BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041390
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  40   3e-07
ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus c...    44   8e-07

>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 40.0 bits (92), Expect(2) = 3e-07
 Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
 Frame = +3

Query: 150 FEYKALS-GSKYGSLVATNYWYAEIWWD----ERQLVGHEPIRS*RDMKEALEKEFIPKT 314
           FE+K  S G  +   +     YA +W++    +R+  G EPI+S   +K+ L ++FIPK 
Sbjct: 115 FEFKGYSDGKAFKVAILKLKGYASLWYENLKNQRRRDGKEPIKSWLKLKKKLNEKFIPKE 174

Query: 315 YKRDL 329
           Y +D+
Sbjct: 175 YTQDI 179



 Score = 38.9 bits (89), Expect(2) = 3e-07
 Identities = 11/36 (30%), Positives = 25/36 (69%)
 Frame = +1

Query: 67  DIKIDVPEFNGKMDPDTFVDWLNKIKKILSTKHFLD 174
           D+K+++P+F+G ++P+  +DW   I+++   K + D
Sbjct: 87  DLKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSD 122


>ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus communis]
           gi|223533034|gb|EEF34796.1| hypothetical protein
           RCOM_1568080 [Ricinus communis]
          Length = 136

 Score = 43.5 bits (101), Expect(2) = 8e-07
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
 Frame = +3

Query: 150 FEYKALSGSKYGSLVATNYW-YAEIWWD----ERQLVGHEPIRS*RDMKEALEKEFIPKT 314
           FE    S  K   L A  +  YA +WWD    ER+  G  P+ S  +MK+ + K FIP  
Sbjct: 43  FECHNYSEEKKVKLAAVEFSDYAIVWWDQFCKERRRYGERPVESWIEMKQIMRKRFIPSH 102

Query: 315 YKRDLLDR 338
           Y R+L  R
Sbjct: 103 YYRELHQR 110



 Score = 34.3 bits (77), Expect(2) = 8e-07
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 70  IKIDVPEFNGKMDPDTFVDWLNKIKKILSTKHF 168
           IK+ +P F G+ DPD +++W  K++ I    ++
Sbjct: 16  IKMKIPSFQGRNDPDVYLEWERKVELIFECHNY 48