BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041368
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17926.3| unnamed protein product [Vitis vinifera]              120   2e-25
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]   119   2e-25
ref|XP_002532374.1| basic helix-loop-helix-containing protein, p...    81   1e-13
ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ...    80   2e-13
ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13

>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = -3

Query: 298 GIMPDLMALATIISACTLLGNLNIAKTMHGFISKASVEIDDFVCSALLGMYGDSGSLDYA 119
           G+ PD++A++T++SAC LLG+L +AK MH FI K+ +E+D FV S L+  YG+ GSLDYA
Sbjct: 187 GLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYA 246

Query: 118 RCLFWEIYAKNIVVWNTMIHQCVKHESLDEARELFKKMP 2
              F E   KNIVVWNTMIHQ V+H +L+  ++LF+ MP
Sbjct: 247 YRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285


>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
          Length = 602

 Score =  119 bits (299), Expect = 2e-25
 Identities = 54/99 (54%), Positives = 74/99 (74%)
 Frame = -3

Query: 298 GIMPDLMALATIISACTLLGNLNIAKTMHGFISKASVEIDDFVCSALLGMYGDSGSLDYA 119
           G+ PD++A++T++SAC LLG+L +AK MH FI K+ +E+D FV S L+  YG+ GSLDYA
Sbjct: 187 GLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYA 246

Query: 118 RCLFWEIYAKNIVVWNTMIHQCVKHESLDEARELFKKMP 2
              F E   KNIVVWNTMIHQ V+H +L+  ++LF+ MP
Sbjct: 247 YRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMP 285


>ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527930|gb|EEF30017.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 310

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/98 (37%), Positives = 62/98 (63%)
 Frame = -3

Query: 298 GIMPDLMALATIISACTLLGNLNIAKTMHGFISKASVEIDDFVCSALLGMYGDSGSLDYA 119
           GI PD + +AT+ISAC  LG L++ K +H ++ +   ++D ++ S+L+ MY   GSLD +
Sbjct: 168 GICPDEVTMATVISACAHLGALDLGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCGSLDRS 227

Query: 118 RCLFWEIYAKNIVVWNTMIHQCVKHESLDEARELFKKM 5
             +F+++  KN+  WN++I     H    EA E+F+KM
Sbjct: 228 LLVFFKLQEKNLFCWNSVIEGLAAHGYAKEALEMFRKM 265


>ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87162577|gb|ABD28372.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499174|gb|AES80377.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 755

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/97 (43%), Positives = 57/97 (58%)
 Frame = -3

Query: 295 IMPDLMALATIISACTLLGNLNIAKTMHGFISKASVEIDDFVCSALLGMYGDSGSLDYAR 116
           I+ D+  +ATIISAC   G L   K +H +I K  + ID +V S+L+ MY  SGSLD A 
Sbjct: 379 IVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDAL 438

Query: 115 CLFWEIYAKNIVVWNTMIHQCVKHESLDEARELFKKM 5
            +F +I   N+V+W +MI  C  H    EA  LF+ M
Sbjct: 439 MIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGM 475


>ref|XP_002301860.1| predicted protein [Populus trichocarpa] gi|222843586|gb|EEE81133.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/98 (38%), Positives = 60/98 (61%)
 Frame = -3

Query: 298 GIMPDLMALATIISACTLLGNLNIAKTMHGFISKASVEIDDFVCSALLGMYGDSGSLDYA 119
           GI PD + +AT+ISAC  LG L++ K +H +I +    +D ++ SAL+ MY   GSLD +
Sbjct: 238 GISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRS 297

Query: 118 RCLFWEIYAKNIVVWNTMIHQCVKHESLDEARELFKKM 5
             +F+++  KN+  WN++I     H   +EA  +F KM
Sbjct: 298 LLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKM 335