BLASTX nr result
ID: Cinnamomum23_contig00000838
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum23_contig00000838
(2977 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts... 668 0.0
ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts... 659 0.0
ref|XP_010246763.1| PREDICTED: regulator of nonsense transcripts... 594 e-166
ref|XP_008802925.1| PREDICTED: regulator of nonsense transcripts... 592 e-166
ref|XP_008802922.1| PREDICTED: regulator of nonsense transcripts... 587 e-164
ref|XP_008802926.1| PREDICTED: regulator of nonsense transcripts... 586 e-164
ref|XP_006858584.1| PREDICTED: regulator of nonsense transcripts... 585 e-164
ref|XP_011628613.1| PREDICTED: regulator of nonsense transcripts... 583 e-163
ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts... 570 e-159
ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts... 569 e-159
ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts... 562 e-157
ref|XP_010910195.1| PREDICTED: regulator of nonsense transcripts... 550 e-153
ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts... 539 e-150
ref|XP_008795266.1| PREDICTED: regulator of nonsense transcripts... 539 e-150
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts... 537 e-149
ref|XP_008795263.1| PREDICTED: regulator of nonsense transcripts... 535 e-148
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts... 533 e-148
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts... 533 e-148
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr... 530 e-147
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts... 529 e-147
>ref|XP_010246760.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Nelumbo
nucifera]
Length = 612
Score = 668 bits (1724), Expect = 0.0
Identities = 380/619 (61%), Positives = 445/619 (71%), Gaps = 21/619 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP +SQSAL EQID RFA RY+W CFR+G NSQK+QR++RAYIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GH+FVNEKG+QFKTIVEYAPSQR K WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FLD ++KPVENLPSAE+QLER+EA ERAG KE IVTPLMDFVRQKRAAK GSQR +N
Sbjct: 121 FLDLISKPVENLPSAEVQLERREA-ERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G SPG+S S+STKR SEKRR TSMYVLRDS KNTSGK+ STY+L+ RR+DQ
Sbjct: 180 GKLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQ 239
Query: 951 QLSEKSVA--VGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
+L++KSV+ + + TE EDE VP D +T A V
Sbjct: 240 ELTDKSVSLVIASGTETAEDEKVPKTDGAISTATGSADTGKKKVLLLKGKEREIPNAPEV 299
Query: 1125 -VSPQQSI--TVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQ 1295
VS QQS+ +RNS S AFKQ+QR RDVSGR+IRSILS K+AR QS+ A +QS+QQ
Sbjct: 300 GVSQQQSVISPIRNSPNSTAFKQSQR--RDVSGRMIRSILS-KEARQGQSTTA-IQSDQQ 355
Query: 1296 MQTVNLEKDKRPPRPNNIRSILKDH---VSPHAVISDGDTKRASDDKFVANDLHNVTSVN 1466
QT+NLEK+KRPPRP +RS+LKDH +S A D + KR DDK ND+H V+SVN
Sbjct: 356 SQTMNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVN 415
Query: 1467 EKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSS-SLHAQFLSDSFEGMTISQQAAA 1643
EKQ++R RNKDRPDRGVWTPLRRSD SHASD SS S Q LSDS EGMTI+Q A
Sbjct: 416 EKQEKRARNKDRPDRGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAP 475
Query: 1644 GVSKTGDDVVEDTDSGNNS-FTGGKPRSMDXXXXXXXXXXXXXXXANEFTLC--EMKADM 1814
G K GDDV+++ +SGN S F GK RS + ++ + C E+K+++
Sbjct: 476 GAGKLGDDVLDEPESGNKSFFPSGKARSQE-ASVHNSRVGRGGNVSSAYDSCSHEVKSEI 534
Query: 1815 PNASKSGEIKVIGTG------LVNGSHRHVVRRGP-HGLKEIDG-SPNFSEGKPSKRG-G 1967
+ASK GE+K IG+G NGSHR RRG HG K+IDG S + S+GKPSKRG
Sbjct: 535 HHASK-GEVKTIGSGRSNFSSAENGSHRQFSRRGSVHGGKDIDGNSLSTSDGKPSKRGNA 593
Query: 1968 TGYGSHEKQVWVQKSGSGS 2024
TGYGSHEKQVWVQK GSGS
Sbjct: 594 TGYGSHEKQVWVQKLGSGS 612
>ref|XP_010246761.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Nelumbo
nucifera]
Length = 602
Score = 659 bits (1701), Expect = 0.0
Identities = 379/619 (61%), Positives = 446/619 (72%), Gaps = 21/619 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP +SQSAL EQID RFA RY+W CFR+G NSQK+QR++RAYIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GH+FVNEKG+QFKTIVEYAPSQR K WSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEKGSQFKTIVEYAPSQRVAKSWSKKDGREGTIFKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FLD ++KPVENLPSAE+QLER+EA ERAG KE IVTPLMDFVRQKRAAK GSQR +N
Sbjct: 121 FLDLISKPVENLPSAEVQLERREA-ERAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G SPG+S S+STKR SEKRR TSMYVLRDS KNTSGK+ STY+L+ RR+DQ
Sbjct: 180 GKLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQ 239
Query: 951 QLSEKSVA--VGAATEILEDE-AVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSG 1121
+L++KSV+ + + TE EDE A +AD TG + +
Sbjct: 240 ELTDKSVSLVIASGTETAEDEKATGSAD----TGKKKVLLLKGKEREIPNAPEVG----- 290
Query: 1122 VVSPQQSI--TVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQ 1295
VS QQS+ +RNS S AFKQ+QR RDVSGR+IRSILS K+AR QS+ A +QS+QQ
Sbjct: 291 -VSQQQSVISPIRNSPNSTAFKQSQR--RDVSGRMIRSILS-KEARQGQSTTA-IQSDQQ 345
Query: 1296 MQTVNLEKDKRPPRPNNIRSILKDH---VSPHAVISDGDTKRASDDKFVANDLHNVTSVN 1466
QT+NLEK+KRPPRP +RS+LKDH +S A D + KR DDK ND+H V+SVN
Sbjct: 346 SQTMNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVN 405
Query: 1467 EKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSS-SLHAQFLSDSFEGMTISQQAAA 1643
EKQ++R RNKDRPDRGVWTPLRRSD SHASD SS S Q LSDS EGMTI+Q A
Sbjct: 406 EKQEKRARNKDRPDRGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAP 465
Query: 1644 GVSKTGDDVVEDTDSGNNS-FTGGKPRSMDXXXXXXXXXXXXXXXANEFTLC--EMKADM 1814
G K GDDV+++ +SGN S F GK RS + ++ + C E+K+++
Sbjct: 466 GAGKLGDDVLDEPESGNKSFFPSGKARSQE-ASVHNSRVGRGGNVSSAYDSCSHEVKSEI 524
Query: 1815 PNASKSGEIKVIGTG------LVNGSHRHVVRRGP-HGLKEIDG-SPNFSEGKPSKRG-G 1967
+ASK GE+K IG+G NGSHR RRG HG K+IDG S + S+GKPSKRG
Sbjct: 525 HHASK-GEVKTIGSGRSNFSSAENGSHRQFSRRGSVHGGKDIDGNSLSTSDGKPSKRGNA 583
