BLASTX nr result

ID: Cimicifuga21_contig00041437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041437
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              144   1e-32
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   141   6e-32
ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/103 (72%), Positives = 82/103 (79%)
 Frame = -2

Query: 309 FNAIICAYTKESQIHIAHQLFDQIPQPDLVSRNTLISGYADLGETVGAFLLFSQMRNTGH 130
           FNAII AY KES+  IAHQLFDQIP+PDLVS NTLIS YAD GET  A  LFS MR  G 
Sbjct: 77  FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136

Query: 129 DMDGFTLSSVLTASSDDVGLIKQVHSLTVSAGFDGYVSVGNAL 1
           DMDGFTLS+V+TA  DDVGLI Q+HS+ VS+GFD YVSV NAL
Sbjct: 137 DMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNAL 179


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  144 bits (362), Expect = 1e-32
 Identities = 75/103 (72%), Positives = 82/103 (79%)
 Frame = -2

Query: 309 FNAIICAYTKESQIHIAHQLFDQIPQPDLVSRNTLISGYADLGETVGAFLLFSQMRNTGH 130
           FNAII AY KES+  IAHQLFDQIP+PDLVS NTLIS YAD GET  A  LFS MR  G 
Sbjct: 77  FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136

Query: 129 DMDGFTLSSVLTASSDDVGLIKQVHSLTVSAGFDGYVSVGNAL 1
           DMDGFTLS+V+TA  DDVGLI Q+HS+ VS+GFD YVSV NAL
Sbjct: 137 DMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNAL 179


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  141 bits (355), Expect = 6e-32
 Identities = 74/103 (71%), Positives = 81/103 (78%)
 Frame = -2

Query: 309 FNAIICAYTKESQIHIAHQLFDQIPQPDLVSRNTLISGYADLGETVGAFLLFSQMRNTGH 130
           FNAII AY KES+  IAHQLFDQIP+PDLVS NTLIS YAD GET  A  LFS MR  G 
Sbjct: 77  FNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136

Query: 129 DMDGFTLSSVLTASSDDVGLIKQVHSLTVSAGFDGYVSVGNAL 1
           DMD FTLS+V+TA  DDVGLI Q+HS+ VS+GFD YVSV NAL
Sbjct: 137 DMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNAL 179


>ref|XP_003635488.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 358

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/103 (71%), Positives = 79/103 (76%)
 Frame = -2

Query: 309 FNAIICAYTKESQIHIAHQLFDQIPQPDLVSRNTLISGYADLGETVGAFLLFSQMRNTGH 130
           FNAII AY KES   IAHQLFDQIP PDLVS NTLIS YAD GET  A  LFS MR  G 
Sbjct: 77  FNAIIAAYAKESPPLIAHQLFDQIPVPDLVSYNTLISAYADCGETAPALGLFSGMREMGL 136

Query: 129 DMDGFTLSSVLTASSDDVGLIKQVHSLTVSAGFDGYVSVGNAL 1
           DMDGFTLS+V+TA  DDVGLI Q+HS+ VS+GFD YVSV N L
Sbjct: 137 DMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVNNVL 179


>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/103 (65%), Positives = 79/103 (76%)
 Frame = -2

Query: 309 FNAIICAYTKESQIHIAHQLFDQIPQPDLVSRNTLISGYADLGETVGAFLLFSQMRNTGH 130
           FNA+I AY KES IH+AH LFDQIPQPDLVS NTLI+ YAD G+T+ A  LF +MR  G 
Sbjct: 77  FNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGL 136

Query: 129 DMDGFTLSSVLTASSDDVGLIKQVHSLTVSAGFDGYVSVGNAL 1
            MDGFT S V+TA  + VGLI+Q+HSL  S+GFD YVSV N+L
Sbjct: 137 VMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSL 179


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