BLASTX nr result

ID: Cimicifuga21_contig00041364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00041364
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]    91   1e-16
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   3e-16
emb|CBI29512.3| unnamed protein product [Vitis vinifera]               89   3e-16
emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]    89   3e-16

>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/99 (50%), Positives = 74/99 (74%)
 Frame = -3

Query: 298 RKDLGKSRLIMIGSCNLKTGLRLQIEPELLQRDFVLSVGSNRELVTFIDGRLIPSNKALA 119
           R D  K  L+ IGS NLKTGL++Q+ PELLQ+D +L+V   +ELV F  G+L+ SN+ALA
Sbjct: 341 RMDQEKRLLVPIGSNNLKTGLKIQVMPELLQKDSILTVKHKQELVMFRSGKLLLSNRALA 400

Query: 118 KVIHGYQRHGKVGELSKLLVNIQKESDVLGKIGLRADVL 2
           K+++GY+RHG+  +LSKLL+ +Q++  VLG+    +DV+
Sbjct: 401 KLVNGYRRHGRTTDLSKLLLCMQQDFHVLGQSSFCSDVI 439


>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/103 (49%), Positives = 73/103 (70%)
 Frame = -3

Query: 310 IPVDRKDLGKSRLIMIGSCNLKTGLRLQIEPELLQRDFVLSVGSNRELVTFIDGRLIPSN 131
           I  DR D  K+ L+ I S  LK GL+LQI PELLQ+D V  + S +EL+ F +G+ + SN
Sbjct: 75  IQKDRNDPHKTCLVPIESYYLKEGLKLQIVPELLQKDSVFKMDSKQELLLFRNGKYVLSN 134

Query: 130 KALAKVIHGYQRHGKVGELSKLLVNIQKESDVLGKIGLRADVL 2
           KALAK+I  Y+R G++GELS+L++++QKE   L + GL +DV+
Sbjct: 135 KALAKLIIAYKRDGRIGELSRLMLSLQKELGTL-EGGLISDVI 176


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/100 (47%), Positives = 70/100 (70%)
 Frame = -3

Query: 301 DRKDLGKSRLIMIGSCNLKTGLRLQIEPELLQRDFVLSVGSNRELVTFIDGRLIPSNKAL 122
           DR +  K+ L  IGS +L+ GL++QI PELLQ+D V  + S +ELV F +G+ + SNKAL
Sbjct: 120 DRNESYKTCLGPIGSYHLREGLKIQIVPELLQKDSVFKMDSKQELVLFSNGKYVLSNKAL 179

Query: 121 AKVIHGYQRHGKVGELSKLLVNIQKESDVLGKIGLRADVL 2
            K++  YQ  G++GELS+L++++QKE   L   GL +DV+
Sbjct: 180 VKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISDVI 219


>emb|CBI29512.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/100 (47%), Positives = 70/100 (70%)
 Frame = -3

Query: 301 DRKDLGKSRLIMIGSCNLKTGLRLQIEPELLQRDFVLSVGSNRELVTFIDGRLIPSNKAL 122
           DR +  K+ L  IGS +L+ GL++QI PELLQ+D V  + S +ELV F +G+ + SNKAL
Sbjct: 87  DRNESYKTCLGPIGSYHLREGLKIQIVPELLQKDSVFKMDSKQELVLFSNGKYVLSNKAL 146

Query: 121 AKVIHGYQRHGKVGELSKLLVNIQKESDVLGKIGLRADVL 2
            K++  YQ  G++GELS+L++++QKE   L   GL +DV+
Sbjct: 147 VKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISDVI 186


>emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
          Length = 854

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/100 (47%), Positives = 70/100 (70%)
 Frame = -3

Query: 301 DRKDLGKSRLIMIGSCNLKTGLRLQIEPELLQRDFVLSVGSNRELVTFIDGRLIPSNKAL 122
           DR +  K+ L  IGS +L+ GL++QI PELLQ+D V  + S +ELV F +G+ + SNKAL
Sbjct: 515 DRNESYKTCLGPIGSYHLREGLKIQIVPELLQKDSVFKMDSKQELVLFSNGKYVLSNKAL 574

Query: 121 AKVIHGYQRHGKVGELSKLLVNIQKESDVLGKIGLRADVL 2
            K++  YQ  G++GELS+L++++QKE   L   GL +DV+
Sbjct: 575 VKLVIAYQGDGRIGELSRLMLSLQKELGTLEGGGLISDVI 614


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