Query: 1968 TGYGSHEKQVWVQKSGSGS 2024
TGYGSHEKQVWVQK GSGS
Sbjct: 584 TGYGSHEKQVWVQKLGSGS 602
>ref|XP_010246763.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X4 [Nelumbo
nucifera]
Length = 580
Score = 594 bits (1532), Expect = e-166
Identities = 352/619 (56%), Positives = 416/619 (67%), Gaps = 21/619 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP +SQSAL EQID RFA RY+W CFR+G NSQK+QR++RAYIDF
Sbjct: 1 MKDPFDRTKVVLRHLPPTLSQSALTEQIDGRFAGRYKWICFRSGKNSQKHQRYSRAYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GH+FVNEK DPEYLE
Sbjct: 61 KRPEDVIEFAEFFDGHIFVNEK--------------------------------DPEYLE 88
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FLD ++KPVENLPSAE+QLER+EAE RAG KE IVTPLMDFVRQKRAAK GSQR +N
Sbjct: 89 FLDLISKPVENLPSAEVQLERREAE-RAGAAKEVPIVTPLMDFVRQKRAAKGGSQRSLSN 147
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G SPG+S S+STKR SEKRR TSMYVLRDS KNTSGK+ STY+L+ RR+DQ
Sbjct: 148 GKLSRRATGTSPGSSGSSSTKRGSEKRRVSTSMYVLRDSVKNTSGKDKSTYILVPRREDQ 207
Query: 951 QLSEKSVA--VGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
+L++KSV+ + + TE EDE VP D +T A V
Sbjct: 208 ELTDKSVSLVIASGTETAEDEKVPKTDGAISTATGSADTGKKKVLLLKGKEREIPNAPEV 267
Query: 1125 -VSPQQSI--TVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQ 1295
VS QQS+ +RNS S AFKQ+QR RDVSGR+IRSILS K+AR QS+ A +QS+QQ
Sbjct: 268 GVSQQQSVISPIRNSPNSTAFKQSQR--RDVSGRMIRSILS-KEARQGQSTTA-IQSDQQ 323
Query: 1296 MQTVNLEKDKRPPRPNNIRSILKDH---VSPHAVISDGDTKRASDDKFVANDLHNVTSVN 1466
QT+NLEK+KRPPRP +RS+LKDH +S A D + KR DDK ND+H V+SVN
Sbjct: 324 SQTMNLEKEKRPPRPTTMRSVLKDHLSSISQAASSCDTEMKRIQDDKVAVNDVHGVSSVN 383
Query: 1467 EKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSS-SLHAQFLSDSFEGMTISQQAAA 1643
EKQ++R RNKDRPDRGVWTPLRRSD SHASD SS S Q LSDS EGMTI+Q A
Sbjct: 384 EKQEKRARNKDRPDRGVWTPLRRSDISHASDDSSSSSFSGPTQVLSDSLEGMTINQLVAP 443
Query: 1644 GVSKTGDDVVEDTDSGNNS-FTGGKPRSMDXXXXXXXXXXXXXXXANEFTLC--EMKADM 1814
G K GDDV+++ +SGN S F GK RS + ++ + C E+K+++
Sbjct: 444 GAGKLGDDVLDEPESGNKSFFPSGKARSQE-ASVHNSRVGRGGNVSSAYDSCSHEVKSEI 502
Query: 1815 PNASKSGEIKVIGTG------LVNGSHRHVVRRGP-HGLKEIDG-SPNFSEGKPSKRG-G 1967
+ASK GE+K IG+G NGSHR RRG HG K+IDG S + S+GKPSKRG
Sbjct: 503 HHASK-GEVKTIGSGRSNFSSAENGSHRQFSRRGSVHGGKDIDGNSLSTSDGKPSKRGNA 561
Query: 1968 TGYGSHEKQVWVQKSGSGS 2024
TGYGSHEKQVWVQK GSGS
Sbjct: 562 TGYGSHEKQVWVQKLGSGS 580
>ref|XP_008802925.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 568
Score = 592 bits (1525), Expect = e-166
Identities = 340/607 (56%), Positives = 404/607 (66%), Gaps = 8/607 (1%)
Frame = +3
Query: 228 HMKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYID 407
HMKD +DRTK VLR LPP ISQ+ LME+ID RFA RY+WFCFR G NSQKN H+RAYID
Sbjct: 9 HMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSQKNPHHSRAYID 68
Query: 408 FNNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYL 587
F PEDV+EFA+FF GHVFVN+KG+QFK VEYAPSQR PK WSKKD REGTI KDPEYL
Sbjct: 69 FKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIKDPEYL 128
Query: 588 EFLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQST 767
EFL+ LAKP E LPSAEIQLER+EA ERAGGQK+ +IVTPLM+FVRQKR AK GSQR S
Sbjct: 129 EFLEHLAKPAEYLPSAEIQLERREA-ERAGGQKDMVIVTPLMEFVRQKRVAKSGSQRYS- 186
Query: 768 NGRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDD 947
NG+LSRR GG S + S S++R+SEKRR T M+VLRDST N SGK+ TY+L+ R+DD
Sbjct: 187 NGKLSRRSGGAS-SSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVSRKDD 245
Query: 948 QQLSEKSVAVGAATEIL---EDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVS 1118
QQL +KS+ V +A+ I E++ V A R VS
Sbjct: 246 QQLLDKSIGVASASSIKVLEEEKGVEAGKKR--------------ILLLKAKEREDTHVS 291
Query: 1119 GVVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQM 1298
G S QQ+++ GS AFKQNQR E GRII SILSNKD+ QS V QSEQQ
Sbjct: 292 GGSSRQQNVSSVKKSGSYAFKQNQRHE--ARGRIIGSILSNKDS--CQSYVTASQSEQQT 347
Query: 1299 QTVNLEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSVNE 1469
TVNL+KDK PPRP N+ S+LK+H+S P A I D + K + DDK N+L+ + S +E
Sbjct: 348 PTVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVSTSE 407
Query: 1470 KQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGV 1649
K DR TRNKDRPDR VW PLR SDGSHASD L SS++ AQ S S +IS
Sbjct: 408 KHDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQVAR 467
Query: 1650 SKTGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASK 1829
K GDD V NNS G + +L E+KA + NA++
Sbjct: 468 VKAGDDDVACLGCLNNSSAGYDIPT---------------------SLGEIKAHVSNANQ 506
Query: 1830 SGEIKVIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQVWV 2003
+ E+K +G GSHR++ RRGP HG+KE+D S N+ EGKPSKRGG GYGSHE+QVWV
Sbjct: 507 TAEVKTLG-----GSHRYIGRRGPVHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQVWV 561
Query: 2004 QKSGSGS 2024
QKSGSG+
Sbjct: 562 QKSGSGT 568
>ref|XP_008802922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera] gi|672166009|ref|XP_008802923.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X1 [Phoenix dactylifera]
gi|672166011|ref|XP_008802924.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X1 [Phoenix
dactylifera]
Length = 570
Score = 587 bits (1512), Expect = e-164
Identities = 340/609 (55%), Positives = 404/609 (66%), Gaps = 10/609 (1%)
Frame = +3
Query: 228 HMKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNS--QKNQRHARAY 401
HMKD +DRTK VLR LPP ISQ+ LME+ID RFA RY+WFCFR G NS QKN H+RAY
Sbjct: 9 HMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSCSQKNPHHSRAY 68
Query: 402 IDFNNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPE 581
IDF PEDV+EFA+FF GHVFVN+KG+QFK VEYAPSQR PK WSKKD REGTI KDPE
Sbjct: 69 IDFKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIKDPE 128
Query: 582 YLEFLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQ 761
