BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum23_contig00000607
         (2018 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X...   480   e-132
ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X...   480   e-132
ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X...   479   e-132
ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X...   479   e-132
ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X...   479   e-132
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...   471   e-129
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...   470   e-129
emb|CBI34953.3| unnamed protein product [Vitis vinifera]              466   e-128
gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]     461   e-126
ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X...   455   e-125
gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium r...   455   e-125
gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium r...   455   e-125
gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium r...   455   e-125
gb|KJB11467.1| hypothetical protein B456_001G260400 [Gossypium r...   455   e-125
gb|KJB11466.1| hypothetical protein B456_001G260400 [Gossypium r...   455   e-125

>ref|XP_010660946.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Vitis vinifera]
          Length = 1343

 Score =  480 bits (1235), Expect = e-132
 Identities = 284/569 (49%), Positives = 340/569 (59%), Gaps = 55/569 (9%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFD+RKYVETYFMKDIETELGL REK+ RMALLLGSDYTEG
Sbjct: 706  VVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEG 765

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEV+N+FPEEDGL KFREW+ESPDP+ILGK+N   G ++ KR  K  S   
Sbjct: 766  VSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQ 825

Query: 1658 DGLTNNVDGESAESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVISA 1479
                NN+D  + +  V  ++  +SVDD+   KQIFMDKHRNVSKNWHIPSSFPSE VISA
Sbjct: 826  SHSKNNMD--AFDENVSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISA 883

Query: 1478 YTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRLEA 1299
            Y SPQVD STEPFSWGKPDLFVLRKLC E+FGW NQKADELLLPVLKEY+KHETQLRLEA
Sbjct: 884  YASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEA 943

Query: 1298 FYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSGTASNISEK 1119
            FYTFNERFAKIRS+RIKKAVKGITG+Q SEL+D   Q  S+  K+ K  PS    N  E 
Sbjct: 944  FYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPS-KLDNKQEI 1002

Query: 1118 PCDEINGGDAGNEAKASEETARKQPRKKGTAKTESEDGHSL---------------VQKA 984
            P +EI    A N + A+ +T  KQ R++   K    DG S                  K 
Sbjct: 1003 PINEIGSTAARNGSNATAKTTPKQSRRRRIRKPVPSDGESAEPPVQAGQKQCNDTGSSKN 1062

Query: 983  GRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQS 804
            GR K R +                   +                + +E++V  ++    +
Sbjct: 1063 GRGKGRKKGRGVRRGRGRSRIQENPGSE------ISGTSSSDCNSGNEEEVPAQKLDGSN 1116

Query: 803  ELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSG--TLEQEPFTDRGITSDA----- 645
            E+RRS R RK V Y                 ++ C+    +E EP  D+ I  DA     
Sbjct: 1117 EVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFS 1176

Query: 644  ----------------CGP---------TDENQA-------NEPSLEGKSSRDYLYSGGG 561
                            CG           DEN+        ++P+   + S DYL  GGG
Sbjct: 1177 GKNQQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLDSRDDDPTFADEFSEDYLKMGGG 1236

Query: 560  FCADEDD-DQSGNPIQQVRSPARASDLFE 477
            FC +ED+ D+  N   +   PA+A  ++E
Sbjct: 1237 FCVEEDEKDKDHN--ARTYDPAKADTIYE 1263


>ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Vitis vinifera]
          Length = 1513

 Score =  480 bits (1235), Expect = e-132
 Identities = 284/569 (49%), Positives = 340/569 (59%), Gaps = 55/569 (9%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFD+RKYVETYFMKDIETELGL REK+ RMALLLGSDYTEG
Sbjct: 876  VVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEG 935

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEV+N+FPEEDGL KFREW+ESPDP+ILGK+N   G ++ KR  K  S   
Sbjct: 936  VSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKVGSGDQ 995

Query: 1658 DGLTNNVDGESAESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVISA 1479
                NN+D  + +  V  ++  +SVDD+   KQIFMDKHRNVSKNWHIPSSFPSE VISA
Sbjct: 996  SHSKNNMD--AFDENVSQNEHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISA 1053

Query: 1478 YTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRLEA 1299
            Y SPQVD STEPFSWGKPDLFVLRKLC E+FGW NQKADELLLPVLKEY+KHETQLRLEA
Sbjct: 1054 YASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEA 1113

