAI WVL+NILQPALNQINRMRS    ++G  L  +V
Sbjct: 92  DNRGLALLLPIIPAIAWVLFNILQPALNQINRMRSSKGIIVGLGLGGLV 140


>gb|ABK96594.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 192

 Score =  186 bits (471), Expect = 3e-44
 Identities = 105/189 (55%), Positives = 124/189 (65%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAIF 562
           LNA+CLSIN+  + NP +P  KPI LL++QNL KGLT SKP DN+   +L   AIAGAIF
Sbjct: 8   LNAKCLSINANKNTNPIKPPTKPIYLLAMQNLTKGLTISKPADNT---ALAGTAIAGAIF 64

Query: 561 TSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKXX 382
           T+LSS + AFA QQIAEIAEGDNRG            WVL+NILQP LNQ++RMR  +  
Sbjct: 65  TALSSSEPAFAAQQIAEIAEGDNRGLALLLPLIPAIAWVLFNILQPTLNQVNRMRETRGV 124

Query: 381 XXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQPA 202
                        FM+TP               SD+RG+LLL V+APAI+WVLYNILQPA
Sbjct: 125 IIGLGLGGLAASGFMSTP-DASASEIAMIAEATSDSRGTLLLLVVAPAILWVLYNILQPA 183

Query: 201 LNQINRMRS 175
           LNQINRMRS
Sbjct: 184 LNQINRMRS 192


>ref|XP_002515034.1| photosystem II core complex proteins psbY, chloroplast precursor
           [Ricinus communis] gi|223546085|gb|EEF47588.1|
           photosystem II core complex proteins psbY, chloroplast
           precursor [Ricinus communis]
          Length = 195

 Score =  184 bits (467), Expect = 8e-44
 Identities = 110/192 (57%), Positives = 124/192 (64%), Gaps = 2/192 (1%)
 Frame = -3

Query: 741 LNARCLS-INSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSSLFAPAIAGAI 565
           LN +CLS INS  ++N    T KPISLLS+Q LPKGLT SKPT+ +    L   AIAGAI
Sbjct: 7   LNTKCLSNINSGKNINKPTTT-KPISLLSMQELPKGLTISKPTNENK--LLAGTAIAGAI 63

Query: 564 FTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEKX 385
           F++LSSCD AFA QQIAEIAEGDNRG            WVL+NIL+PALNQ++RMR  K 
Sbjct: 64  FSTLSSCDPAFAAQQIAEIAEGDNRGLALLLPIIPALGWVLFNILRPALNQINRMRETKG 123

Query: 384 XXXXXXXXXXXXXSFM-ATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQ 208
                         FM A P               SDNRG LLLFV+APAI+WVLYNILQ
Sbjct: 124 VIIGLGLGGLAATGFMAAAPEASASENIAMIADAASDNRGQLLLFVVAPAILWVLYNILQ 183

Query: 207 PALNQINRMRSE 172
           PALNQINRMRSE
Sbjct: 184 PALNQINRMRSE 195


>emb|CDP13272.1| unnamed protein product [Coffea canephora]
          Length = 196

 Score =  183 bits (464), Expect = 2e-43
 Identities = 104/191 (54%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTS--KPTDNSNPSSLFAPAIAGA 568
           LNA CLS N+   +N  +P  KP+SLLS+QNLPKGL T+  K  D+   + L   A+AGA
Sbjct: 8   LNANCLSPNTHRVINTLKP--KPVSLLSMQNLPKGLLTTSRKAQDSILSNPLTGTALAGA 65

Query: 567 IFTSLSSCDSAFAVQQIAEIAEGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           IF++LSSCD+AFA QQIAEIAEGDNRG            WVLYNILQPALNQ ++MR  K
Sbjct: 66  IFSTLSSCDAAFAAQQIAEIAEGDNRGLALLLPILPAIAWVLYNILQPALNQFNQMRSSK 125

