BLASTX nr result
ID: Cimicifuga21_contig00041452
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00041452
(301 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29194.3| unnamed protein product [Vitis vinifera] 129 3e-28
ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containi... 123 1e-26
ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containi... 120 9e-26
gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays] 119 3e-25
>emb|CBI29194.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 129 bits (323), Expect = 3e-28
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
DS+ L +VISACG+L+L+ G LHG LKTLM SD+RV+N+LITMY RC +IE+A ++F
Sbjct: 500 DSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF 559
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEYEP 301
NLCSWNCMIS F+QNK+GRRALELF +E+EP
Sbjct: 560 GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFEP 597
Score = 75.9 bits (185), Expect = 3e-12
Identities = 33/95 (34%), Positives = 60/95 (63%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
P+ IT+V ++SAC L ++ +G+ +HG +++ + + V +L MYS C +++A +
Sbjct: 597 PNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQI 656
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRL 289
F + P ++ +WN MIS F + NG +A+ELFH +
Sbjct: 657 FQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM 691
Score = 73.2 bits (178), Expect = 2e-11
Identities = 36/96 (37%), Positives = 59/96 (61%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
DS TL+ V+SA + ++ GR LHG + KT + SD + N+LI MY++C ++ S+ VF
Sbjct: 113 DSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVF 172
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEY 295
+ Y ++ SWN M+ G A N +++L F ++ Y
Sbjct: 173 GGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAY 208
Score = 66.2 bits (160), Expect = 3e-09
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVR---VRNSLITMYSRCEDIESAS 178
D+++L +SA L +S G+ +HG+ +K L D+ NSLI++YS+C DI++A
Sbjct: 214 DNVSLTCAVSASALLGELSFGQVIHGWGIK-LGYKDISHNSFENSLISLYSQCRDIQAAE 272
Query: 179 LVFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLE 292
++F + Y ++ SWN M+ G A N+ A +L H ++
Sbjct: 273 ILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQ 310
Score = 65.1 bits (157), Expect = 6e-09
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESA 175
PDS+T+V +I C +L L+ GR +HG TL+ MG D V NSLI MYS+C+D++ A
Sbjct: 317 PDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRA 373
>ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 129 bits (323), Expect = 3e-28
Identities = 61/98 (62%), Positives = 77/98 (78%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
DS+ L +VISACG+L+L+ G LHG LKTLM SD+RV+N+LITMY RC +IE+A ++F
Sbjct: 481 DSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALITMYGRCGEIENARIIF 540
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEYEP 301
NLCSWNCMIS F+QNK+GRRALELF +E+EP
Sbjct: 541 GFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFEP 578
Score = 101 bits (252), Expect = 6e-20
Identities = 48/95 (50%), Positives = 64/95 (67%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
PDS+T+V +I C +L L+ GR +HG TL+ MG D V NSLI MYS+C+D++ A V
Sbjct: 276 PDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHV 335
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRL 289
F IP +L SWN MISG++QN + R A LF +L
Sbjct: 336 FKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQL 370
Score = 75.9 bits (185), Expect = 3e-12
Identities = 33/95 (34%), Positives = 60/95 (63%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
P+ IT+V ++SAC L ++ +G+ +HG +++ + + V +L MYS C +++A +
Sbjct: 578 PNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQI 637
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRL 289
F + P ++ +WN MIS F + NG +A+ELFH +
Sbjct: 638 FQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEM 672
Score = 73.2 bits (178), Expect = 2e-11
Identities = 36/96 (37%), Positives = 59/96 (61%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
DS TL+ V+SA + ++ GR LHG + KT + SD + N+LI MY++C ++ S+ VF
Sbjct: 72 DSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVF 131
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEY 295
+ Y ++ SWN M+ G A N +++L F ++ Y
Sbjct: 132 GGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAY 167
Score = 66.2 bits (160), Expect = 3e-09
Identities = 34/98 (34%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVR---VRNSLITMYSRCEDIESAS 178
D+++L +SA L +S G+ +HG+ +K L D+ NSLI++YS+C DI++A
Sbjct: 173 DNVSLTCAVSASALLGELSFGQVIHGWGIK-LGYKDISHNSFENSLISLYSQCRDIQAAE 231
Query: 179 LVFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLE 292
++F + Y ++ SWN M+ G A N+ A +L H ++
Sbjct: 232 ILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQ 269
>ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 123 bits (309), Expect = 1e-26
Identities = 59/100 (59%), Positives = 73/100 (73%)
Frame = +2
Query: 2 NPDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASL 181
N DSITLVS +SAC +L+L + G+ LHG T+K+ +GSD RV+NSLITMY RC DI SA +
Sbjct: 599 NYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDINSAKV 658
Query: 182 VFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEYEP 301
VF NLCSWNCMIS + N+ R ALELF L++EP
Sbjct: 659 VFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQFEP 698
Score = 79.0 bits (193), Expect = 4e-13