Query: 1298 FYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSGTASNISEK 1119
            FYTFNERFAKIRS+RIKKAVKGITG+Q SEL+D   Q  S+  K+ K  PS    N  E 
Sbjct: 1114 FYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPS-KLDNKQEI 1172

Query: 1118 PCDEINGGDAGNEAKASEETARKQPRKKGTAKTESEDGHSL---------------VQKA 984
            P +EI    A N + A+ +T  KQ R++   K    DG S                  K 
Sbjct: 1173 PINEIGSTAARNGSNATAKTTPKQSRRRRIRKPVPSDGESAEPPVQAGQKQCNDTGSSKN 1232

Query: 983  GRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQS 804
            GR K R +                   +                + +E++V  ++    +
Sbjct: 1233 GRGKGRKKGRGVRRGRGRSRIQENPGSE------ISGTSSSDCNSGNEEEVPAQKLDGSN 1286

Query: 803  ELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSG--TLEQEPFTDRGITSDA----- 645
            E+RRS R RK V Y                 ++ C+    +E EP  D+ I  DA     
Sbjct: 1287 EVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFS 1346

Query: 644  ----------------CGP---------TDENQA-------NEPSLEGKSSRDYLYSGGG 561
                            CG           DEN+        ++P+   + S DYL  GGG
Sbjct: 1347 GKNQQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLDSRDDDPTFADEFSEDYLKMGGG 1406

Query: 560  FCADEDD-DQSGNPIQQVRSPARASDLFE 477
            FC +ED+ D+  N   +   PA+A  ++E
Sbjct: 1407 FCVEEDEKDKDHN--ARTYDPAKADTIYE 1433


>ref|XP_010271998.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Nelumbo nucifera]
          Length = 1430

 Score =  479 bits (1233), Expect = e-132
 Identities = 276/516 (53%), Positives = 331/516 (64%), Gaps = 23/516 (4%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGLTREKL  MALLLGSDYTEG
Sbjct: 795  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIHMALLLGSDYTEG 854

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            +SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSIL K +AH+  ++ K+ LK   N  
Sbjct: 855  ISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSILEKFDAHSESSSRKKLLKVNKNDV 914

Query: 1658 DGLTNNVDGESA--ESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVI 1485
            + L   V    A   SV  G +++QS+D++ +IKQIFM+KHRNVSKNWHIPSSFPSEMV+
Sbjct: 915  NYLEGRVQEGPAFDGSVPQGQNDRQSMDNIQNIKQIFMNKHRNVSKNWHIPSSFPSEMVV 974

Query: 1484 SAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRL 1305
            SAY SPQVD STEPFSWGKPDLF LRKLCWE+FGWSNQKADELLLPVLKEY+KHETQLRL
Sbjct: 975  SAYASPQVDKSTEPFSWGKPDLFALRKLCWEKFGWSNQKADELLLPVLKEYNKHETQLRL 1034

Query: 1304 EAFYTFNERFAKIRSQRIKKAVKGITGNQASELMD---HPSQVSSESR-------KKRKV 1155
            EAFYTFNERFAKIRSQRIK+AVKGITGN+ SEL D     S+V + SR       K+  +
Sbjct: 1035 EAFYTFNERFAKIRSQRIKRAVKGITGNRTSELDDLLCEASKVKNRSRVNPLPEEKRSNI 1094

Query: 1154 RPSGTASNISEKPCDEINGGDAGNEAKASEETARKQP----RKKGTAKTESED--GHSLV 993
              +G   + +E P          +++  SE T    P     KK T K    D  G    
Sbjct: 1095 SLNGNGDSSAELPSKWPRRRGTESKSAPSEVTNSAPPFQMDSKKSTKKRLKRDTGGRQKG 1154

Query: 992  QKAGRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAK 813
            + AGR + +  P                      H            +  E+++ +E+ +
Sbjct: 1155 KGAGRGRGKQAPN---------------------HDAIETSSTDSDNSWDEQEMQVEKTE 1193

Query: 812  EQSELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDE--NCSGTLEQEPFTDRGITSD-AC 642
                +RRS R +KQV+Y                  E      T+EQE   +  +  D A 
Sbjct: 1194 GLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAEENMFGDIAH 1253

Query: 641  GPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 540
            G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1254 GVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1289


>ref|XP_010271997.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Nelumbo nucifera]
          Length = 1264