Query: 387 XXXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQ 208
                          F+ TP                DNRG LLLFVIAPAI+WVLYNILQ
Sbjct: 126 GVIIGLGLGGLAASGFIHTPQASAASEIAAIAEATGDNRGQLLLFVIAPAIIWVLYNILQ 185

Query: 207 PALNQINRMRS 175
           PALNQI+RMRS
Sbjct: 186 PALNQIDRMRS 196



 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 29/45 (64%), Positives = 32/45 (71%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  I PAI WVLYNILQPALNQ N+MRS    ++G  L
Sbjct: 89  DNRGLALLLPILPAIAWVLYNILQPALNQFNQMRSSKGVIIGLGL 133


>ref|XP_004142959.2| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
           [Cucumis sativus]
          Length = 202

 Score =  179 bits (453), Expect = 3e-42
 Identities = 104/192 (54%), Positives = 121/192 (63%), Gaps = 2/192 (1%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSS-LFAPAIAGAI 565
           L+ +C SINS    N  +   KPISLLSLQNLPKGL +SK   NSN S+ L + AIAGA+
Sbjct: 11  LSVKCTSINSTKTHNTQKIIPKPISLLSLQNLPKGLISSKSNQNSNLSTFLSSTAIAGAV 70

Query: 564 FTSLSSCDSAFAVQQIAEIA-EGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           F +L S D AFA QQIAEIA +GDNRG            WVL+NILQPALNQ++RMR +K
Sbjct: 71  FATLGSSDPAFAAQQIAEIAADGDNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDK 130

Query: 387 XXXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQ 208
                          FM  P               SD+RG LLLFV+APAI+WVLYNILQ
Sbjct: 131 GVIIGLGLGGLTASGFMYAPDASASEIAMIADASSSDSRGQLLLFVVAPAILWVLYNILQ 190

Query: 207 PALNQINRMRSE 172
           PALNQ+NRMRSE
Sbjct: 191 PALNQLNRMRSE 202



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PA+ WVL+NILQPALNQINRMRS+   ++G  L
Sbjct: 94  DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVIIGLGL 138


>gb|KGN62340.1| hypothetical protein Csa_2G350230 [Cucumis sativus]
          Length = 253

 Score =  179 bits (453), Expect = 3e-42
 Identities = 104/192 (54%), Positives = 121/192 (63%), Gaps = 2/192 (1%)
 Frame = -3

Query: 741 LNARCLSINSPNHVNPSRPTIKPISLLSLQNLPKGLTTSKPTDNSNPSS-LFAPAIAGAI 565
           L+ +C SINS    N  +   KPISLLSLQNLPKGL +SK   NSN S+ L + AIAGA+
Sbjct: 62  LSVKCTSINSTKTHNTQKIIPKPISLLSLQNLPKGLISSKSNQNSNLSTFLSSTAIAGAV 121

Query: 564 FTSLSSCDSAFAVQQIAEIA-EGDNRGXXXXXXXXXXXLWVLYNILQPALNQLDRMRIEK 388
           F +L S D AFA QQIAEIA +GDNRG            WVL+NILQPALNQ++RMR +K
Sbjct: 122 FATLGSSDPAFAAQQIAEIAADGDNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDK 181

Query: 387 XXXXXXXXXXXXXXSFMATPXXXXXXXXXXXXXXXSDNRGSLLLFVIAPAIVWVLYNILQ 208
                          FM  P               SD+RG LLLFV+APAI+WVLYNILQ
Sbjct: 182 GVIIGLGLGGLTASGFMYAPDASASEIAMIADASSSDSRGQLLLFVVAPAILWVLYNILQ 241

Query: 207 PALNQINRMRSE 172
           PALNQ+NRMRSE
Sbjct: 242 PALNQLNRMRSE 253



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -3

Query: 279 DNRGSLLLFVIAPAIVWVLYNILQPALNQINRMRSE*NALMGRDL 145
           DNRG  LL  + PA+ WVL+NILQPALNQINRMRS+   ++G  L
Sbjct: 145 DNRGLALLLPLIPAVAWVLFNILQPALNQINRMRSDKGVIIGLGL 189