YLEFL+ LAKP E LPSAEIQLER+EA ERAGGQK+ +IVTPLM+FVRQKR AK GSQR
Sbjct: 129 YLEFLEHLAKPAEYLPSAEIQLERREA-ERAGGQKDMVIVTPLMEFVRQKRVAKSGSQRY 187
Query: 762 STNGRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRR 941
S NG+LSRR GG S + S S++R+SEKRR T M+VLRDST N SGK+ TY+L+ R+
Sbjct: 188 S-NGKLSRRSGGAS-SSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVSRK 245
Query: 942 DDQQLSEKSVAVGAATEIL---EDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXX 1112
DDQQL +KS+ V +A+ I E++ V A R
Sbjct: 246 DDQQLLDKSIGVASASSIKVLEEEKGVEAGKKR--------------ILLLKAKEREDTH 291
Query: 1113 VSGVVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQ 1292
VSG S QQ+++ GS AFKQNQR E GRII SILSNKD+ QS V QSEQ
Sbjct: 292 VSGGSSRQQNVSSVKKSGSYAFKQNQRHE--ARGRIIGSILSNKDS--CQSYVTASQSEQ 347
Query: 1293 QMQTVNLEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSV 1463
Q TVNL+KDK PPRP N+ S+LK+H+S P A I D + K + DDK N+L+ + S
Sbjct: 348 QTPTVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVST 407
Query: 1464 NEKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAA 1643
+EK DR TRNKDRPDR VW PLR SDGSHASD L SS++ AQ S S +IS
Sbjct: 408 SEKHDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQV 467
Query: 1644 GVSKTGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNA 1823
K GDD V NNS G + +L E+KA + NA
Sbjct: 468 ARVKAGDDDVACLGCLNNSSAGYDIPT---------------------SLGEIKAHVSNA 506
Query: 1824 SKSGEIKVIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQV 1997
+++ E+K +G GSHR++ RRGP HG+KE+D S N+ EGKPSKRGG GYGSHE+QV
Sbjct: 507 NQTAEVKTLG-----GSHRYIGRRGPVHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQV 561
Query: 1998 WVQKSGSGS 2024
WVQKSGSG+
Sbjct: 562 WVQKSGSGT 570
>ref|XP_008802926.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
[Phoenix dactylifera]
Length = 567
Score = 586 bits (1510), Expect = e-164
Identities = 339/606 (55%), Positives = 401/606 (66%), Gaps = 7/606 (1%)
Frame = +3
Query: 228 HMKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNS--QKNQRHARAY 401
HMKD +DRTK VLR LPP ISQ+ LME+ID RFA RY+WFCFR G NS QKN H+RAY
Sbjct: 9 HMKDPLDRTKVVLRRLPPAISQATLMEEIDGRFAGRYKWFCFRPGKNSCSQKNPHHSRAY 68
Query: 402 IDFNNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPE 581
IDF PEDV+EFA+FF GHVFVN+KG+QFK VEYAPSQR PK WSKKD REGTI KDPE
Sbjct: 69 IDFKRPEDVVEFAEFFDGHVFVNKKGSQFKVHVEYAPSQRIPKTWSKKDVREGTIIKDPE 128
Query: 582 YLEFLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQ 761
YLEFL+ LAKP E LPSAEIQLER+EA ERAGGQK+ +IVTPLM+FVRQKR AK GSQR
Sbjct: 129 YLEFLEHLAKPAEYLPSAEIQLERREA-ERAGGQKDMVIVTPLMEFVRQKRVAKSGSQRY 187
Query: 762 STNGRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRR 941
S NG+LSRR GG S + S S++R+SEKRR T M+VLRDST N SGK+ TY+L+ R+
Sbjct: 188 S-NGKLSRRSGGAS-SSGSKPSSRRSSEKRRVSTPMFVLRDSTMNISGKDKPTYILVSRK 245
Query: 942 DDQQLSEKSVAVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSG 1121
DDQQL +KS+ V +A+ I E A R VSG
Sbjct: 246 DDQQLLDKSIGVASASSIKVLEEEKAGKKR--------------ILLLKAKEREDTHVSG 291
Query: 1122 VVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQ 1301
S QQ+++ GS AFKQNQR E GRII SILSNKD+ QS V QSEQQ
Sbjct: 292 GSSRQQNVSSVKKSGSYAFKQNQRHE--ARGRIIGSILSNKDS--CQSYVTASQSEQQTP 347
Query: 1302 TVNLEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSVNEK 1472
TVNL+KDK PPRP N+ S+LK+H+S P A I D + K + DDK N+L+ + S +EK
Sbjct: 348 TVNLDKDKHPPRPPNMCSMLKNHISSKPPLASIYDNEGKNSLDDKVAGNNLNGLVSTSEK 407
Query: 1473 QDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVS 1652
DR TRNKDRPDR VW PLR SDGSHASD L SS++ AQ S S +IS
Sbjct: 408 HDRCTRNKDRPDRAVWAPLRCSDGSHASDETLSSSAVPAQRSSSSCSSESISLSQQVARV 467
Query: 1653 KTGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKS 1832
K GDD V NNS G + +L E+KA + NA+++
Sbjct: 468 KAGDDDVACLGCLNNSSAGYDIPT---------------------SLGEIKAHVSNANQT 506
Query: 1833 GEIKVIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQVWVQ 2006
E+K +G GSHR++ RRGP HG+KE+D S N+ EGKPSKRGG GYGSHE+QVWVQ
Sbjct: 507 AEVKTLG-----GSHRYIGRRGPVHGVKEVDASLNYHEGKPSKRGGPAGYGSHERQVWVQ 561
Query: 2007 KSGSGS 2024
KSGSG+
Sbjct: 562 KSGSGT 567
>ref|XP_006858584.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2
[Amborella trichopoda] gi|548862693|gb|ERN20051.1|
hypothetical protein AMTR_s00071p00188270 [Amborella
trichopoda]
Length = 599
Score = 585 bits (1508), Expect = e-164
Identities = 334/617 (54%), Positives = 411/617 (66%), Gaps = 19/617 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD +DRTK V+R LPP ++Q ALME+ID+RF+ RY W FR G NS KNQRH+R YIDF
Sbjct: 1 MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDV+EFA+FF GHVFVNEKG+QFK +VEYAPSQR PKPWSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ LAKP ENLPSAEIQLER+EA ERAG KE+LIVTPLMDFVRQKRAAK G+ R S N
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREA-ERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSAN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+ SRR G+S + S S KR E+R+ TSMYVLRDSTK TS K+ STY L+ RRD+Q
Sbjct: 180 GKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQ 239
Query: 951 QLSEKSVAVG--AATEILEDEAVPAADFRTTTGVSGAIDI-XXXXXXXXXXXXXXXXVSG 1121
+L + S AV A E L+DE+V AD T V G ++ SG
Sbjct: 240 KLPDNSSAVSALAGPEALDDESVGVADVTAAT-VGGTLESGKKKVLLLKGKDREASQASG 298
Query: 1122 VVSPQQSIT--VRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQ 1295
V QQ+++ +RN GSA F+Q+QR RD + R+++SILSNKD R + V T Q+EQQ
Sbjct: 299 SVVQQQTVSSPIRNLSGSAPFRQSQR--RDGNSRMVKSILSNKDGRQVPAHVLT-QTEQQ 355
Query: 1296 MQTVNLEKDKRPPRPNNIRSILKDHVSPHAV---ISDGDTKRASDDKFVANDLHNVTSVN 1466
+Q ++LEKDKRPPRPN+ R KDH+S + + +SD D K+A D K ND + + N
Sbjct: 356 LQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPAN 415
Query: 1467 EKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAG 1646
EKQ++RTRNKDRPDR VWTPLRRSDG H D +Q SDS E ++ +Q+