 Score =  479 bits (1233), Expect = e-132
 Identities = 276/516 (53%), Positives = 331/516 (64%), Gaps = 23/516 (4%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGLTREKL  MALLLGSDYTEG
Sbjct: 629  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIHMALLLGSDYTEG 688

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            +SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSIL K +AH+  ++ K+ LK   N  
Sbjct: 689  ISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSILEKFDAHSESSSRKKLLKVNKNDV 748

Query: 1658 DGLTNNVDGESA--ESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVI 1485
            + L   V    A   SV  G +++QS+D++ +IKQIFM+KHRNVSKNWHIPSSFPSEMV+
Sbjct: 749  NYLEGRVQEGPAFDGSVPQGQNDRQSMDNIQNIKQIFMNKHRNVSKNWHIPSSFPSEMVV 808

Query: 1484 SAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRL 1305
            SAY SPQVD STEPFSWGKPDLF LRKLCWE+FGWSNQKADELLLPVLKEY+KHETQLRL
Sbjct: 809  SAYASPQVDKSTEPFSWGKPDLFALRKLCWEKFGWSNQKADELLLPVLKEYNKHETQLRL 868

Query: 1304 EAFYTFNERFAKIRSQRIKKAVKGITGNQASELMD---HPSQVSSESR-------KKRKV 1155
            EAFYTFNERFAKIRSQRIK+AVKGITGN+ SEL D     S+V + SR       K+  +
Sbjct: 869  EAFYTFNERFAKIRSQRIKRAVKGITGNRTSELDDLLCEASKVKNRSRVNPLPEEKRSNI 928

Query: 1154 RPSGTASNISEKPCDEINGGDAGNEAKASEETARKQP----RKKGTAKTESED--GHSLV 993
              +G   + +E P          +++  SE T    P     KK T K    D  G    
Sbjct: 929  SLNGNGDSSAELPSKWPRRRGTESKSAPSEVTNSAPPFQMDSKKSTKKRLKRDTGGRQKG 988

Query: 992  QKAGRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAK 813
            + AGR + +  P                      H            +  E+++ +E+ +
Sbjct: 989  KGAGRGRGKQAPN---------------------HDAIETSSTDSDNSWDEQEMQVEKTE 1027

Query: 812  EQSELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDE--NCSGTLEQEPFTDRGITSD-AC 642
                +RRS R +KQV+Y                  E      T+EQE   +  +  D A 
Sbjct: 1028 GLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAEENMFGDIAH 1087

Query: 641  GPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 540
            G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1088 GVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1123


>ref|XP_010271996.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Nelumbo nucifera]
          Length = 1571

 Score =  479 bits (1233), Expect = e-132
 Identities = 276/516 (53%), Positives = 331/516 (64%), Gaps = 23/516 (4%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGLTREKL  MALLLGSDYTEG
Sbjct: 936  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLTREKLIHMALLLGSDYTEG 995

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            +SGIGIVNAIEVV+AFPEEDGLQKF+EWLESPDPSIL K +AH+  ++ K+ LK   N  
Sbjct: 996  ISGIGIVNAIEVVHAFPEEDGLQKFKEWLESPDPSILEKFDAHSESSSRKKLLKVNKNDV 1055

Query: 1658 DGLTNNVDGESA--ESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVI 1485
            + L   V    A   SV  G +++QS+D++ +IKQIFM+KHRNVSKNWHIPSSFPSEMV+
Sbjct: 1056 NYLEGRVQEGPAFDGSVPQGQNDRQSMDNIQNIKQIFMNKHRNVSKNWHIPSSFPSEMVV 1115

Query: 1484 SAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRL 1305
            SAY SPQVD STEPFSWGKPDLF LRKLCWE+FGWSNQKADELLLPVLKEY+KHETQLRL
Sbjct: 1116 SAYASPQVDKSTEPFSWGKPDLFALRKLCWEKFGWSNQKADELLLPVLKEYNKHETQLRL 1175

Query: 1304 EAFYTFNERFAKIRSQRIKKAVKGITGNQASELMD---HPSQVSSESR-------KKRKV 1155
            EAFYTFNERFAKIRSQRIK+AVKGITGN+ SEL D     S+V + SR       K+  +
Sbjct: 1176 EAFYTFNERFAKIRSQRIKRAVKGITGNRTSELDDLLCEASKVKNRSRVNPLPEEKRSNI 1235