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSD-VRVRNSLITMYSRCEDIESASL 181
PD +TL++++ C +L L GR +HG+ ++ M SD V + NSLI MYS+C +E A L
Sbjct: 393 PDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAEL 452
Query: 182 VFTTIPYHNLCSWNCMISGFAQNKNGRRALELF 280
+F + + SWN MISG++ N+ A LF
Sbjct: 453 LFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLF 485
Score = 71.6 bits (174), Expect = 6e-11
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
D+++L ISA L +S G+ +HG +K S V V NSLI++YS+CEDI++A +F
Sbjct: 292 DNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLYSQCEDIKAAETLF 351
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLE 292
I ++ SWN M+ GFA N + +L +++
Sbjct: 352 REIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQ 386
Score = 64.3 bits (155), Expect = 1e-08
Identities = 28/95 (29%), Positives = 55/95 (57%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
P+ IT++ V+SAC + ++ +G+ +H +T + + + +LI +YS C +++A V
Sbjct: 698 PNEITIIGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQV 757
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRL 289
F + +WN MIS + + G +A++LFH +
Sbjct: 758 FRHAKEKSESAWNSMISAYGYHGKGEKAIKLFHEM 792
Score = 61.6 bits (148), Expect = 6e-08
Identities = 29/96 (30%), Positives = 56/96 (58%)
Frame = +2
Query: 8 DSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLVF 187
DS TL+ ++SA ++ GR +H ++K+ M D+ + N+L+ MY++C D+ S+ ++
Sbjct: 191 DSTTLLLIVSASLHMKNFDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLY 250
Query: 188 TTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLEY 295
I + SWN ++ G N++ +AL F R+ +
Sbjct: 251 EEIECKDAVSWNSIMRGSLYNRHPEKALCYFKRMSF 286
>ref|XP_003567454.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Brachypodium distachyon]
Length = 924
Score = 120 bits (302), Expect = 9e-26
Identities = 56/97 (57%), Positives = 75/97 (77%)
Frame = +2
Query: 2 NPDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASL 181
NPDSITLVSV+SACG L+L S G+ +H LK L+ ++RV+N+L+TMY R D ESA L
Sbjct: 577 NPDSITLVSVLSACGTLKLQSLGKSIHSMALKRLLVFNLRVKNALLTMYFRFADTESAEL 636
Query: 182 VFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLE 292
+F ++ NLCSWNCM+SGFAQN +GRRAL+ + ++E
Sbjct: 637 IFYSLGDRNLCSWNCMVSGFAQNNDGRRALQFYQKME 673
Score = 76.6 bits (187), Expect = 2e-12
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGF-TLKTLMGSDVRVRNSLITMYSRCEDIESASL 181
PD TLV+VI +CGD L+ G+ +HG+ T K L + + NSL+ +Y +C+D +A+L
Sbjct: 372 PDFATLVAVILSCGDQGLLCEGKAIHGYITRKCLFHVESSLGNSLLGLYMKCDDAYTANL 431
Query: 182 VFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHR 286
+F T+P +L SWN M+SG++++ + R + R
Sbjct: 432 LFRTMPIRDLISWNTMLSGYSRDDSLREEAQAMFR 466
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
P+ + VS+I AC L+ V +G+ +HG +K+ + ++V + SL+ MYS+C ++ A V
Sbjct: 677 PNEMCTVSIICACTQLRDVRHGKSIHGHVVKSDLQNNVFLSASLVDMYSKCGRLDIAVRV 736
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELF 280
F + ++ WN MIS F + +G R++ELF
Sbjct: 737 FESSTEKSIACWNSMISAFGFHGHGLRSIELF 768
>gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
Length = 917
Score = 119 bits (298), Expect = 3e-25
Identities = 59/101 (58%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 NPDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASL 181
NPDSIT+VSV+SACGDL L++ G+ +H LK L S++RV+NSL+TMY R D SA L
Sbjct: 571 NPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFGDTRSAEL 630
Query: 182 VFTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRLE-YEP 301
VF ++ NLCSWNCMISGFAQN G RAL+ + ++E +EP
Sbjct: 631 VFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKMEDFEP 671
Score = 74.7 bits (182), Expect = 7e-12
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTL-KTLMGSDVRVRNSLITMYSRCEDIESASL 181
PD TLV+++S C D L+S G LHG+ + K L+ + + NSL+ +Y +C++ +A L
Sbjct: 365 PDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGL 424
Query: 182 VFTTIPYHNLCSWNCMISGFAQ 247
+F T+P +L SWN MISG+++
Sbjct: 425 LFMTMPRRDLISWNTMISGYSR 446
Score = 61.6 bits (148), Expect = 6e-08
Identities = 27/95 (28%), Positives = 55/95 (57%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQLVSNGRFLHGFTLKTLMGSDVRVRNSLITMYSRCEDIESASLV 184
P+ I++V +I AC L G+ +HG ++++ ++V + SL+ MY +C ++ A V
Sbjct: 671 PNEISVVGIICACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRV 730
Query: 185 FTTIPYHNLCSWNCMISGFAQNKNGRRALELFHRL 289
F ++ WN +IS F + +G ++++LF ++
Sbjct: 731 FEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKM 765
Score = 59.3 bits (142), Expect = 3e-07
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Frame = +2
Query: 5 PDSITLVSVISACGDLQ-LVSNGRFLHGFTLKTLMG----SDVRVRNSLITMYSRCEDIE 169
PD ++L SV+SAC L L S G +H +K +G + V NSL+T YS E
Sbjct: 262 PDEVSLSSVLSACSRLDDLFSFGESVHSCAVK--LGYEDTASCSVANSLVTFYSEFGMPE 319
Query: 170 SASLVFTTIPYHNLCSWNCMISGFAQNKNGRRALELFH--RLEYEP 301
+A VF + NL SWN MI G QN+ AL + RLE +P
Sbjct: 320 AAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLENQP 365
Score = 58.2 bits (139), Expect = 7e-07
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 17 TLVSVISACGDLQLVSNGRFLHGFTLKT-LMGSDVRVRNSLITMYSRCED-IESASLVFT 190
T+++VI +C + +S G+ LH F+LK S V N+LI MY C D + + SL+
Sbjct: 472 TMLAVIPSCSIPEELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIER 531
Query: 191 TIPYHNLCSWNCMISGFAQNKNGRRALELF 280
IP ++ SWN +I G QN+ + ALE+F
Sbjct: 532 IIPVSDIISWNTVIVGCLQNELHKDALEIF 561