Sbjct: 416 EKQEKRTRNKDRPDRAVWTPLRRSDGIHTVD--------ESQMTSDSLEKLSNAQEL--- 464
Query: 1647 VSKTGDDVVEDTDSGNN-SFTGGKPRSMDXXXXXXXXXXXXXXXANEFTL--CEMKADMP 1817
K GDD E G+N S + GK R+ D ++E +L + K D
Sbjct: 465 --KLGDDTEECDGLGSNASSSMGKSRTSDLGYHNSRSGRGASSSSSEHSLNQGDTKFDTS 522
Query: 1818 NASKSGEIKVIGTG------LVNGSHRHVVRRGPH-GLKEIDGSPNFSEGKPSKRGG-TG 1973
+AS+S E+K GTG + NGSHRH RR GLK+ DGS N +GKP KRGG
Sbjct: 523 SASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGKPVKRGGIPS 582
Query: 1974 YGSHEKQVWVQKSGSGS 2024
YG+HEKQ+WVQKSG+G+
Sbjct: 583 YGAHEKQIWVQKSGTGT 599
>ref|XP_011628613.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1
[Amborella trichopoda]
Length = 600
Score = 583 bits (1503), Expect = e-163
Identities = 335/618 (54%), Positives = 412/618 (66%), Gaps = 20/618 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD +DRTK V+R LPP ++Q ALME+ID+RF+ RY W FR G NS KNQRH+R YIDF
Sbjct: 1 MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDV+EFA+FF GHVFVNEKG+QFK +VEYAPSQR PKPWSKKDGREGTIFKDPEYLE
Sbjct: 61 KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGS-QRQST 767
FL+ LAKP ENLPSAEIQLER+EA ERAG KE+LIVTPLMDFVRQKRAAK G+ QR S
Sbjct: 121 FLEFLAKPAENLPSAEIQLERREA-ERAGASKESLIVTPLMDFVRQKRAAKSGTLQRSSA 179
Query: 768 NGRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDD 947
NG+ SRR G+S + S S KR E+R+ TSMYVLRDSTK TS K+ STY L+ RRD+
Sbjct: 180 NGKTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDE 239
Query: 948 QQLSEKSVAVG--AATEILEDEAVPAADFRTTTGVSGAIDI-XXXXXXXXXXXXXXXXVS 1118
Q+L + S AV A E L+DE+V AD T V G ++ S
Sbjct: 240 QKLPDNSSAVSALAGPEALDDESVGVADVTAAT-VGGTLESGKKKVLLLKGKDREASQAS 298
Query: 1119 GVVSPQQSIT--VRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQ 1292
G V QQ+++ +RN GSA F+Q+QR RD + R+++SILSNKD R + V T Q+EQ
Sbjct: 299 GSVVQQQTVSSPIRNLSGSAPFRQSQR--RDGNSRMVKSILSNKDGRQVPAHVLT-QTEQ 355
Query: 1293 QMQTVNLEKDKRPPRPNNIRSILKDHVSPHAV---ISDGDTKRASDDKFVANDLHNVTSV 1463
Q+Q ++LEKDKRPPRPN+ R KDH+S + + +SD D K+A D K ND + +
Sbjct: 356 QLQGLSLEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPA 415
Query: 1464 NEKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAA 1643
NEKQ++RTRNKDRPDR VWTPLRRSDG H D +Q SDS E ++ +Q+
Sbjct: 416 NEKQEKRTRNKDRPDRAVWTPLRRSDGIHTVD--------ESQMTSDSLEKLSNAQEL-- 465
Query: 1644 GVSKTGDDVVEDTDSGNN-SFTGGKPRSMDXXXXXXXXXXXXXXXANEFTL--CEMKADM 1814
K GDD E G+N S + GK R+ D ++E +L + K D
Sbjct: 466 ---KLGDDTEECDGLGSNASSSMGKSRTSDLGYHNSRSGRGASSSSSEHSLNQGDTKFDT 522
Query: 1815 PNASKSGEIKVIGTG------LVNGSHRHVVRRGPH-GLKEIDGSPNFSEGKPSKRGG-T 1970
+AS+S E+K GTG + NGSHRH RR GLK+ DGS N +GKP KRGG
Sbjct: 523 SSASRSLEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGKPVKRGGIP 582
Query: 1971 GYGSHEKQVWVQKSGSGS 2024
YG+HEKQ+WVQKSG+G+
Sbjct: 583 SYGAHEKQIWVQKSGTGT 600
>ref|XP_010930556.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Elaeis guineensis]
Length = 575
Score = 570 bits (1468), Expect = e-159
Identities = 336/610 (55%), Positives = 393/610 (64%), Gaps = 12/610 (1%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP ISQSALMEQID RFA RY W CFR G S KNQR++RAY++F
Sbjct: 1 MKDPFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
EDV+EFA+ F GH+FVNEKGAQFK +VEYAPSQR P+ WSKKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPRAWSKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEA ERAG KET IVTPLMDFVRQKRAAK G QR N
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEA-ERAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGN 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R GG+S KR S+KRR+ TSMYVLRDSTKN K+ STY+L RR+DQ
Sbjct: 179 GKLSKRAGGVS---------KRGSDKRRSSTSMYVLRDSTKNGGAKDKSTYILGSRREDQ 229
Query: 951 QLSEKSVAVGAAT--EILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
QL +K +AV +A+ E LEDE V + V SG
Sbjct: 230 QLPDKPIAVASASGAEALEDEFVSGSSGSNAGPVEAG---KSKIVLLKGKGKEGSHASGG 286
Query: 1125 VSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQT 1304
+ QQ++T + S Q R + GRIIRSILS K+AR QS +A+ EQQMQT
Sbjct: 287 LVHQQNVT-SPVRSSPTLTSKQSRRLESGGRIIRSILS-KEARQTQSYIASSLPEQQMQT 344
Query: 1305 VNLEKDKRPPRPNNIRSILKDHV---SPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQ 1475
N+EKDKRPPRP + RSI +DHV SP +SDGD KR DDK H S+++K
Sbjct: 345 ANMEKDKRPPRPPSTRSISRDHVSSGSPLPSVSDGDDKRYIDDKVGVGYKHGSVSISDKH 404
Query: 1476 DRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSK 1655
DRRTRNKDRPDRGVW PLRRSD S ++DG SS A L+DS E ++ISQQ AAG+
Sbjct: 405 DRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSLSSEPALILADSLEDISISQQ-AAGIKV 463
Query: 1656 TGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSG 1835
D VV N+ GG S+ E K+D P+AS++
Sbjct: 464 ADDGVVV-----QNALIGGGSSSLADRGMPLGQG-------------ERKSDSPSASRTE 505
Query: 1836 EIKVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGTGYGSHEKQ 1994
E+K G G V NGSHRH RRGP G KE + S + SEGK SKRG +GYGSHE+Q
Sbjct: 506 EMKSHGGGRVSLSTVENGSHRHAGRRGPARGSKEAESSSSISEGKHSKRGSSGYGSHERQ 565
Query: 1995 VWVQKSGSGS 2024
VWVQKSGS S
Sbjct: 566 VWVQKSGSAS 575
>ref|XP_008786472.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 574
Score = 569 bits (1467), Expect = e-159
Identities = 336/610 (55%), Positives = 396/610 (64%), Gaps = 12/610 (1%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP ISQSALMEQID RFA RY W CFR G S KNQR++RAY++F
Sbjct: 1 MKDSFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
EDV+EFA+ F GH+FVNEKGAQFK +VEYAPSQR PKPW KKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEAE RAG KET IVTPLMDFVRQKRAAK G QR N
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEAE-RAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGN 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R GG+S KR S+KRR TSMYVLRD+TKN K+ TY+L+ RR+DQ
Sbjct: 179 GKLSKRAGGVS---------KRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRREDQ 229