Query: 1154 RPSGTASNISEKPCDEINGGDAGNEAKASEETARKQP----RKKGTAKTESED--GHSLV 993
              +G   + +E P          +++  SE T    P     KK T K    D  G    
Sbjct: 1236 SLNGNGDSSAELPSKWPRRRGTESKSAPSEVTNSAPPFQMDSKKSTKKRLKRDTGGRQKG 1295

Query: 992  QKAGRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAK 813
            + AGR + +  P                      H            +  E+++ +E+ +
Sbjct: 1296 KGAGRGRGKQAPN---------------------HDAIETSSTDSDNSWDEQEMQVEKTE 1334

Query: 812  EQSELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDE--NCSGTLEQEPFTDRGITSD-AC 642
                +RRS R +KQV+Y                  E      T+EQE   +  +  D A 
Sbjct: 1335 GLPAVRRSTRLKKQVEYAVKDLEIDGLGESSERTREEFTTEETVEQETSAEENMFGDIAH 1394

Query: 641  GPTDENQANE--PSLEGKSSRDYLYSGGGFCADEDD 540
            G  + NQ ++  PSL+  S RDYL  GGGFC D+ +
Sbjct: 1395 GVEERNQCDQSNPSLKDGSCRDYLEMGGGFCMDKTE 1430


>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score =  471 bits (1212), Expect = e-129
 Identities = 273/520 (52%), Positives = 316/520 (60%), Gaps = 23/520 (4%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIE+ELGL REK+ RMALLLGSDYTEG
Sbjct: 939  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIESELGLNREKIIRMALLLGSDYTEG 998

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVV+AFPEEDGL+KF+EW+ESPDP+IL KL++H G ++  R  KA  + A
Sbjct: 999  VSGIGIVNAIEVVHAFPEEDGLKKFKEWIESPDPAILEKLDSHTGGSSRNRSSKASKDNA 1058

Query: 1658 DGLTNNVDGESAE-SVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVIS 1482
            DG+  NV   + E +V+G H +Q SV    DIK +FM KHRNVSKNWHIP SFPSE VI+
Sbjct: 1059 DGMRKNVGLSTIEETVLGSHVDQPSVSGTQDIKDVFMSKHRNVSKNWHIPPSFPSESVIT 1118

Query: 1481 AYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRLE 1302
            AY SPQVD STEPFSWGKPDL +LR+LCWERFGW NQKADELL+PVLKEY+KHETQLRLE
Sbjct: 1119 AYISPQVDESTEPFSWGKPDLVLLRRLCWERFGWGNQKADELLIPVLKEYNKHETQLRLE 1178

Query: 1301 AFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSGTASNISE 1122
            AFYTFNERFAKIRSQRIKKA+KGITG  +S+L D   Q  S SRKKR++ PS    + S+
Sbjct: 1179 AFYTFNERFAKIRSQRIKKALKGITGTCSSDLTDDRVQEGSSSRKKRRLSPSIPEGSASD 1238

Query: 1121 KPCDEINGGDAGNEAKASEETARKQPRKKGT---------AKTES----EDGHS------ 999
                     +  N          K PRK+ T           TES    E G S      
Sbjct: 1239 ---------NCSNAKIKQGRQVSKHPRKQNTESKNMHPADVATESVFLDESGRSNQSGLC 1289

Query: 998  -LVQKAGRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIE 822
              V+ +G+ K R                     D                     + H E
Sbjct: 1290 ENVRGSGKGKGRGRGRGRGRGISEEMLNHEPGDDTA--------------CTGASESHTE 1335

Query: 821  RAKEQSELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDAC 642
                +SE+RRS R RK VKY                 DEN    L +     +    D  
Sbjct: 1336 VPAAKSEVRRSKRPRKHVKYAEDVLEVDELNVSSNQMDEN---DLHEVAVEHKLAEEDGN 1392

Query: 641  GPTDEN--QANEPSLEGKSSRDYLYSGGGFCADEDDDQSG 528
            G   ++         E   SRDYL  GGGFCAD  D+Q G
Sbjct: 1393 GTIRDSIPDIGGSHSEDSLSRDYLLRGGGFCADRSDEQGG 1432