Query: 951 QLSEK--SVAVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
QL +K SVA + TE LEDE V + T+ V SG
Sbjct: 230 QLPDKPISVASSSGTEALEDEFVSGSSGSTSFPVEAG---KSKIMLLKGKGREGSHASGG 286
Query: 1125 VSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQT 1304
+ QQ++T S ++ KQ++R E SGRIIR ILS K+AR QS + Q EQQMQT
Sbjct: 287 LVQQQNLTSLRSSPTSTSKQSRRLES--SGRIIRGILS-KEARQTQSYTVSSQPEQQMQT 343
Query: 1305 VNLEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSVNEKQ 1475
N+EKDKRPPRP + RSI +DHVS P +SDGD KR DDK A H S+++K
Sbjct: 344 ANVEKDKRPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKH 403
Query: 1476 DRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSK 1655
DRRTRNKDRPDRGVW PLRRSD S ++DG SS A L+DS E ++ISQQAA G+
Sbjct: 404 DRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSSSPEPALILADSLEDVSISQQAA-GIRL 462
Query: 1656 TGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSG 1835
D VV N+ G S+ + E K+D +AS++
Sbjct: 463 ADDGVVVQ-----NAHVGRGSSSL-------------ADHGMQLGQGERKSDSLSASRTE 504
Query: 1836 EIKVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGTGYGSHEKQ 1994
E+K G G V NGSHRH RRGP G K+ + S + SEGK SKRG +G+GSHE+Q
Sbjct: 505 EMKSHGGGRVSLFVVENGSHRHAGRRGPVRGSKDAESSSSISEGKHSKRGSSGFGSHERQ 564
Query: 1995 VWVQKSGSGS 2024
VWVQKSGS S
Sbjct: 565 VWVQKSGSAS 574
>ref|XP_008786471.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera]
Length = 581
Score = 562 bits (1449), Expect = e-157
Identities = 336/617 (54%), Positives = 396/617 (64%), Gaps = 19/617 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP ISQSALMEQID RFA RY W CFR G S KNQR++RAY++F
Sbjct: 1 MKDSFDRTKVVLRHLPPSISQSALMEQIDGRFAGRYDWACFRPGKASHKNQRYSRAYLNF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
EDV+EFA+ F GH+FVNEKGAQFK +VEYAPSQR PKPW KKDGREGTI KDPEYLE
Sbjct: 61 KRLEDVVEFAELFDGHIFVNEKGAQFKALVEYAPSQRVPKPWPKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEAE RAG KET IVTPLMDFVRQKRAAK G QR N
Sbjct: 121 FLELLSKP-EHLPSAEIQLERKEAE-RAGAPKETPIVTPLMDFVRQKRAAKSGIQRLPGN 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R GG+S KR S+KRR TSMYVLRD+TKN K+ TY+L+ RR+DQ
Sbjct: 179 GKLSKRAGGVS---------KRGSDKRRLSTSMYVLRDNTKNGGAKDKPTYILVSRREDQ 229
Query: 951 QLSEK--SVAVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
QL +K SVA + TE LEDE V + T+ V SG
Sbjct: 230 QLPDKPISVASSSGTEALEDEFVSGSSGSTSFPVEAG---KSKIMLLKGKGREGSHASGG 286
Query: 1125 VSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQT 1304
+ QQ++T S ++ KQ++R E SGRIIR ILS K+AR QS + Q EQQMQT
Sbjct: 287 LVQQQNLTSLRSSPTSTSKQSRRLES--SGRIIRGILS-KEARQTQSYTVSSQPEQQMQT 343
Query: 1305 VNLEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSVNEKQ 1475
N+EKDKRPPRP + RSI +DHVS P +SDGD KR DDK A H S+++K
Sbjct: 344 ANVEKDKRPPRPPSARSIPRDHVSSSSPLPSVSDGDDKRYIDDKVAAGYKHGSVSISDKH 403
Query: 1476 DRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSK 1655
DRRTRNKDRPDRGVW PLRRSD S ++DG SS A L+DS E ++ISQQAA G+
Sbjct: 404 DRRTRNKDRPDRGVWAPLRRSDRSQSNDGTHSSSPEPALILADSLEDVSISQQAA-GIRL 462
Query: 1656 TGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSG 1835
D VV N+ G S+ + E K+D +AS++
Sbjct: 463 ADDGVVVQ-----NAHVGRGSSSL-------------ADHGMQLGQGERKSDSLSASRTE 504
Query: 1836 EIKVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGTGYGSHE-- 1988
E+K G G V NGSHRH RRGP G K+ + S + SEGK SKRG +G+GSHE
Sbjct: 505 EMKSHGGGRVSLFVVENGSHRHAGRRGPVRGSKDAESSSSISEGKHSKRGSSGFGSHEVS 564
Query: 1989 -----KQVWVQKSGSGS 2024
+QVWVQKSGS S
Sbjct: 565 QDYDIRQVWVQKSGSAS 581
>ref|XP_010910195.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Elaeis guineensis] gi|743762841|ref|XP_010910210.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X1 [Elaeis guineensis]
gi|743762844|ref|XP_010910217.1| PREDICTED: regulator of
nonsense transcripts UPF3-like isoform X1 [Elaeis
guineensis]
Length = 566
Score = 550 bits (1417), Expect = e-153
Identities = 328/609 (53%), Positives = 396/609 (65%), Gaps = 11/609 (1%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD +DRTK VLR LPP I Q+ LME+ID RFA RY+WFCFR G N++KNQ H+RAYIDF
Sbjct: 1 MKDPLDRTKVVLRRLPPAIPQATLMEEIDGRFAGRYKWFCFRPGKNNRKNQHHSRAYIDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
N EDV+EFA+FF GH+FVNEKG QFK VEYAPSQ PK SKKD REGTI KDPEYLE
Sbjct: 61 NRSEDVVEFAEFFDGHIFVNEKGGQFKVHVEYAPSQHVPKRRSKKDVREGTIIKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ LAKP ENLPSAEIQLER+EA +RAGGQK+ +IVTPLM+FVRQKR AK GSQR S N
Sbjct: 121 FLEHLAKPAENLPSAEIQLERREA-QRAGGQKDMVIVTPLMEFVRQKRVAKSGSQR-SVN 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+L RR G S + S+ S++R+SEKRR MYVLRDS +N SGK+ TY+L+ R+DDQ
Sbjct: 179 GKLGRRSRGAS-SSGSNPSSRRSSEKRRVSKPMYVLRDSRRNISGKDKPTYILVSRKDDQ 237
Query: 951 QLSEKSVAVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGVVS 1130
QL +KS+AV +A+ I EA+ A TG + + VS S
Sbjct: 238 QLLDKSIAVASASSI---EALEEAK-GVETGKKRILTL-------KAKVTEDYHVSDGSS 286
Query: 1131 PQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQTVN 1310
S ++S S FKQNQ E SGRI+RSILSNKD+ QS V QSEQQ T N
Sbjct: 287 RNVSSVKKSS--SYTFKQNQGHE--TSGRIVRSILSNKDS--CQSYVTASQSEQQTPTGN 340
Query: 1311 LEKDKRPPRPNNIRSILKDHVS---PHAVISDGDTKRASDDKFVANDLHNVTSVNEKQDR 1481
L+KDK PP P N+ S+LK H++ P A I D + K + DDK N+L+ + S +EK +
Sbjct: 341 LDKDKHPPTPPNMCSMLKVHIASKPPLASIYDSEGKNSLDDKVPGNNLNCLVSTSEKHNG 400
Query: 1482 RTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKTG 1661
TRNKDRPDR VW P R SDG HA D L S S+ AQ S S E +++SQQA K G
Sbjct: 401 CTRNKDRPDRVVWAPFRCSDGLHADDETLSSCSVPAQRSSCSSESISLSQQATG--IKAG 458
Query: 1662 DDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGEI 1841
DD V NN G + +L E+KA M NA+++ E+
Sbjct: 459 DDDVACMGRLNNPSAGYDIPT---------------------SLGEIKAHMSNANRTAEV 497
Query: 1842 KVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQV 1997
K G G V NGSHR++ RGP HG+KE+D S N+ EGKPSKRGG GYGSHE+QV