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score =  470 bits (1209), Expect = e-129
 Identities = 282/633 (44%), Positives = 358/633 (56%), Gaps = 46/633 (7%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE E+GLTREKL RMALLLGSDYTEG
Sbjct: 1039 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMRMALLLGSDYTEG 1098

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K      
Sbjct: 1099 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSARKRGSKFSDKDV 1158

Query: 1658 DGLTNN-------VDGESA--ESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSS 1506
                 +       ++G S+  +++       QS D + DIKQIFMDKHRNVSKNWHIPSS
Sbjct: 1159 ISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKHRNVSKNWHIPSS 1218

Query: 1505 FPSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSK 1326
            FPSE VIS Y SPQVD STEPF+WG+PDLFVLRKLCW++FGW +QK+D+LLLPVL+EY K
Sbjct: 1219 FPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSDDLLLPVLREYEK 1278

Query: 1325 HETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPS 1146
             ETQLRLEAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SRK+R+V P 
Sbjct: 1279 RETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQVSKSRKRRRVSPV 1338

Query: 1145 GTASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTAKTESEDGHSLVQKAGRPKAR 966
             +  + S +P +      +  ++K+ E++  K  RK+    +  +       +A R +  
Sbjct: 1339 KSGDDKSGEPSNWKEDIVSQRQSKSMEKSVPKPSRKRPPQTSPGKSTPEQPPRAARRRKT 1398

Query: 965  NEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELRRSA 786
            N+                  + +                N  ++V  E+     ++RRS 
Sbjct: 1399 NKQSPGIGRRKGHGARRRRRKASPDFEQSETSSSGGNSGNDYQEVDGEKLDRPQQVRRSM 1458

Query: 785  RQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQE------------------------ 678
            R R  V Y                 + +C   +EQE                        
Sbjct: 1459 RTRNPVNYN---VNDLEDEVGLSNKESSCEEAMEQEAADDLNEENPSEARDPTFEEDFSR 1515

Query: 677  PFTDRG----ITSDACGPTDENQANEPSLEGKSSRDYLYSGGGFCADEDDDQSGNPIQQV 510
             + +RG    +     G  DE+Q  +P+ E ++S+DYL  GGGFC DE++          
Sbjct: 1516 DYLERGGGFCMDEKEVGHPDESQGVDPTPEAEASKDYLKMGGGFCIDENETSKDPDAACD 1575

Query: 509  RSPARASDLFEAQRIDSPVTRSSTDAHFSVNSSTNLNEQKQENMLE---------QQDDS 357
            + P  A+D             ++  A  S +   +L+  +  +  E          +DDS
Sbjct: 1576 QDPVAATDSSNGVAFTDKADDNAASAEPSSSPKRSLDGLQNASFTELNLGHQNAANEDDS 1635

Query: 356  SKIPQMPPPSMIEERDSCTSGAVEVGLRAMPSL 258
                   PP      D+ T  A   GL AMP+L
Sbjct: 1636 K---GSAPPQETTVNDTVT--AFVGGLSAMPTL 1663


>emb|CBI34953.3| unnamed protein product [Vitis vinifera]
          Length = 1449

 Score =  466 bits (1198), Expect = e-128
 Identities = 279/569 (49%), Positives = 330/569 (57%), Gaps = 55/569 (9%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFD+RKYVETYFMKDIETELGL REK+ RMALLLGSDYTEG
Sbjct: 836  VVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSDYTEG 895

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEV+N+FPEEDGL KFREW+ESPDP+ILGK+N   G ++ KR         
Sbjct: 896  VSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKR--------- 946

Query: 1658 DGLTNNVDGESAESVVGGHDEQQSVDDLPDIKQIFMDKHRNVSKNWHIPSSFPSEMVISA 1479
                             G    +SVDD+   KQIFMDKHRNVSKNWHIPSSFPSE VISA
Sbjct: 947  -----------------GSKHNESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISA 989

Query: 1478 YTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKHETQLRLEA 1299
            Y SPQVD STEPFSWGKPDLFVLRKLC E+FGW NQKADELLLPVLKEY+KHETQLRLEA
Sbjct: 990  YASPQVDQSTEPFSWGKPDLFVLRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEA 1049

Query: 1298 FYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSGTASNISEK 1119
            FYTFNERFAKIRS+RIKKAVKGITG+Q SEL+D   Q  S+  K+ K  PS    N  E 
Sbjct: 1050 FYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKESPS-KLDNKQEI 1108