Sbjct: 498 KTFGGGRVSPFSAKNGSHRYIGHRGPVHGMKEVDASLNYREGKPSKRGGPAGYGSHERQV 557
Query: 1998 WVQKSGSGS 2024
WVQKSGSG+
Sbjct: 558 WVQKSGSGT 566
>ref|XP_010912655.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Elaeis
guineensis]
Length = 562
Score = 539 bits (1388), Expect = e-150
Identities = 327/612 (53%), Positives = 386/612 (63%), Gaps = 16/612 (2%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK DRTK VLRHLPP ISQSALMEQI RFA RY W CFR G S KNQR++R+Y+ F
Sbjct: 1 MKGPFDRTKIVLRHLPPSISQSALMEQIGERFAGRYDWVCFRPGKASPKNQRYSRSYLSF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDV+EFA+FF GH+FVNEKGAQFK +VEYAPSQ PKP SKKDGREGTI KDPEYLE
Sbjct: 61 KRPEDVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEA ERAG QKE IVTPLMDFVRQKRAAK G+QR + N
Sbjct: 121 FLEHLSKP-EHLPSAEIQLERKEA-ERAGAQKEMPIVTPLMDFVRQKRAAKNGAQRLAGN 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R G+ KR SEKRR TSMYVLRD KN S K+ TY+L+ RR++Q
Sbjct: 179 GKLSKRAMGV---------MKRGSEKRRLSTSMYVLRDGRKNGSSKDKPTYILVPRREEQ 229
Query: 951 QLSEKSVAVGAAT--EILEDEAVPAADFRTTTG--VSGAIDI--XXXXXXXXXXXXXXXX 1112
QL +KS AV +A+ E LEDE F T + +SG+++
Sbjct: 230 QLPDKSFAVASASGAEALEDE------FGTVSNGLISGSVEARKSKIVLLKGKEREGSHA 283
Query: 1113 VSGVVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQ 1292
G V Q T S ++ KQNQR E GRIIRSILSN+ QS++A+ Q EQ
Sbjct: 284 SGGFVQLQNVTTTARSSPTSTSKQNQRLE--AGGRIIRSILSNE---VRQSNMASSQPEQ 338
Query: 1293 QMQTVNLEKDKRPPRPNNIRSILKDHV---SPHAVISDGDTKRASDDKFVANDLHNVTSV 1463
MQT NLEKDKRPPRP + RSI KDHV S ISDGD KR DD + S+
Sbjct: 339 HMQTTNLEKDKRPPRPPSTRSISKDHVCGSSSPVSISDGDDKRYIDDMVAMSYKQGSVSI 398
Query: 1464 NEKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAA 1643
+K ++RTRNKDRPD GVW PL RSD S ++DG SSS AQ L DS E ++ISQQAA
Sbjct: 399 VDKHEKRTRNKDRPDWGVWAPLCRSDRSQSNDGTFSSSSEAAQILVDSIENVSISQQAAG 458
Query: 1644 GVSKTGDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNA 1823
+K DD V ++ + G E K+D P+A
Sbjct: 459 --NKVADDNVVVRNAHDMPIGQG----------------------------ERKSDTPSA 488
Query: 1824 SKSGEIKVIGTG------LVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGTGYGS 1982
S++ E+K G G L NGSHRHV RRGP K+ + S + SEGK SKRG + YGS
Sbjct: 489 SRTEEMKSHGGGRVSLSMLENGSHRHVGRRGPARASKDAESSSSISEGKHSKRGSSSYGS 548
Query: 1983 HEKQVWVQKSGS 2018
HE+QVWVQKSGS
Sbjct: 549 HERQVWVQKSGS 560
>ref|XP_008795266.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
[Phoenix dactylifera]
Length = 562
Score = 539 bits (1388), Expect = e-150
Identities = 329/616 (53%), Positives = 393/616 (63%), Gaps = 18/616 (2%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP ISQSAL+EQID RF+ RY W CFR G S KNQR++RAY++F
Sbjct: 1 MKDPFDRTKIVLRHLPPSISQSALIEQIDERFSGRYDWLCFRPGKASHKNQRYSRAYLNF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PE V+EFA+FF GH+FVNEKGAQFK +VEYAPSQ PKP SKKDGREGTI KDPEYLE
Sbjct: 61 KRPEVVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEA ERAG QKET IVTPLM+FVRQK AAK G+QR +
Sbjct: 121 FLEHLSKP-EHLPSAEIQLERKEA-ERAGAQKETPIVTPLMNFVRQKLAAKNGAQRLAGY 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R G+ KR SEKRR TSMYVLRDS KN S K+ +TY+LM RR++Q
Sbjct: 179 GKLSKRAIGV---------IKRGSEKRRLSTSMYVLRDSRKNGSAKDKATYILMPRREEQ 229
Query: 951 QLSEKSVAVGAAT--EILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
QL +KS+AV +A+ E LEDE V ++ T+ V SG
Sbjct: 230 QLPDKSIAVASASGAEALEDEFVTVSNGLTSRAVEAG---KSKIVLLKGKEREGSHASGG 286
Query: 1125 VSPQQSI--TVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQM 1298
+ QQ++ TVR+S S + KQNQR E SGRIIR+ILSN+ QS +A+ Q EQ M
Sbjct: 287 LVQQQNVTTTVRSSPTSTS-KQNQRLE--ASGRIIRTILSNEG---RQSYMASSQPEQHM 340
Query: 1299 QTVNLEKDKRPPRPNNIRSILKDHVSPH---AVISDGDTKRASDDKFVANDLHNVTSVNE 1469
T NLEKDKRP RP + RSI KD VS A ISD KR DD + H S+++
Sbjct: 341 HTTNLEKDKRPARPPSARSISKDRVSSSSSPASISDNGDKRYIDDMVAMSYKHGSVSISD 400
Query: 1470 KQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGV 1649
K ++RTRNKDRPDRGVW PLRRSD S ++DG L SSS AQ L DS E +++SQQ AG+
Sbjct: 401 KHEKRTRNKDRPDRGVWAPLRRSDRSQSNDGTLSSSSEAAQILVDSLENVSMSQQ-TAGI 459
Query: 1650 SKTGDDVV----EDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMP 1817
D+VV D G E K+D P
Sbjct: 460 KVADDNVVVWNAHDMPIGQG---------------------------------ERKSDTP 486
Query: 1818 NASKSGEIKVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGTGY 1976
+AS++ E+K G V NGSHRHV RRGP K+ + S + SE K SKRG +GY
Sbjct: 487 SASRTEEMKSHGGARVGLSIVENGSHRHVGRRGPARASKDAESSLSISEVKHSKRGSSGY 546
Query: 1977 GSHEKQVWVQKSGSGS 2024
GSHE+QVWVQKSGS S
Sbjct: 547 GSHERQVWVQKSGSAS 562
>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
vinifera]
Length = 515
Score = 537 bits (1383), Expect = e-149
Identities = 325/601 (54%), Positives = 379/601 (63%), Gaps = 4/601 (0%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK +DRTK V+RHLPP IS++A +EQID F RY FR G NSQK Q ++RAY+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GHVFVNEKG QFKTIVEYAPSQR PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
F++ LAKPVENLPSAEIQLER+EA ERAG K+T IVTPLMDFVRQKRAAK S+R +N
Sbjct: 121 FVELLAKPVENLPSAEIQLERREA-ERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G S GN S S+KR SEKRR T+MYVLRD+ K+TS K+ ST++L+ +RDDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 951 QLSEKSV--AVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
LS+KSV A G E LE+E +GVSGA+D V
Sbjct: 240 LLSDKSVNLAAGGGAEALEEE----------SGVSGAVDAGKKKVLLLKGKEREISHQNV 289
Query: 1125 VSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQT 1304
SP V+N G+ A KQNQRRE SGRIIRSIL NKDAR +QSS+ Q+EQQ Q
Sbjct: 290 TSP-----VKNILGANAPKQNQRREG--SGRIIRSILLNKDARQSQSSM--FQTEQQSQA 340
Query: 1305 VNLEKDKRPPRPNNIRSILKDHVSPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQDRR 1484
NLEK+KRPPRP PH ++ +T A DDK V ND+H+ V+EKQD+R
Sbjct: 341 SNLEKEKRPPRP------------PHIQLASKETNGAQDDKVVGNDVHSF--VSEKQDKR 386