Query: 1118 PCDEINGGDAGNEAKASEETARKQPRKKGTAKTESEDGHSL---------------VQKA 984
            P +EI    A N + A+ +T  KQ R++   K    DG S                  K 
Sbjct: 1109 PINEIGSTAARNGSNATAKTTPKQSRRRRIRKPVPSDGESAEPPVQAGQKQCNDTGSSKN 1168

Query: 983  GRPKARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQS 804
            GR K R +                   +                + +E++V  ++    +
Sbjct: 1169 GRGKGRKKGRGVRRGRGRSRIQENPGSE------ISGTSSSDCNSGNEEEVPAQKLDGSN 1222

Query: 803  ELRRSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSG--TLEQEPFTDRGITSDA----- 645
            E+RRS R RK V Y                 ++ C+    +E EP  D+ I  DA     
Sbjct: 1223 EVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQIICGDAAADFS 1282

Query: 644  ----------------CGP---------TDENQA-------NEPSLEGKSSRDYLYSGGG 561
                            CG           DEN+        ++P+   + S DYL  GGG
Sbjct: 1283 GKNQQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLDSRDDDPTFADEFSEDYLKMGGG 1342

Query: 560  FCADEDD-DQSGNPIQQVRSPARASDLFE 477
            FC +ED+ D+  N   +   PA+A  ++E
Sbjct: 1343 FCVEEDEKDKDHN--ARTYDPAKADTIYE 1369


>gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]
          Length = 1697

 Score =  461 bits (1186), Expect = e-126
 Identities = 260/506 (51%), Positives = 317/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1029 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1088

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KF+EW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1089 VSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDPTILGKLNVQEGSSAWKRGPKSTEKDV 1148

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +    +  G  + +     D+         QS D + DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1149 NSTKTSTGGSESNNGASSLDQNSFQADKNMQSTDCINDIKQIFMDKHRNVSKNWHIPSSF 1208

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+EY K 
Sbjct: 1209 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLREYEKR 1268

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q +S+SR KR+V P  
Sbjct: 1269 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQASKSRNKRRVSPVQ 1328

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+  +      E       ++   R 
Sbjct: 1329 SGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSRKRQNSGKDVSFEMRTPEPQLRTLRRR 1388

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            K   +                                     N  ++V  E+  +  E+R
Sbjct: 1389 KTNKQSAGNGRGRGGGEGRRRKGSSG--FQQFETSSSGGDSGNDNQEVDGEKLDQPREVR 1446

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS R R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1447 RSMRTRNPVNYT-------------VNDLEDEGGLSHKESSGEDAMEKEAVEDVKEKIQC 1493

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1494 EAREPSLDNIDG-DYLETGGGFCMDE 1518


>ref|XP_012444069.1| PREDICTED: DNA repair protein UVH3 isoform X6 [Gossypium raimondii]
          Length = 1401

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 733  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 792

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 793  VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 852

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 853  NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 912

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 913  PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 972

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 973  ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1032

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1033 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1092

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1093 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1150

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1151 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1197

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1198 EAREPSLDNIYG-DYLETGGGFCMDE 1222


>ref|XP_012444060.1| PREDICTED: DNA repair protein UVH3 isoform X5 [Gossypium raimondii]
          Length = 1440

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 772  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 831

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 832  VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 891

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 892  NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 951

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 952  PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1011

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1012 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1071

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1072 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1131

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1132 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1189

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1190 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1236

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1237 EAREPSLDNIYG-DYLETGGGFCMDE 1261


>ref|XP_012444053.1| PREDICTED: DNA repair protein UVH3 isoform X4 [Gossypium raimondii]
          Length = 1591

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 923  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 982

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 983  VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1042

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1043 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1102

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1103 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1162

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1163 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1222

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1223 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1282

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1283 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1340

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1341 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1387

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1388 EAREPSLDNIYG-DYLETGGGFCMDE 1412


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1038 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1097

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1098 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1157

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1158 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1217

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1218 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1277

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1278 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1337

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1338 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1397

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1398 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1455

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1456 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1502

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1503 EAREPSLDNIYG-DYLETGGGFCMDE 1527


>ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1039 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1098

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1099 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1158

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1159 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1218

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1219 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1278

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1279 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1338

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1339 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1398

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1399 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1456

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1457 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1503

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1504 EAREPSLDNIYG-DYLETGGGFCMDE 1528


>ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Gossypium raimondii]
          Length = 1710

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1042 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1101

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1102 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1161

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1162 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1221

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1222 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1281

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1282 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1341

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1342 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1401

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1402 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1459

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1460 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1506

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1507 EAREPSLDNIYG-DYLETGGGFCMDE 1531


>gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1635

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1001 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1060

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1061 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1120

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1121 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1180

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1181 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1240

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1241 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1300

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1301 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1360

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1361 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1418

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1419 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1465

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1466 EAREPSLDNIYG-DYLETGGGFCMDE 1490


>gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1696

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1028 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1087

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1088 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1147

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1148 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1207

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1208 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1267

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1268 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1327

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1328 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1387

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1388 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1445

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1446 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1492

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1493 EAREPSLDNIYG-DYLETGGGFCMDE 1517


>gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1700

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1032 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1091

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1092 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1151

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1152 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1211

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1212 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1271

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1272 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1331

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1332 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1391

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1392 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1449

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1450 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1496

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1497 EAREPSLDNIYG-DYLETGGGFCMDE 1521


>gb|KJB11467.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1666

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 998  VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1057

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1058 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1117

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1118 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1177

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1178 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1237

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1238 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1297

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1298 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1357

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1358 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1415

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1416 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1462

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1463 EAREPSLDNIYG-DYLETGGGFCMDE 1487


>gb|KJB11466.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1669

 Score =  455 bits (1170), Expect = e-125
 Identities = 260/506 (51%), Positives = 314/506 (62%), Gaps = 15/506 (2%)
 Frame = -1

Query: 2018 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIETELGLTREKLTRMALLLGSDYTEG 1839
            VVTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIE ELGLTREKL RMALLLGSDYTEG
Sbjct: 1001 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEG 1060

Query: 1838 VSGIGIVNAIEVVNAFPEEDGLQKFREWLESPDPSILGKLNAHAGHNAGKRKLKACSNGA 1659
            VSGIGIVNAIEVVNAFPEEDGL KFREW+ESPDP+ILGKLN   G +A KR  K+     
Sbjct: 1061 VSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDV 1120

Query: 1658 DGLTNNVDGESAESVVGGHDEQ--------QSVDDLPDIKQIFMDKHRNVSKNWHIPSSF 1503
            +G   +  G  + +     D+         QS D   DIKQIFMDKHRNVSKNWHIPSSF
Sbjct: 1121 NGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSF 1180

Query: 1502 PSEMVISAYTSPQVDNSTEPFSWGKPDLFVLRKLCWERFGWSNQKADELLLPVLKEYSKH 1323
            PSE VISAY+ PQVD STEPF+WG+PDLFVLRKLCWE+FGW +QK+DELLLPVL+E  K 
Sbjct: 1181 PSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKR 1240

Query: 1322 ETQLRLEAFYTFNERFAKIRSQRIKKAVKGITGNQASELMDHPSQVSSESRKKRKVRPSG 1143
            ETQLR+EAFYTFNERFAKIRS+RIKKAVKGITGNQ+SEL+D   Q  S+SR+KR+  P  
Sbjct: 1241 ETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQ 1300

Query: 1142 TASNISEKPCDEINGGDAGNEAKASEETARKQPRKKGTA----KTESEDGHSLVQKAGRP 975
            +  + S +P ++     +  ++K+++++  K  RK+ ++      E       +Q   R 
Sbjct: 1301 SGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRR 1360

Query: 974  KARNEPXXXXXXXXXXXXXXXXXRDAVIHXXXXXXXXXXXXTNSEKQVHIERAKEQSELR 795
            +   +                                     N E  V  E+  +  E+R
Sbjct: 1361 ETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQE--VDGEKLDQPREVR 1418

Query: 794  RSARQRKQVKYTXXXXXXXXXXXXXXXXDENCSGTLEQEPFTDRGITSDACGPTDEN--- 624
            RS   R  V YT                 E+  G   +E   +  +  +A     E    
Sbjct: 1419 RSMHTRNPVNYT-------------VKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQC 1465

Query: 623  QANEPSLEGKSSRDYLYSGGGFCADE 546
            +A EPSL+     DYL +GGGFC DE
Sbjct: 1466 EAREPSLDNIYG-DYLETGGGFCMDE 1490