Query: 1485 TRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKTGD 1664
TRNKDRPDRGVWTPLRRSDGSHASD L SSS SD EG ++ +++G+
Sbjct: 387 TRNKDRPDRGVWTPLRRSDGSHASDESL-SSSASQPTSSDFPEGSHGEMRSDMSNARSGE 445
Query: 1665 DVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGEIK 1844
V+ SG GG
Sbjct: 446 --VKALGSGR----GGH------------------------------------------- 456
Query: 1845 VIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGT-GYGSHEKQVWVQKSGS 2018
+ L NGSH+H RRGP H +K+ DGS SEGK SKRG GYGSHEKQVWVQKS S
Sbjct: 457 ---SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSS 513
Query: 2019 G 2021
G
Sbjct: 514 G 514
>ref|XP_008795263.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
[Phoenix dactylifera] gi|672142802|ref|XP_008795264.1|
PREDICTED: regulator of nonsense transcripts UPF3-like
isoform X1 [Phoenix dactylifera]
Length = 565
Score = 535 bits (1377), Expect = e-148
Identities = 331/620 (53%), Positives = 394/620 (63%), Gaps = 22/620 (3%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MKD DRTK VLRHLPP ISQSAL+EQID RF+ RY W CFR G S KNQR++RAY++F
Sbjct: 1 MKDPFDRTKIVLRHLPPSISQSALIEQIDERFSGRYDWLCFRPGKASHKNQRYSRAYLNF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PE V+EFA+FF GH+FVNEKGAQFK +VEYAPSQ PKP SKKDGREGTI KDPEYLE
Sbjct: 61 KRPEVVVEFAEFFDGHIFVNEKGAQFKVLVEYAPSQHVPKPSSKKDGREGTISKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ L+KP E+LPSAEIQLERKEA ERAG QKET IVTPLM+FVRQK AAK G+QR +
Sbjct: 121 FLEHLSKP-EHLPSAEIQLERKEA-ERAGAQKETPIVTPLMNFVRQKLAAKNGAQRLAGY 178
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LS+R G+ KR SEKRR TSMYVLRDS KN S K+ +TY+LM RR++Q
Sbjct: 179 GKLSKRAIGV---------IKRGSEKRRLSTSMYVLRDSRKNGSAKDKATYILMPRREEQ 229
Query: 951 QLSEKSVAVGAAT--EILEDEAVPAADFRTTTG---VSGAIDI-XXXXXXXXXXXXXXXX 1112
QL +KS+AV +A+ E LEDE DF T S A++
Sbjct: 230 QLPDKSIAVASASGAEALEDE----FDFPVTVSNGLTSRAVEAGKSKIVLLKGKEREGSH 285
Query: 1113 VSGVVSPQQSI--TVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQS 1286
SG + QQ++ TVR+S S + KQNQR E SGRIIR+ILSN+ QS +A+ Q
Sbjct: 286 ASGGLVQQQNVTTTVRSSPTSTS-KQNQRLE--ASGRIIRTILSNEG---RQSYMASSQP 339
Query: 1287 EQQMQTVNLEKDKRPPRPNNIRSILKDHVSPH---AVISDGDTKRASDDKFVANDLHNVT 1457
EQ M T NLEKDKRP RP + RSI KD VS A ISD KR DD + H
Sbjct: 340 EQHMHTTNLEKDKRPARPPSARSISKDRVSSSSSPASISDNGDKRYIDDMVAMSYKHGSV 399
Query: 1458 SVNEKQDRRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQA 1637
S+++K ++RTRNKDRPDRGVW PLRRSD S ++DG L SSS AQ L DS E +++SQQ
Sbjct: 400 SISDKHEKRTRNKDRPDRGVWAPLRRSDRSQSNDGTLSSSSEAAQILVDSLENVSMSQQ- 458
Query: 1638 AAGVSKTGDDVV----EDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMK 1805
AG+ D+VV D G E K
Sbjct: 459 TAGIKVADDNVVVWNAHDMPIGQG---------------------------------ERK 485
Query: 1806 ADMPNASKSGEIKVIGTGLV------NGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRG 1964
+D P+AS++ E+K G V NGSHRHV RRGP K+ + S + SE K SKRG
Sbjct: 486 SDTPSASRTEEMKSHGGARVGLSIVENGSHRHVGRRGPARASKDAESSLSISEVKHSKRG 545
Query: 1965 GTGYGSHEKQVWVQKSGSGS 2024
+GYGSHE+QVWVQKSGS S
Sbjct: 546 SSGYGSHERQVWVQKSGSAS 565
>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
vinifera]
Length = 514
Score = 533 bits (1373), Expect = e-148
Identities = 323/601 (53%), Positives = 379/601 (63%), Gaps = 4/601 (0%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK +DRTK V+RHLPP IS++A +EQID F RY FR G NSQK Q ++RAY+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GHVFVNEKG QFKTIVEYAPSQR PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
F++ LAKPVENLPSAEIQLER+EA ERAG K+T IVTPLMDFVRQKRAAK S+R +N
Sbjct: 121 FVELLAKPVENLPSAEIQLERREA-ERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G S GN S S+KR SEKRR T+MYVLRD+ K+TS K+ ST++L+ +RDDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 951 QLSEKSV--AVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
LS+KSV A G E LE+E +GVSGA+D
Sbjct: 240 LLSDKSVNLAAGGGAEALEEE----------SGVSGAVDAGKKKVLLLKGKERE------ 283
Query: 1125 VSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQT 1304
+S + V+N G+ A KQNQRRE SGRIIRSIL NKDAR +QSS+ Q+EQQ Q
Sbjct: 284 ISHNVTSPVKNILGANAPKQNQRREG--SGRIIRSILLNKDARQSQSSM--FQTEQQSQA 339
Query: 1305 VNLEKDKRPPRPNNIRSILKDHVSPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQDRR 1484
NLEK+KRPPRP PH ++ +T A DDK V ND+H+ V+EKQD+R
Sbjct: 340 SNLEKEKRPPRP------------PHIQLASKETNGAQDDKVVGNDVHSF--VSEKQDKR 385
Query: 1485 TRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKTGD 1664
TRNKDRPDRGVWTPLRRSDGSHASD L SSS SD EG ++ +++G+
Sbjct: 386 TRNKDRPDRGVWTPLRRSDGSHASDESL-SSSASQPTSSDFPEGSHGEMRSDMSNARSGE 444
Query: 1665 DVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGEIK 1844
V+ SG GG
Sbjct: 445 --VKALGSGR----GGH------------------------------------------- 455
Query: 1845 VIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGT-GYGSHEKQVWVQKSGS 2018
+ L NGSH+H RRGP H +K+ DGS SEGK SKRG GYGSHEKQVWVQKS S
Sbjct: 456 ---SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKSSS 512
Query: 2019 G 2021
G
Sbjct: 513 G 513
>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
product [Vitis vinifera]
Length = 519
Score = 533 bits (1372), Expect = e-148
Identities = 325/603 (53%), Positives = 382/603 (63%), Gaps = 6/603 (0%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK +DRTK V+RHLPP IS++A +EQID F RY FR G NSQK Q ++RAY+DF
Sbjct: 1 MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDVIEFA+FF GHVFVNEKG QFKTIVEYAPSQR PK W KKDGREGTIFKDPEY+E
Sbjct: 61 KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
F++ LAKPVENLPSAEIQLER+EA ERAG K+T IVTPLMDFVRQKRAAK S+R +N
Sbjct: 121 FVELLAKPVENLPSAEIQLERREA-ERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G S GN S S+KR SEKRR T+MYVLRD+ K+TS K+ ST++L+ +RDDQ
Sbjct: 180 GKLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQ 239
Query: 951 QLSEKSV--AVGAATEILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSGV 1124
LS+KSV A G E LE+E +GVSGA+D +
Sbjct: 240 LLSDKSVNLAAGGGAEALEEE----------SGVSGAVDAGKKKVLLLKGKEREISHHLL 289
Query: 1125 VSPQQSIT--VRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQM 1298
QQ++T V+N G+ A KQNQRRE SGRIIRSIL NKDAR +QSS+ Q+EQQ
Sbjct: 290 ---QQNVTSPVKNILGANAPKQNQRREG--SGRIIRSILLNKDARQSQSSM--FQTEQQS 342
Query: 1299 QTVNLEKDKRPPRPNNIRSILKDHVSPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQD 1478
Q NLEK+KRPPRP PH ++ +T A DDK V ND+H+ V+EKQD
Sbjct: 343 QASNLEKEKRPPRP------------PHIQLASKETNGAQDDKVVGNDVHSF--VSEKQD 388
Query: 1479 RRTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKT 1658
+RTRNKDRPDRGVWTPLRRSDGSHASD L SSS SD EG ++ +++
Sbjct: 389 KRTRNKDRPDRGVWTPLRRSDGSHASDESL-SSSASQPTSSDFPEGSHGEMRSDMSNARS 447
Query: 1659 GDDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGE 1838
G+ V+ SG GG
Sbjct: 448 GE--VKALGSGR----GGH----------------------------------------- 460
Query: 1839 IKVIGTGLVNGSHRHVVRRGP-HGLKEIDGSPNFSEGKPSKRGGT-GYGSHEKQVWVQKS 2012
+ L NGSH+H RRGP H +K+ DGS SEGK SKRG GYGSHEKQVWVQKS
Sbjct: 461 -----SALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEKQVWVQKS 515
Query: 2013 GSG 2021
SG
Sbjct: 516 SSG 518
>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
gi|557533707|gb|ESR44825.1| hypothetical protein
CICLE_v10000901mg [Citrus clementina]
Length = 514
Score = 530 bits (1364), Expect = e-147
Identities = 320/608 (52%), Positives = 385/608 (63%), Gaps = 10/608 (1%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK +DRTK V+R+LPP I+Q A EQID F RY W FR G SQK+Q ARAY+DF
Sbjct: 1 MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDV+EFA+FF GHVFVNEKG QFKTIVEYAPSQR PK WSKKDGREGT+ KDPEYLE
Sbjct: 61 KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ ++KPVENLPSAEIQLER+EA ERAG KE LIVTPLMDFVRQKRAAK G +R +N
Sbjct: 121 FLEFISKPVENLPSAEIQLERREA-ERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G S G+ +S S+KR S+K++A T+MYVLRD+ KN+SGK+ STY+L+ +RDDQ
Sbjct: 180 GKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQ 239
Query: 951 QLSEKSVAVGAAT---EILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSG 1121
+K V+ +AT +LE+ VPA + G + VSG
Sbjct: 240 DF-DKPVSSSSATGSEVVLEESGVPA----NSDGGKKKV------LLLKGKEREISQVSG 288
Query: 1122 VVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQ 1301
VS QQS +V+ S A KQNQRRE SGRIIR IL NKDAR NQ+S L SEQQ+
Sbjct: 289 SVSHQQSASVKTIISSPALKQNQRREN--SGRIIRGILLNKDARQNQAS--GLHSEQQIS 344
Query: 1302 TVNLEKDKRPPRPNNIRSILKDHVSPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQDR 1481
NLEKDKRPPRP++++ ++K DT SDDK + NDLH +EKQ+R
Sbjct: 345 --NLEKDKRPPRPSHVQLVMK------------DTNGVSDDKVIVNDLH-----SEKQER 385
Query: 1482 RTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKTG 1661
RTRNKDRPDR WT LRRSDGS+ SD L SS+ SQ + + V
Sbjct: 386 RTRNKDRPDRAAWT-LRRSDGSYQSDESLSSSA---------------SQLSLSAV---- 425
Query: 1662 DDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGEI 1841
D+ GN L + K D+ N +SGE+
Sbjct: 426 -----DSSEGN--------------------------------LGDGKFDLSN-MRSGEV 447
Query: 1842 KVIGTG------LVNGSHRHVVRRGPHGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQVW 2000
K +G G + NGSHRH+ RRGP +K+ DGSP SEGKP +RGG +GYGSHEKQVW
Sbjct: 448 KAVGGGRSSHSSVDNGSHRHIGRRGPTHVKD-DGSPVMSEGKPLRRGGASGYGSHEKQVW 506
Query: 2001 VQKSGSGS 2024
VQKS SGS
Sbjct: 507 VQKSSSGS 514
>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
sinensis]
Length = 514
Score = 529 bits (1363), Expect = e-147
Identities = 320/608 (52%), Positives = 384/608 (63%), Gaps = 10/608 (1%)
Frame = +3
Query: 231 MKDRIDRTKAVLRHLPPGISQSALMEQIDARFASRYRWFCFRAGNNSQKNQRHARAYIDF 410
MK +DRTK V+R+LPP I+Q A EQID F RY W FR G SQK+Q ARAY+DF
Sbjct: 1 MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60
Query: 411 NNPEDVIEFADFFTGHVFVNEKGAQFKTIVEYAPSQRAPKPWSKKDGREGTIFKDPEYLE 590
PEDV+EFA+FF GHVFVNEKG QFKTIVEYAPSQR PK WSKKDGREGT+ KDPEYLE
Sbjct: 61 KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120
Query: 591 FLDRLAKPVENLPSAEIQLERKEAEERAGGQKETLIVTPLMDFVRQKRAAKIGSQRQSTN 770
FL+ ++KPVENLPSAEIQLER+EA ERAG KE LIVTPLMDFVRQKRAAK G +R +N
Sbjct: 121 FLEFISKPVENLPSAEIQLERREA-ERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSN 179
Query: 771 GRLSRRGGGISPGNSSSASTKRASEKRRAPTSMYVLRDSTKNTSGKEGSTYLLMQRRDDQ 950
G+LSRR G S G+ +S S+KR S+K++A T+MYVLRD+ KN+SGK+ STY+L+ +RDDQ
Sbjct: 180 GKLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQ 239
Query: 951 QLSEKSVAVGAAT---EILEDEAVPAADFRTTTGVSGAIDIXXXXXXXXXXXXXXXXVSG 1121
+K V+ +AT +LE+ VPA + G + VSG
Sbjct: 240 DF-DKPVSSSSATGSEVVLEESGVPA----NSDGGKKKV------LLLKGKEREISQVSG 288
Query: 1122 VVSPQQSITVRNSQGSAAFKQNQRRERDVSGRIIRSILSNKDARHNQSSVATLQSEQQMQ 1301
VS QQS +V+N S A KQNQRRE SGRIIR IL NKDAR NQ+S L SEQQ+
Sbjct: 289 SVSHQQSASVKNIISSPALKQNQRREN--SGRIIRGILLNKDARQNQAS--GLHSEQQIS 344
Query: 1302 TVNLEKDKRPPRPNNIRSILKDHVSPHAVISDGDTKRASDDKFVANDLHNVTSVNEKQDR 1481
NLEKDKRPPRP+++ ++K DT SDDK + NDLH +EKQ+R
Sbjct: 345 --NLEKDKRPPRPSHVHLVMK------------DTNGVSDDKVIVNDLH-----SEKQER 385
Query: 1482 RTRNKDRPDRGVWTPLRRSDGSHASDGPLPSSSLHAQFLSDSFEGMTISQQAAAGVSKTG 1661
RTRNKDRPDR WT LRRSDGS+ SD L SS+ SQ + + V
Sbjct: 386 RTRNKDRPDRAAWT-LRRSDGSYQSDESLSSSA---------------SQLSLSAV---- 425
Query: 1662 DDVVEDTDSGNNSFTGGKPRSMDXXXXXXXXXXXXXXXANEFTLCEMKADMPNASKSGEI 1841
D+ GN L + K D+ N +SGE+
Sbjct: 426 -----DSSEGN--------------------------------LGDGKFDLSN-MRSGEV 447
Query: 1842 KVIGTG------LVNGSHRHVVRRGPHGLKEIDGSPNFSEGKPSKRGG-TGYGSHEKQVW 2000
K +G G + NGSHRH+ RRGP +K+ D SP SEGKP +RGG +GYGSHEKQVW
Sbjct: 448 KAVGGGRSSHSSVDNGSHRHIGRRGPTHVKD-DSSPVMSEGKPLRRGGASGYGSHEKQVW 506
Query: 2001 VQKSGSGS 2024
VQKS SGS
Sbjct: 507 VQKSSSGS 514